LOCUS       DASUDT010000001         2502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2054582, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000001 DASUDT010000000
VERSION     DASUDT010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054582"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VFV26_00005"
     CDS             complement(<1..413)
                     /locus_tag="VFV26_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844565.1"
                     /translation="MGSRNPNKEDPEAIRMAFQRLCEAEGVVQLAFGAFKGEFRLLAE
                     TPDRIVLGVSDLERGQWRLKAGSRLTLTLLDRGLPYEAVVEFAGHGHLHQAEACHFGL
                     PRLLRALDTHRLADFVPDRPIPCAFSDQHNDVKDGR"
     gene            complement(443..1381)
                     /gene="meaB"
                     /locus_tag="VFV26_00010"
     CDS             complement(443..1381)
                     /gene="meaB"
                     /locus_tag="VFV26_00010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEX4844566.1"
                     /translation="MPSSADLLEPLRRGEARAIGRAMSWMENGHPEARGLMARLWPHL
                     GGASVIGITGPPGAGKSTLTDQLARTLRAEGQKVGILAVDPTSPFSGGAILGDRIRMQ
                     RIAADPGVFIRSMATRGALGGLARATQDAIDILDAAGFGTILVETVGVGQDEVDVVAC
                     VQTCCVVLVPGMGDEIQAIKAGIMEVADLFVINKADRDGADQVERELEAMKSLAPARD
                     WDPPVLRTVAQQGSGVAELLAGTREHGAWLRAHGGLERKARERARLRFDALLAEAVLR
                     QARAQAGPARIEAAIQAIASRSQDPYTAVAEILGGA"
     gene            1566..1889
                     /locus_tag="VFV26_00015"
     CDS             1566..1889
                     /locus_tag="VFV26_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844567.1"
                     /translation="MRLTKRAPVAPPDPKAPREKICAECGLHFKVETGQKFYLCPDCY
                     RRSFVYKRNGGKEAARILAQITCAACGAQEYLPFVPEDPAKALCRACFAKERPEPKAP
                     PRHSR"
     gene            1909..>2502
                     /locus_tag="VFV26_00020"
     CDS             1909..>2502
                     /locus_tag="VFV26_00020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844568.1"
                     /translation="MRLAILPLLFGAALLSAQGPASIKPTAQKAAPKPDPTSETARRA
                     FLQVLDAVDAGWFGQPYQGITSVEMQGTLGIALSGAAVNQKVDSLSQGQVKGNSQGGQ
                     ANLRLKGTYFANGDFRTDLAGDFGTLLYTRRGDRGFLYSKEQNAYTTRVNLAPSDAPT
                     TYMAWFRQTLNDIKAVYIDAPTFKASLAGEETSGGRTL"
BASE COUNT          379 a          938 c          844 g          341 t
ORIGIN      
        1 cggccgtcct tcacgtcgtt gtgctggtcg gaaaaggcgc aggggatggg gcggtccggc
       61 acgaagtccg cgaggcggtg ggtgtccagg gccctgagca ggcggggcag gccgaagtgg
      121 caggcctccg cctggtggag gtggccatgc ccggcgaatt ccaccacggc ctcatagggc
      181 agcccccggt ccagcagggt caacgtaagc cgcgatccgg ccttcaggcg ccactgcccc
      241 cgctccagat ccgacactcc caggacgatg cggtccgggg tctccgccag cagccggaac
      301 tcgcccttga aggcgccgaa ggccagctgc acgacacctt cggcctcgca caggcgctgg
      361 aacgccatgc ggatggcctc gggatcttcc ttgttgggat tgcgggaacc catgcctgtc
      421 tatcgggcgt tcccgccggg actcaagccc cgcccagaat ctccgccacc gcggtatagg
      481 ggtcctggct ccggctggcg atggcctgga tggcggcctc gatgcgggcg ggccccgcct
      541 gggcgcgggc ctgtcgcagc acggcctcgg ccaggagggc gtcgaagcgc agccgggccc
      601 gctcccgggc cttccgctcc agaccgccgt gggcgcggag ccaggcgccg tgctcccgcg
      661 tccccgccag cagctccgcc acgccgctcc cctgctgggc cacggtgcgg agcaccggcg
      721 gatcccagtc ccgggcgggg gccagggact tcatggcctc cagctcccgc tccacctggt
      781 cggcgccgtc gcggtccgcc ttgttgatca cgaagagatc cgccacttcc atgatgccgg
      841 ccttgatggc ctggatctcg tcgcccatgc cgggcaccag caccacgcag caggtctgga
      901 cgcaggccac cacgtccacc tcgtcctggc ccacccccac ggtctccacg aggatggtgc
      961 cgaagcccgc ggcatccagg atgtcgatgg catcctgcgt ggcccgggcc aggcccccca
     1021 gggcgccgcg cgtggccatg ctccggatga agacgccggg atccgccgcg atgcgctgca
     1081 tgcggatgcg gtcgcccagg atggcgccgc cgctgaaggg cgaggtggga tccacggcga
     1141 ggatgcccac cttctggcct tcggcccgca gggtccgggc cagctggtcg gtgagggtgc
     1201 tcttgcccgc ccccggcgga cccgtgatgc cgatcacgga tgccccgccc aggtggggcc
     1261 agagccgggc catgagcccg cgggcttcgg ggtggccgtt ctccatccag gacatggccc
     1321 ggccgatggc gcgggcctct ccgcggcgca ggggctccag gaggtcggca gaggaaggca
     1381 tgggcccagg atgccagaac ggcggcctcc aggctcctgc ctcgcaggcg ggagctgctt
     1441 gcagtaacct ggagcttccg gcccgggccg cagtaggacc atccacgatg atcaaagggc
     1501 tgaaagcctc gaaagccccc ggctccgggg atgcggctcc ggaaacggga tccgccaagc
     1561 ctgccgtgcg cctgaccaag cgggcgccgg tggccccgcc ggatcccaag gctccgcggg
     1621 agaagatctg cgccgagtgc ggcctgcact tcaaggtgga gaccggccag aagttctacc
     1681 tctgccccga ctgctaccgg cgctccttcg tctacaagcg gaacgggggc aaggaggcgg
     1741 cgcgcatcct ggcccagatc acctgcgccg cctgtggagc ccaggagtac ctgcccttcg
     1801 tgcccgagga tccggccaag gccctctgcc gcgcctgctt tgccaaggag cggccggaac
     1861 cgaaggcccc gccccggcac tcccgttgat gaccgaggag atctgctgat gcgtcttgcg
     1921 atcctgcccc tgctgttcgg tgccgccctc ctgtccgccc agggccccgc cagcatcaag
     1981 cccacggccc agaaggccgc gcccaagccc gaccccacgt ccgaaaccgc ccgccgggcc
     2041 ttcctccagg tgctggatgc cgtggatgcg ggctggttcg gccagcccta ccagggcatc
     2101 acctccgtgg agatgcaggg caccctcggc atcgccctca gcggggccgc cgtgaaccag
     2161 aaggtggaca gcctcagcca gggccaggtc aagggcaaca gccagggcgg ccaggccaac
     2221 ctgcgcctca agggcaccta cttcgccaac ggcgacttcc gcacggacct ggccggggac
     2281 ttcggcaccc tgctctacac ccgccgcggc gaccggggct tcctctacag caaggagcag
     2341 aacgcctaca ccacccgcgt gaacctggcg ccttccgacg cccccaccac ctacatggcc
     2401 tggttccgcc agaccctgaa cgacatcaag gcggtctaca tcgacgcgcc caccttcaag
     2461 gccagcctgg ccggcgagga aaccagcggc ggccggaccc tc
//
LOCUS       DASUDT010000002         3303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1767510, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000002 DASUDT010000000
VERSION     DASUDT010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767510"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VFV26_00025"
     CDS             <1..186
                     /locus_tag="VFV26_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844569.1"
                     /translation="GQGGDVVPIPGTKRRDRLEENLGALDHVLCPGELQELNGLFPPG
                     AAAGTRYPEAAMHMVSR"
     gene            246..1910
                     /gene="hutU"
                     /locus_tag="VFV26_00030"
     CDS             246..1910
                     /gene="hutU"
                     /locus_tag="VFV26_00030"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: protein motif:HMM:TIGR01228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEX4844570.1"
                     /translation="MTTASDALVVTAPRGTHLHCKGWVQEAALRMLMNNLDPEVAERP
                     EDLVVYGGLGKAARNWDCFHAIVKELKHLNDDETLLVQSGKPVGVVKTHPDAPRVLIA
                     NSNLVPKWATWEVFRELDQKGLMMYGQMTAGSWIYIGSQGIVQGTYETFAEAARQHFN
                     GTLAGTWTLTAGLGGMGGAQPLSVTMNGGVALCIEVDQTRIQKRLDTRYLDEWTDNLD
                     TALALVQQYVDAHEPRSIGLLGNAAEILPEILKRGFQPDLVTDQTSAHDEYNGYIPAG
                     LSLEQAAAMRKAEPEAYVARALASMRTHVEAMVEFQRRGAVTFDYGNNIRAQAKRAGF
                     ENAFAFPGFVPAFIRPLFCKGIGPFRWAALSGDPEDIAVTDAAMMELFPENEGMIRWL
                     KAAKEKIAFQGLPARICWIGAGERHLAGLKFNELVRTGKVKAPIVIGRDHLDSGSVAS
                     PNRETEAMKDGSDAVSDWPLLNAMTAASGGASWVSFHHGGGVGMGFSQHSGVVIVADG
                     TERADRCIARVLWNDPAMGVFRHADAGYDTAREHAEAIGLHIPMKA"
     gene            2017..2415
                     /locus_tag="VFV26_00035"
     CDS             2017..2415
                     /locus_tag="VFV26_00035"
                     /inference="COORDINATES: protein motif:HMM:NF036804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
                     /protein_id="HEX4844571.1"
                     /translation="MSRPCPCTSKKPYDRCCGPFHAGKAAPETAELLMRSRFSAYALG
                     KVDYLISTRPEAKRPEENREELAVYCQSVSCVGLKIIRKELGGKADDTGVVTFHASLQ
                     ANGRRTLHIETSTFARENGRWVYVDGVVKE"
     gene            2630..>3303
                     /locus_tag="VFV26_00040"
     CDS             2630..>3303
                     /locus_tag="VFV26_00040"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844572.1"
                     /translation="MDDDPLACRNVQAMLEHGYYQVETAAGGLEALAKVQAWNPELVL
                     LDIQMPDIDGLEVCRRIREMQQNDLLPIIFLTGDERPDIHSLAFQVKGDDFLRKPVIR
                     GELIVRIRSLMRLKRLQAEVQEERDTLLDLQKQREQLFQFIVHDLKNPLTAIQVGLEL
                     LEEGGGKGPTPRTQVQRLRETAHGMGRMIQNILDIGRAEQVGLDLRKVRISLGTWIPG
                     LLKEVES"
BASE COUNT          608 a         1169 c         1022 g          504 t
ORIGIN      
        1 ggccagggcg gggatgtcgt ccccattccc ggcaccaagc gccgggatcg cctggaggag
       61 aacctgggcg ccctcgacca cgtgctttgt cccggcgagc tccaggaact gaacggcctc
      121 ttcccgcccg gggccgccgc gggcacccgc tatcccgaag ccgccatgca catggtgagc
      181 cgctgaagcg tgcctgacgg cactcgccct tcgtgggaaa ctagggggtt ccgccggagt
      241 cccccatgac caccgcctct gatgccctcg tcgtcaccgc gccccgcggc acccacctgc
      301 attgcaaggg ctgggtgcag gaggcggcgc tgcgcatgct catgaacaac ctggatcccg
      361 aggtggccga gcggcccgag gatctggtgg tctatggcgg cctgggcaag gccgcccgga
      421 actgggactg cttccacgcc atcgtgaagg agctgaagca cctcaacgac gacgagaccc
      481 tgctggtgca gagcggcaaa cccgtgggcg tggtgaagac ccacccggac gcgccccgcg
      541 tcctcatcgc caactcaaac ctggtgccca agtgggccac ctgggaggtc ttccgcgaac
      601 tggatcagaa gggcctgatg atgtacggcc agatgaccgc cggcagctgg atctacatcg
      661 gcagccaggg catcgtgcag ggcacctacg agaccttcgc cgaggcggcc cgccagcact
      721 tcaacggcac cctggccggc acctggaccc taaccgccgg cctgggcggc atgggcggcg
      781 cccagcccct ctccgtcacc atgaacggcg gcgtggccct ctgcatcgag gtggaccaga
      841 cccgcatcca gaagcgcctg gatacccgct acctcgatga atggaccgac aacctggaca
      901 cggccctggc cctggtgcag cagtatgtgg acgcccacga accccgcagc atcggcctgc
      961 tgggcaacgc cgcggagatc ctccccgaga tcctcaaacg cggcttccag ccggacctcg
     1021 tcacggacca gaccagcgcc cacgacgaat acaacggcta catccccgcc gggctctccc
     1081 tggagcaggc cgccgcgatg cggaaggctg agcccgaggc gtacgtcgcg cgggccctgg
     1141 cctccatgcg gacccatgtg gaagccatgg tcgagttcca gcgccgcggc gccgtgacct
     1201 tcgactacgg caacaacatc cgggcccagg ccaagcgcgc gggtttcgag aatgccttcg
     1261 cattcccggg cttcgtgccc gccttcatcc ggcccctgtt ctgcaagggc atcggcccct
     1321 tccgctgggc agccctgtcg ggtgaccccg aggacatcgc cgtcaccgac gccgccatga
     1381 tggagttgtt ccccgagaac gagggcatga tccgttggct caaggccgcc aaggagaaga
     1441 tcgccttcca gggcctgccc gcccgcatct gctggatcgg cgccggcgag cgccacctgg
     1501 cgggcctcaa gttcaacgag ctggtccgca cgggcaaggt gaaggccccc atcgtcatcg
     1561 gccgcgacca cctggatagc ggcagcgtgg ccagccccaa tcgcgagacc gaggccatga
     1621 aggacggctc cgatgccgtc agcgactggc cgctgctcaa cgccatgacc gccgcttccg
     1681 gcggcgcctc ctgggtgagc ttccaccacg gcggcggcgt gggcatgggc ttcagccagc
     1741 acagcggcgt ggtcatcgtg gccgacggca ccgagcgcgc ggaccgctgc atcgcccgcg
     1801 tcctctggaa cgaccccgcc atgggcgtct tccgccatgc cgacgccggc tacgacaccg
     1861 cccgcgaaca cgccgaagcc atcggattac atatcccgat gaaggcttga acagcctttt
     1921 ctgccacaga tgaacacgga tgaactcaga taaagctgga actcccgaca tccgtgttca
     1981 tctgtgttca tccgtggcta attcctgagg ttcaccatgt cccgtccctg cccctgcacc
     2041 tccaagaaac cctatgaccg ctgctgcggg cccttccatg cgggcaaggc ggcgccggag
     2101 acggccgaac tgctcatgcg ctcgcggttt tccgcctacg ccctcggcaa ggtggactac
     2161 ctgatctcca cccgtcccga ggccaagcgg cccgaggaga accgggagga actggcggtc
     2221 tactgccagt ccgtcagttg cgtgggcctg aagatcatcc gcaaagaact ggggggcaag
     2281 gccgatgaca ccggcgtcgt caccttccac gccagcctcc aggccaacgg ccgccgcacc
     2341 ctccacatcg agaccagcac cttcgcccgg gagaacggcc gctgggtcta cgtggatggc
     2401 gtggtgaagg aataatccgg ccgggaggtc tccggaactc ccccaagaga ccctccgccc
     2461 ccccgggcca ggccccaggc ccagggtcct ttatctgcat tcatctggga attaacacgc
     2521 cgaaacttca gacctctaca agccatcccg aatcaatgtc ctgaggtcag cgatggatgg
     2581 tgcgcccttt catactcgcc gtgcggatca tggcgcccgg atcctggtgg tggatgacga
     2641 tcccctggcc tgccgaaacg tgcaggccat gttggagcac ggctactacc aggtggaaac
     2701 cgcagcggga ggcctggagg ccctcgccaa ggtccaggcc tggaatccgg aactggtcct
     2761 cctcgacatc cagatgcccg acatcgatgg gctggaagtc tgccgccgga tccgcgagat
     2821 gcagcagaac gacctcctgc ccatcatctt cctgaccggc gatgaacgcc ccgatatcca
     2881 ctcattggcc ttccaggtga agggggatga cttcctccgg aagccggtca tccgggggga
     2941 gctcatcgtc cggatccgca gcctcatgcg gctcaaacgc ctccaggcgg aggttcagga
     3001 ggagcgggat accctgctgg acctccagaa acagcgggaa cagctcttcc agttcatcgt
     3061 gcacgacctg aagaaccccc tgacggccat ccaggtgggc ctggaacttc ttgaggaagg
     3121 aggcggcaag ggccccaccc cccgaaccca ggtgcagcgg ctccgggaaa ccgcacatgg
     3181 gatggggcgg atgatccaga acatcctcga catcgggcgt gccgaacagg ttggcctgga
     3241 cctccggaag gtccggatct ccctcggcac ctggatcccg ggcctgctca aggaagtgga
     3301 atc
//
LOCUS       DASUDT010000003         2431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1988418, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000003 DASUDT010000000
VERSION     DASUDT010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988418"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..953
                     /locus_tag="VFV26_00045"
     CDS             123..953
                     /locus_tag="VFV26_00045"
                     /inference="COORDINATES: protein motif:HMM:NF013575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HEX4844573.1"
                     /translation="MAVKPASFAAFRLLVEYDGSRFQGWQKQGPKQSREGVRTVAGSL
                     EHAIHEAGLKLVYLGGAGRTDAGVHALGQVAHLHLEAKGAPRPGELRRILESALPQDI
                     ALRDVRTCQPRFHARHDAADRTYQYQISRRRSAFGKPWIWWVKRPLDLDRLAKAWSAF
                     EGDQDLSAFADLDSEEDGRSRIFRCETAESGSLILLRVRATHFFRRQVRRMVGAAVAC
                     ALGEEEPRRVQEDLRNPTEAANLYWGAKAAPASGLFLEAVRYPGDPEPTPMRPTIFVP
                     "
     gene            963..1520
                     /locus_tag="VFV26_00050"
     CDS             963..1520
                     /locus_tag="VFV26_00050"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX4844574.1"
                     /translation="MLTRDEAWTLLCAWTPSDKLRTHARAVELVMRDLAAKLGEDVER
                     FGLAGLLHDADYDSWPEEHPKRIVAWLRERGDEDLAHAISAHYTRWNVPYDHLLDKAL
                     LASDEITGFVMACALVRPTRTEGLEPRSVKKKLKDKAFAAGVDRFEVAEGFHMLMEAV
                     GGTEDEHLARIIAVLHEHRAELGLV"
     gene            complement(1708..>2431)
                     /locus_tag="VFV26_00055"
     CDS             complement(1708..>2431)
                     /locus_tag="VFV26_00055"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX4844575.1"
                     /translation="LKVAFLGFTDLFNLDLNRKATEPWVRPLDLEPALAAVREARSRA
                     DLVVVSVHWGNEYQRQPTKRQRDIARLLAGAGCDLLLGHHPHVLQPAELLEADGRKVL
                     VAYSLGNFISNQDRMYRADLFPVAGGDNRDGAALQAVFEQRQDASGKPRMVLAETSFE
                     PLWTENNWGVPAARREIRVIRVAAAEARVRAEVEALSVPQEGPEAPARRAALLERQEY
                     LRTLILRRKRIAETLGEAFAAR"
BASE COUNT          379 a          899 c          825 g          328 t
ORIGIN      
        1 gccatgttcg gggaccggga gaaatacctg gaactgaccg gcgccgaggg ctacatcgcc
       61 aagcccatcc acgaccccgc cgcactcatc gaggccgtga aggccatcac cgggggttga
      121 gcatggccgt gaaacccgca tccttcgccg ccttccgcct gctggtggaa tacgacggca
      181 gccgcttcca gggctggcag aagcagggac cgaagcagtc ccgggaaggc gtccgcaccg
      241 tggccggcag cctggaacac gccatccacg aggccggcct gaagctggtc tacctgggcg
      301 gcgccggccg cacggatgcc ggcgtccatg ccctgggcca ggtggcccac ctgcacctgg
      361 aggccaaggg cgccccccgc cccggagagc tgcgccgcat cctggaatcc gccctgcccc
      421 aggacatcgc cctccgcgat gtgcgcacct gccagccgcg cttccacgcg cggcatgacg
      481 ccgcggaccg cacctaccag taccagatca gccgccgccg cagcgccttc ggcaagccct
      541 ggatctggtg ggtgaagcgc cccctcgacc tggaccgcct ggccaaggcc tggagcgcct
      601 tcgagggcga ccaggatctg agcgccttcg cagacctgga ttccgaggag gatggccgca
      661 gccggatctt ccgctgcgaa accgccgaga gcggatcgct catcctgctg cgcgtgcggg
      721 ccacccactt cttccgccgc caggtgcggc gcatggtggg cgcggccgtg gcctgcgccc
      781 tgggcgaaga ggagccgcgc cgggtccagg aggacctccg caaccccacc gaggccgcca
      841 acctctactg gggggccaag gcggcccctg cctcgggcct cttcctggaa gccgtgcgct
      901 atcccggcga tcccgagccc acgcccatgc gccccacgat cttcgtaccc tgaggacgcc
      961 cgatgctgac ccgtgacgaa gcctggaccc tgctctgcgc atggacgccg tccgacaagc
     1021 tccggaccca tgcccgggcc gtggagctgg tcatgcgcga cctggccgcg aagctggggg
     1081 aggatgtgga gcgcttcgga ctggcgggcc tgctccacga tgcggactac gacagctggc
     1141 ccgaggagca tccgaagcgc atcgtcgcct ggctgcggga acgcggcgac gaggacctgg
     1201 cccatgccat cagcgcccac tacacccgct ggaacgtgcc ctacgatcac ctgctcgaca
     1261 aggccctcct ggcctcggac gagatcaccg gcttcgtcat ggcctgcgcg ctggtgcggc
     1321 ccacccgcac cgagggcctg gagcccagga gcgtgaagaa gaagctcaag gacaaggcct
     1381 tcgccgcagg cgtggaccgc ttcgaagtgg ccgagggctt ccacatgctc atggaggccg
     1441 tgggcggcac cgaagacgag cacctggccc gcatcatcgc cgtgctgcac gagcaccgcg
     1501 cggaactcgg cctggtctag ggtctgtttt caaagtggat gcgagccgcg acgccgtcca
     1561 gccgcgcgca tggccaggcg gcggctgaag ggcgatgcgg gacatcgttc gaggccgcca
     1621 acgcagccag gggtgcggct gggcggcgtc ccggagggca aggggcggcg ccccttgcgc
     1681 ggccacaccc cactttgaaa acagacccta gcgtgcggcg aaggcctcgc ccagggtctc
     1741 cgcgatgcgc ttccgccgca ggatgagcgt gcgcaggtat tcctgcctct ccagcagcgc
     1801 cgcccgccgg gccggggcct ccggcccttc ctgcggaacc gacagggcct ccacctccgc
     1861 ccgcacccgg gcctcggcag cggccacgcg gatgacgcgg atctcccgtc tcgcggcggg
     1921 gacgccccag ttgttctcgg tccacagggg ctcgaaggag gtctcggcca ggaccatgcg
     1981 cggcttcccc gaggcgtcct gccgctgctc gaacacggcc tggagcgcgg cgccatcgcg
     2041 gttgtccccg cccgccaccg gaaagaggtc ggcccggtac atgcggtcct ggttgctgat
     2101 gaagttgccc agggaatacg ccaccaggac cttccgcccg tcagcctcca gcagctccgc
     2161 aggctggagc acgtggggat ggtggcccag cagcagatcg cagcccgccc ccgccagcag
     2221 cctcgcgatg tcccgctgcc gcttcgtggg ctggcgctgg tactcgttgc cccagtggac
     2281 gctcaccacc accaggtcgg cgcgggagcg ggcctcccgc acggcggcca gcgccggctc
     2341 aaggtccagg gggcgcaccc agggttccgt cgccttccgg ttcaggtcca ggttgaagag
     2401 gtccgtgaag cccaggaagg ccaccttgag g
//
LOCUS       DASUDT010000004         3408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1016473, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000004 DASUDT010000000
VERSION     DASUDT010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016473"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VFV26_00060"
     CDS             <1..1027
                     /locus_tag="VFV26_00060"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX4844576.1"
                     /translation="CPCALGLATPVAVMVGLGAAARKGVLVRDAAALEALGQATDLAF
                     DKTGTLTEGRPRLRRTLAVADLAEADLLGLAASLERDSEHPIARGLVAAHAAALKPVA
                     AFRTHPGGGVSGEIEGRPWRLGSAAFLDVTFPEVDEDGIAVGLADATGLKGVFVLGDR
                     LRPESAAVAGQLRRQGLRLHLFTGDRAEPAARMAAAVGIESISAGLRPEEKLHRIRDL
                     QAQGAVVGFVGDGVNDAPALAQADCGIAMGSGAGEQGTGAAMAAAPLVLLRPGLEPIL
                     AARRLALRTHRVIRQNLGWAFGYNLVLVPLAAFGQLERFGGPMLAGVAMGLSSLTVVL
                     NALRLRR"
     gene            complement(1586..>3408)
                     /gene="mutS"
                     /locus_tag="VFV26_00065"
     CDS             complement(1586..>3408)
                     /gene="mutS"
                     /locus_tag="VFV26_00065"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX4844577.1"
                     /translation="AHLQGVSLELGAAGPLLDATSARHLEVFANGLDGGRQGSLLALL
                     DQCRTRLGSRQLKAWLEQPLRDRPSLERRWSQVAWLTEDRRRTPIQTLLAQVPDLDRL
                     LGRVALGLATPPELAQLREGLAVLQKLPARIQDEGWASEVAELGLWPCDTPLCTPLHT
                     ELQRVLAEAPPLDLEKGGVIREGVDAELDAVRRLARDAKQVMLELEEEERAASGINSL
                     KIKYNRVFGYYFEITKANLGAVPAHFLRKQTLANAERFTTEKLVAFEQRLLSAESDQG
                     RLEALQFQRLLALVLEHRADLTRLARAVAALDVLAALAERARLSGWTRPELGEDRELV
                     LASARHPMLEARLGRECIPNDLQFSAVQPMAVVTGPNMGGKSTFLRTAALLVVLAQTG
                     SFVPAELMRFGLVDRIFTRIGASDQLAKGQSTFMVEMTETARILNQATAASLVILDEI
                     GRGTSTRDGLALAEAIAVFLRDLKGGAPRTLFATHYFEMTKLADDARIQNLHVEVQEW
                     EEQLHFLHRVAPGPADRSYGIQVARLAGLPKAVIQKAQRLLAQAPEAPPRAPMPSQPA
                     LPLFEVEPDGLRGELEALDLSRMTPLEALNWLAMKQKERP"
BASE COUNT          444 a         1184 c         1280 g          500 t
ORIGIN      
        1 ctgcccctgc gccctgggcc tcgccacgcc cgtggccgtg atggtggggc tgggggccgc
       61 agcacggaag ggcgtgctgg tgcgcgacgc ggccgctttg gaggccctgg gccaggccac
      121 ggacctcgcc ttcgacaaga ccgggaccct cacggaaggc cggccgaggc tgcgccggac
      181 cctggcggtc gcggatctgg cggaggcgga cctgttgggc ctggccgcca gcctggagcg
      241 ggactccgaa caccccatcg cccggggtct ggtggcggcc cacgcggccg cattgaagcc
      301 ggtggcggcc ttccgcaccc acccgggcgg cggcgtcagt ggcgagatcg aggggcggcc
      361 ctggcggctg ggcagcgcgg ccttcctgga tgtgaccttc ccagaggtgg acgaggatgg
      421 gatcgccgtg ggcctggcgg acgccaccgg cctgaagggg gtgttcgtgc tgggcgaccg
      481 gctgcgaccg gaaagcgcgg cggtggccgg gcagctgcgc cgccagggcc tgcggctcca
      541 cctgttcacg ggagatcgtg cggaacccgc ggcgcggatg gcggcggcgg tggggatcga
      601 atccatttcg gcggggctgc gtccggagga gaagctccac cgcatccggg accttcaggc
      661 gcaaggcgcc gtggtgggtt tcgtggggga tggcgtcaac gatgcgccgg cgctggccca
      721 ggcggactgc ggcatcgcca tgggttccgg cgccggggag cagggcacgg gcgccgccat
      781 ggccgcggcc ccgctggtcc tgctgcggcc gggcctggaa cccatccttg cagcccgcag
      841 gttggcgctg cggacccatc gcgtgatccg ccagaacctg ggctgggcct tcggctacaa
      901 cctggtgctg gtgcccctgg cggccttcgg ccagctggag cggttcggcg ggcccatgct
      961 ggccggggtg gccatggggt tgagctcgct cacggtggtg ctgaatgccc tgcggctgcg
     1021 gcgctgagag tgcctaacaa aacccccaca gggccgcgcg agggtcgccg ggcgagcgag
     1081 gcgaggaacg cgaggagacg cgtagcgggt actacgcgcg acgagcgtga cgcggcatcg
     1141 cgacgcccgc cggccctcgc ccggagggag aaagccaggt gggcgccccg cggcgtcagg
     1201 gcccctggct cggacctgtg gtcctcgggg ctgcgccccc gccctcggct acgccgctgc
     1261 ggccctatcc gcttcgcgga tggtgaacga tgtcccgcat ggccctgcgg gctcttcctt
     1321 gcggtgcatc ccacctggct ttctcgcggc cctgtcgggg ttttgctagg cactctaaag
     1381 gccaggttgt ccagcttgtg gcccgtcgtg gcgcagtgga tgatgagcgc cccgtccacc
     1441 accgcgtggt tcacgggcac cgcgtagggc cagccctcgg cgtccaccgt ggccagcacg
     1501 ccccattccg cctcctcgag cagggccatg gccgcggcct catccagggc ccggtcccgg
     1561 cggcggatgg ggtgggcggg tgcgctcatg gccgctcctt ctgcttcatg gccagccagt
     1621 tcagcgcctc caggggcgtc atgcggctga ggtccagggc ctccagttcg ccgcgcagtc
     1681 cgtccggttc cacttcgaac agcggcaggg ccggttggct gggcatgggc gcccggggcg
     1741 gcgcttccgg cgcctgggcc agcagacgct gggccttctg gatgaccgcc ttgggcaggc
     1801 ccgccaggcg cgccacctgg atgccgtagc tgcggtccgc ggggcccggc gccacgcggt
     1861 ggaggaagtg cagctgttcc tcccactcct gcacctccac gtggaggttc tggatgcggg
     1921 catcatcggc cagcttggtc atctcgaagt agtgcgtggc gaagagcgtc cggggcgcac
     1981 cccccttgag gtcccgcagg aacaccgcga tggcctccgc cagggccagg ccgtcccggg
     2041 tggaggtgcc gcggccgatc tcgtccagga tcaccaggct ggccgccgtg gcctggttga
     2101 ggatccgcgc cgtctccgtc atctccacca tgaaggtgga ctggcccttg gccagctggt
     2161 ccgaggcgcc gatgcgggtg aagatgcggt ccaccagccc gaagcgcatg agttcggcgg
     2221 gcacgaagga tccggtctgg gccagcacca ccagcagggc cgccgtgcgg aggaaggtgg
     2281 acttgccgcc catgttgggc cccgtcacca cggccatggg ctggacggcg ctgaactgca
     2341 ggtcgttggg aatgcactcg cggcccaggc gcgcctccag catgggatgg cgggcggagg
     2401 ccagcaccag ctcccggtcc tcgcccagct ccggccgcgt ccagcccgac agccgggccc
     2461 gctccgccag ggccgccagc acatccaaag cggccacggc ccgggccagc cgcgtgaggt
     2521 ccgcgcgatg ctccagcacc agggccagca ggcgctggaa ctggagcgct tccaggcgac
     2581 cctggtcgct ctcggcgctc aatagccgct gctcgaaggc caccagcttc tcggtggtga
     2641 agcgctcggc gttggccagg gtctgcttgc ggaggaagtg ggcgggcacc gcgcccaggt
     2701 tggccttggt gatctcgaag tagtagccga acacccggtt gtacttgatc ttcaggctgt
     2761 tgatgccgga ggccgcccgt tcttcttctt caagctccag catcacctgc ttggcatccc
     2821 gggccaggcg gcgcacggcg tccagctcgg catccacgcc ctcgcggatg acgccgccct
     2881 tctccaggtc caggggcgga gcttcagcga ggactcgctg aagctccgta tgcaaaggcg
     2941 tgcaaagggg cgtgtcgcag ggccacaggc ccagctcagc cacctcagag gcccagcctt
     3001 cgtcctggat gcgggcgggc agcttctgga gcacggccag tccttcccgg agctgggcca
     3061 gctccggcgg ggtggcgagg cccagggcca cgcggcccag caggcggtcc aggtccggta
     3121 cctgggccag cagggtctgg atgggggtcc ggcggcggtc ctccgtgagc caggccacct
     3181 gcgaccagcg ccgctccagg ctcgggcggt cccgcagggg ctgctccaac caggccttga
     3241 gctgccgcga gcccaggcgg gtgcggcact ggtccagcag ggccagcaag gagccctggc
     3301 gcccgccatc caggccattg gcgaagactt ccaggtggcg ggcgctggtg gcgtccagca
     3361 ggggacccgc agcgcccagt tccagggaca cgccctggag gtgcgcgg
//
LOCUS       DASUDT010000005         3196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1789625, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000005 DASUDT010000000
VERSION     DASUDT010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789625"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /gene="nrfD"
                     /locus_tag="VFV26_00070"
     CDS             complement(<1..1052)
                     /gene="nrfD"
                     /locus_tag="VFV26_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX4844578.1"
                     /translation="MRTDAAQAGAIPEELIEPSLTVGKVTPGSLDDQVLAFPETRPPK
                     QWYVGLAITLTALFIGLGFIGYTFVTGIGAWGNNSPVFWAFDIINFVFWVGIGHAGTL
                     ISAILFLFRKRWRNAIARFAEAMTIFAVMCAVIFPLIHVGRPWLAFWLFPYPNERALW
                     TNFRSPLLWDVFAVNTYFSVSLMFWYLGLIPDIASMRDRTTSKLRKVIYTALALGWRG
                     AASHWQHYEKAYLLLAGLATGLVLSVHSVVSFDFATSVVPGWHMTIFPPYFVAGAIFA
                     GFAMVVMVLVVVRETMQLQNLITLRHLDVMNKVVLAMSCIMGYSYLMEGFTAWYSQNL
                     YLHHAFKNIISGTYGWA"
     gene            complement(1042..>3196)
                     /locus_tag="VFV26_00075"
     CDS             complement(1042..>3196)
                     /locus_tag="VFV26_00075"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4844579.1"
                     /translation="LKTAQDAINRLWVLEGPLTLTGTNADQRVPVAPSRLAAVAFALA
                     KELATKGVPLPPGSDLSGISAGAPAEIPQATWTSLVKDLQHAGRNAVALCGAQMPAEA
                     HQAAHLLNAMLGSEAVAAAPAEPLATVKDLDAAVQAMASGRYAAAIFWGVNPALTFPR
                     AAAWKEAAAKTPLRAWIGEVEDETAAQCQLLLPENHWLESWGDFSTPEAAVLQQPTVG
                     TLYDTKQGEDILLGILQALGAAAPASFHAYLQARWKKELPLGTTFEQALHDGLVKGAP
                     KAAVPVFKGASVAAAVKKAAEAKAVDFELVLFPGFATHDGRHANNSWLQETPDPITKM
                     TWDNPVSVSVQDAKALGIQEGDLVSLSVDGATLRLPAVIQPGQAKGTLALALGYGRAT
                     GGVAKGVGVNAFPLMGLDPATANVRPGARLAKAGGRKELSRTQSHHRMEGRDLVRSLT
                     MDEFLHGPKHHRHMPELVSLYEDQQFPDHKWGMVIDLAACVGCSACVVACQSENNVPV
                     VGPEQVAKGREMHWIRIDRYYEGELENPKVVHQPMLCQHCDSAPCENVCPVNATNHSP
                     DGLNQMAYNRCVGTRYCANNCPYKVRRFNFLEYTAYKTEPETLVNNPEVTVRPRGVME
                     KCSFCVQRINDVKIRAKGDGRAILDNEVTTACMAGCPSDAIVFGDLKNPNSRIAKLVG
                     DKRAYRVLEEVGAKPAITYLADLKNPAVEGGSHAH"
BASE COUNT          484 a          981 c         1209 g          522 t
ORIGIN      
        1 gcccacccgt aggtgcccga gatgatgttc ttgaaggcgt ggtggaggta gaggttctgg
       61 ctgtaccagg ccgtgaagcc ctccatcagg tagctgtagc ccatgatgca gctcatcgcg
      121 agcaccacct tgttcatcac atccaggtgg cgcagggtga tgaggttctg cagttgcatg
      181 gtctcgcgca ccaccaccag caccatcacc accatggcga agcccgcgaa gatggcgccc
      241 gccacgaagt agggcgggaa gatggtcatg tgccagcccg gcaccacgga ggtggcgaag
      301 tcgaagctca ccaccgagtg cacggagagc accaggccgg tggccaggcc cgccagcagc
      361 aggtaggcct tctcgtagtg ctgccagtgg gaggcggcgc cgcgccagcc cagggccagg
      421 gccgtgtaga tcaccttgcg gagcttgctg gtggtccggt cgcgcatgga ggcgatgtcg
      481 gggatcaggc ccaggtacca gaacatcagg gacacggaga agtaggtgtt caccgcgaag
      541 acgtcccaga gcaggggcga ccggaagttg gtccagagcg cccgctcgtt cggatagggg
      601 aagagccaga aggccagcca gggccgcccc acgtggatca gggggaagat gacggcgcac
      661 atgaccgcga agatggtcat ggcttcggcg aaccgggcga tggcgttgcg ccagcgcttg
      721 cggaagagga agaggatggc cgagatcagc gtgcccgcgt ggccgatccc cacccagaac
      781 acgaagttga tgatgtcgaa ggcccagaac acggggctgt tgttgcccca ggcgccgatg
      841 ccggtgacga aggtgtagcc gatgaagccg aggccgatga acagcgccgt cagggttatg
      901 gccaggccga cgtaccactg tttcggcggc ctggtctcgg ggaaggccag cacctggtcg
      961 tcgaggctgc cgggcgtgac cttgcccacg gtgagcgacg gctcgatcag ctcctcggga
     1021 atggcgccag cctgggcggc gtcagtgcgc atgggagcct ccctcgacgg cggggttctt
     1081 caggtcggcc aggtaggtga tggcgggctt ggcgcccact tcctccagca cccggtaggc
     1141 gcgcttgtcg cccaccagct tggcgatccg gctgttgggg ttcttgaggt cgccgaacac
     1201 gatggcgtcc gaggggcagc cggccatgca ggcggtggtg acctcgttgt cgaggatggc
     1261 tcggccatcg cccttggcgc ggatcttcac gtcgttgatg cgctgcacgc agaaggagca
     1321 cttctccatg acgccgcggg gccggaccgt gacctcgggg ttgttcacca gggtctcggg
     1381 ctcggtcttg taggcggtgt attccaggaa gttgaagcgg cgcaccttgt aggggcagtt
     1441 gttggcgcag tagcgggtgc ccacgcagcg gttgtaggcc atctggttca ggccgtcggg
     1501 gctgtggttg gtggcgttca ccgggcagac gttctcgcag ggcgcgctgt cgcagtgctg
     1561 gcagagcatg ggctggtgga cgaccttcgg gttctccagc tcgccctcgt agtagcggtc
     1621 gatgcggatc cagtgcatct cgcggccctt ggccacctgc tcggggccca ccaccggcac
     1681 gttgttctcg gactggcagg ccaccacgca ggcggagcag cccacgcagg cggcgaggtc
     1741 gatgaccatg ccccacttgt ggtccgggaa ctgctggtcc tcgtagagcg acaccagctc
     1801 gggcatgtgg cggtggtgct tggggccgtg gaggaactcg tccatggtga gggagcgcac
     1861 caggtcgcgg ccctccatgc ggtggtggct ctgggtgcgg gacagctcct tccggccgcc
     1921 ggccttggcg aggcgggcgc cgggccggac attggccgtg gcgggatcca ggcccatgag
     1981 ggggaaggcg ttgacgccca cgcccttggc cacgccgccg gtggcgcggc cgtagcccag
     2041 ggccagggcc agggtgccct tggcctggcc gggctggatg accgcaggca gcctgagggt
     2101 ggcgccgtcc acggagaggc tgacgaggtc gccctcctgg atgcccaggg ccttggcatc
     2161 ctgcacggac acggagacgg ggttgtccca ggtcatcttg gtgatgggat ccggggtctc
     2221 ctgcagccag ctgttgttgg cgtggcggcc atcgtgggtg gcgaagcccg ggaagagcac
     2281 cagctcgaag tccacggcct tggcctccgc ggccttcttc acagcggcgg ccacggaggc
     2341 gcccttgaac acggggacgg cggccttggg cgcgcccttc accaggccgt cgtgcagggc
     2401 ctgctcgaag gtggtgccga ggggcagttc cttcttccag cgggcctgca ggtaggcgtg
     2461 gaagctggct ggagcggcgg cgcccagggc ctggaggatg cccaggagga tgtcctcgcc
     2521 ctgcttggtg tcgtacaggg tgcccacggt gggctgctgg aggacggcgg cttcgggcgt
     2581 gctgaagtcg ccccagcttt ccagccagtg gttctccggc agcagcagct ggcactgggc
     2641 ggcggtctcg tcctccacct cgccaatcca ggcgcggagc ggggtcttgg cggccgcctc
     2701 cttccaggcg gcggccctgg ggaaggtgag ggccggattc acgccccaga agatcgcggc
     2761 ggcatagcgg ccggaggcca tggcctgcac ggcggcgtcg aggtccttca cggtggcgag
     2821 gggctcggcc ggggccgcgg ccacggcctc ggagcccagc atggcgttca gcaggtgcgc
     2881 ggcctggtgg gcctcggcgg gcatctgggc gccgcagagc gcgaccgcgt tccggccggc
     2941 gtgctgaagg tccttcacta gactggtcca ggtggcttgc ggaatttccg cgggtgcgcc
     3001 cgcggaaatt ccggacaaat cagaaccggg ggggagcggc acgcccttgg tcgccagttc
     3061 cttcgccagg gcgaaggcca cggcggccag gcgcgaaggc gccacgggca cgcgctggtc
     3121 ggcattggtg cccgtcaggg tcagggggcc ttccagcacc cagaggcggt tgatggcgtc
     3181 ctgtgcggtt ttcaac
//
LOCUS       DASUDT010000006        10993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_839844, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000006 DASUDT010000000
VERSION     DASUDT010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 10993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10993
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839844"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VFV26_00080"
     CDS             complement(<1..475)
                     /locus_tag="VFV26_00080"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX4844580.1"
                     /translation="MNDFALDDPSFYEDFLVEAQEHFEQIETNFLALEESPGDLDLLN
                     AIFRSVHTIKGAAGFLGLQKVQALAHVGENMLDDLRKSRMELSDRVMELLFEAVDMLK
                     VLVDDVRIQVRKQGEPEDPDPSELIRSLEAVRKGGVALPGSQAAGPATGTLHLPAP"
     gene            complement(472..2004)
                     /locus_tag="VFV26_00085"
     CDS             complement(472..2004)
                     /locus_tag="VFV26_00085"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX4844581.1"
                     /translation="MAAESTQALLASELVPSGQLVTFTLDGVEFGLDIDRVQEITHRT
                     DVTPVPGSPSFILGVINLRGLIIPVIDSRIRFHLAPQETTAKTRIIVLRLASGATGLQ
                     VDSVAEVVRLEDHTLRETPPLVAGIRAEYLAGMVTVGNRLITLIHLEKLLDSSELTRR
                     AEFEDLSLGGSLAMGSENYVEEAEQDGRPFVTFRLGAESFGIALHQVEEIVELPLVTK
                     VPDAPDYVMGVICLRDQVMPLIDLSEILSIEQGGAPRKRDMVVLLSFGTARIGVVVDE
                     IQEILRVLDEQVLPPPQTLSEAEREHLEGILLLPGRMVSLINVLKIITGDDQEKIAAM
                     GQGLGLSDSRAQETVPSLELVVFRLGPESYGLRLHEVREIIMVSQITPVPRAPQFVDG
                     VLNLRGEVMPVVDLRTRFGLERVEATSISRILITSIGGVFTGLVVDAVNEVRPVELSR
                     FGPPPSVTAVGANRYIEKVARLDNGMIFLLELQQLLTDAETGQLQNLQGRKAADHRTG
                     EP"
     gene            complement(2008..2619)
                     /locus_tag="VFV26_00090"
     CDS             complement(2008..2619)
                     /locus_tag="VFV26_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844582.1"
                     /translation="MDQSEIDALLAGGGKPPKKPKAAAKAPAAAAPAPKPVQPSPPAA
                     GAGPHKDGAGHVIAELDTVTAVTERESNKVMDQLDQISRLVARQQQLITGMMQHEGAQ
                     SPGVQQAIHEVMGAGKEIQDKVFEAMDLMQFQDITRQKLERIVHHLRQIHDYIVELLG
                     TGLKSEAERPSISHTIAQTGTTPDENKAHADSVIEAFKSQKKG"
     gene            complement(2630..2986)
                     /locus_tag="VFV26_00095"
     CDS             complement(2630..2986)
                     /locus_tag="VFV26_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844583.1"
                     /translation="MKILIVDDSSTMRRIIINTLSRIGYTDVVEAEHGKSGLEKLGQG
                     GVEMIITDWNMPEMDGLEFVKTVRGQNAAIPILMVTTNAAKEDIVEALQAGVNNYVVK
                     PFTPETLKEKIESLLG"
     gene            complement(3017..3424)
                     /locus_tag="VFV26_00100"
     CDS             complement(3017..3424)
                     /locus_tag="VFV26_00100"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4844584.1"
                     /translation="MSLERRQFQRIPLEAILSFQELSFHKGEAPASSHYRDVSIGGLL
                     VDSPRAYPLGTLLKLEIRVPGWGRFQNHFGPTQEADARPLVALGQVVRIEQLDGGGYE
                     LGVKFQNVYPDDLEALMKFVEAAAPPSVPPSTL"
     gene            3870..4385
                     /gene="pyrR"
                     /locus_tag="VFV26_00105"
     CDS             3870..4385
                     /gene="pyrR"
                     /locus_tag="VFV26_00105"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEX4844585.1"
                     /translation="MDPGQMEATLRRLAADLVARMKPGEEVVLLGIRSRGLPLAERLA
                     SILRRTTGAQVPVGALDITLYRDDLTEMVGSPIVRPTEIPFALKERTVVLVDDVLYTG
                     RTVRAALDALLDHGRPRRVMLLVMADRSGRELPIQADFAGLQVEVPPGHRVAVRVKEI
                     DGEDGVTVEAC"
     gene            4385..5344
                     /locus_tag="VFV26_00110"
     CDS             4385..5344
                     /locus_tag="VFV26_00110"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX4844586.1"
                     /translation="MTAERYVFPHKHLLGIEPLSSRDITALLDQAQAFEEVCERPSIK
                     IVPALRKKLVVNLFFENSTRTRNSFEIAEKRLSAEIINFDADTSSLNKGETLVDTAMN
                     LEAMHPDLIVMRHSAPGAHALLARHMKASIVNAGDGAHEHPTQALLDAYTLRKRLGRL
                     EGLKVAIVGDIRHSRVVRSNLWLLTRMGAKVTLVGPPTLVPQEMKATWPGIDISHDFD
                     AVIPSQDAIMMLRAQFERGTGAYIPGQGEYSRFFQLNPARMKQAKKDVVVLHPGPINR
                     GLEITSDVADGPNNLILDQVTNGVPVRMAVLYLLSHPHGEQVP"
     gene            5344..5871
                     /locus_tag="VFV26_00115"
     CDS             5344..5871
                     /locus_tag="VFV26_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HEX4844587.1"
                     /translation="MPPVEILSRLLWIRDAAALPDAALADQLGLEAKALAALVKAHPE
                     RFPEMLVFHLTAEERQKIPDAPVRAFTEAGAALLAGLVEKEKEAALFTLLPAFAEARH
                     VLTAQAEVSMRVSTLEQKLEMVLKMLQGEEVEGAPAERPIGFVAEEDLPKGLKARQRS
                     RKIEREGRERGEGRE"
     gene            5868..6257
                     /locus_tag="VFV26_00120"
     CDS             5868..6257
                     /locus_tag="VFV26_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4844588.1"
                     /translation="MKDLVLKDEVFAVIGAAMDVHRALGTGFLESVYAEALERELEAR
                     NIPFEREVSLQIMYRGKPLSKRFQADLVVGGALIVELKAVGKLGLVERAQVVNYLKAT
                     GLHVGLLINFGSHPKLEWERIIHQVPE"
     gene            6311..7834
                     /gene="gpmI"
                     /locus_tag="VFV26_00125"
     CDS             6311..7834
                     /gene="gpmI"
                     /locus_tag="VFV26_00125"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEX4844589.1"
                     /translation="MTTGPITLLILDGFGDGPRNAFDATFMAAMPRFNALRKTYAATQ
                     LATSGEAVGLPEGQFGNSEVGHMNLGAGRVVWQELTRIDAAIRRGTFRENAVIGALLA
                     DLKASGKRLHLMGLVSDGGVHSHQSHLVALAQWAQAEGVATTIHAITDGRDTAQKSAD
                     GYLQWLTFQLRACPLVTIGSVCGRYTAMDRDQRWERTEQAWKLYVDGEAPQAAPDALA
                     AIAAAYERGETDEFVAPTKLDAFHPIADGDGVLWFNFRADRARQMCHALVHPAFAGFT
                     QKKRPAVKLLTFTAYDVALDPFVSVAYPPQSLDHILGELISGRGWKQFRTAETEKYAH
                     VTYFFNGGREAPFEGEERRLVPSPKVATYDLQPEMSLAEVSQGLETAIRSGQYRLLVC
                     NLANPDMIGHTGDLAAAVTACEAVDAAVGRIADATLAMGGALFITADHGNCECMRDEG
                     GNPHTSHTLNPVPAVLVAEGFEARQLRSGGALSDVAPTLLKLSGMDQPAAMDGMSLF"
     gene            7843..9468
                     /locus_tag="VFV26_00130"
     CDS             7843..9468
                     /locus_tag="VFV26_00130"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4844590.1"
                     /translation="MSHSPPIPRITPSAFARGLWVFLIVFNLAAAGMAAWMLRLNHRH
                     FVDRAEITTLNLAQVLEENVAGTIRQIDQAILAIQDEAQHDPRGPRLGALLQLQFHRV
                     GLLQSLQLADSAGRVTHGVPSTAGAPADVGGQPFFLRLKGDPQAELVISRPIQGPTGA
                     WGIVLARRITRSDGTFAGAVYATLATEQLARAMSQLDVGRKGSVSLRGEDLSLLIRYP
                     DYAGQQQMTGSTQVHGDYAAAVASDRPIMQFTAVSNIDGMRRTYTLRRTERPRFYILV
                     GLAQEEYLQAWRHQAIFTLVAVLGLISLTLGLGLMARAAWRRQRIDQARLASEEAKYR
                     LLAENAVDVIWSTDLDGKLTYISPSILRQRGWAPGEFLQLDLRDRVFSAQSLDLIRGR
                     IAAARSLPPGSQPFEDDILEVGVRHKDGHEIQVELRTRVVWSEDGRVLGLQGATRDIT
                     ERKRAEAERDKVIQELTLALAEVKQLSGMLPICAQCKKVRDDHGYWNQIETYLSEHTE
                     ATFTHGVCPECAAAFRQEMQARRDQKGGDGGQG"
     gene            9514..10062
                     /locus_tag="VFV26_00135"
     CDS             9514..10062
                     /locus_tag="VFV26_00135"
                     /inference="COORDINATES: protein motif:HMM:NF024911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4844591.1"
                     /translation="MKVAFIGTHGVGKTTLCYELAAALKREGIHVDIVKEVARLSPLP
                     INQKTSLEAQTWIFMTQMAEEIRSGSQHDVVVCDRSVLDNYAYMMLAFGRQMAIERFM
                     HHWMKGYDLLFKVPFSGQVSADGVRDTDTFFAESIDKLVDQLLEERSIPHERLGAGDR
                     AGWIHRVKEVVLHHPKGQKRLI"
     gene            10139..10318
                     /locus_tag="VFV26_00140"
     CDS             10139..10318
                     /locus_tag="VFV26_00140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844592.1"
                     /translation="MLGSARSIGTRLFLATGQAIRNIVLDPSNPKAFQNYEAALETTS
                     RIAESIRREVGQFRV"
     gene            10404..>10993
                     /locus_tag="VFV26_00145"
     CDS             10404..>10993
                     /locus_tag="VFV26_00145"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4844593.1"
                     /translation="MAETSILSARGGSFMFHPAGTLPQFTPEESSEEARAIAEAARDF
                     MNGEVMPRDEEIDRLDLELTRDLLAKAGDLGILGMEVPEAYGGLDLDKKTALLVLEEM
                     AKQASFSTSYTAHTSIGTMPIVYFGSHEQKAKYLPKLASGEWCAAYALTEAGSGSDAL
                     GAKATAVLQDGHWVLNGTKAWITNAGFADVFVVFAK"
BASE COUNT         1843 a         3818 c         3600 g         1732 t
ORIGIN      
        1 gaggcgcagg cagatgcagc gttcccgtgg ccggccccgc cgcctgggaa cccggaagcg
       61 ccaccccgcc cttgcggacg gcttccaggc tgcggatcag ctcgctggga tcgggatcct
      121 cgggctcgcc ctgcttccgg acctggatgc gcacgtcgtc caccaggacc ttgagcatgt
      181 ccacggcttc gaagagcagc tccatcaccc ggtcgctgag ttccatgcgg gatttgcgga
      241 gatcgtccag catgttctcg cccacgtggg ccagggcctg gaccttctgg aggcccagga
      301 atcccgcggc gcccttgatg gtgtggacgc tgcggaagat ggcgttcagc aggtccaggt
      361 cgcccggcga ttcttcaagg gccaggaagt tcgtttcgat ctgctcgaag tgctcctgcg
      421 cttcgacgag gaaatcctcg tagaagctgg gatcgtcgag ggcgaagtcg ttcatggctc
      481 acccgtcctg tggtccgcgg ccttccgccc ctggaggttc tggagctgtc ccgtttcggc
      541 gtccgtgagg agctgctgga gctccagcag gaagatcatg ccgttgtcca gccgggccac
      601 cttctcgatg tagcggttgg cgcccacggc ggtgacggag gggggtggcc cgaaccggct
      661 cagttccacc gggcggacct cgttcacggc gtccaccacc aggccggtga acacgccgcc
      721 gatgctcgtg atgaggatgc gggaaatgga ggtcgcctcc acgcgctcca ggccgaagcg
      781 ggtgcgcaga tccaccaccg gcatcacttc gccgcgcagg ttcagcacgc catccacgaa
      841 ctggggcgcc cggggcacgg gggtgatctg gctcaccatg atgatttcgc gcacttcgtg
      901 cagccgcagg ccatagcttt cagggcccag gcggaacacc accagttcga ggctgggtac
      961 cgtctcctgg gcccgggaat ccgacaggcc aaggccctgc cccatggccg cgatcttctc
     1021 ctggtcgtcg ccggtgatga tcttcagcac gttgatgagg ctcaccatgc ggccgggcag
     1081 caggaggatg ccttccaggt gctcgcgctc ggcttcggag agtgtctggg gcggcggcag
     1141 cacctgctcg tccaggaccc gcaggatctc ctggatctcg tccaccacca cgccgatgcg
     1201 ggcggtgccg aaggagagca gcaccaccat gtcccgcttg cgcggcgcgc caccctgttc
     1261 gatggacagg atctcggaca ggtcgatgag cggcatgacc tggtcccgga ggcagatgac
     1321 ccccatcacg tagtccggcg cgtccggaac cttggtgacg aggggcagct cgacgatctc
     1381 ctccacctgg tggagggcga tgccgaagga ctccgccccg aggcggaagg tcacgaaggg
     1441 gcggccatcc tgctcggctt cttcaacgta gttctcggaa cccatggcca gggagccgcc
     1501 caggctcaga tcctcgaact cggcccggcg ggtcagttcc gagctgtcca ggagcttctc
     1561 gagatggatg agcgtgatca gccggttgcc cacggtgacc atgcccgcca ggtactcggc
     1621 ccggatgccg gccaccaggg gcggcgtctc ccgcagggtg tggtcctcca ggcggaccac
     1681 ttcggccacg gaatccacct ggagccccgt ggcgccgctg gccaggcgga gcacgatgat
     1741 gcgggtcttc gcggtggtct cctggggggc caggtggaag cggatccggc tgtcgatcac
     1801 cgggatgatg aggccccgga ggttgatgac ccccaggatg aagctgggac tgccggggac
     1861 cggcgtgaca tcggtccggt gcgtgatctc ctgcacccgg tcgatgtcca ggccgaactc
     1921 cacgccgtcc agggtgaacg tcaccagctg gcccgagggg accagctcac tggcgagaag
     1981 ggcctgggtg ctctcggctg ccatggatca ccctttcttc tgggacttga aggcctcgat
     2041 cacggagtcc gcatgggcct tgttctcgtc gggggtggtg ccggtctggg cgatggtatg
     2101 gctgatggag ggccgctcgg cctcgctctt cagccccgtc cccagcagct ccacgatgta
     2161 gtcgtggatc tggcggaggt ggtggacgat tcgctccagc ttctgccggg tgatgtcctg
     2221 gaactgcatg agatccatgg cctcgaagac cttgtcctgg atctccttgc cggcgcccat
     2281 gacctcgtgg atggcctgct ggacaccggg ggactgggcg ccctcgtgct gcatcatgcc
     2341 ggtaatcagc tgctgctggc gggccaccag gcggctgatc tggtccagct ggtccatgac
     2401 cttgttggat tcccgctcgg tgacggcggt gacggtatcc agctcggcaa tgacatggcc
     2461 agcgccgtcc ttgtgggggc cggcgcctgc ggcaggaggg gagggctgca ctggcttcgg
     2521 cgccggcgcg gcggcagccg gagccttcgc ggccgccttg ggcttcttcg gtggcttgcc
     2581 gcctccggcg aggagggcgt cgatctcgga ctggtccatg gcctgctccc tacccgagga
     2641 gggactcgat cttttccttg agggtctccg gggtgaacgg cttcaccacg tagttgttca
     2701 cgccggcctg gagcgcctcc acgatgtcct ccttggcggc gttggtcgtc accatgagga
     2761 tcggaatggc ggcattctgg ccgcgcaccg tcttcacgaa ctcgaggcca tccatctccg
     2821 gcatgttcca gtcggtgatg atcatctcca cgccgccctg gccgagcttc tcgagcccgg
     2881 acttgccgtg ctccgcctcg accacatcgg tgtagccgat gcgggacagg gtgttgatga
     2941 tgatgcgccg catcgtcgag gaatcgtcca cgatgaggat cttcacgggg gcctcctgga
     3001 aaggaatgga tcagagtcag agggtggacg ggggaacaga cgggggcgcc gcggcctcca
     3061 cgaacttcat gagggcttca aggtcatcgg ggtagacatt ctggaacttg accccgagct
     3121 cgtagccgcc cccatccagc tgctcgatgc ggacaacctg gcccagcgcc accagggggc
     3181 gggcatcggc ctcctgggta gggccgaagt gattctggaa gcggccccag ccgggcacac
     3241 ggatctccag cttgagcaga gtgcccaggg ggtaggcccg gggggaatcc accagcaggc
     3301 cgccgatgga cacatcccgg tagtggctcg aggccggagc ctcccccttg tgaaaactga
     3361 gctcctggaa gctcaggatg gcctccaggg ggattctttg gaattgtcgg cgttccagac
     3421 tcattgtgga cgtcctcaaa tctggccatc ggagggggac ggcccggact tgaatcctgc
     3481 aaaacctggc cccggtgctc tcggtcccgg gccgggctcg gctagacttg agtccgtgcg
     3541 cgcgccccgc gggggcgcac cccggaggtt ccatgcccga tgccccaggc ccctgtcctc
     3601 cgcagcctga cccagacccc gcgcgcgccg cgctgggagc gccgggcagt agcccgccag
     3661 aaaggcgagg cgagcctagt ggttctaggc ggcccgagcc tgacgcagcg gggggctgcc
     3721 cgccgcccca gcccgaaggg acggcaccag ccgggcgccc ggcggcgtca gagcccttga
     3781 gcaacgagcc acgttgccct gcgggccctt ccttgccgag catcccggct ggtgccgtcg
     3841 cggcacacgg ggggtctggg tcaggctgca tggaccccgg ccagatggaa gccaccctcc
     3901 ggcggctggc cgctgacctg gtggcccgga tgaagcccgg ggaggaggtc gtccttctgg
     3961 gcatccgctc ccggggcctg cccctggccg agcgcctggc gtccatcctc cgcaggacca
     4021 ccggcgccca ggtgcccgtg ggcgccctgg acatcaccct ctaccgggat gacctcaccg
     4081 agatggtcgg cagccccatc gtccggccca cggaaatccc cttcgccctg aaggaacgga
     4141 ccgtggtgct ggtggacgac gtgctctaca ccgggcgcac cgtgcgcgcc gccctggacg
     4201 ccctgctgga ccacggccgc ccccgccggg tgatgctcct ggtcatggcc gaccgcagcg
     4261 gccgggagct gcccatccag gccgacttcg cgggcctgca ggtggaagta cccccgggcc
     4321 accgcgtggc cgtgcgggtg aaggagatcg atggcgaaga cggtgtgacc gtggaggcct
     4381 gctgatgaca gccgaacgct acgtcttccc ccacaagcac ttgctgggca tcgagcccct
     4441 cagctcccgg gacatcaccg ccctgctgga ccaggcccag gccttcgagg aggtctgcga
     4501 gcgccccagc atcaagatcg tccccgccct gcgcaagaag ctggtggtga acctcttctt
     4561 cgagaacagc acccgcaccc gcaacagctt cgagatcgcc gagaagcggc tgtccgccga
     4621 aatcatcaac ttcgacgccg acaccagcag cctcaacaag ggcgagaccc tcgtcgacac
     4681 ggccatgaac ctggaggcca tgcacccgga cctcatcgtc atgcgccaca gcgccccggg
     4741 cgcccacgcc ctgctggccc ggcacatgaa ggccagcatc gtgaacgccg gcgacggggc
     4801 ccacgagcac cccacccagg ccctgctgga cgcctacacc ctgcgcaagc ggctcggccg
     4861 cctcgagggc ctgaaggtgg ccatcgtggg cgacatccgc cacagccgcg tggtgcgctc
     4921 caacctctgg ctgctcaccc gcatgggggc caaggtgacc ctggtgggcc cgcccaccct
     4981 cgtgccccag gagatgaagg ccacctggcc cggcatcgac atcagccacg atttcgacgc
     5041 ggtgatcccc agccaggacg ccatcatgat gctgcgcgcc cagttcgagc ggggcaccgg
     5101 cgcctacatc cccggccagg gcgagtacag ccgcttcttc cagctcaacc ccgcccgcat
     5161 gaagcaggcc aagaaggacg tggtggtcct gcatcccggc cccatcaacc ggggcctgga
     5221 gatcaccagc gacgtcgccg atggccccaa caacctgatc ctcgaccagg tgaccaacgg
     5281 cgtccccgtc cgcatggccg tcctctacct gctgtcccat ccccacgggg aacaggtgcc
     5341 gtgatgcccc ccgtcgagat cctctcccgc ctgctctgga tccgggacgc cgccgccctt
     5401 cctgacgcgg ccctggccga tcagctgggc ctcgaagcca aggccctggc cgccctggtg
     5461 aaggcccacc ccgagcggtt cccggaaatg ctggtgttcc acctgaccgc cgaggagcgg
     5521 cagaagatcc ccgacgcccc ggtgcgggcc ttcaccgagg ccggcgcggc cctgctggcg
     5581 ggcctggtgg agaaggagaa ggaggcggcc ctgttcacgc tgctccccgc cttcgccgag
     5641 gctcgtcatg tcctcaccgc ccaggccgag gtgtccatgc gtgtttcgac cctggaacag
     5701 aaactggaga tggtcctgaa gatgctccag ggcgaggagg tcgaaggcgc ccccgcggag
     5761 cggcccatcg gcttcgtggc cgaggaggac ctgcccaagg ggctcaaggc ccggcagcgc
     5821 agcagaaaga tagaacgcga agggcgcgaa cgaggcgaag gacgcgaatg aaggatcttg
     5881 tgctcaagga cgaagtcttc gcggtcatcg gagccgcgat ggatgtccat cgggccctgg
     5941 gaaccggatt tctggaatcc gtctatgcgg aagccctcga acgcgaactg gaggccagga
     6001 acatcccatt cgagcgggaa gtcagcctcc agatcatgta ccgcggcaag cccctgtcca
     6061 agagattcca ggcagacctg gtggtgggag gcgctctcat tgtcgaactc aaggccgtcg
     6121 gcaaacttgg gctggtggaa cgcgcccagg tcgtgaatta cctcaaggcc acggggctcc
     6181 acgtcgggct tctcatcaac ttcggatcgc accccaaact ggaatgggag cgcatcatcc
     6241 accaggttcc agagtaggcc ttcgcgccct tcgccgtctt cgcgtccttc gcgttccaaa
     6301 acaggaattc atgaccaccg gccccatcac cctcctcatc ctcgacggct tcggcgacgg
     6361 gccgcggaac gccttcgacg ccaccttcat ggcggccatg ccgcgcttca acgccctccg
     6421 gaagacctac gccgccaccc agctggccac cagcggcgag gccgtgggcc ttcccgaggg
     6481 ccagttcggc aattcggaag tgggccacat gaacctgggc gcgggccgcg tggtgtggca
     6541 ggagctcacc cgcatcgacg ccgccatccg gcgcgggact ttccgcgaga acgccgtcat
     6601 cggcgccctg ctggcggacc tcaaggcctc ggggaagcgc ctgcacctga tgggcctggt
     6661 gagcgacggg ggcgtccaca gccaccagag ccacctggtg gccctggccc agtgggccca
     6721 ggccgagggg gtggccacga ccatccacgc catcacggac ggccgcgaca cggcccagaa
     6781 gagcgccgac ggctacctcc agtggctcac cttccagctg cgggcttgcc cccttgtcac
     6841 catcggttcg gtctgcgggc gctacacggc catggaccgg gaccagcgct gggagcgcac
     6901 cgagcaggcc tggaaactct atgtggatgg agaggccccg caggcggccc ctgacgccct
     6961 ggctgccatc gccgcggcct acgaacgggg cgagacggac gagttcgtgg cccccacaaa
     7021 gctcgacgcc ttccatccca tcgccgacgg cgacggcgtg ctgtggttca acttccgcgc
     7081 cgaccgggcc cgccagatgt gccacgccct ggtgcatccg gccttcgccg ggttcaccca
     7141 gaagaagcgt cccgcagtga aactcctcac gttcacggcc tacgacgtgg cattggatcc
     7201 cttcgtgtcc gtggcctacc cgccccagag cctcgaccac atcctgggcg agctcatcag
     7261 cggccggggc tggaagcagt tccgcaccgc cgagaccgag aagtacgccc atgtcaccta
     7321 cttcttcaac ggcgggcggg aggcgccctt cgagggtgag gagcgccgcc tggtgccctc
     7381 ccccaaggtg gccacctacg atctgcagcc cgagatgagc ctggcggagg tgagccaggg
     7441 gctggaaacc gccatccgct cgggccagta ccgcctgctg gtctgcaacc tggccaaccc
     7501 ggacatgatc ggccacacgg gcgacctggc cgcggccgtc accgcctgcg aggccgtgga
     7561 tgccgccgtg ggccgcatcg ccgacgccac cctggccatg ggcggcgccc tcttcatcac
     7621 ggcggatcac ggcaactgcg agtgcatgcg ggacgagggc ggcaacccgc acacctcgca
     7681 caccctgaat cccgtgcccg cggtcctggt ggcggaaggc ttcgaagccc gccagctgag
     7741 gtccggtggc gccctcagcg acgtggcccc caccctgctg aaactgtccg ggatggacca
     7801 gcccgccgcc atggacggta tgagcctatt ctgagggctt tgatgagcca ctcgcctcca
     7861 atcccccgga tcaccccctc ggccttcgcc agggggctgt gggttttcct catcgtcttc
     7921 aacctggccg ccgccggcat ggccgcctgg atgctccgcc tcaaccaccg tcattttgtc
     7981 gaccgggcgg aaatcaccac cctgaacctg gcccaggtgc ttgaggagaa cgtcgcgggc
     8041 accatccggc agatcgacca ggccatcctg gccatccagg atgaggccca gcacgatccc
     8101 cggggcccca ggctcggggc gctcctccag ctccaattcc accgggtggg cctcctccag
     8161 tccctccagc tcgcagattc agcgggccgg gtcacccacg gggtcccctc caccgcaggg
     8221 gccccagcgg acgtgggcgg ccagcccttc ttcctccgcc tcaaaggaga cccccaggca
     8281 gagctggtca tctccaggcc gatccagggc ccgacggggg cctggggcat cgtcctggcc
     8341 cgacggatca cccgctccga cgggaccttc gccggcgcgg tctacgcgac ccttgccacg
     8401 gaacagctcg cccgtgccat gtcccagctg gatgtgggcc ggaaggggtc cgtctccctg
     8461 aggggcgaag acctcagcct gctcatccgc taccccgact atgccgggca gcagcagatg
     8521 accgggagca cccaggtcca tggggattac gccgcggcgg tggcctcgga ccgccccatc
     8581 atgcagttca cggcagtctc caacatcgac ggcatgcggc ggacctatac cctgcgaaga
     8641 accgaaaggc cacggttcta cattctcgtg ggcctggccc aggaagagta cctccaggcc
     8701 tggcgccatc aggccatctt caccctcgtg gccgtcctgg gcctgatctc cctcaccctc
     8761 ggattgggcc tcatggcccg agccgcctgg cggcgccagc ggatcgacca ggcccgactg
     8821 gcctccgaag aggcgaagta ccgcctgctg gcggagaacg ccgtggatgt catctggtcc
     8881 acggaccttg acggaaagct cacctacatc agtccctcca tcctccgcca gcggggctgg
     8941 gcgcccgggg agttcctgca gctggacctg cgcgaccggg tgttctccgc ccagagcctg
     9001 gacctgatcc gtggcaggat cgctgccgcc cggagccttc ccccgggttc ccagcctttc
     9061 gaggacgaca tcctcgaagt gggcgtgcgg cacaaggatg ggcacgagat ccaggtggag
     9121 ctccgcacca gggtggtgtg gagcgaggac ggaagggttc tggggctcca gggggccacc
     9181 cgggacatca ccgaacggaa acgggccgag gcggagcggg acaaggtcat ccaggagctg
     9241 accctggccc tggccgaagt gaagcagctc agcggcatgc tccccatctg cgcccaatgc
     9301 aagaaagtcc gggacgacca tggctactgg aaccagatcg agacctacct ttccgaacac
     9361 accgaagcca ccttcaccca cggcgtctgc cccgaatgcg cggccgcgtt ccggcaggaa
     9421 atgcaggccc ggcgtgacca gaagggtggg gacggaggcc aaggttgatg aagggcacat
     9481 ccgctgacgg gccccaccgg ggatactgag gttatgaaag tcgcattcat cggcacccac
     9541 ggcgtgggca agaccaccct ctgctacgag ctggccgcgg ccctcaagcg ggagggcatc
     9601 catgtggaca tcgtgaagga ggtggcgcgg ctctcgcccc tgcccatcaa ccagaagacc
     9661 tcgctcgaag cccagacctg gatcttcatg acccagatgg cggaagagat ccgttcgggc
     9721 agccagcatg acgtggtcgt ctgcgatcgc agcgtgctgg acaactacgc ctacatgatg
     9781 ctggccttcg gccgccagat ggccattgag cgcttcatgc accactggat gaagggctac
     9841 gacctgctgt tcaaggtgcc cttctccggc caggtgtccg ccgatggcgt gcgggacacg
     9901 gacaccttct tcgccgaatc catcgacaag ctggtggacc agctcctgga agagcggtcc
     9961 atcccccacg aacgcctggg tgccggggac cgggccggct ggatccatcg ggtgaaagag
    10021 gtggtcctcc accatcccaa agggcaaaaa cgcctcatct gattcacggt ttcacaagtc
    10081 gttcccgggc gcgccgatcc gatgaccagg gatggaatgg catcctgatg gaggctgtgt
    10141 gcttggatcg gcgcgaagca tcggaacccg gctgttcctc gccacgggcc aggccatccg
    10201 caacatcgtg ctggacccgt ccaaccccaa ggccttccag aactacgagg cggccctgga
    10261 gaccacctcc cgcatcgccg aaagcatccg ccgcgaagtg gggcagttcc gggtgtagcc
    10321 ccgaacttgt gatccaggtc ccccattccc cgctggagag gtcctgactc cgggtagatg
    10381 atcaagaggt cgggaggtcc gttatggccg agaccagcat cctgtccgcc cggggcggca
    10441 gcttcatgtt ccaccccgcg ggcaccctgc cccagttcac gccggaggaa agcagcgaag
    10501 aggcccgggc catcgccgag gcggcccgcg acttcatgaa cggcgaggtc atgccccggg
    10561 acgaggagat cgaccgcctc gacctggagc tcacccgcga cctgctggcc aaggccggcg
    10621 acctgggcat cctgggcatg gaggtccccg aggcctacgg cggcctggac ctggacaaga
    10681 agacggccct gctggtgctg gaggagatgg ccaagcaggc cagcttctcc accagctaca
    10741 ccgcgcacac cagcatcggc accatgccca tcgtctactt cgggagccat gagcagaagg
    10801 ccaagtacct gcccaagctg gccagcggcg aatggtgcgc ggcctacgcc ctgacggaag
    10861 ccggcagcgg ttccgacgcc ctgggagcca aggccactgc cgtgctgcag gacggccact
    10921 gggtgctgaa cggcaccaag gcctggatca ccaacgccgg cttcgccgat gtgttcgtgg
    10981 tgttcgccaa gat
//
LOCUS       DASUDT010000007         3853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_44755, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000007 DASUDT010000000
VERSION     DASUDT010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3853
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44755"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VFV26_00150"
     CDS             <1..228
                     /locus_tag="VFV26_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844594.1"
                     /translation="NHLTDALANTAGNFYINDKCTGAVVGHQPFGGSRASGTNDKAGS
                     FLNLIRWTSPRTIKESFTPPADLKFPFLEAE"
     gene            392..1090
                     /locus_tag="VFV26_00155"
     CDS             392..1090
                     /locus_tag="VFV26_00155"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4844595.1"
                     /translation="MDLIWEGLRRALELLLTLDPEVLRITLLSLQISGLATLLSLVIG
                     LGVALPVALNEFPGKRLVIALLNTGMGLPPVVVGLFVTVLLWRNGPLGFLEILYTPWA
                     MVLAQAAIASPIIAGISLSALQQLPPGLRLQILALGASRPQMVWLLLKEARLPLLAAV
                     MAGFGGVISEVGASIMVGGNIKGHTRVLTTATVMETGKGNFDVAIALSLILLAMAFSV
                     NALLTHLQQRSRRR"
     gene            1087..2205
                     /locus_tag="VFV26_00160"
     CDS             1087..2205
                     /locus_tag="VFV26_00160"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4844596.1"
                     /translation="MSRETLLQARNLQVHRGGARVLDVPALDLRAGEVLALMGPNGAG
                     KSTLMLALAGLLPPSKGEFRFREAELQSRVDREAFRRRMTMVFQDPLLFDATVAQNIA
                     SGLKLRGVPAAERTARAEDWARRLGLGDLLGRSARHLSGGEAQRTALARAFVLRPEIL
                     FLDEPFSALDAQARESLIEDLGHILAGTGTTAVISTHDQGEAARLAHRLAVMREGRIV
                     QTGGLREVMNHPEDPFVATFVGMETLLKGQVVACREGLLSLRFRKDSGHREVLAVGEA
                     QPGQTVLVGVRPEHVALSLQTDNTSSARNAFPGAVTKVIPRGPFFKIELDCGFFLAAY
                     VTAQSLAELGLQPGCPVVASFKATAVHLIRREGLDAEV"
     gene            2316..2738
                     /locus_tag="VFV26_00165"
     CDS             2316..2738
                     /locus_tag="VFV26_00165"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4844597.1"
                     /translation="MKQLVIDFQKCDAGRNCNHECEMECAIKVFKVDDPAQAALQIKA
                     YEDGGGKAVLCDQCGDCVVVCPSEALKRNKLGVVMIDKQLCVGCYMCIGFCEKDAFMR
                     NPDWIVPHKCTSCGICVKVCPHGALSIVDVPEPAVRII"
     gene            2895..>3853
                     /locus_tag="VFV26_00170"
     CDS             2895..>3853
                     /locus_tag="VFV26_00170"
                     /inference="COORDINATES: protein motif:HMM:NF014750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4844598.1"
                     /translation="MSQLVFDPSKVMKIDYTKRTEYLDGLAAIKAAHKVLKEIAYTPS
                     LPEKGYTNRTLYVNVGSLEITEKPVTQQMKDVFIGGRGFGLYHLWNAVKPTTRWNDPE
                     NEIIISPGPVAGMTQYAGTGKSLVVSLSPQTDIPIDSNVGGFYGPLLKFSGFDALELQ
                     GKSDKDVILFIDGVKGIIRIEEAPTDPVDSHVLAEILTHMYAEDEKDLPNISVVSTGA
                     AAEHSLIGMLNFSFYDRRRKCVRFKQAGRGGIGTVFRDKRIRALVVRGPKVAGDLNHP
                     ADPETIAKTGIKYHKEIRENDGSQCMMRRNGTAHIVEIMDAYDL"
BASE COUNT          649 a         1367 c         1211 g          626 t
ORIGIN      
        1 aaccacctca cggacgccct ggcgaacacc gccggcaact tctacatcaa cgacaagtgc
       61 accggcgccg tggtgggcca ccagcccttc ggcggctccc gggcctcggg caccaacgac
      121 aaggccggca gcttcctgaa cctgatccgg tggacctcgc cgcgcaccat caaggagagc
      181 ttcacgcccc ccgcggacct caagttcccg ttcctcgaag cggaatgacc tagacaaacc
      241 caccacggag gcacggagtg cacagagaaa gacacggagg aagagataga gggaaacacc
      301 tccgggcaca gcatcgctct gtgttcttct ctccgtctga tctccgtggc ctccgtgtct
      361 ccgtggtgtg ttttttttga atggctccta aatggatttg atctgggagg gcctccggag
      421 ggcgctggag ctgctgctca cgctggatcc cgaggtcctc cggatcaccc tgctctccct
      481 ccagatctca ggcctggcca ccctcctcag cctggtgatc ggccttggcg ttgccctgcc
      541 cgtggccctc aacgagttcc cgggcaagcg actggtgatc gccctcctca acacgggcat
      601 gggcctgcct cccgtggtgg tgggcctctt cgtgaccgtg ctgctgtggc ggaatgggcc
      661 cctgggcttc ctggagatcc tctacacccc ctgggccatg gtcctcgccc aggccgccat
      721 cgcctcgccc atcatcgcgg gcatcagcct gtcggcgctc cagcagctgc ccccgggcct
      781 gcgcctgcag atcctggccc tgggcgcctc ccggccccag atggtgtggc tcctgctgaa
      841 ggaggcccgc ctgcccctgc tggccgccgt catggcgggc ttcggcgggg tcatctccga
      901 ggtcggcgcg tccatcatgg tgggcggcaa catcaagggc catacccgcg tgctcaccac
      961 cgccaccgtc atggagaccg gcaagggcaa cttcgatgtg gccatcgccc tcagcctcat
     1021 cctgctggcc atggccttct cggtgaacgc cctgctcacc cacctccagc agcggagccg
     1081 gcgccgatga gccgggagac cctcctccag gcccggaacc tccaggtcca ccgcggcggc
     1141 gcccgggtcc tcgacgtgcc ggccctggac ctccgcgccg gggaggtgct ggccctcatg
     1201 gggcccaacg gcgccgggaa gagcaccctc atgctggccc tggcgggcct cctgccccca
     1261 tcgaaggggg aattccgctt cagggaggcg gagctccagt ctcgtgtcga tcgcgaggcc
     1321 ttccggcgcc gcatgaccat ggtgttccag gatcccctgc tcttcgacgc caccgtggcc
     1381 cagaacatcg cctcgggcct gaagctgcgc ggggtgcccg cggcggagcg gaccgcccgg
     1441 gcggaggact gggcccggcg gctgggcctc ggggacctcc tgggccgctc ggcccgccac
     1501 ctctccggcg gcgaggccca gcgcacggcc ctggcccggg ccttcgtcct gcgtccggag
     1561 atcctcttcc tggacgagcc cttctcggcc ctggacgccc aggcgcggga gagcctcatc
     1621 gaggacctgg ggcacatcct ggccggcacc ggcaccaccg ccgtgatctc cacccacgac
     1681 cagggcgagg cggcccggct ggcgcaccgg ctggcggtga tgcgggaggg gcgcatcgtc
     1741 cagacggggg gcctccggga ggtcatgaac catccggagg atcccttcgt ggccaccttc
     1801 gtgggcatgg agaccctgct caaggggcag gtggtggcct gccgggaggg cctgctctcg
     1861 ctgcggttcc ggaaggactc cggccatcgc gaagtcctcg ccgtggggga ggcccagccc
     1921 ggccagaccg tcctggtggg ggtccggccg gagcatgtgg ccctgtcttt acaaaccgac
     1981 aacaccagca gcgcccggaa cgccttcccg ggggctgtga ccaaggtcat accccgcggg
     2041 cctttcttca agatcgagct ggattgcggc ttcttcctgg cggcctacgt caccgcccaa
     2101 tccctggcag aactcggact tcagcccggc tgccccgtgg tggcctcctt caaggccacc
     2161 gccgtccacc tcatccgccg cgagggcctc gacgccgaag tgtgacccgc gtccgttgcc
     2221 ggggggcggg ccccgcacta gcctcacatc tgggatggcc tggccattcc ggattgacgt
     2281 gtagccaaag gtgcgtttgc ggaggcctcc gagccatgaa acagctggtg atcgatttcc
     2341 agaagtgcga tgcagggcgc aactgcaacc acgagtgcga gatggagtgc gccatcaagg
     2401 tcttcaaggt ggatgacccc gcccaggccg ccctccagat caaggcctac gaggacggcg
     2461 gcggcaaggc cgtcctgtgc gaccagtgcg gcgactgcgt ggtggtctgc ccctccgagg
     2521 ccctcaagcg caacaagctg ggcgtcgtga tgatcgacaa gcagctctgc gtgggctgct
     2581 acatgtgcat cggcttctgc gagaaggacg ccttcatgcg caacccggac tggatcgtcc
     2641 cccacaagtg cacctcctgc ggcatctgcg tgaaggtgtg cccccacggc gccctgtcca
     2701 tcgtcgatgt ccccgagccg gccgtccgga tcatttgaga acaccgaaga cccaccacgg
     2761 aggcacagag agcgctgaga catggacacg gagaaaaaaa ccggaatgcc cgctgttttt
     2821 ctccgtgaat tctcgttgaa tcctctgtgt tctccgtgcc tccgtggtga atccttccat
     2881 gaaaaggaac cgacatgagc cagcttgtgt ttgacccctc caaggtgatg aagatcgact
     2941 acacgaagcg cacggagtac ctcgatggcc tggccgccat caaggccgcg cacaaggtgc
     3001 tgaaggagat cgcctacacc cccagccttc ccgagaaggg ctacaccaac cgcaccctct
     3061 acgtgaacgt gggctccctg gagatcacgg agaagcccgt cacccagcag atgaaggatg
     3121 tcttcatcgg cggccgcggc ttcggcctct accacctgtg gaacgccgtg aagcccacca
     3181 cccggtggaa cgaccccgag aacgagatca tcatcagccc cgggcccgtg gccggcatga
     3241 cccagtacgc gggcaccggc aagtctctgg tggtgagcct ctcgccccag acggacatcc
     3301 ccatcgattc caacgtgggc ggcttctacg gccccctgct caagttctcg ggcttcgacg
     3361 ccctcgagct ccagggcaag tccgacaagg acgtcatcct gttcatcgat ggcgtgaagg
     3421 gcatcatccg catcgaggag gcgccgacgg atccggtcga cagccatgtg ctggcggaga
     3481 tcctgacgca catgtacgcc gaggacgaga aggacctgcc gaacatctcc gtggtgtcca
     3541 ccggcgccgc cgccgagcac agcctcatcg gcatgctgaa cttctccttc tacgaccgcc
     3601 gccgcaagtg cgtgcgcttc aagcaggcgg gccggggcgg catcggcacc gtgttccggg
     3661 acaagcgcat ccgcgccctg gtggtgcgcg ggcccaaggt ggcgggcgac ctcaaccatc
     3721 cggcggatcc cgagaccatc gccaagaccg gcatcaagta ccacaaggag atccgcgaga
     3781 acgacggcag ccagtgcatg atgcgccgca acggcacggc ccacatcgtg gagatcatgg
     3841 acgcctacga cct
//
LOCUS       DASUDT010000008         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_376189, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000008 DASUDT010000000
VERSION     DASUDT010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376189"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /gene="ribB"
                     /locus_tag="VFV26_00175"
     CDS             complement(<1..1048)
                     /gene="ribB"
                     /locus_tag="VFV26_00175"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX4844599.1"
                     /translation="MSQHPDSPFASIEEAIDAIRQGRMVVVVDDEDRENEGDLTLAAE
                     HVTPEAIAFMATFGRGLICAALEGPVLDRLQIPLMVRDNTSPFETAFCVSVEAREGTT
                     TGISAQDRSRTIQALIAPDAKPQHFVKPGHVFPLRARPGGVLTRTGQTEASVDLARLA
                     GLHPSGVICEIMKDDGTMARVPDLVPFCRQHGLLLVTVADLVAYRLRQEPLVSPLEVR
                     AMASQWGALQVHRFQSLLDGGSHLAFVLGDLGGDPPLVRVHVETLPDDLHGFESGLFQ
                     KGMAALAREGRGVLVYLRRHAHTPGIADEGHAQPQAMSDRDFGVGAQILRQLGIGKMR
                     LLSRHETKYIGLRGF"
     gene            1152..>2150
                     /locus_tag="VFV26_00180"
     CDS             1152..>2150
                     /locus_tag="VFV26_00180"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX4844600.1"
                     /translation="MSQGVIQGSMREAPLPDIIQLVSQGGKSGCFHVQQDASKARIYL
                     KDGRIIHAVTHAGEGFEALMEVALWLDGSYRFEEMVPDVPTSITKPNASVLMELGRRM
                     DEWRVISQKVPSVDLYPASTLLPGETPHGVNPREARILSLSTGYFSVAEVAEVMQKPV
                     LTTAKDLYGLVMAGHVVLKGIRSGKPPKVDAPPAPAPASEPEPARELMTASAMFGSLP
                     APVASGPMEEDTAIVRLQPPPPRAAGFPEGDEAMPETVGGGFAGAVPPLPPKPSPADD
                     PQRMVKLMNFTQRIAQAAKMVLPEVQHEMINRLQAKATQQIISGEGPEAVKSLALAI"
BASE COUNT          333 a          738 c          757 g          322 t
ORIGIN      
        1 cgaagccacg gaggccaatg tacttggttt catgccggct gagcaggcgc attttcccga
       61 tgcccagctg ccggaggatc tgggcgccca cgccgaaatc ccggtcgctc atggcctggg
      121 gctgggcgtg gccctcgtcg gcgatgcccg gggtgtgggc gtggcggcgg agatagacca
      181 gcacgccgcg gccctcccgg gccagggcgg ccatgccctt ctggaagagg cccgactcga
      241 agccgtgcag gtcgtcgggc agggtctcca cgtggacacg caccaggggc gggtccccgc
      301 ccaggtcgcc cagcacgaag gccaggtggc tgccgccgtc cagcaggctc tggaaacggt
      361 ggacctgcag ggccccccac tggctggcca tggcccggac ttcgaggggg gagaccaggg
      421 gctcctgccg gaggcggtag gccaccaggt ccgccacggt cacgaggagc aggccgtgct
      481 ggcggcagaa ggggaccagg tccggcaccc gggccatggt gccgtcgtcc ttcatgatct
      541 cgcagatcac gccactgggg tggaggcccg cgagccgggc gaggtccaca ctggcctcgg
      601 tctggcccgt gcgcgtgagc acgccgcccg ggcgggcccg cagcgggaag acatggccgg
      661 gcttcacgaa gtgctggggt ttggcgtccg gggcgatgag ggcctggatg gtgcgcgagc
      721 ggtcctgggc gctgatgccg gtggtggtgc cctcccgggc ctcgacggag acgcagaagg
      781 ccgtttcgaa ggggctggtg ttgtcccgga ccatgagcgg gatctggagc cggtccagca
      841 cggggccctc cagggccgcg cagatgaggc cccggccgaa ggtggccatg aaggcgatgg
      901 cctccggggt cacgtgttcg gcggccaggg tgaggtcgcc ctcgttctcc cggtcctcgt
      961 catcgaccac gaccaccatg cggccctgcc ggatggcgtc aatggcttcc tcgatggagg
     1021 cgaaggggga gtcggggtgc tggctcatag accccccagc atcgctcagg aggacccggg
     1081 ggggaagggc gcactacgtg gtaaggttga gcatctcctg tgtccctcca ttttccagag
     1141 aggaactacc catgtcccag ggtgtgatcc aaggctccat gcgcgaggcg ccgctgcccg
     1201 acatcatcca gctcgtgagc cagggcggaa agtccggctg cttccacgtg cagcaggacg
     1261 cctccaaggc ccggatctat ctgaaggatg gccggatcat ccatgccgtc acccatgccg
     1321 gcgagggctt cgaggccctc atggaagtgg ccctctggct ggacggcagc taccgcttcg
     1381 aggagatggt gcccgatgtg ccgaccagca tcaccaagcc caatgcttcc gtgctcatgg
     1441 aactggggcg gcgcatggac gagtggcgcg tcatcagcca gaaggtcccc tccgtggacc
     1501 tctaccccgc ctccaccctc cttcccggtg agacgcccca cggcgtgaat ccgcgcgagg
     1561 ccaggatcct gtcgctctcc accgggtatt tcagcgtggc cgaagtggcc gaggtgatgc
     1621 agaaacctgt gctcaccacc gccaaggatc tctacggcct ggtcatggcc gggcatgtgg
     1681 tcctgaaggg catccgctcg ggcaagcccc ccaaggtcga cgcgccgccc gcccctgcgc
     1741 ccgcgtccga acccgagccc gcccgtgagc tgatgaccgc ctcggccatg ttcggatccc
     1801 ttccggcgcc ggtggcttcc gggcccatgg aggaggacac cgccatcgtg cggctgcagc
     1861 ctccccctcc ccgcgccgcg ggttttcccg agggcgacga ggccatgccg gagaccgttg
     1921 gcggcggctt cgcgggggcc gttccgcccc tgccgcccaa gccctcgccc gcagacgacc
     1981 cccagcgcat ggtgaagctc atgaacttca cccagcgcat cgcccaggcc gccaagatgg
     2041 tgctgcccga ggtccagcac gagatgatca accggctgca ggccaaggcc acccagcaga
     2101 tcatttccgg cgaagggccc gaggcggtga agagcctggc gctggccatc
//
LOCUS       DASUDT010000009         4053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1304054, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000009 DASUDT010000000
VERSION     DASUDT010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304054"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1736
                     /locus_tag="VFV26_00185"
     CDS             168..1736
                     /locus_tag="VFV26_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEX4844601.1"
                     /translation="MGLSEEIQRRRTFAIISHPDAGKTTLTEKLLLYGGAIDRAGSVK
                     AREGGASAHSDWMSIEQERGISVTSAAMQFEYQGRAINLLDTPGHQDFSEDTYRALTA
                     ADAVVMLLDCAKGVEEQTKKLFRVARERRLPIFTFVNKLDRPGREPVELIDEVEELFG
                     LHAVPMTWPIGSGTDFKGVYVRATGQIQVFERAKAGRKARVAGQGGLDDPEIMALLTS
                     AELQQLKDDVDLMDHVLPAFDREAFLRGEQSPMFFGSAVNNFGVAEFLEEFLDLAPAP
                     GPRPLMNGGEVAPEQPFTAFVFKVQANMNKAHRDRVAFARIVSGRFERGMDALHVREK
                     KSIKLNYPHMFFGRERQIVDEAYPGDILGLINPGLFRIGDVLSAAGAIEFHAVPRFSP
                     EQFASVRLADPGARKGFLKGLGQIAEEGVVQVFWPKGGAPLPILGAIGRLQFEVLQHR
                     LKDEYACPVLLEPRGFQMARWLEGGWPEPSRYWGELVEDTEGNPAILFENDWQRRTTA
                     EKCPGLTFLEHPPK"
     gene            complement(1856..2776)
                     /locus_tag="VFV26_00190"
     CDS             complement(1856..2776)
                     /locus_tag="VFV26_00190"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEX4844602.1"
                     /translation="MATAKVREILSWYSSENPGVKANLARMMNTGRLAGTGKFVILPV
                     DQGFEHGPARSFAPNPGGYDPRYHVELAIEAGCNAYAAPLGFIEHVASDYAGDIPLIL
                     KLNNSDTLSKGHEPCSAITGSVEDALRLGCAAIGYTIYPGSGDRNLQYENLRELILEA
                     KAVGLPTVLWAYPRGAGLSKEGETAVDVCAYAAQIAAQLGAHIIKVKPPKAHIEQAEA
                     KKTFEKCAIPTETLKDRIAHVVQSAFNGRRIVIFSGGEAKGTDEVLKEVAEIAAGGAF
                     GSIMGRNAFQRPKAEAIQLLHAVMDLFAKA"
     gene            complement(2824..3891)
                     /locus_tag="VFV26_00195"
     CDS             complement(2824..3891)
                     /locus_tag="VFV26_00195"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HEX4844603.1"
                     /translation="MRRVGLVLLAGLGLTAEEPLHEMGPFPTREMFPMYLPTMAYQPA
                     DPVPLGPGRWRWAMHHIQANTFQFSDVFEQNPPRDSSGRVAVTRAFVDAHMADYASLP
                     MVYFFDEEISRLELEGRYGLDDRTDLWFRLPVQNHTGGFLDPLIEDFHRLGFEQYGRD
                     LVLQNQLALVVARYGKVTFFSDERVLGKTQDPVLGLTRRLLAEGSWTLSVAFSLKPPL
                     TRTYDAYRSGWDQSYGISGAWRGSGRHAFYFGAGFVQRPHGSPAYTEVGYRDGVGAHA
                     TWEYRRWPRVQPFLQLYWQSGYLQPQAYQHFDRPSLQHDLGLHWHWTPRTTLTLRYLN
                     NITHSGNTADMGLGASLTVHF"
     gene            complement(3904..4053)
                     /locus_tag="VFV26_00200"
     CDS             complement(3904..4053)
                     /locus_tag="VFV26_00200"
                     /inference="COORDINATES: protein motif:HMM:NF012928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4844604.1"
                     /translation="MDTCLFILNVLHEGLGDPKYRPCPLLIKYVDAGWLGKKSGRGFY
                     DYSKA"
BASE COUNT          642 a         1316 c         1428 g          667 t
ORIGIN      
        1 cccgtgggga gtccgggcca gtgcttgagt ccggcccctg gacccgggag aatggtcggg
       61 tgcggcctcc gcctgatgtc acgcgccgcg tgacgcccgc ctgccgccca gttgcaggcc
      121 tgcgaagccg gagtctccgc cgcgccattc ctttgttccg ggattccatg ggcctttccg
      181 aagaaatcca gcggcggcgg accttcgcca tcatcagcca ccccgacgcg ggcaagacca
      241 cgcttacgga gaagctgctg ctctacggcg gcgccatcga ccgggccggg agcgtgaagg
      301 cccgggaagg cggcgcatcc gcccattcgg actggatgag catcgagcag gagcgcggca
      361 tcagcgtgac gtccgcggcc atgcagttcg agtaccaggg ccgggccatc aacctgctgg
      421 acacgccggg ccaccaggac ttcagcgagg acacctaccg ggccctgacc gcggcggacg
      481 cggtggtgat gctcctggac tgcgccaagg gcgtggagga gcagaccaag aagctgttcc
      541 gcgtggcccg ggagcgcagg ctccccatct tcaccttcgt gaacaagctg gaccgccccg
      601 gccgcgagcc ggtggagctc atcgacgagg tggaggagct cttcggcctc cacgccgtgc
      661 ccatgacctg gcccatcgga tccggcacgg acttcaaggg cgtctacgtg cgcgccacgg
      721 gccagatcca ggtcttcgag cgggcgaaag cgggccggaa ggcccgcgtg gccgggcagg
      781 gcgggctgga tgatcccgag atcatggccc tgctgacctc tgccgaattg cagcagctca
      841 aggacgacgt ggacctcatg gaccatgtgc ttcccgcctt cgatcgcgag gccttcctgc
      901 ggggcgagca gtcccccatg ttcttcggct ccgccgtgaa caacttcggt gtggccgagt
      961 tcctggagga gttcctggac ctggccccgg ccccgggacc ccggcccctc atgaacggcg
     1021 gcgaggtggc gccggagcag cccttcacgg ccttcgtgtt caaggtgcag gccaacatga
     1081 acaaggccca tcgcgaccgc gtggccttcg cccgcatcgt gtcgggcagg ttcgagcggg
     1141 gcatggacgc cctgcacgtg cgcgaaaaga agtccatcaa gctgaactac ccccacatgt
     1201 tcttcggccg ggagcggcag atcgtggacg aggcctaccc cggcgacatc ctggggctca
     1261 tcaaccccgg cctctttcgc atcggcgacg tgctgagcgc cgccggggcc atcgagttcc
     1321 acgccgtgcc ccgcttctcg cccgagcagt tcgcctccgt gcgtctggcg gatcccggcg
     1381 cccgcaaggg cttcctgaag ggcctgggcc agatcgcgga agagggcgtg gtgcaggtct
     1441 tctggcccaa gggcggcgcc ccgctgccca tcctcggcgc catcggccgc ctccagttcg
     1501 aggtgctcca gcaccgcctc aaggacgaat acgcctgtcc cgtgctgttg gagccccgcg
     1561 gcttccagat ggcccgctgg ctggaaggcg gctggcccga gcccagccgc tactggggcg
     1621 agctggtgga ggacaccgag ggcaaccccg ccatcctctt cgagaacgac tggcagcggc
     1681 gcaccaccgc ggagaagtgc ccggggctga cgttcctgga acaccctccc aagtagctcg
     1741 gcggactcgg aatgcttcgc attccgagta gggaaaagac agaaggacaa aatcaaagag
     1801 cggcgcgaat gcgccgctct ttcctactcg gaacgcatcg cgttccgagc ccggcttaag
     1861 ccttcgcgaa gaggtccatc accgcgtgca gcagctggat ggcttcggcc ttgggtcgct
     1921 ggaaggcgtt gcggcccatg atggagccga aggcgccgcc ggcggcgatc tcggccactt
     1981 ccttcaggac ttcgtccgtg cccttggctt cgccgccgct gaagatgacg atgcggcggc
     2041 cgttgaaggc gctctgcacc acgtgggcga tgcggtcctt cagggtctcg gtggggatgg
     2101 cgcacttctc gaaggttttc ttggcttcgg cctgctcgat gtgggccttg ggcggcttca
     2161 ccttgatgat gtgggcgccc agctgggcgg cgatctgcgc ggcgtaggcg cagacgtcca
     2221 cggcggtctc cccttccttc gacaagccgg cgccgcgggg ataggcccac aacacggtgg
     2281 gcaggcccac ggccttggct tccaggatga gctcgcgcag gttctcgtac tggaggttgc
     2341 ggtcgccgct gccggggtag atggtgtagc cgatggcggc gcagcccagg cgcagggcgt
     2401 cctcgacgct gccggtgatg gcgctgcagg gctcatggcc cttgctgagg gtgtcgctgt
     2461 tgttgagctt gaggatgagg gggatgtcgc cggcgtagtc cgaggccacg tgctcgatga
     2521 agcccagggg cgccgcatag gcgttgcagc cggcctcgat ggccagctcc acgtggtagc
     2581 ggggatcgta gccgccgggg ttgggcgcga agctgcgggc ggggccgtgc tcgaagccct
     2641 ggtccacggg caggatcacg aacttgcccg tgccggcgag acggccggtg ttcatcatgc
     2701 gggccaggtt ggccttcaca ccggggtttt ccgagctgta ccaggacagg atctcgcgga
     2761 ctttggccgt ggccatgaca tcacctctca gggattccaa acggccattc tacctggggt
     2821 ggattagaaa tggaccgtca ggctggcgcc cagtcccatg tccgcggtgt tgccgctgtg
     2881 ggtgatgttg ttcaggtagc ggagggtcag ggtggtgcgc ggcgtccagt gccagtgcag
     2941 acccaggtcg tgctggaggc tgggccggtc gaagtgctgg taggcctgcg gctgcaggta
     3001 gccgctctgc cagtagagct ggaggaaggg ctggaccctc ggccagcggc ggtattccca
     3061 ggtggcgtgg gctcccacgc cgtcccggta gcccacctcc gtgtaggcgg ggctgccgtg
     3121 gggtcgttgc acgaagcccg cgccgaagta gaaggcgtgg cgcccggagc cccgccaggc
     3181 gccggagatc ccgtagctct ggtcccaccc cgagcggtag gcatcgtagg tgcgggttag
     3241 cgggggtttc aggctgaagg ccaccgacag ggtccacgag ccctcggcca gcaggcggcg
     3301 agtcaggccc agcaccggat cctgggtctt gcccagcacc cgctcatcgc tgaagaaggt
     3361 gacctttccg taccgggcca ccaccagcgc gagctggttc tgcaggacca ggtcccggcc
     3421 gtactgttcg aagcccagcc tgtggaagtc ctcgatgagc ggatccagga accctcccgt
     3481 gtggttctgg accggcaacc ggaaccagag gtccgtgcgg tcgtcgaggc cgtaccgccc
     3541 ctcgagctct aagcgggaga tctcctcgtc gaagaaatag accatgggga ggctggcgta
     3601 gtccgccatg tgcgcgtcca cgaaggcccg ggtgacggcc acgcggcccg aggaatcccg
     3661 gggtggattc tgctcgaaca catcggagaa ctggaaggtg ttggcctgga tgtggtgcat
     3721 ggcccaccgc cagcggccag gaccgagcgg cacgggatcc gccggctggt aggccatggt
     3781 gggcaagtac atggggaaca tctcccgggt ggggaagggg cccatctcgt ggaggggctc
     3841 ctccgccgtc aaccccaggc ccgccaggag aaccaggccc acccggcgca tcacaccttc
     3901 agatcaggcc ttgctgtagt cgtagaagcc gcggccgctc ttcttgccca gccagccggc
     3961 atccacgtac ttgatgagca gggggcaggg gcggtacttg ggatcgccga ggccctcgtg
     4021 cagcacgttg aggatgaaga ggcaggtgtc cag
//
LOCUS       DASUDT010000010         7779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_840209, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000010 DASUDT010000000
VERSION     DASUDT010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7779
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840209"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VFV26_00205"
     CDS             complement(<1..291)
                     /locus_tag="VFV26_00205"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844605.1"
                     /translation="MDAIQIETGPRPQAAVIWLHGLGADGHDFEPIVPELELPKPVRF
                     VFPHAPIRPVTINNGMRMRAWYDIFEFGGGSEDEAGIRDSQQLIEGLIERERG"
     gene            309..1778
                     /locus_tag="VFV26_00210"
     CDS             309..1778
                     /locus_tag="VFV26_00210"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX4844606.1"
                     /translation="MNQASDSAAAAATSAAAAAAKKAGQDGKWLFTLDGPSIWPFLEY
                     AQNRELRKRILTGYLERCNQGGETDTNAIVAKVAALRVEKAQLLGYKTWADFVLEENM
                     AKDPKGVYGLLDQIWKPALEVAKKERAELQAMMAKDLPGEKLEAWDWRFYAKKVQQAK
                     YDFDEESVKPYFAVDQVREGAFAVANKLYGVTFTEVKGIPVYQKDVRCFEVKEKDGRH
                     LGLIYVDYHPRPGKRGGAWMSSYRSPWVKDGKQIDPVVVNVCNFTPPSGDRPALLTSD
                     EVQTLFHEFGHGLHGLFYKGRYRGTAGTPRDFVELPSQVMENWAMEPEVLKLYAKHYK
                     TGEVIPEALVAKMTKAAKFGQGFATVEYMAASLLDMDWHTLTTTKPQDTAAFEKASLA
                     KWGLIEEIPPRYRSPYFNHIMGGYAAGYYSYIWSAVLDTDAFQAFKEKGNLFDPATAA
                     AFRAEVLSRGGMIDPAQLYRNFRGRDPKVGPLLEKRGLK"
     gene            complement(1786..2316)
                     /locus_tag="VFV26_00215"
     CDS             complement(1786..2316)
                     /locus_tag="VFV26_00215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844607.1"
                     /translation="MNLLPILLAAAAISLPAQEAALGARVHGLLPMGDLRSLTGNQVG
                     LGLAAFVDIPVGRGLVLRPAVGAQHIPRGDALGLGGTQTRVTSVDLMVEALWFPNEDS
                     DRGPYLIGALGGQQWRLSSTGTSPATLSHTRIGASGGLGYQLSPRLGFEARGFWSPIA
                     PAITATGLMVGATVRF"
     gene            complement(2318..2842)
                     /locus_tag="VFV26_00220"
     CDS             complement(2318..2842)
                     /locus_tag="VFV26_00220"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HEX4844608.1"
                     /translation="MNDLDLRASKIRLLCTDIDGVLTTGALHYGAEPGHTKAFHVRDG
                     AAIKWLQRAGLPVAFISGLDAGATVNRARDLGVEDCFAGYLDKLPVLDRLCAKYGLAY
                     DQVAHLGDDLPDLPLLRRVGLACCPSDAVPEVKTACHWVADVPGGHGLLRAVAERILK
                     AQGRWADILAKYEV"
     gene            3035..3364
                     /locus_tag="VFV26_00225"
     CDS             3035..3364
                     /locus_tag="VFV26_00225"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4844609.1"
                     /translation="MNHQLSNPMIEEVSGLFSALGDASRLKILRSLLDTKGPLSQGAV
                     AEAAGLSQANASKHLACLVRVGLVSREPEGNAVYFTPVMPLVGELCDLVCGHVSDRAK
                     MTYKALK"
     gene            3411..4733
                     /locus_tag="VFV26_00230"
     CDS             3411..4733
                     /locus_tag="VFV26_00230"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4844610.1"
                     /translation="MSIKLVTGLGLALLAEGGLMAQGGLTVAESIQRAWAGQAGLRAG
                     QALVDARQAEAEGFRDLRLPSLTLRAQGIRTNEPMMAFGIKLNQARIGAADFNPQSLN
                     HPEAIGAYGGSAVIQQPLYAGGRISAARRAGDYLAQAEAASQERRKQETAQAVVEAYF
                     GTQVAEQALRWAEDSRSWIQGMEDFVDARVKQGLMLESERQRLKALHAQIDAQRADAT
                     RQVRSARSGLGLLTGTGPVEGPLATPLEPVEPVDSGTPLPSGQRGDLQAADLQARAAA
                     EGAKAARGSLRPEVGLEVGAGTLHHAWADKGNWTWAAVGVTWKVFSAPDQAKARAARA
                     QERAASDMRVFKQQQAEHEIRVARESVLAAQARHAAAKESLAAAEESKRLREARHREG
                     LAPLIEVLDAEAAIQGARTLLLQSLYELRVSRASLDLATGTPIEGVKP"
     gene            4832..5749
                     /locus_tag="VFV26_00235"
     CDS             4832..5749
                     /locus_tag="VFV26_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4844611.1"
                     /translation="MAVSLVAQGSPEGGAWVAATLQSTRTAMLSTRMAAQVKRVLAQE
                     GQRVAAGTLLIALGDEDLQGQLKAAETGLATIEAHHRRIQALQAQKASTLSELEQVQA
                     QVAQAQAGVSALRANIAYTQIRAPFGGVVQSRKVNEGDFVGPGMPLLELVGEGEQELV
                     ATLSDQESRGLKTGAKVAFEAEGASGEAQITALAPGGDAATHKGILRAKVLRPKGLRQ
                     GSFARILLPGAAGPQGLSVPRSALVQRGELTGVFIAREGQAELRWISLGEGAGSFLPV
                     RSGLKGGERIIDHPGALQDGQPIEVSHGK"
     gene            5739..>7779
                     /locus_tag="VFV26_00240"
     CDS             5739..>7779
                     /locus_tag="VFV26_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4844612.1"
                     /translation="MASSPHLGLAGRLAKGFLRSKLTPLLVLASLLLGLLAVWLTPRE
                     EEPQIVVPMVDLYIPYPGASPKEVESQVATPLERRLWGIPGVEYLYSVSRPGMALITV
                     RFKVNEPQEPSLVKVHQELAANPQLLPPGAMKPIVKLQTIDDVPFLVLTLHGQDETPG
                     QLRQVADVLGQELSHVPNTAQVKVLGGARRMVRIEPDPDRLRSLGMSLGELQPALQSA
                     VAQLPAGALVDGGKRTELEATGFVLQASELRRLVVGVRNQKPVYLGDVARVVDAPEPE
                     PPIVLFGDAARPGFDHAASVTLSKRAGTNATALAEQVLAKVEALRGNLIPRDLKVTVT
                     RNYGETAGDKSNELIEHLLIATLSVIALILLAMGWRSAVVVGIAVPVTLALTLLLTYL
                     FGYTLNRVTLFALIFSIGILVDDAIVVVENIHRHLHLPGQRKSFARMVVEAVDEVGNP
                     TILATFAVIAAILPMAFVRGLMGPYMRPIPVGASLAMIFSLVIAFVISPWASMIVFRK
                     EAHLPETDASGLHPGTPETVAPDPAQHHPGPDEVPETRFTQLYRKVMHALLTQARVRW
                     MFFGGVVALLLGAMSLVGFGVVKVKMLPFDNKSEFMVQLDLPAGTPREDALAVGQDLA
                     RRLLKEPTVKDVQVYAGEAAPFTFVGMVRHSFLRNEAEMVDLQVNLVDKGDRKEQS"
BASE COUNT         1273 a         2686 c         2704 g         1116 t
ORIGIN      
        1 gccgcgctcg cgctcgatca gcccctcgat gagctgctgc gagtcgcgga tcccggcctc
       61 gtcctcgctg ccgccaccga actcgaagat gtcgtaccag gcgcgcatgc gcatgccgtt
      121 gttgatcgtg accgggcgga tcggcgcgtg cgggaagacg aagcgcaccg gcttcggcag
      181 ctcgagctcc ggcacgatcg gctcgaagtc gtggccgtcg gcgccgaggc cgtgcagcca
      241 gatgaccgcg gcctgcggcc gcgggcccgt ctcgatttgt atggcgtcca tttttctaga
      301 ggatgcggtt gaaccaggcg agcgacagcg ccgcggcggc ggccaccagc gcggcggccg
      361 ccgcggcgaa gaaggcgggc caggacggga agtggctctt caccctggac ggccccagca
      421 tctggccctt cctggagtac gcccagaacc gcgagctgcg gaagcggatc ctcacgggct
      481 acctggagcg ctgcaaccag ggcggcgaga cggacaccaa cgccatcgtg gccaaggtcg
      541 cggccctgcg cgtggagaag gcccagctgc tgggctacaa gacctgggcg gacttcgtcc
      601 ttgaagagaa catggcgaag gatcccaagg gcgtctacgg cctgctggac cagatctgga
      661 agccggccct ggaagtggcg aagaaggagc gcgcggagct gcaggccatg atggccaagg
      721 acctgccggg cgagaagctc gaagcctggg actggcgttt ctacgccaag aaggtgcagc
      781 aggccaagta cgacttcgat gaggaatcgg tgaagcccta cttcgccgtg gaccaggtgc
      841 gcgaaggcgc cttcgcggtg gcgaacaagc tctacggcgt gaccttcacc gaggtgaagg
      901 gcatccccgt ctaccagaag gacgtccgct gcttcgaggt gaaggagaag gacggccggc
      961 acctgggcct catctacgtg gactaccatc cccggcccgg caagcggggc ggggcctgga
     1021 tgagcagcta ccgctccccc tgggtcaagg atggcaagca gatcgacccc gtggtggtga
     1081 acgtctgcaa cttcaccccg ccctccggcg accgtcccgc cctgctgact tcggacgagg
     1141 tgcagacgct cttccatgag ttcggccacg gcctgcacgg cctcttctac aagggccgct
     1201 accgcggcac ggccggcacg ccccgggact tcgtggagct ccccagccag gtcatggaga
     1261 actgggccat ggagcccgag gtgctgaagc tctacgcgaa gcactacaag accggcgagg
     1321 tgatccccga agcgctggtg gcgaagatga ccaaggccgc caagttcggc cagggcttcg
     1381 ccacggtgga atacatggcc gcgtccctgc tggacatgga ctggcacacg ctcaccacca
     1441 ccaagcccca ggacaccgcc gccttcgaaa aggcctcgct ggccaagtgg ggtctcatcg
     1501 aggagattcc gccccgctac cgcagcccct acttcaacca catcatgggt ggctacgccg
     1561 cgggctacta cagctacatc tggagcgccg tgctggatac ggacgccttc caggccttca
     1621 aggagaaggg caacctcttc gatcccgcca cggcggcggc gttccgcgcc gaggtgctgt
     1681 cccggggcgg catgatcgat ccggcccagc tctaccggaa cttccgcggc cgcgatccca
     1741 aggtggggcc cctgctcgag aagcgcgggc tgaagtaggt cccggctaga accgcaccgt
     1801 cgcgccgacc atcaggcctg tggccgtgat ggccggcgcg atggggctcc agaagccgcg
     1861 ggcttcgaag cccaggcggg gactgagctg gtagcccagg cccccgctgg cgccgatgcg
     1921 cgtgtgggag agggtggcgg gtgacgttcc cgtggaggac aggcgccact gctggccccc
     1981 cagggcgccg atgaggtagg gcccgcgatc ggagtcctcg ttggggaacc agagggcttc
     2041 caccatcaga tccaccgagg tgacgcgggt ctgggtgccg cccaggccca gcgcgtcgcc
     2101 tctggggatg tgctgggcgc ccacagcggg gcgcagcacc aggccccggc ccacggggat
     2161 atccacgaaa gccgccaggc cgaggccgac ctggttgccg gtgagggagc gcagatcgcc
     2221 catgggcagc aggccgtgga cgcgggcgcc gagggcggcc tcctgggcgg gaagggatat
     2281 ggcggcggca gccagcagga tggggagcag gttcatgtca gacctcgtac ttggccagga
     2341 tgtcggccca gcggccctgg gccttgagga tgcgctccgc cacggcccgc agcaggccgt
     2401 gtccgccggg cacatccgcc acccagtggc aggcggtctt cacctccggg acggcatccg
     2461 aggggcagca ggccaggccc acgcggcgaa gcagcggcag gtccggcagg tcgtccccca
     2521 gatgcgccac ctgatcgtag gccaggccgt acttggcgca gagccggtcg agcaccggga
     2581 gcttgtccag gtatccggcg aagcagtcct ccacgcccag gtcccgggcc cggttgacgg
     2641 tggcgcccgc atccagcccc gagatgaagg ccacggggag gcccgcccgc tggagccact
     2701 tgatggcggc gccgtcgcgg acgtggaagg ccttggtgtg gcccggttcc gccccgtagt
     2761 ggagggcgcc ggtggtgagg accccgtcga tgtcggtgca gaggagacgg atcttggagg
     2821 cgcgcaggtc caggtcgttc acggggggaa tctcctccgc cagcctacca agcctgccgg
     2881 gatcatgatg ggcgtcaccg atcttcccga aaacggcaca gtgatggaat gttggttgcc
     2941 gaatgatctg atgggtatac agtttctcag gccgaggttt ttctggttga caaaacagga
     3001 aaccagatga acatagtcgc atggagttta tttcgtgaac caccagctca gcaacccgat
     3061 gatcgaagaa gtgagcggcc tcttcagcgc cctgggcgat gcgtcccggc tgaagatcct
     3121 gcgctccctt ctcgacacca agggacccct gagccagggt gccgtggcgg aagccgcggg
     3181 cctgtcccag gccaatgcct ccaagcacct ggcctgcctg gtgcgcgtgg ggctcgtgag
     3241 ccgcgaaccc gagggcaacg ccgtgtactt caccccggtc atgcccctgg tgggcgagct
     3301 gtgcgacctc gtctgcggcc acgtgagcga tcgcgccaag atgacctaca aggcgcttaa
     3361 gtgaatgatt ctatgtgcag ttgctttttt ttgactagga gtattccttt atgagcatta
     3421 aactcgtaac gggattgggg ttggcgctgc tggccgaggg cggactgatg gcgcagggtg
     3481 gcctgaccgt ggccgaatcc atccagaggg cctgggcggg acaggcgggc ctccgggcgg
     3541 gccaggccct ggtggacgcc cgccaggcgg aggccgaggg cttccgcgac ctgcggctgc
     3601 ccagcctcac gctgcgggcc cagggcatcc gcaccaacga acccatgatg gccttcggca
     3661 tcaagctgaa ccaggcgcgc atcggggcgg cggacttcaa tccccagtcc ctgaaccatc
     3721 cggaggccat cggcgcctac ggcggctccg ccgtgatcca gcagcccctc tacgctggcg
     3781 gccgcatcag cgccgcccgg cgggccgggg actacctggc ccaggccgag gccgccagcc
     3841 aggagcgccg caagcaggag acggcccagg cggtggtgga ggcctatttc ggcacccagg
     3901 tggccgagca ggcgctccgg tgggcggagg attcccggtc ctggatccag ggcatggagg
     3961 acttcgtgga cgcccgggtg aagcagggcc tgatgctgga atccgaacgc cagcgcctga
     4021 aggccctcca tgcccagatc gacgcccaga gggcagacgc cacccggcag gtgcgctcgg
     4081 cccgctcggg cctgggcctg ctcaccggca ccggcccggt ggaagggccg ctggccaccc
     4141 cgctggaacc cgtggagcct gtggattccg gaactccgct gccctccggc cagcggggag
     4201 acctgcaggc cgccgatctc caggccaggg ccgccgccga gggggccaag gccgcgcggg
     4261 gcagcctccg ccccgaggtg ggcctggaag tgggcgcggg cacgctgcac catgcctggg
     4321 cggacaaggg gaactggacc tgggccgccg tgggcgtgac atggaaggtg ttctctgcgc
     4381 cggaccaggc gaaagcgagg gccgcccgcg cccaggaacg cgccgccagc gacatgcggg
     4441 tgttcaagca gcagcaggcg gaacacgaga tccgcgtggc gcgggaatcc gtcctcgccg
     4501 cgcaggcccg ccatgccgcc gccaaggaat ccctggccgc cgccgaggaa tccaagcgcc
     4561 tgcgggaggc ccgccaccgg gagggcctgg cgccgctcat cgaggtgctc gacgcggaag
     4621 ccgccatcca gggtgcccgc accctactgc tccagagcct ctacgagctg cgcgtgagcc
     4681 gcgcgagcct cgacctggcc accggcacgc ccatcgaagg agtgaagcca tgaagtcagc
     4741 atttgtgttt gccattctgg gtgcggcgtt gctcgggaat ctcgcttgcg gaagcaagcg
     4801 ggattcccga gtggaaaagg aactgcccaa agtggccgtt tccctggtgg cccaggggtc
     4861 gccggagggc ggcgcctggg tggccgccac gctgcaatcc acccggacgg ccatgctctc
     4921 cacgcgcatg gcggcccagg tgaagcgcgt gctggcccag gaaggccagc gcgtggccgc
     4981 cgggaccctg ctcatcgccc tcggcgacga ggacctgcag ggccagctga aggccgccga
     5041 gaccggcctg gccaccatcg aggcccacca tcgccgcatc caggccctcc aggcccagaa
     5101 ggcgagcacc ctttcggagc tggagcaggt gcaggcccag gtggcccagg cccaggccgg
     5161 cgtctcggcc ctcagggcca acatcgccta cacgcagatc cgggcaccgt ttggcggcgt
     5221 ggtgcagtcc cgcaaggtga acgaaggcga tttcgtgggg cccggcatgc ctctgttgga
     5281 gctggtgggc gagggcgagc aggaactggt cgccaccctg tcggaccagg agtccagggg
     5341 cctgaagacc ggcgccaagg tggccttcga agccgagggc gcctcgggcg aagcccagat
     5401 cacggccctg gcccccggcg gcgacgccgc cacccacaag ggcattctgc gggccaaggt
     5461 gctcaggccc aagggcctcc gccagggctc cttcgcccgc atcctgctgc ccggcgcggc
     5521 aggtccccag ggcctctccg tgccccgcag cgccctcgtc cagcggggcg aactcacggg
     5581 cgtgttcatc gccagggagg gccaggcgga actgcgctgg atctccctgg gcgagggcgc
     5641 gggcagcttc ctgccggtgc gctcgggact gaagggcggc gagcggatca tcgaccatcc
     5701 cggcgcgctc caggacggcc agcccatcga ggtgagccat ggcaagtagc ccccacctcg
     5761 ggctcgccgg gaggctggcc aagggcttcc tccgcagcaa gctgacgccg ctgctggtcc
     5821 tcgcctcgct gctgctgggc ctgctcgccg tgtggctcac gccccgcgag gaggagccgc
     5881 agatcgtcgt gccgatggtg gacctctaca ttccctaccc cggggcgagc ccgaaggaag
     5941 tggagagcca ggtggccacg cccctggagc ggcgcctctg gggcatcccc ggcgtcgagt
     6001 acctctacag cgtgagccgg ccgggcatgg cgctcatcac cgtgcgcttc aaggtgaacg
     6061 agccccagga gcccagcctg gtgaaggtcc accaggagct ggcggccaac ccccagctgc
     6121 tgccgcccgg ggccatgaag cccatcgtca agctccagac catcgacgac gtgcccttcc
     6181 tggtcctgac gctccacggg caggacgaga ccccgggcca gctccgccag gtggccgatg
     6241 tcctcggaca ggaactgtcc catgtcccca acacggccca ggtgaaggtt ctcggcggag
     6301 cccgccgcat ggtgcggatc gagccggatc ccgatcgcct gcggtccctc ggcatgtccc
     6361 tcggcgagct ccagccggcg ctccagtccg ccgtggccca gctgcccgcg ggcgccctgg
     6421 tggacggcgg aaagcgcacc gagctggaag ccaccggctt cgtgctccag gcctcggaac
     6481 tgcgccgcct cgtggtgggc gtgcgcaacc agaaacccgt ctacctgggc gatgtggccc
     6541 gggtggtgga cgcgccggaa ccggaaccgc ccatcgtcct gttcggggat gcggcccggc
     6601 ccggcttcga ccatgcggcg agcgtcaccc tctccaagcg cgccggcacc aacgccacgg
     6661 ccctggcgga gcaggtgctg gccaaggtgg aggccctgcg gggcaacctc attccgcgcg
     6721 atctcaaggt cacggtgacc cgcaactacg gcgagaccgc cggagacaag tccaacgagc
     6781 tcatcgagca cctgctcatc gccaccctca gcgtcatcgc cctgatcctc ctggccatgg
     6841 gctggcgcag cgccgtggtg gtgggcatcg ccgtgcccgt cacgctggcc ctcaccctgc
     6901 tcctcaccta cctgttcggc tacacgctga accgcgtcac cctgttcgcg ctcatcttct
     6961 ccatcggcat cctggtggac gacgccatcg tggtggtgga gaacatccac cggcacctgc
     7021 acctgccggg ccagcgcaag agcttcgccc ggatggtggt ggaggccgtg gacgaggtgg
     7081 gcaaccccac catcctggcc accttcgcgg tcatcgccgc catcctgccc atggccttcg
     7141 tgcggggcct gatgggcccc tacatgcgcc ccattccggt cggcgcgagc ctggccatga
     7201 tcttcagcct ggtcatcgcc ttcgtcatca gcccctgggc cagcatgatc gtgttccgca
     7261 aggaggccca cctgccggag acggacgcgt cgggcctcca cccgggcacg ccggagacgg
     7321 tggccccgga tccggcccag catcacccgg ggcccgacga agtgcccgag acccgcttca
     7381 cccagctcta ccggaaggtc atgcacgccc tgctgaccca ggccagggtc cgctggatgt
     7441 tcttcggcgg cgtggtggcc ctgctcctgg gggccatgtc cctggtgggc ttcggcgtgg
     7501 tcaaggtgaa gatgctgccc ttcgacaaca agtcggagtt catggtgcag ctcgacctgc
     7561 ccgccgggac accccgggaa gacgccctcg ccgtgggcca ggaccttgcc cgccgcctgc
     7621 tgaaggagcc cacggtcaag gatgtgcagg tctacgccgg cgaggccgcg cccttcacct
     7681 tcgtgggcat ggtgcgccac agcttcctgc gcaacgaggc cgagatggtg gacctccagg
     7741 tgaacctggt ggacaagggc gaccgcaagg agcaaagcc
//
LOCUS       DASUDT010000011         6265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1237890, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000011 DASUDT010000000
VERSION     DASUDT010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6265
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237890"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..516
                     /gene="ruvX"
                     /locus_tag="VFV26_00245"
     CDS             79..516
                     /gene="ruvX"
                     /locus_tag="VFV26_00245"
                     /inference="COORDINATES: protein motif:HMM:NF015607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEX4844613.1"
                     /translation="MRWLAIDHGTKKIGLAFSDELEILASPFEVWPQEDERTLDRLVT
                     LCKEEGVQALCVGLPRHKDGAESATAPAARAFGEALADRTGLPLRFANEHLSSAEAER
                     LLRERGVKPERRKLLLDAAAAAVILGELLEARRAKGIPATELD"
     gene            complement(517..1167)
                     /locus_tag="VFV26_00250"
     CDS             complement(517..1167)
                     /locus_tag="VFV26_00250"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4844614.1"
                     /translation="MIGQPLSIQGLHKTYPGNAHPVFDGFDLEVEAGSLCAIVGVSGV
                     GKTTLLNCVAGLDHWEAGGITIGGDPVPEGAEARALYRRRRVGLAFQQPHLLPEFTVR
                     ENLRMPLLIEGDVAPEAEAWIGQLLSTVGLGDLGERLPGQLSGGQAARAGLARALVRK
                     PALWLLDEPTGNLDPATAEEVFGFLMGLHAELRPTTLLVTHNPGLAERCMRTVRLG"
     gene            complement(1412..2638)
                     /locus_tag="VFV26_00255"
     CDS             complement(1412..2638)
                     /locus_tag="VFV26_00255"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4844615.1"
                     /translation="MPLFERTIADRYLKTHRKGAFVRIMVRFARGGTALGVFAMVTTL
                     AVMNGFREEIQATLFSATAHFTVFHLAGDIPDSGASLKAVRAVPGVQAASPIRLEKGL
                     LRRAGSEMPPEAVVVKAVDPASAHGTSSIFDSMQPAPIEHLKEGEIILGKELAQRLSL
                     QVGDTVALAVFRLELGLGGQQPKVAAFRVAGTFHSHSSEYDKAWAFIHLGDAMRLARS
                     EGRAEMIEVRARSIDAIADVKPRVLEALGPAFHATDLRESNRALFAALMVEKWAFAAI
                     LSLIVLVAAFNIVASLVLLVTEKRRDLGVLLALGATPRQIQRLFELQGLRIGAVGTAW
                     GLGVSVPLCLVLDHFRLLKLPAAVYDFITYMPFRLKVLDILLVAVFPLLVSWLAARYP
                     AKKAAALDPVDALRAE"
     gene            complement(2669..4021)
                     /locus_tag="VFV26_00260"
     CDS             complement(2669..4021)
                     /locus_tag="VFV26_00260"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844616.1"
                     /translation="MALDDAMNGSRVHMAMFGLKKSKPSEGSDLVLAYLEEAQRVRTT
                     LTLIDGKGREVAATLTSVSDDRISLNTQGPLSAEKGAGMSLVFLLDGLRFKAESKLVD
                     VKPGSAVLDLPAAIALAERRRKPRARLNAREGATATALTSLFDGVGISGPIENISEGG
                     VCIRVERAMEVKTQRKMHMGPNLLAVGQPMMLVKLSKIPKSPPIELGGTVAYLDASQG
                     LLVGIAFEPGKESLLAPVRALVASRTTAIPTSVPPKARRQPEAEREAEEPVHRPAPRK
                     EPEPVSEPDPKPAPPVPAAPPAPAPEAGAPPESTPHHDERSQALLRVKKRTRSLLLAM
                     PEGPDRDRLAAYLSEDGYGHVRCADTLTDLLECLDRPPIHLILVDGGVAELQGLALAS
                     LLQHRLGEEMPPVILAEASVDAELVLGAQETGVAQILVKPYEPDADFAHMIEEHLGIG
                     "
     gene            4063..5256
                     /gene="hflX"
                     /locus_tag="VFV26_00265"
     CDS             4063..5256
                     /gene="hflX"
                     /locus_tag="VFV26_00265"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX4844617.1"
                     /translation="MAEIPPRCLLIARQGPEDREDHIQDHLLELAELARSCGFGVQAR
                     RILKRSQIATRTFYGSGQLEALADEAARQGVSHLICDDELSGSQVNAIVKLTSLVCLD
                     RTGLILSIFEQRAQTREAKAQVELARLEYELPRLKGAWTHLERQGGGVGLRGGPGETQ
                     IEVDRRMVRTRISQLKRELTHLEQVRETQRLGRPKGLPRVALVGYTNAGKTSLLKALT
                     GEGEPRDLLFATLDTTTRKAWLGQDFDPETGEGVLEPRHCLVADTVGFIRKLPHQLVA
                     AFRSTLGEVRTADALLVVADAAHPDLEDHLKVVGATLREIGCAPEDDGAQPRLLVLNQ
                     VDRLHRPQKLELKKRHPGAVQACALQGTGVPEIRSWLRELIPGPPRPRELEDWELPES
                     RPEIA"
     gene            complement(5253..5768)
                     /locus_tag="VFV26_00270"
     CDS             complement(5253..5768)
                     /locus_tag="VFV26_00270"
                     /inference="COORDINATES: protein motif:HMM:NF025046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEX4844618.1"
                     /translation="MSPSILRRLDRVSASLLLLWAGAALGFGAFAAPLLFQELPSRDV
                     AGRIAGLIIGRLDWAAWAAFGLAGLSWGARWMAEVKEELIGPMRLWSAGWLVAMLMCL
                     ASAFIVTPKVRAIRARIGAPIETLAPDHGDRVAYNKAHGLSRNLFFLRILLALGLAAT
                     VSTLPRKDETA"
     gene            complement(5791..6192)
                     /locus_tag="VFV26_00275"
     CDS             complement(5791..6192)
                     /locus_tag="VFV26_00275"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX4844619.1"
                     /translation="MRLSPARQRGFTLMELLVVMTIMALLATVGLAGYRYKTAVAREA
                     VLKENLFQINHALEQYRADRGKYPSSLGPLRELGYLREIPWDPITQSRDTWQLELEPP
                     DPDNPEAETGVFRVRSGSTDKGTNQIPYNEW"
BASE COUNT          949 a         2120 c         2305 g          891 t
ORIGIN      
        1 ccgtccaggc caggcgcatc cggcccaggg cggtggtgaa ggtgatgaaa cggccgggca
       61 tgccgctagg atggcaggat gcgctggctt gccatcgacc acggcacgaa gaagatcggc
      121 ctcgcctttt cagacgagct ggagatcctg gcctccccct tcgaggtgtg gccccaggaa
      181 gacgaacgca ccctggaccg gctcgtgacg ctctgcaagg aggagggcgt gcaggccctt
      241 tgtgtgggcc tgccgcgcca caaggacggg gccgaaagcg ccacggcgcc ggcggcccgg
      301 gccttcggcg aggccctggc ggaccggacg ggcctgcccc tgcgcttcgc caacgagcac
      361 ctcagcagcg ccgaggccga gcgcctgctg cgggagcggg gtgtgaagcc cgaaaggcgg
      421 aagctcctgc tggatgcggc agcggcggcg gtgatcctgg gcgagctgct ggaggcccgg
      481 cgggcgaagg ggatccccgc gactgagctg gactgatcag cccagcctga ccgtccgcat
      541 gcagcgctcg gccaggccgg ggttgtgggt gacgagcagg gtggtggggc gcagctccgc
      601 gtggaggccc atcaggaatc cgaagacctc ttccgccgtg gcgggatcga ggttgcccgt
      661 gggctcgtcc agcagccaga gggcgggttt gcgcaccagg gcccgggcca ggcccgcccg
      721 ggcggcctgg ccgccggaga gctggccggg caggcgttcg cccaggtcgc ccaggcccac
      781 ggtggacagc agctgtccga tccaggcctc ggcttctggg gccacatcgc cctcgatgag
      841 cagcggcatg cgcaggttct cccgcacggt gaattctggc agcaggtggg gctgctggaa
      901 ggccaggccc acgcggcggc ggcggtagag ggcccgggcc tcggcgcctt cgggcacggg
      961 gtctccaccg atggtgatgc cgccggcttc ccaatgatcg aggcccgcca cgcagttcag
     1021 cagggtggtc ttccccacgc ccgacacgcc cacgatggcg cagaggctgc ccgcctcgac
     1081 ctcgaggtcg aagccgtcga agaccggatg ggcgttgccg ggataggtct tgtgcaggcc
     1141 ctggatggaa aggggttgtc cgatcatggc gcctcgcacc cagagctagg gatccaccac
     1201 gggggcacgg agcccactga ggcctcacgg agccctccgt gcttcctctg tgcatgggct
     1261 ggccgaaggc ccattccggc agagccggaa tggactgact gcaccgggcc cagatccccc
     1321 ttcaaggatc cgggcccggt gcagtcagtc agcccatcct ccgtgtctcc gtggtggatc
     1381 ttgacgagtt ggacgcaaga ccgcacgagc ctcattcggc cctcagcgca tcgacggggt
     1441 ccagggccgc ggccttcttg gcggggtagc gggccgccag ccaggacacc agcaggggga
     1501 agacggccac cagcaggatg tccagcacct tgaggcggaa gggcatgtag gtgatgaagt
     1561 cgtagacggc ggcgggcagc ttcaggagcc tgaagtggtc cagcaccagg cagagcggca
     1621 cgctgacgcc caggccccag gccgtgccca cggcgccgat gcgcaggccc tgcagttcga
     1681 agagccgctg gatctgccgg ggcgtggccc ccagggccag cagcacaccc aggtcgcgcc
     1741 gcttctccgt caccagcagc accagcgagg ccacgatgtt gaaggcggcc accagcacga
     1801 tgaggctgag gatggcggcg aaggcccatt tctccaccat cagtgccgcg aagagggccc
     1861 tgttggactc ccgcagatcc gtggcgtgga aggcggggcc gagggcctcc agcacccggg
     1921 gtttcacatc ggcgatggcg tcgatgctgc gggcgcgcac ctcgatcatt tcggcgcggc
     1981 cctcggaccg ggccagcctc atggcatcgc ccaggtggat gaaggcccag gccttgtcgt
     2041 actcggagct gtggctgtgg aaggtgccgg ccacgcggaa ggcggccacc ttgggttgct
     2101 ggccccccag gcccagttcc aggcggaaga ccgccagggc cacggtgtcc cccacctgga
     2161 ggctgaggcg ctgggccagt tccttgccca ggatgatctc gccttccttc aggtgctcga
     2221 tgggggcggg ctgcatggaa tcgaagatgc tggaggtgcc gtgggcgctg gccggatcca
     2281 cggccttcac caccacggcc tccggcggca tctcgctgcc ggcgcggcgc agcaggccct
     2341 tctccaggcg gatgggggag gcggcctgca cgcccggtac ggcccggaca gccttcaggg
     2401 aagccccgga atccgggatg tccccggcca ggtggaacac cgtgaaatgg gccgtggcgc
     2461 tgaaaagggt ggcctggatc tcctcccgga acccgttcat gacggccagg gtcgtcacca
     2521 tggcgaagac ccccagggcc gtcccgcccc gggcgaagcg caccatgatc cgcacgaagg
     2581 cccccttgcg gtgggtcttc aggtagcggt cggcaatggt gcgttcgaac aagggcatgg
     2641 caccagggta tccgctttga cggcgggcct agccgatgcc caggtgctcc tcgatcatgt
     2701 gggcgaagtc ggcgtccggt tcgtagggct tcaccaggat ctgggccacg ccggtctcct
     2761 gggcccccag caccagttcc gcgtccacgg aggcctctgc caggatcacc ggcggcatct
     2821 cctcgcccag gcggtgctgc agcagggagg ccagggccag gccctggagc tcggccacgc
     2881 cgccgtccac caggatcagg tggatggggg ggcggtccag gcactccagc aggtccgtca
     2941 gggtgtcggc gcagcgcacg tggccgtagc cgtcctcgct gaggtaggcc gccagccggt
     3001 cgcggtccgg gccctcgggc atggccagca ggaggctgcg ggtgcgcttc ttcacacgga
     3061 gcagggcctg ggatcgctca tcatggtggg gcgtggattc cggtggcgcg ccggcctcgg
     3121 gcgcaggggc cgggggggcg gcaggcaccg gcggagcggg cttggggtcc ggttcggaca
     3181 ccggttcggg ttccttccgg ggcgccgggc ggtggaccgg ctcctcggcc tcccgctccg
     3241 cctcgggctg gcggcgggcc ttgggaggca cagaggtggg gatggcggtc gtccggctgg
     3301 ccaccagggc ccgcacgggc gccaggaggg attcctttcc gggttcgaag gcgatgccca
     3361 ccaggaggcc ctggctggca tccaggtagg ccacggtgcc gcccagctcg atgggggggg
     3421 acttggggat cttggagagc ttcaccagca tcatgggctg gcccacggcc aggaggttcg
     3481 gccccatgtg catcttccgc tgggtcttga cctccatggc ccgctccacc cggatgcaga
     3541 cgccgccttc ggagatgttc tcgatggggc cgctgatgcc cacgccatcg aagaggctcg
     3601 tgagcgccgt ggccgtggcg ccctcccggg cgttcagacg ggcccggggc ttccggcggc
     3661 gctcggccag ggcgatggcg gcgggaaggt ccaggaccgc ggaccccggc ttcacgtcca
     3721 cgagcttgga ttcggccttg aagcgcaggc cgtcgaggag gaacaccagg ctcatcccgg
     3781 cccccttttc ggcggacagg ggcccctggg tgttcaggct gatgcggtcg tcggagaccg
     3841 aggtcagggt ggcggccact tcccggccct tgccatcgat cagggtgagg gtggtccgca
     3901 cccgctgggc ctcctccagg taggccagga ccagatcgga tccctccgac ggcttggatt
     3961 ttttcaaccc gaacatggcc atgtggaccc ggctcccgtt catcgcatcg tccagagcca
     4021 tgagggcttg attattgccg cccggcacgg cagctttgcc ttatggccga aatccctccc
     4081 cgctgtctgc tcatcgcccg ccagggcccc gaggaccggg aggaccacat ccaggaccac
     4141 ctcctggaac tggcggaact ggcccgcagc tgcgggttcg gggtccaggc ccggcggatc
     4201 ctgaagcgct cccagatcgc cacccggacc ttctacggct ccgggcagct ggaggccctg
     4261 gcggacgagg ccgcccgcca gggggtgagc cacctcatct gcgacgacga gctgagcggc
     4321 agccaggtga acgccatcgt gaagctcacg agcctcgtct gcctggaccg cacgggcctc
     4381 atcctcagca tcttcgagca gcgggcccag acccgggagg ccaaggccca ggtggagctg
     4441 gccaggctcg agtacgaact gccccgcctc aagggcgcct ggacccacct ggagcgccag
     4501 ggcggcggcg tgggcctgcg cggggggccc ggcgaaaccc agatcgaggt ggaccgccgc
     4561 atggtccgca cccgcatcag ccagctcaag cgggagctca cccacctgga gcaggtgcgg
     4621 gagacccagc gcctgggccg ccccaagggg ctgccccggg tggccctggt gggctacacc
     4681 aacgcgggga agaccagcct cctgaaggcc ctcacgggcg aaggcgaacc ccgggacctg
     4741 ctcttcgcca ccctggacac caccacccgc aaggcctggc tgggccagga cttcgatccg
     4801 gaaaccggcg aaggcgtcct ggagcccagg cactgcctgg tggcggacac cgtgggcttc
     4861 atccgcaagc tgccccacca gctggtggcg gccttccgca gcaccctggg cgaggtccgc
     4921 acggcggacg ccctgctggt ggtggccgac gcggcccatc cggatctgga ggatcacctc
     4981 aaggtggtgg gggccaccct gcgcgagatc ggctgcgcgc ccgaagatga cggcgcccag
     5041 ccccggctcc tggtgctgaa ccaggtggac cgcctgcacc ggccccagaa gctggagctg
     5101 aagaagcgcc accccggggc ggtccaggcc tgcgccctcc agggcaccgg ggtgcccgag
     5161 atccgcagct ggctgcggga gctgattccg ggcccgccca ggccccgcga gctggaggac
     5221 tgggagctgc cggaatcccg gcccgagatc gcctaggctg tttcgtcctt ccggggcagc
     5281 gtcgagactg tggcggccag gcccagggcc aggaggatgc gcaggaagaa gaggttgcgg
     5341 ctgaggccgt gggccttgtt gtaggccacc cggtccccgt ggtccggcgc cagggtctcg
     5401 atgggcgcgc cgatgcgggc gcggatggcc cgcaccttgg gcgtgacgat gaaggcgctg
     5461 gccaggcaca tgagcatggc caccagccag cccgcgctcc agaggcgcat ggggccgatg
     5521 agctcctcct tcacctcggc catccaccgg gcgccccagc tgaggcccgc caggccgaaa
     5581 gccgcccagg cagcccagtc caggcggccg atgatcagcc cggcgatgcg gccggccacg
     5641 tcgcggctgg gcagctcctg gaagagcagg ggcgcggcga aggccccgaa gcccagggcc
     5701 gcccccgccc agaggagcag cagggaggcg gagacgcggt caaggcggcg gaggatgctg
     5761 gggctcatgg gttcctgatg gctggaagcc ctaccactcg ttgtagggga tctggttggt
     5821 gcccttgtcc gtggaaccgc tccgcacccg gaacacgccg gtttcggcct cggggttgtc
     5881 gggatccggg ggctccagct ccagctgcca ggtatcccgg gactgggtga tgggatccca
     5941 ggggatctcc cgcaggtagc ccagctcccg gaggggcccc aggctggagg ggtatttgcc
     6001 gcggtctgcc cggtactgct ccagggcgtg gttgatctgg aagaggttct ccttgagcac
     6061 ggcctcccgg gccaccgcgg tcttgtagcg gtaacctgcc aggcccaccg tggccagcag
     6121 ggccatgatg gtcatgacca cgagcagttc catcaaggtg aagccgcgct ggcgggcagg
     6181 ggaaaggcgc atggaattac cttaccttag tcgcgaccgc cgggtggcgg agcaggctcc
     6241 gggggagcct gcggagccgg gaccc
//
LOCUS       DASUDT010000012         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1768112, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000012 DASUDT010000000
VERSION     DASUDT010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768112"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2237
                     /locus_tag="VFV26_00280"
     CDS             <1..>2237
                     /locus_tag="VFV26_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844620.1"
                     /translation="RADAEKRLDETRGNLQRLDDILYELTKQMDSLRRQAARARKAKE
                     LDTAIKATQRVLLAGKAVELEAAKRRVLDDLDQAERRVAELTAQVSEKASEVEALRLS
                     VDEQQQAQAKRASAMLGLDQRLQLADQERSFQEDRRVEARDHRSRLEEHIQALVARLA
                     ESGDSFTSLEAQLKEAGERLALQEAELTKVEEVVALAQGGLRRAEAELQALRERKAEA
                     QKEAVARQKQRLAFQTQIAQLEGRLDTLNHEESVRAPRMESLEAEAGQVDRTLEGLLS
                     QLEQAEEASLDQRRRAEQLEEAQRTLTQDHHRAEAELDAAERRLRQISDLLAKSFGEA
                     ELQKGLTWLREQGARPQTLVDLLTVDEALRPDLERLLGSWLQVLAIDEALAGRAAEAP
                     GHLLLALEADGPHPPAPEGCEPLRAHLKWSGVDRPLGGLLNRAFRCSDEALPALALAH
                     PELAFVSPAFVRLPFGPLQLGVSAPAASPLKLRAEQEEAKGTREALLDRIEDLEARRG
                     RGGDDTRAARERSTEIDEDLRVLRRRADTLKAQRTSLQGQLSEIRSASERADALWGQI
                     ETEIKGLQGQLRELEVHPEEAGDTALEEAIQQAEAQVREARHRLDERRDQRMEAARSR
                     DAVWAERDGHERHLQLAQRGRFDLEAERQRLVGEATELTGRMETCARRLAELESESQG
                     LLQEREGVQAQAQEAQPRLELEQETLRVQERAAREFQGALENARAQHQEVLIHGAQVQ
                     GSQEA"
BASE COUNT          365 a          778 c          857 g          237 t
ORIGIN      
        1 ccgcgccgac gcggagaagc gcctggacga gacccggggc aacctccagc ggctcgatga
       61 catcctctat gaattgacca agcagatgga ttcgctgcgc cgccaggccg cccgcgcccg
      121 gaaggcgaag gagctggaca cggccatcaa ggccacccag cgcgtgctgc tcgcggggaa
      181 ggccgtggaa ctggaggccg ccaagcggcg ggtcctggac gatctggacc aggcggaacg
      241 ccgggtggcc gagctcacgg cgcaggtgtc cgaaaaggcc tccgaagtgg aggccctgcg
      301 cctgtccgtg gacgagcagc agcaggccca ggcgaagcgc gccagcgcca tgctggggct
      361 ggatcagcgc ctccagctgg cggaccagga gcgcagcttc caggaggacc gccgggtcga
      421 ggcccgggac caccggagcc ggctggagga gcacatccag gccctggtgg cgcggctggc
      481 ggaatccggg gattccttca cctcgctgga ggcccagctg aaggaggccg gcgaacgcct
      541 cgccctgcag gaagcggaac tcaccaaggt cgaagaggtc gtggccctgg cccagggcgg
      601 cctccgccgc gccgaggcgg aactccaggc cctgcgggaa cgcaaggccg aggcccagaa
      661 ggaggccgtg gccaggcaga agcagcgcct cgccttccag acccagatcg cccagctgga
      721 aggccgcctg gacaccctca accacgagga atccgtccgc gccccccgca tggaaagcct
      781 cgaggccgag gcgggccagg tggaccgcac cctggagggg ctgctctccc agctcgaaca
      841 ggcggaggag gcctcgctcg accagcgccg ccgcgccgag cagctggagg aggcccagcg
      901 caccctgacc caggatcatc accgggccga ggccgagctg gacgccgccg aacgccgcct
      961 gcggcagatc tccgacctgc tggccaagag cttcggcgag gccgagctgc agaagggcct
     1021 cacctggctg cgggagcagg gcgcccggcc gcagaccctg gtggacctcc tcacggtgga
     1081 cgaggcgctg cgccccgatc tggagcgtct gctgggcagc tggctccagg tgctggccat
     1141 cgatgaagcc ctggcgggcc gcgctgcgga ggccccgggc catctgctgc tggccctgga
     1201 agcggatggg ccccatccgc ccgcccccga aggctgcgag cccctgcggg cccacctgaa
     1261 gtggtcgggc gtggatcgtc ctctgggcgg cctgctgaac cgcgccttcc ggtgttcgga
     1321 cgaggcgctg ccggccctgg ccctggccca tcccgaactg gccttcgtat caccggcttt
     1381 cgtgcggctg cccttcggcc ccctgcagct gggggtgtcc gcgcccgcag cctcgcccct
     1441 gaagctgcgg gcggagcagg aggaggccaa gggcacccgg gaggccctgc tggaccgcat
     1501 cgaggacctg gaggcaaggc ggggccgggg cggcgacgac acccgggcgg cccgggagcg
     1561 ctccacggag atcgacgagg atctgcgggt cctccggcgg cgggcggaca ccctgaaggc
     1621 ccagcggacc tcgctgcagg gccagctgtc ggagatccgc tccgccagcg aacgggcgga
     1681 tgccctgtgg gggcagatcg agaccgagat caagggactg cagggccagc tccgggagct
     1741 ggaagtccat cccgaggagg ccggcgacac ggcgctggag gaggccatcc agcaggcgga
     1801 ggcccaggtc cgcgaagccc ggcatcggct ggatgagcgc cgggaccagc gcatggaggc
     1861 cgcccgcagc cgcgacgcgg tctgggcgga gcgggacggc cacgagcggc acctccagct
     1921 ggcccagcgg ggccggttcg atctggaggc cgagcggcag cggctggtgg gcgaggccac
     1981 ggaactgacc ggccggatgg agacctgcgc ccggcgtctg gcggagctgg aatcggaatc
     2041 ccaggggttg ctgcaggagc gggagggcgt ccaggcccag gcccaggagg cccagccccg
     2101 gctggagctg gagcaggaga ccctgcgggt gcaggagcgg gccgcccgcg aattccaggg
     2161 ggccctggaa aatgcccggg cccagcacca ggaggtgctc atccacggcg cccaggtgca
     2221 gggcagccag gaggccc
//
LOCUS       DASUDT010000013         7080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1458849, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000013 DASUDT010000000
VERSION     DASUDT010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7080
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458849"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1234
                     /locus_tag="VFV26_00285"
     CDS             <1..1234
                     /locus_tag="VFV26_00285"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEX4844621.1"
                     /translation="HRAVFRALRTLIEAQVEVNSLTLKDALDQDGSLNKVGGYPGLVE
                     LLAGEDVERPQILADLIRRKAKLRRLVHLGAQLVRQAAEEDEPPEVLVDQTAQSLFHL
                     AQGDAKAKGLLSIQSVADDAMERLHERLEGRLSPGVRVGFSRFDELTQGFQPGNLIVL
                     AARPGIGKTALALNWILRAAQERDGRTGHCGAFFSLEMSHEEVFMRLLSAQSQTNMKD
                     LQSGRATGRLDHVMRSRDELVQMPLFICDQASITVPQIQNMVVKQGSQSNRRVEFVII
                     DYLQLLSSPENSRGAKQNEAVRIGEISRGLKLMAKDFGIPVVVLSQLNREVEHRQGGR
                     PQLSDLRDSGAIEQDADMVAFIHRKMVPSADGDTDLSSAELIVAKHRNGPTAIIPLHF
                     QGEFAMYREMVRETSSYA"
     gene            complement(1516..2838)
                     /locus_tag="VFV26_00290"
     CDS             complement(1516..2838)
                     /locus_tag="VFV26_00290"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX4844622.1"
                     /translation="MAFDVVMPQMGESIAEATVLKWHKQAGDVIAKDETLYEISTDKV
                     DAEIPAPAAGTLLEILVDVNVTVPVGTVVARIGDASEKPAGAAPAAAAAPSVPAPAAA
                     LSAPAVIEDDNSLEGRLRTKSSPLVREMAKQHGIDLAKVSGSGQGGRVTKEDLEAHLA
                     KGPSAAPAGIAPALPAVHDPSAPTMGLTPALAVAPAPAMPAFAAGERVKVEPMSRMRK
                     IIADGMVASKRTSAHVYTVFEIDMTHVAQLRNKHKKAFEAQFGTKLSFMPFVMMAACK
                     ALRAYPVANASVDGDNIVYKQDINLGVAVSLDWGLIVPVIKNADMMNLGGLARSLNDL
                     AERARAKQLKPDEVSGGTFTITNPGVYGDTFGLPIINQPQVAIQGVGAIVKRPVVITG
                     LDGTDFIAIRQMMFSSLGFDHRIIDGATGDLFMAFAKKELETSTFGLE"
     gene            complement(2848..4308)
                     /gene="gatA"
                     /locus_tag="VFV26_00295"
     CDS             complement(2848..4308)
                     /gene="gatA"
                     /locus_tag="VFV26_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX4844623.1"
                     /translation="MALGTAMDWRRGLDAGSLSSEALVRSALDRIRAQDGNLHAILAT
                     DEPRSLALARAADHRLQAGDRTPVLGLPIVLKDNLHWSGLPMTCGSRILGGYVAPYDA
                     TVVRRLIEAGAVPIAKANLDEFAMGSSGEYSAFGPTRNPWDSSRVPGGSSSGSVVSVA
                     AGYAPLALGSDTGGSVRLPASFCNVTALRPTYGVLSRFGLTAMASSLDQVGPIAATAE
                     DVALAFGVMAGLDPQDSTSVDLPGIERLASLQGADLNGVRIGLPKEYFGEGLEPGVRN
                     LLDEALREFERQGARLVEVSLPHTRYAIDTYYLLCTSEVSSNLSRFDGVRYGLRSPAP
                     HPGMAEMIAQSRDQGLGPEAKRRILLGTFCLSRGYYDAFYLKAMKARTLIAGDFREAF
                     AQVDLLAAPVSPGTAFPFGAKTDDPLAMYLADVFTVPTALAGLPCLSMPAGFTGGLPA
                     GIQLIGPALSDVRLLETAHAFQSATRHHLETPTLSA"
     gene            4518..5264
                     /locus_tag="VFV26_00300"
     CDS             4518..5264
                     /locus_tag="VFV26_00300"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX4844624.1"
                     /translation="MNPFEVLEIPPDASPEDIKAAYHRLAKQWHPDRFSGPGKAEAEA
                     RFRELAEAFSTLKDPGKRLALQQQMPRSAAVPPVKAKEKAPDREAVQERTPEDWAAMA
                     KEAYDEGRVEQARALIHYAIRLDETKAHYHALLATILEREGEDLRAVVKALETAVRIA
                     PRDVDSHLRLATHFQTLGMAARAQRHLQAAQEIAPNHPKLRQPVPKGGKGAKNAPAAG
                     RKGKSPAVPVGQQSLVDQLKDLWGRLTGKG"
     gene            5267..6034
                     /locus_tag="VFV26_00305"
     CDS             5267..6034
                     /locus_tag="VFV26_00305"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEX4844625.1"
                     /translation="MRICAAGKTDVGCVRKHNEDSFLANPDLGLFVVADGLGGHAAGE
                     VASQIVVDTVARFVGDTLEKDRTWPMEYDPSLSYDGNRLKVALLLSDRAIAEDIRRNP
                     ERETMGSTVVAGLFHGPRVTLAHVGDSRAYLLGPEGIRQVTRDHSWVAEQVANGILTA
                     DEARIHPFRNVITQALGNGGDLEIEVQDLELAKTERLLLCSDGLSGMIGDKQIWDIVM
                     QSGDLQVAVEALVTIAREHGGEDNITAVLIGLEPQSV"
     gene            6115..>7080
                     /gene="pilM"
                     /locus_tag="VFV26_00310"
     CDS             6115..>7080
                     /gene="pilM"
                     /locus_tag="VFV26_00310"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HEX4844626.1"
                     /translation="MGLFGSKPKSLVGLDIGSSSVKVCELQQIGKGSQLRYRLQKLGQ
                     VSLPPDAIVDGDIMDSNAVASAIRQILAEQKIKAKDVAISVSGQQVMVKKVTFPLMSQ
                     AELAESVRWEAESFFPAGQGLDSYALDYYLIEERAVDGNMDVVLVACRKDKLEAYVSC
                     VAQAGCSPKVVDVDVFAVQNAYEANTVGGGRDEVVALVNMGATFTNLTMMVGGKSVFW
                     RDMAWGSGRYSEKLMEDWGVTREGAERLKRNQPAEGHNPEEIHPSINAVSDAFADELS
                     RTLDFFKSSFKVDRLDRVLVSGGGSMTHGLMDVLSDRLRVSVDRFN"
BASE COUNT         1237 a         2212 c         2472 g         1159 t
ORIGIN      
        1 ccaccgggct gtgttccggg ccctccgcac gttgatcgaa gcccaggtcg aggtcaactc
       61 cctcaccctc aaggacgccc tggaccagga cggcagcctg aacaaggtgg gcggctatcc
      121 gggcctggtg gaactgctgg cgggcgagga tgtggagcgc ccccagatcc tggcggacct
      181 catccgccgc aaggccaagc tgcgccgcct ggtccacctg ggcgcccagc tggtgcgcca
      241 ggccgcggaa gaggacgagc cccccgaagt gctggtggat cagacggccc agagcctctt
      301 ccacctggcc cagggcgacg ccaaggccaa gggcctgctg tccatccagt ccgtggcgga
      361 tgacgccatg gagcgcctcc acgaacggct ggagggccgc ctgtcgccgg gcgtgcgggt
      421 gggattcagc cgcttcgacg agctgaccca gggcttccaa ccgggcaacc tcatcgtcct
      481 ggcggcccgg cccggcatcg gcaagaccgc gctggccctg aactggatcc tgcgggcggc
      541 ccaggagcgg gacggccgca ccggccattg cggcgccttc ttcagcctcg aaatgagcca
      601 cgaggaggtc ttcatgcgcc tgctctcggc ccagagccag acgaacatga aggacctcca
      661 gtccggccgg gccactggcc gtctggacca cgtcatgcga tcccgggatg agctggtgca
      721 gatgcccctc ttcatctgcg atcaggcctc catcaccgtg ccccagatcc agaacatggt
      781 cgtgaagcag ggcagccaga gcaaccggcg cgtggagttc gtcatcatcg actacctgca
      841 gttgctcagc agccctgaga acagccgggg ggccaagcag aacgaggccg tccgcatcgg
      901 cgagatcagc cgtggcctga agctcatggc caaggatttc ggcatccccg tggtggtgct
      961 ctcccagctg aaccgcgaag tggagcaccg ccagggcggc cggccccagc tcagcgacct
     1021 ccgcgactcc ggcgccatcg agcaggacgc cgacatggtg gccttcatcc accggaagat
     1081 ggttccctcc gcggacgggg atacggacct ctcctccgcc gagctgatcg tcgccaagca
     1141 ccgcaacggc cccacggcca tcatcccgct gcacttccag ggcgagttcg ccatgtaccg
     1201 ggagatggtc cgggagacat cctcttacgc gtgagggggc ggcttctttt gtttttcttg
     1261 tgcgaaaaag cggccacccg gccgcttttt cgcatggctc aatcaagcgg tctactccag
     1321 gccgaaagtc gaagtctcca gctctttttt ggcgaaggcc atgaataggt cgccggtggc
     1381 gccgtcgatg gggggccccc ctccgtgagg ccgaaggccg aatgggagcg ggccccagtg
     1441 gggcccgcga tcgggggctg ccagaagcgg cgtgcgcgcc agcgaagcgc gcgcccagcc
     1501 gcggaggagc atcgactact ccaggccgaa agtcgaagtc tccagttctt ttttggcgaa
     1561 ggccatgaat agatcgccgg tggcgccgtc gatgatccgg tggtcgaagc cgaggctgct
     1621 gaacatcatc tggcggatgg cgatgaagtc ggtgccatcg aggccggtga tgaccacggg
     1681 gcgcttcacg atggcgccca cgccctggat ggccacctgg ggctggttga tgatgggcag
     1741 gccgaaggtg tcgccgtaga cgccgggatt ggtgatggtg aaggtgccgc cgctgacctc
     1801 gtcgggcttc agctgcttgg cgcgggcgcg ctcggccagg tcgttgaggc tgcgggccag
     1861 gccgcccagg ttcatcatgt cggcgttctt gatgacgggg acgatgaggc cccagtccag
     1921 gctcacagcg acgccgaggt tgatgtcctg cttgtagacg atgttgtcgc cgtccaccga
     1981 ggcgttggcg acggggtagg cgcgcagggc cttgcaggcg gccatcatca cgaagggcat
     2041 gaagctgagc ttggtgccga actgggcttc gaaggccttc ttgtgcttgt tgcgcagctg
     2101 ggccacatgg gtcatgtcga tctcgaagac cgtgtagacg tgcgccgagg tgcgcttgct
     2161 ggccaccatg ccgtccgcga tgatcttgcg catgcggctc atgggctcga ccttcacgcg
     2221 ctcgccggcg gcgaaggcgg gcatggcggg ggccggggcc acggccaggg cgggggtcag
     2281 gcccatggtc ggggcggagg ggtcatggac ggcgggcagg gccggggcga tgcccgcggg
     2341 ggccgccgaa ggacctttgg cgaggtgggc ctccaggtcc tccttggtga cgcggccacc
     2401 ctggccgctg ccggacacct tggccaggtc gatgccgtgc tgcttggcca tctcgcggac
     2461 cagggggctg ctcttggtgc gcaggcggcc ctccaggctg ttgtcgtcct cgatcacggc
     2521 cggggcggac agggccgccg caggcgcagg tacggaggga gcggcagcgg ctgccggggc
     2581 ggcaccggcc ggcttctccg aggcgtcgcc gatgcgggcg acgacggtac cgacaggcac
     2641 cgtgacgttc acatcaacca ggatctccag cagggtgccg gccgcggggg cgggaatctc
     2701 ggcgtccacc ttgtcggtgc tgatctcgta gagggtctcg tccttggcga tcacgtcgcc
     2761 ggcctgcttg tgccacttca gcacggtggc ttccgcgatg ctctcgccca tctggggcat
     2821 gacgacgtca aaggccatgg ttcgctccta tgcggacagg gtcggggttt cgaggtggtg
     2881 gcgggtggcg gactggaagg cgtgggccgt ctccagcaga cggacatccg aaagggcggg
     2941 cccgatgagt tggatgccgg ccggcaggcc gccggtgaat cccgcgggca tggacaggca
     3001 ggggagcccg gccagggcgg tggggacggt gaagacatcg gccaggtaca tggccagagg
     3061 gtcatccgtc ttggcgccga aggggaaggc ggtgcccggg ctgacggggg ccgcgaggag
     3121 atccacctgg gcgaaagcct cgcggaaatc ccccgcgatg agcgtgcggg ccttcatggc
     3181 cttcaggtag aaggcatcgt agtagcccct ggaaaggcag aaggtcccga ggaggatgcg
     3241 ccgcttggcc tcggggccca ggccctggtc gcgggattgg gcgatcatct cagccatgcc
     3301 ggggtgcggc gcgggcgacc tcagcccgta gcgcacgccg tcgaagcggc tgaggttgct
     3361 ggacacctcg ctggtgcaga gcaggtagta ggtgtcgatg gcgtaccggg tgtggggaag
     3421 gctcacctcc accagccggg cgccctggcg ttcgaattcg cggagggcct catcgaggag
     3481 gttccggacg ccgggctcca gaccttcgcc gaagtattcc ttcggaagcc cgatgcggac
     3541 tccgttgagg tctgcgccct gaaggctggc cagtcgctcg atgcccggaa ggtccaccga
     3601 ggtgctgtcc tgggggtcga ggccggccat gacgccgaag gccagggcca catcctcggc
     3661 ggtggcggcg atggggccca cctggtccag gctggaggcc atggccgtga ggccgaagcg
     3721 gctcaggacg ccataggtcg gccgcagggc cgtcacattg cagaagctgg cgggcagccg
     3781 caccgagcct cccgtgtcgc tgcccagggc cagtggggca tagcccgcgg cgaccgacac
     3841 gacggaaccg ctgctgctgc ccccgggcac ccgggaggaa tcccaggggt tccgggtggg
     3901 gccgaaggcg ctgtattcgc cgctggagcc catggcgaac tcgtccaggt tggccttggc
     3961 gatggggacc gcgcccgcct cgatcagccg gcgcaccacg gtggcatcgt agggagccac
     4021 atacccgccg aggatgcgcg acccgcaggt catgggcaga ccagaccagt gcaggttgtc
     4081 tttgaggacg atggggaggc ccagcaccgg ggttcggtca ccggcctgga gccggtgatc
     4141 cgcggccctg gccagcgcaa ggctgcgcgg ctcgtctgtg gccaggatgg cgtggaggtt
     4201 cccatcctgg gcccggatcc ggtccaaggc gctgcgcacc agggcttcgg aggacaggct
     4261 cccggcatcc aggcccctgc gccagtccat cgccgtgccc aacgccatgc cctctcccgt
     4321 ggaaccttct actgtgccac cacgccaggg tgtcttccag cctggatcgc catgctggcc
     4381 ttcgcccact ggtgagattc cgccatgttt cgaaatcctt ggggccgcac aggtgatgga
     4441 aataggctac catcctctgc tcaagcccct gtcctccaat cccatcgctg cgtcagcaca
     4501 gggtaccgcg gaatcccatg aatcctttcg aagtgctgga aatccccccg gacgcctcac
     4561 ccgaggacat caaggctgcg taccaccggc tggccaagca gtggcatccg gatcgcttca
     4621 gcggacctgg aaaggccgag gctgaagcca gattccggga actggcggaa gccttcagca
     4681 cactgaagga ccccggcaag cgcctcgcgc ttcagcagca gatgccccgg tctgcagccg
     4741 tgcctcccgt gaaggcgaaa gagaaggccc cggaccgcga ggcggtccag gagcggactc
     4801 ccgaggattg ggcggccatg gccaaggagg cctatgacga gggccgggtg gagcaggcca
     4861 gggcgctcat ccactatgcg atccggctgg acgagaccaa ggctcattac cacgccctgc
     4921 tggccacgat cctggagcgg gaaggcgaag acctccgcgc ggtggtcaag gccctggaga
     4981 cagcggtccg catcgccccc cgggacgtgg acagccacct gcgcctggcg acccacttcc
     5041 agaccctggg catggcagcc cgggcccagc ggcaccttca ggccgcccag gagattgctc
     5101 cgaaccaccc gaaattgcgg caacccgttc ccaaaggggg gaagggggcc aagaacgccc
     5161 ccgcggcggg acgcaagggg aagtctccgg ccgttcccgt cggccagcag tccctcgtag
     5221 atcaactaaa ggacctatgg ggccgattga caggaaaggg ttgatcatga ggatctgtgc
     5281 cgcagggaag actgatgtcg gttgtgtccg gaagcacaac gaggacagct tcctggccaa
     5341 cccggacctg ggccttttcg tggtggccga tggcctgggt gggcacgccg ccggcgaggt
     5401 ggccagtcag atcgtcgtgg ataccgtcgc gcggttcgtg ggagacacac tggagaagga
     5461 ccggacctgg cccatggagt acgatcccag cctgtcctac gacgggaacc ggctgaaggt
     5521 ggcgttgctg ctgtcggacc gggccatcgc ggaggacatc cgccggaacc ccgaacggga
     5581 gaccatggga tccacggtgg tggcggggct gtttcacggg ccccgggtga ccctggccca
     5641 tgtgggcgat agccgggcct accttctggg cccggagggc atccgccagg tgacccggga
     5701 ccacagctgg gtggctgagc aggtggcgaa tgggattctc acggctgacg aagcccggat
     5761 ccaccccttc cggaacgtga tcacccaggc tttgggcaat gggggagacc tggaaattga
     5821 ggtccaggat ctggagttgg ccaaaacgga gcgacttttg ctttgctccg atggcctgtc
     5881 aggaatgatc ggtgacaagc agatctggga catcgtgatg cagtccggag acctccaagt
     5941 agctgtggag gcgctcgtta ccatcgcccg ggaacacggc ggcgaggaca atatcacggc
     6001 ggtcctgatc ggtttggaac cccaatcagt ctgatgcaaa caatagctag ccttgaccta
     6061 atccattccg gcggtaccat ctctaatacc taatttctcc aagtgaggcg tccggtgggt
     6121 cttttcggaa gcaaacccaa aagtcttgtc ggcttggaca tcgggtcgag ctcggtgaaa
     6181 gtctgcgaac ttcagcagat tggaaagggt agtcaactcc gctaccggct tcagaaactg
     6241 gggcaagtga gcctgccgcc cgatgccatc gtggatggcg acatcatgga tagcaacgct
     6301 gtggcgtcag ctatccgtca gatcctggca gaacagaaaa tcaaagccaa ggatgtggcc
     6361 atctccgtgt caggccagca ggtgatggtc aaaaaagtga catttccttt gatgagccag
     6421 gccgaactgg ctgaatccgt ccgctgggaa gccgaaagct tcttccccgc cggacagggt
     6481 ctggactcct atgccctgga ttactacctc atcgaggagc gggcggtcga cggcaacatg
     6541 gatgtggtgc tggtggcctg ccgcaaggac aagctcgaag cctacgtgag ctgcgtcgcc
     6601 caggccgggt gcagccccaa ggtcgtggat gtcgatgtgt ttgccgtcca gaatgcctac
     6661 gaggccaaca ccgtgggtgg tggccgggat gaagtcgtcg ccctggtgaa catgggcgcc
     6721 accttcacca acctcaccat gatggtgggc ggcaagtcgg tgttctggcg cgacatggcc
     6781 tgggggagtg gccgctattc cgaaaaactc atggaggact ggggtgtgac ccgggaaggg
     6841 gccgaacggc tgaagcggaa tcagcctgcc gagggccaca accccgagga aatccatcct
     6901 tcgatcaatg ctgtgtccga tgcctttgcc gacgaactca gccgcaccct cgatttcttc
     6961 aaaagcagct tcaaggtgga ccgccttgat cgtgtgctgg tcagcggcgg cgggtccatg
     7021 acccacgggc tgatggacgt gctgagcgac cggctgcggg tatcggtgga ccggttcaat
//
LOCUS       DASUDT010000014         3486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1215997, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000014 DASUDT010000000
VERSION     DASUDT010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3486
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215997"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VFV26_00315"
     CDS             complement(<1..457)
                     /locus_tag="VFV26_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4844627.1"
                     /translation="MRARVVALANQKGGVGKTTTAINLAASLAMMEKMVLLLDFDPQG
                     HSTTGLGFPKPDHRAGAYALMKGAPAEALVLSTEVPMMQVIPAGKDLAQMEFELFELP
                     QLQVLRQALAPLMDRYDYILIDPPPSLGMITLNALTAADEVIVPMPCEFF"
     gene            complement(573..1133)
                     /locus_tag="VFV26_00320"
     CDS             complement(573..1133)
                     /locus_tag="VFV26_00320"
                     /inference="COORDINATES: protein motif:HMM:NF013813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844628.1"
                     /translation="MAIPGAPEEALVEAISSGERILLRRDDRGVGIRMPEGERFGLRP
                     VPMATDLPAGFGWIGNPQLVLRVPSVAAVDLPVFAPPLRHHPAIPGGTNVNVIEVIAP
                     GEARIRSWERGVEGETLCCGTGCAVAAAWLARTEGLSAWHFHTAGGEDVSVELILDAG
                     GAWRDLWLSGPVRRLGRVHPDPSLWA"
     gene            complement(1366..1668)
                     /locus_tag="VFV26_00325"
     CDS             complement(1366..1668)
                     /locus_tag="VFV26_00325"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEX4844629.1"
                     /translation="MNANWLLKSSTLWGALGFSLFFSLMAMLFSEGGLPGLRKREAEL
                     AAARVRLLELNRRNRELLEEVQRLAAKDPELMEALARRQGYARPGETVYTFGNREK"
     gene            complement(1681..2961)
                     /gene="eno"
                     /locus_tag="VFV26_00330"
     CDS             complement(1681..2961)
                     /gene="eno"
                     /locus_tag="VFV26_00330"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX4844630.1"
                     /translation="MNIIDRVSALEVLDSRGNPTVLARVQLSDGTVGQAIVPSGASTG
                     SREALERRDGDKKRYLGKGVLGAIDAINVELAEALQGMDPFQQAELDELMCDLDGTEN
                     KGRLGANAILGVSMALADAAARASRMPLYRYLGGASTRLLPVPMMNILNGGAHADNNV
                     DIQEFMVLPVGAPSFREAVRWGAEVYHALKGVLKARKLATGVGDEGGFAPNLGSNEEA
                     LELIGEAVKKAGYKLGKDLFLGLDCAASEFHNGKAYTLDGASKTAAQLVQYYEGLVAR
                     HPVISIEDGFAEGDWKGWKAQTVAMGAKTQLVGDDLFVTNPAILAKGIQEGVANAILI
                     KLNQIGTVTETLAAVDMAHKAGYRAVISHRSGETEDSFIADLAVATGAGQIKTGAPCR
                     TDRVAKYNRLLQIEWELGASARYAGREAFGTRIG"
     gene            complement(3044..>3486)
                     /locus_tag="VFV26_00335"
     CDS             complement(3044..>3486)
                     /locus_tag="VFV26_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844631.1"
                     /translation="QILAGVEPPKKAAKPKGKTGSAADAAHPPAAVAAAKERISTQRK
                     DTAQPGTKGATAKPSSRTTPSNPAQKGVKEPPMAELTNMVATPAAPAAAKPAAKKPAK
                     KAAPKKAAAKKPAAKKAAPKKAAAKKPAAKKVVKKAAPKKAAKK"
BASE COUNT          541 a         1185 c         1149 g          611 t
ORIGIN      
        1 cgaagaactc gcagggcatg gggacgataa cctcatccgc ggccgtgagg gcgttcaggg
       61 tgatcattcc gaggctcggg ggcggatcga tgaggatgta gtcgtagcgg tccatgagcg
      121 gcgccagggc ctgcctcagc acctggagct gcggcagctc gaagagctcg aattccatct
      181 gcgccaggtc cttgcccgcg gggatcacct gcatcatggg cacttccgtg ctgagcacca
      241 gggcctcggc aggcgcgccc ttcatcagag cgtaggctcc ggcgcgatga tccggtttgg
      301 ggaagcccag gcccgtggtg ctatggccct ggggatcgaa atccaggagc agcaccatct
      361 tttccatcat ggcgagggac gcggccagat tgatggccgt ggtggtcttc cccacgccgc
      421 ccttctggtt cgccaatgcc actacccggg cgcgcatcag gcggccctca tcatcgcgca
      481 ggcggtattc aaaccacgca tcttggcatc ccctcgggtg tggaacagga cagtctagca
      541 ggtcgggttc cacggcgaag cggccctgtt gttcaggccc agagcgaggg atccggatgc
      601 acccggccca ggcggcgcac cgggccggaa agccacaagt cgcgccaggc cccaccggca
      661 tccaggatca gttcgaccga aacgtcttcg ccgccagcgg tatggaaatg ccaggcagaa
      721 aggccttcgg tccgggccag ccaggccgcg gccacggcac atcccgtccc gcagcaaagg
      781 gtctcgccct cgacgccacg ctcccaggag cggatcctcg cctcccccgg cgcgatgacc
      841 tcgatcacgt tcacattcgt gccgcccggg atcgccgggt ggtggcggag cggcggggcg
      901 aagacgggca ggtccaccgc cgccacggag ggcacgcgca gcaccagctg cggattgccg
      961 atccacccga acccagcggg caggtctgtg gccatgggca ccgggcgcaa accgaaccgc
     1021 tctccctcgg gcatccggat gcccacgccg cgatcatccc ggcgaagcag aatgcgttcg
     1081 ccactggaga tggcctcgac gagggcttct tccggggccc ccgggatagc catggccgcc
     1141 ctgcttccgt tggaacaaaa ggacttggat ccatccgtgt cccagtgctc caggacccat
     1201 ggccccttcc cgggcctttg catcaaaaaa aggccatcta aaccaaagcc gcggccccgg
     1261 gggcaaagga ttttggcgta atccgatcca agacaacctt tagcatcctc tggccaaagg
     1321 tagccgaaca cgttgccggc cgcagaagca agaaagggtt ccaacctact tctcgcggtt
     1381 gccgaaggtg tagaccgtct cgccgggccg cgcatagccc tgccggcggg ccagggcctc
     1441 catcagctcg gggtccttcg cagcaaggcg ctggacctcc tccagcagtt cccggttgcg
     1501 ccggttaagc tccagcagcc gcacccgggc cgcagccaac tcggcctcgc gcttccgcaa
     1561 ccccggcagg ccgccctctg aaaagagcat ggccatgagc gagaagaaga gcgagaaccc
     1621 cagcgccccc cagagggtcg acgacttcag aagccagttg gcattcatgg agggatcccc
     1681 ctagccgatg cgagttccga aagcctctcg gcccgcgtac cgggcggagg cccctagttc
     1741 ccattcgatc tggagcaggc ggttgtactt ggccacccgg tccgtgcggc agggggcgcc
     1801 cgtcttgatc tgcccggcgc ccgtggccac ggccaggtcg gcgatgaagc tgtcctcggt
     1861 ctcgccgctg cggtggctga tgacggcccg gtagccggcc ttgtgggcca tgtccacggc
     1921 cgccagggtc tccgtgacgg tgccgatctg gttcagcttg atgaggatgg cgttggccac
     1981 gccctcctgg atgcccttgg ccaggatggc gggattggtc acgaagaggt cgtcacccac
     2041 cagctgggtc ttggccccca tggccaccgt ctgggccttc cagcccttcc agtcgccctc
     2101 cgcaaagccg tcctcgatgg agatgaccgg gtgccgggcg accaggccct cgtagtactg
     2161 caccagctgg gccgcggtct tgctggcgcc atccagggtg taggccttgc cgttatggaa
     2221 ttcactggcg gcgcagtcca ggcccaggaa gaggtccttc ccgagcttgt agcccgcctt
     2281 cttgaccgct tccccgatca gttcgagggc ttcttcgttg gaacccaggt tcggggcgaa
     2341 tccgccttca tcccccacgc cggtggccag cttgcgggcc ttcaggacac ccttcagggc
     2401 gtggtagacc tcggcccccc accggacggc ctcccggaag ctgggcgccc ccacaggcag
     2461 caccatgaac tcctggatgt ccacgttgtt gtcggcgtgg gccccgccgt tgaggatgtt
     2521 catcatgggc acgggcagga gccgggtcga ggctcccccc aggtagcggt agaggggcat
     2581 ccgggaagcc cgggccgcgg catccgccag ggccatggac acgcccagga tggcattcgc
     2641 acccaggcgc cccttgttct cggtcccgtc cagatcgcac atcagctcgt cgagctcggc
     2701 ctgctggaag ggatccattc cctgcagggc ctcggccagc tcgacgttga tcgcgtcgat
     2761 ggccccgagc acacccttgc ccaggtagcg cttcttgtcg ccgtcccgcc gttccagggc
     2821 ctcgcgacta cccgtggagg cgcccgaagg gacgatggcc tggccgaccg tcccgtcgga
     2881 gagttgcacc cgcgccagca ccgtgggatt cccccggctg tcgagcactt caagggcgga
     2941 gacgcggtcg atgatgttca tgaagacacc cggctcagag aggcgcgcca gcgcgcctct
     3001 ctgatgttag ccaggttgtg cggggcgatt ccgcggaatc cacctacttc ttggcggcct
     3061 tcttcggcgc ggccttcttc acgaccttct tggcggccgg cttcttggcg gcggccttct
     3121 tcggcgcagc cttcttcgcg gcgggcttct tggcagcggc cttcttcggc gcggccttct
     3181 tcgccggctt cttggcggcg ggcttcgcgg ccgcaggggc ggcgggggtg gcgaccatgt
     3241 tggtcagttc ggccatgggt ggctccttta cgcccttttg ggcggggttg gaaggggtcg
     3301 tgcgggaaga tggcttggct gtagcaccct ttgtgccagg ctgagccgtg tctttccgct
     3361 gggtggatat gcgttccttg gctgcggcaa cagccgcggg gggatgcgcc gcatcggcgg
     3421 cagagccggt cttgcccttg ggcttcgcgg cttttttcgg gggctcaaca ccggccagga
     3481 tctgcg
//
LOCUS       DASUDT010000015         3138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1127576, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000015 DASUDT010000000
VERSION     DASUDT010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127576"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..934)
                     /locus_tag="VFV26_00340"
     CDS             complement(188..934)
                     /locus_tag="VFV26_00340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844632.1"
                     /translation="MTTPDLKALESLTRDYAAFQARKSGLATALGGFLALALFCVAVR
                     PEVFGVQLMQRPALEVMLFVPFIWLALKHLLARLLYRGLGTVKAAPDAGYERRLWFWL
                     LGLALFLMTCLIVAIYGFVSGALMAAKPMVGCLPPDHPLFHPWAWLIWMPLLYLAPVP
                     WTIRGIEEARAYAVLVGQCMLWLIPIFLFAFGAFPPVHPLPKVAYVLAPIGILGLVLG
                     ITVWSALAMVRGWKEHREYLAILRALPRES"
     gene            complement(931..1206)
                     /locus_tag="VFV26_00345"
     CDS             complement(931..1206)
                     /locus_tag="VFV26_00345"
                     /inference="COORDINATES: protein motif:HMM:NF024988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX4844633.1"
                     /translation="MVHEPARLAILTVLASAEEVAFLFLQRVTGMSKGNLSSHTQKLE
                     AAGYLETVKAFQGRIPVTSFRITEDGRTALRTYHQQLRALLPKEGKP"
     gene            1321..2349
                     /locus_tag="VFV26_00350"
     CDS             1321..2349
                     /locus_tag="VFV26_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntG family PLP-dependent aldolase"
                     /protein_id="HEX4844634.1"
                     /translation="MRPIDLRSDTVTQPSKEMRAAMAAAEVGDDVLEHDPTMARLEGR
                     VAELLGMEAALWVPAGCMGNLIALMLHLKRGDRFLAPAQAHVLGAELGTGAWLAGGMP
                     EALAWEGGPGRPTPAQVTKAAGSPGPYYTLTTTLLCLENTHNFAGGAVTPQAEHHALV
                     AAAKAAKLAVHLDGARLWHAAAALDLPPSALTEGVDTVQVCLSKGLGAPMGSLVCGTR
                     PAIVEARRLRKMLGGGVRQGGVVAAAGLAALDYLPRLPEDHAKARRLAEGLRGFGITA
                     PAPETNILLIPVPDSGAAAAALEKAGVRVSVVGPAVRFIPHRDLEMADMEEALRRMEP
                     LAHLLRTA"
     gene            2351..>3138
                     /locus_tag="VFV26_00355"
     CDS             2351..>3138
                     /locus_tag="VFV26_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844635.1"
                     /translation="MKARLALLTLALLVLGGAGYWWYQDTLVPVPLASSEGLFVPAKP
                     EFGEDQAVVEALMPAGAGVDAFLTSQSDLALLEKTAGGVWIGQLLSSLEGSRHGRRWR
                     LGVPPGWRMQDGSTLDAARMAKALTPEIGRLEGTSRVIDGATVELRFKARQENLPAQL
                     ARWRIPGSGPFRRQGLTLTRFEGFTPGRPGLAGVRITTDPALLESRAWAQGLAAGRWA
                     WTVFPGQVAPEDMAKVRIAPYDEYRLKDGSVWFLSRRMRRLRPDP"
BASE COUNT          500 a         1055 c         1131 g          452 t
ORIGIN      
        1 ccacatggag gagcacgtcg aaggccaggg gcatgggccg cccgccgaac atcagatgtt
       61 ccgtgagggt gaggtgcgcc gtggaggaga ccggcaggaa ttccgtcagg ccctggacca
      121 ggcccaggag gatggcgtgc agcaggttca ttcgtactcc ggccaaaaag acagtgtgcc
      181 agagggctca ggattcccgg ggaagcgccc gcaggatggc caggtactcg cggtgttcct
      241 tccagccccg gaccatggcc agggcggacc agaccgtgat gccgagcacc aggccgagga
      301 tgccgatggg ggcgagcacg taggcgacct tcggaagcgg gtgaacggga gggaaggcgc
      361 cgaaggcgaa caggaagatg gggatcagcc agagcatgca ttgtcccacc agcacggcgt
      421 aggcccgcgc ctcctcgatc ccccggatgg tccaggggac aggggcgagg tagaggagcg
      481 gcatccagat gagccatgcc cagggatgga acagcgggtg atcggggggg aggcagccga
      541 ccatcggctt ggcggccatg agggcgccgg agacgaaccc gtagatggct acgatgaggc
      601 aggtcatgag gaacagggcc aggcccagga gccagaacca gagccgccgc tcataacccg
      661 catccggggc ggccttcacg gttcccagcc cgcgatagag caggcgggcc agcagatgct
      721 tgagcgccag ccagatgaag ggtacgaaca gcatgacttc cagcgccggg cgctgcatca
      781 actgcacgcc gaacacctcc gggcgcaccg cgacacagaa caacgcgagg gccaggaatc
      841 cacccagggc cgtggccagg ccgctcttgc gggcctggaa agccgcatag tcccgggtca
      901 gcgattcgag ggccttcagg tccggcgtgg tcatggcttt ccttccttcg ggagcagggc
      961 ccggagttgc tggtggtagg tgcggagggc ggtgcggccg tcctcggtga tgcggaagct
     1021 ggtgacgggg atgcggccct ggaaggcctt cacggtctcc aggtaacccg cagcctccag
     1081 cttttgcgtg tggcttgaga ggttgccttt gctcatgccc gtgacccgct ggaggaagag
     1141 aaaggccacc tcctccgccg aggccagcac cgtgaggatg gccaggcggg ccggttcgtg
     1201 gaccatccga tcgagatcca ggatggcttt ggggctgggt tcgtttttgg ccatgaaaca
     1261 agtttgcaac acaaactagt ttcgtcaacc gaaaatcggc acccgtgatt gaatctcccc
     1321 atgcgaccca tcgacctccg ttccgacacc gtgacccagc cctcgaagga gatgcgcgcc
     1381 gccatggccg ccgcggaggt gggggacgac gtgctggagc acgatcccac catggcgcgc
     1441 ctggagggcc gggtggcgga gctgctgggc atggaggcgg ccctgtgggt gcccgcgggc
     1501 tgcatgggca acctcatcgc cctgatgctg cacctcaagc gcggcgaccg cttcctggcg
     1561 ccggcccagg cccatgtgct gggggccgaa ctgggcacgg gggcctggct ggcgggcggc
     1621 atgcccgaag ccctggcctg ggaaggcggc ccgggccgtc ccaccccggc ccaggtgacg
     1681 aaggctgccg gttcgcccgg tccctactac accctgacca ccacgctgct ctgcctggag
     1741 aacacccaca acttcgccgg gggggcggtg acgccgcagg ccgagcacca cgccctggtg
     1801 gccgccgcca aggccgcgaa gctggcggtg cacctggatg gcgcccggct ctggcatgcc
     1861 gccgccgccc tggacctccc gccctcggcc ctgacggaag gtgtggacac cgtgcaggtc
     1921 tgcctcagca agggcctggg cgcgcccatg ggttcgctgg tgtgcgggac gcggcccgcc
     1981 atcgtcgagg cccggcgcct gcgcaagatg ctggggggcg gcgtgcgcca gggcggcgtg
     2041 gtggccgcgg cgggcctggc ggccctggac tacctgccgc gccttccgga agaccacgcc
     2101 aaggcccggc gcctagccga gggcctgcgt ggcttcggca tcaccgcccc cgcgcccgag
     2161 acgaacattc tgctgattcc cgtgccggat tccggcgccg cggcggcggc tctggagaaa
     2221 gcgggcgtgc gggtctccgt ggtgggcccg gcggtgcgct ttattcccca ccgcgacctg
     2281 gagatggcgg atatggaaga ggccctgcgc cgcatggaac ccctggccca tctgctgcgg
     2341 accgcctgac atgaaggccc gcctcgccct cctgaccctg gcgctgctcg tcctcggggg
     2401 cgccgggtat tggtggtacc aggacacgct ggtgccggta cccctggcct ccagcgaagg
     2461 cctcttcgtc cccgccaagc ccgagttcgg ggaggaccag gcggtggtgg aggcgctcat
     2521 gcccgcgggt gctggcgttg acgccttcct cacgtctcag tccgaccttg ccctcctgga
     2581 aaaaacggcc gggggcgttt ggatcggaca gttgctgtcg agtcttgagg gctcccggca
     2641 cggccgccgc tggcgccttg gcgtacctcc cggctggcgg atgcaggacg ggtccacgct
     2701 cgatgccgcg cggatggcga aggccctcac acccgagatt gggaggctgg agggaacctc
     2761 ccgggtgatc gacggggcca ccgtcgaact gcggttcaag gcccgccagg agaacctgcc
     2821 cgcccaactc gcccgctggc ggatccccgg cagcgggccc ttccggcggc aggggctgac
     2881 cctcacccgg ttcgaaggct tcaccccggg gcgcccgggc ctggccggcg tgcgcatcac
     2941 cacggacccg gctctgctgg aaagccgcgc ctgggcccaa ggcttggccg cgggccgctg
     3001 ggcctggacc gtgttccccg gccaggtcgc tcccgaagac atggccaagg tccgcatcgc
     3061 cccctacgac gagtaccgcc tgaaggacgg ttccgtgtgg ttcctctccc gccgcatgcg
     3121 gcgtctcaga ccggaccc
//
LOCUS       DASUDT010000016         9645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1326391, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000016 DASUDT010000000
VERSION     DASUDT010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9645
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1326391"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VFV26_00360"
     CDS             complement(<1..511)
                     /locus_tag="VFV26_00360"
                     /inference="COORDINATES: protein motif:HMM:NF021520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1858 domain-containing protein"
                     /protein_id="HEX4844636.1"
                     /translation="MIITPETKIGDFLEAHPDLQEALIARVPEFAKLRNPILRRTVAK
                     LATVDQAARIAGMPTGELVRFLRELAGETVAATDAAVSDSIEGPRPSWAVSGSVRTTL
                     DADALLAAGEHPLARTRRALLTLAPGEAMQLLSPFRPEPLLDQFRQEGFPCWCEAETP
                     GHFRTWILKP"
     gene            complement(519..1757)
                     /locus_tag="VFV26_00365"
     CDS             complement(519..1757)
                     /locus_tag="VFV26_00365"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF438 domain-containing protein"
                     /protein_id="HEX4844637.1"
                     /translation="MSELINNRDHRIATLKEIILHLHRGEAPEQVKARLAHLVGQVDA
                     TEIAAMEQSLMADGMSPQEVKSMCDLHAEVLQDTVAPAKALDLPAGHPVDTFRRENRA
                     LEGAIATAREHVAALETVADQAYPTDERLAVLGAFNALMDVDKHYQRKEHLVFSVLER
                     HGNTGPSKVMWAKDDEVRDFLKGAIEVLREESLSGAELKLLVPTVLRPALAALESMIY
                     KEETILLPMCLGLFTEEEWGEIWQDSPRYGWCLVEPATGYAPPEPAFPKDTLQLPAAS
                     AVAFPSGVLSFQQLIGIFSSLPVDITFVDADDRVAFFSEGPDRVFARSRTILGREVKH
                     CHPPKSVDVVERILEDFKTGRQSVAEFWIQMHGKFVHIRYFAVRDEAGAYLGTLEVTQ
                     DLTRLRALEGDRRLLQYDEA"
     gene            1899..2996
                     /locus_tag="VFV26_00370"
     CDS             1899..2996
                     /locus_tag="VFV26_00370"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002528.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase family protein"
                     /protein_id="HEX4844638.1"
                     /translation="MSDKLSVGLLFGGESPEHEVSIVTARAIAEHLDPARFTVRPMGI
                     ARNGVWAVTGDPFARLAAGELPQRSAHPFLPLEKGAETAPLPDLFFNALHGAGGEDGQ
                     IQGYLELLHRPYTGAGLLAMAAGMDKWITKRLWESEGLPVVPYVGLTEERWIRQRPAC
                     LAECAKLGLPLFVKPANLGSSIGVEKVKRAEDLAAALDRAFTFDRRVLVEQGLDVREI
                     EVAVLGGDEPLVSKPGEVIVADEFYTFEDKYLHGKSRTEIPADIPEELADLVRKLAAK
                     AFATSDGYGMARVDFFLERLSGRVFLNELNFIPGFTSISMYPKMMAASGVPYAELLTR
                     LIDLALARHAQTAAKQKGFQSGSDWFRKAQG"
     gene            3022..3339
                     /locus_tag="VFV26_00375"
     CDS             3022..3339
                     /locus_tag="VFV26_00375"
                     /inference="COORDINATES: protein motif:HMM:NF018168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod C-terminal
                     domain-containing protein"
                     /protein_id="HEX4844639.1"
                     /translation="MDGFGIALSGLRAASAGLAVQANNVANQRSDGYRAKRLDLVAQA
                     EGGVLVQGLSVDPAPAVPGGSNVDLASETVQGMGFDVMYKANLKVLKAEDERLKATLD
                     LKA"
     gene            3397..4533
                     /locus_tag="VFV26_00380"
     CDS             3397..4533
                     /locus_tag="VFV26_00380"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX4844640.1"
                     /translation="MLSLPLVAAFTLPVLRQGAQPAQPKPGVKAAPQDPLAGLSDIQD
                     VLSLVQQNYVDAPDMDKVVAGGVQAVLERSHPLNAYLTAEDLRLPDPGPAEAGLVVLK
                     RGIYATVLAVTPGGPGAKAGIQAGDVIRKVDGDSVGRLSAWALERRLRGAEGSTLDLY
                     RYNATGDLTKTTLQRQRPAKAVITLKQGAHALMVSLPDLAPGRAEELKKLLAAQDHGL
                     TLVLDLRQCSKGSMEEAAAVAGLLGATGTLGTLQEAGKPDRPVPVTGSGTPFTRSALL
                     VGRSSLGPSEVLAASLKKGGAKVFGEKTPGLGVERSRFPLKQGGAVELVSRRWLGAGG
                     EKLDRQGLAPDQILRLSEADDALAKVLAALQAPAPAAPAPAKAS"
     gene            4535..5449
                     /locus_tag="VFV26_00385"
     CDS             4535..5449
                     /locus_tag="VFV26_00385"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEX4844641.1"
                     /translation="MARGKGKRTSTLALVGWAVLMLALGLGAGLVLGQQGCGRREAPA
                     KREAPAPDPKKPEKKSAEPKAKPSSEAVRPQSPEPIRPLPRLALVIDDLGYVQPELVT
                     RLCSLPVPFSVAVLPYQEFTRDSAEIAHRLGKEVMLHLPMEPLGFPGPGRDPGPNAIL
                     YNLSETEVRRRVRMAMDEIPHRKGVNNHMGSRITPDRTRMGWVLQEVKTRKFFFVDSR
                     TEKDSVAYSVAEQLGIPAVERRVFLDDDKAFPEMEKQWERALKLAEKDGSVLIIGHIY
                     PETVEALEKLVPRSKAQVRFVKAGDLAR"
     gene            5473..5859
                     /gene="crcB"
                     /locus_tag="VFV26_00390"
     CDS             5473..5859
                     /gene="crcB"
                     /locus_tag="VFV26_00390"
                     /inference="COORDINATES: protein motif:HMM:NF010792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX4844642.1"
                     /translation="MGFYSFLAVGVGAALGAWLRWGLGALLNPMLTPLPLGTLAANLL
                     GGYLVGVAVAVFAQHPGLAPEARLLIITGFLGGLTTFSTFSAEAMHLLTRGEYAWAAA
                     HVAAHLAGSLGMTLLGLLTVRALMKA"
     gene            5880..6209
                     /locus_tag="VFV26_00395"
     CDS             5880..6209
                     /locus_tag="VFV26_00395"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HEX4844643.1"
                     /translation="MKGTYLIFYVQEDRTRHGLLVYEWLLKTARNLGLKGGTAFKAVA
                     GFGRHGLIHADHFIELAGDLPVEVTFMATEEEAERLLAFIEREGQSMFYVRMPAECGF
                     LNEQVRS"
     gene            complement(6210..6824)
                     /locus_tag="VFV26_00400"
     CDS             complement(6210..6824)
                     /locus_tag="VFV26_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX4844644.1"
                     /translation="MDWRRRALWLAGLTIAYNLIEGLVSMAFGWADESVALFGFGADS
                     FIEVASAAIVLWKLLDHGSLERERKATRTIGWLFLGLGAGVAAGALFQLAAREHPPTT
                     VPGLVISALSLSFMVFLWRAKLRAAKALDSATVEADAACSRACIQLSAVLFAGSLAFL
                     LAPALWWVDAAAALALALLIAREGRGMVKAARSERFTGGCGCGH"
     gene            complement(6836..7276)
                     /locus_tag="VFV26_00405"
     CDS             complement(6836..7276)
                     /locus_tag="VFV26_00405"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4844645.1"
                     /translation="MAHPALLPVVLTCNTDLRFIDLIQVVGAEFLKHLSFSQEDGERL
                     WLAIQEGIANAMRHGNKLDRDKPVKVTFTPKVDRFEIRIEDRGKGVDLEALPDPNLPE
                     NLLKPGGRGVFFMRQVMDEVHMERRPEGSTLVLVKARKIREPHP"
     gene            7473..>9645
                     /locus_tag="VFV26_00410"
     CDS             7473..>9645
                     /locus_tag="VFV26_00410"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEX4844646.1"
                     /translation="MTEVPMKARWWLVLLVLLAGFGVLGLGGRQIAQNAPPIPQHVVA
                     EDGTQLVGPGQILEGQVSYLGHGGQHIGSIWGHGAYLAPDWSAKALHQWAAHTLDGVK
                     AQGASIADAKASTIAIFQNNKYESSTGTLTLNAAQAAAYLKTRAELAKIAVEGDQGAA
                     IPARWIPTMQEAERVADFWLWTAWSAAARRPGMDHSYTQNWPQEPLVGNSITPISHLW
                     SILSIILLILGVGLMVWHHASQPAEEFPDPKPIPPAPATPSQRWSAIYFAVAMALFLV
                     QIGMGVMTAHDAVEGNALDGLDLSRILPYAASRTWHLQLAVFWIATCWLATGLYLGPK
                     LSGKEPKGQWLGVAGLLVALVVVVVGALAGSHQAILGKLSGSFLLGHQGYEYVELGRL
                     WQILLTVGMIGWLVLVVRALIPALKGEAGRLGLLKLFVLSAVAIPLFYSAGFMYTRET
                     HIAMAEYWRWWVVHLWVEGFFEVFATVAIALLSTRMGLLREGTALRAVSLSMGLFLGS
                     GVIGTFHHLYYTGSPASIAALGSVFSALEIVPLTIVGFEIAMSLKAGRALGSGYEWPF
                     KYFAAVCFWNLLGAGVFGMLINPPSVLYFGQGLNTTPIHSHAALFGVYGFLAISLMLF
                     ALRGMTPDKAWDEKWLKYGFWGLNLGLVLMLALSLIPSGFYQIAQSLEHGTWYARSAE
                     VVQGPLMRTFTWLRMPGDVLFGLGALAVIVFTFKAVIGAWTW"
BASE COUNT         1463 a         3328 c         3320 g         1534 t
ORIGIN      
        1 agggcttgag gatccaggtc cggaagtggc ccggggtctc cgcttcgcac cagcagggga
       61 acccctcctg ccggaactgg tccagcaggg gctcggggcg gaaggggctc agcagctgca
      121 tggcctcgcc gggagccaac gtcagcagcg cccggcgggt gcgggccagg ggatgctcgc
      181 cggccgccag cagcgcatcg gcatccaggg tggtccgcac gcttccggaa accgcccagg
      241 agggccgagg accttcgatg gagtcagaga ctgccgcgtc tgtggcggcc acggtctcgc
      301 cggccagctc ccggaggaag cgcaccagct ctcctgtggg catgcccgcg atgcgggccg
      361 cctgatccac ggtggccagc ttcgccaccg tgcgccgcag gatggggttg cgcagcttgg
      421 caaactcggg gacccgggcg atgagggctt cctgcaggtc cgggtgggcc tccaggaagt
      481 cgccgatctt cgtttcgggc gtgatgatca tgggggcctc aggcttcgtc gtactggagc
      541 aggcggcggt cgccttcgag agcgcggagg cgcgtgaggt cctgggtcac ttccagggtt
      601 cccaggtagg cgccggcctc gtcacgcacg gcgaagtagc ggatgtggac gaatttcccg
      661 tgcatctgga tccagaactc cgccacggac tggcggcccg tcttgaagtc ctccaggatg
      721 cgctccacca cgtccacgct cttgggcggg tggcagtgct tcacctcccg gcccaggatg
      781 gtgcggctgc gggcgaagac gcggtccggc ccctcgctga agaaggccac gcggtcgtcc
      841 gcgtccacga aggtgatgtc cacgggcagg ctggagaaga tgccgatgag ctgctggaag
      901 ctgaggacgc cgctggggaa ggccacggcc gaggcggcag gcagctggag ggtgtctttg
      961 gggaaggccg gctccggcgg ggcgtagccc gtggcgggct ccaccagaca ccagccgtag
     1021 cgcgggctgt cctgccagat ctcgccccac tcctcttcgg tgaagaggcc caggcacatg
     1081 ggcaggagga tggtctcctc cttgtagatc atggattcca gggccgccag ggccggacgc
     1141 agcaccgtgg ggaccaggag cttcagctcg gcgccgctga ggctctcctc ccgcagcacc
     1201 tcgatggcgc ccttgaggaa gtcgcgcacc tcgtcgtcct tggcccacat gaccttggag
     1261 ggtccggtgt tgccgtggcg ctccagcacc gagaacacca ggtgctcctt gcgctggtag
     1321 tgcttgtcca cgtccatgag ggcgttgaag gcccccagca cggccaggcg ctcatcggtg
     1381 gggtaggcct ggtccgccac ggtctccagg gcggcgacat gttcgcgggc cgttgcgatg
     1441 gccccttcca gggcccggtt ctcccggcgg aaggtgtcca cgggatggcc cgcgggcagg
     1501 tccagggcct tggccggggc cacggtgtcc tggagcacct ccgcgtggag gtcgcacatg
     1561 gacttcactt cctgggggct catgccgtcg gccatgagcg actgctccat ggcggcgatc
     1621 tccgtggcgt ccacctgacc caccaggtgg gccagccgcg ccttcacctg ctcgggggcc
     1681 tcgccccggt gcaggtgcag gatgatctcc ttgagggtgg cgatccggtg gtcccggttg
     1741 ttgatgagtt cgctcatggt gtctttccga ggggggccgt ccccggaatc atgaatatca
     1801 gataaaaatg atcaacaatt cttaaatgtg atttccgtcg caggctgggt ggttcgccgg
     1861 gcgggaacag ccccggatcc gggtgctaaa gtggggccat gagcgacaaa ctgagcgtcg
     1921 gccttctctt cggcggggaa tcccccgagc acgaagtctc catcgtcacg gcccgggcca
     1981 tcgcggagca cctggatccc gcccgcttca ccgtgcgccc catgggcatc gcccgcaacg
     2041 gcgtgtgggc ggtcacgggc gaccccttcg cgcggctggc ggccggcgag ctgccgcagc
     2101 gcagcgccca tcccttcctg cccctggaga agggcgccga aaccgcgccc ctgccggacc
     2161 tcttcttcaa tgccctgcac ggcgcggggg gcgaggacgg ccagatccag ggctacctgg
     2221 aactgctgca ccggccctac acgggcgcgg ggctgctggc catggccgcg ggcatggaca
     2281 agtggatcac caagcggttg tgggaatctg aaggcctgcc ggtggtgccc tacgtggggc
     2341 tcaccgaaga gcgctggatc cgccaacggc cggcctgcct ggcggaatgc gcgaagctgg
     2401 gcctgcccct cttcgtgaag cccgccaacc tgggcagcag catcggcgtg gagaaggtga
     2461 agcgggccga ggatctggcc gccgccctgg accgggcctt caccttcgac cgccgggtgc
     2521 tggtggagca ggggctggac gtgcgcgaga tcgaggtggc ggtgctgggc ggcgacgagc
     2581 ccctggtgtc gaagccgggc gaagtgatcg tggcggacga gttctacacc ttcgaggaca
     2641 agtacctcca cggcaagagc cgcacggaaa tccctgcgga catccccgag gagctggccg
     2701 acttggtgcg caagctggcg gcgaaggcct tcgccacctc ggacggctac ggcatggccc
     2761 gggtggactt cttcctggag cgcctcagcg gccgggtctt cctcaacgag ctgaacttca
     2821 tcccaggctt caccagcatc tccatgtatc ccaagatgat ggccgccagt ggcgtgccct
     2881 acgcggagct gctgacccgg ctcatcgacc tggccctggc ccgccacgcc cagaccgccg
     2941 ccaagcagaa gggtttccag tccggcagcg actggttccg gaaggctcaa ggctagggcc
     3001 gccccggccg atacccttcc catggacggc ttcggcatcg cactttccgg gcttcgcgcc
     3061 gccagcgcgg ggctggccgt gcaggccaac aatgtggcca accagcggtc ggacggctac
     3121 cgggccaagc ggctggacct ggtggcccaa gccgaaggcg gcgtccttgt gcagggtctg
     3181 tccgtggatc ctgctccggc cgtacccggc ggctcgaacg tggacctggc ctccgagacc
     3241 gtgcagggca tgggcttcga cgtgatgtac aaggccaacc tcaaggtcct gaaagccgag
     3301 gacgagcggc tgaaggccac cctcgatctg aaggcgtagc cgcgggatcg aagaagtctc
     3361 tacactgagg ccatgcatgc ccgtacctgg ctctcggtgt tgtccctccc tctggtggcc
     3421 gcgttcaccc tgccggtgct ccggcagggc gcccagccgg cccagcccaa acccggcgtg
     3481 aaggccgcgc cccaggatcc cctggcgggc ctctccgaca tccaggatgt gctgtccctg
     3541 gtgcagcaga actacgtgga tgccccggac atggacaagg tggtggccgg cggcgtccag
     3601 gccgtgctgg agcgctcgca tcccctgaac gcctacctga cggcggagga tctgcggctg
     3661 ccggatcccg gccccgccga ggccgggttg gtggtgctga agcgcggcat ctacgccacg
     3721 gtgctggcgg tgacgcccgg cgggcccggg gccaaggccg gcatccaggc gggcgacgtg
     3781 atccgcaagg tggacggcga ttccgtgggc cgcctcagcg cctgggccct ggagcgccgt
     3841 ctccgaggcg ccgaaggctc gacgctggac ctctaccggt acaacgccac cggcgacctc
     3901 accaagacca ccctgcagcg ccagcgcccg gcgaaggccg tcatcaccct caagcagggc
     3961 gcccacgccc tgatggtgtc cctgccggac ctggctcccg gccgggcgga ggagctgaag
     4021 aagctcctgg cggcccagga ccatggcctc accctggtcc tggacctgcg ccagtgctcg
     4081 aagggttcca tggaggaggc cgcagccgtg gcgggcctgc tgggcgccac gggcaccctc
     4141 ggcaccctcc aggaggccgg caagccggac cggcccgtgc cggtgaccgg atccgggacc
     4201 cccttcaccc gttcggcgct cctcgtgggc cggtccagcc tgggcccctc cgaggtcctg
     4261 gccgccagcc tgaagaaggg gggtgcgaag gtgttcggcg agaagactcc cggcctgggc
     4321 gtggagcgca gccgcttccc cctgaagcag ggcggggccg tggaactggt ctcccgccgc
     4381 tggctgggcg cgggcggcga gaagctggac cgccaggggc tggccccgga ccagatcctg
     4441 cgcctgtccg aggccgatga cgcgctggcc aaggtgctgg ccgccctgca ggcccccgcg
     4501 cccgccgcgc cggccccggc gaaggcctcc tagcttggcc cgaggcaagg gcaagcgcac
     4561 ctccaccctg gccctggtgg gctgggccgt cctcatgctg gccctgggcc tgggggcagg
     4621 gctcgtgctg gggcagcagg gctgcggcag gcgcgaggcg ccggccaagc gggaagcccc
     4681 cgctccggac cccaagaagc ccgaaaagaa atccgctgag ccgaaggcga agccatcctc
     4741 tgaggccgtc aggcctcaga gccccgagcc gatccgcccg ctgccccgcc tcgccctggt
     4801 catcgatgac ctcggctacg tgcagccgga gctggtgacg cgcctgtgca gcctgcccgt
     4861 gcccttcagc gtggcggtgc tgccctacca ggagttcacc cgcgacagcg ccgagatcgc
     4921 ccaccgcctg ggcaaggagg tcatgctgca cctgcccatg gagcccctcg gctttcccgg
     4981 gccgggccgc gaccccggcc ccaacgcgat cctctacaac ctgtccgaga ccgaggtccg
     5041 ccgccgggtg cggatggcca tggacgagat cccccaccgt aagggcgtga acaaccacat
     5101 gggcagccgc atcacgccgg atcgcacgcg catgggctgg gtgctgcagg aggtcaagac
     5161 ccggaagttc ttcttcgtgg acagccgcac cgaaaaggac agcgtggcct acagcgtggc
     5221 cgaacagctg ggcatccccg ccgtggagcg gcgcgtcttc ctggatgacg acaaggcctt
     5281 ccccgaaatg gagaagcagt gggagcgggc cctcaagctc gccgagaagg acggctcggt
     5341 gctcatcatc gggcacatct accccgagac cgtggaggcc ctggagaagc tggtgccccg
     5401 cagcaaagcg caggttcgct tcgtgaaggc gggtgacctg gcccgctgat aggctggatc
     5461 ggggatacag gcatggggtt ctattccttt ctcgcagtgg gcgtgggtgc ggccctgggt
     5521 gcctggctgc gctggggcct cggcgcgctc ctgaatccga tgctcacgcc gctgccgctg
     5581 ggaaccctgg cggcgaacct gctggggggc taccttgtgg gcgtggccgt ggctgtgttc
     5641 gcccagcatc ctggcctggc gcctgaagcc aggctcctca tcatcacggg cttcctgggc
     5701 gggctcacca ccttctccac cttttccgca gaggcgatgc acctgctcac ccgcggggag
     5761 tacgcctggg ccgcggccca tgtggccgcc cacctggcgg gttcgctggg catgaccctg
     5821 ctgggtctgc tgaccgtcag ggcgctcatg aaagcctgat cagccccaag gagggcgcca
     5881 tgaagggcac ctacctcatc ttctacgtgc aggaggaccg gacccggcac gggctcctgg
     5941 tctacgagtg gctgctgaaa acggcgcgca acctcggcct gaaaggcggc accgccttca
     6001 aggccgtcgc cggattcggc cgccacgggc tcatccacgc cgaccacttc atcgagctgg
     6061 cgggcgacct gccggtggaa gtgaccttca tggccaccga agaggaagcg gagcgcctcc
     6121 tggccttcat cgagcgcgag ggccagtcca tgttctacgt gcggatgccc gcggagtgcg
     6181 gcttcctcaa cgagcaggtc cgctcctgat cagtgcccgc acccgcagcc gccggtgaag
     6241 cgttcgctcc gcgcggcctt caccatgccc cggccttccc gggcgatgag gagggccagg
     6301 gctagggccg ccgccgcatc cacccaccac agggcgggcg ccagcaggaa ggccaggctt
     6361 ccggcgaaga gcaccgccga gagctggatg caggcgcggc tgcaggccgc gtcagcctcc
     6421 acggtggcgc tgtccagggc cttggcggcg cggagcttgg cgcgccacag gaacaccatg
     6481 aaggagaggg acagggccga gatcacaagg cccggcacgg tggtgggcgg gtgctcgcgg
     6541 gcggcgagct ggaacagcgc cccggcggcc acgcccgccc ccaggcccag gaacagccag
     6601 ccgatggtgc gggtggcctt gcgctcccgt tcgaggctgc cgtggtccag cagcttccag
     6661 agcacgatgg cggcggaggc cacctcgatg aagctgtcgg cgccgaagcc gaagagggcc
     6721 acggactcgt cggcccagcc gaaggccatg gagaccagcc cctcgatgag gttgtaggcg
     6781 atggtgagtc ccgccagcca gagggcccgg cggcgccagt ccacggcccc tcccatcacg
     6841 ggtgcggctc gcggatcttg cgggccttca cgagcacgag ggtggagccc tccggccggc
     6901 gctccatgtg cacctcgtcc atgacctgcc gcatgaagaa cacgccacgg ccgccgggct
     6961 tcaggaggtt ctcgggcagg ttcgggtcgg gcagggcctc caggtccacg cccttgccgc
     7021 ggtcctcgat gcggatctcg aagcggtcca ccttgggggt gaacgtcacc ttcacgggct
     7081 tgtcccggtc cagcttgttg ccgtggcgca tggcgttggc gatgccctcc tggatggcca
     7141 gccagagccg ctcgccatcc tcctggctga agctgaggtg cttcaggaat tccgcgccca
     7201 ccacctggat gaggtcgatg aagcgcaggt ccgtgttgca cgtgaggacg acgggcagga
     7261 gggcgggatg agccatagga cgaatattcc ctttcagaga tccggggagc caaggtcaag
     7321 gtacttggaa tcgagcccca ggggccagag gttttgccag ggcccgcatg acatccctat
     7381 cggaaggggg cgtgccggaa atcacaatta agaattaatg gtcctaaata tggagaattg
     7441 tggaacactg ctttccggcg cccagagcgg gcatgacgga ggttcccatg aaggcaagat
     7501 ggtggctggt gttgctggtg ctcctggcgg gcttcggcgt gctggggctg ggcgggcggc
     7561 agatcgccca gaatgcccct cccattccgc agcatgtggt cgccgaggat ggcacccagc
     7621 tggtgggtcc cggtcagatc ctcgaaggcc aggtcagcta cctgggccat ggcggacagc
     7681 acatcggatc catctggggc cacggggctt accttgcccc tgactggtcg gccaaggccc
     7741 tgcaccagtg ggctgcgcac accctcgacg gggtgaaggc ccagggcgcg tccatcgccg
     7801 atgccaaggc cagcaccatt gccatatttc agaataataa gtatgaatca tccacgggca
     7861 cgctgacgct gaatgccgcc caggctgccg cctatctgaa gacccgcgcc gaactggcga
     7921 agatcgcggt ggagggcgac cagggcgccg ccatcccggc ccgctggatc cccaccatgc
     7981 aggaagccga gcgcgtggcc gacttctggc tgtggacggc ctggtccgcc gcggcccgcc
     8041 gtcccggcat ggaccacagc tacacccaga actggcccca ggagcccctg gtgggcaaca
     8101 gcatcacgcc catcagccac ctctggagca tcctgtccat catcctgctg atcctgggcg
     8161 tggggctcat ggtctggcat cacgccagcc agcctgccga ggaattcccg gaccccaagc
     8221 ccattccgcc cgcgccggcg acccccagcc agcgctggtc cgccatctac ttcgccgtgg
     8281 ccatggccct gttcctggtg cagatcggca tgggcgtcat gacggcccat gacgcggtgg
     8341 aaggcaatgc cctcgacggt ctggatctct cccgcatcct gccctatgcc gcctcccgca
     8401 cctggcacct ccagctggcc gtcttctgga tcgccacctg ctggctggcc acgggcctct
     8461 acctgggccc caagctcagc ggcaaggagc ccaaggggca gtggctcggc gtggcgggcc
     8521 tgctcgtggc cctcgtggtg gtcgtggtcg gcgcgctggc cggcagccac caggccattc
     8581 tcggcaagct gtccggctcc ttcctgctgg gccaccaggg ctatgaatac gtcgagctgg
     8641 gccgcctctg gcagatcctg ctgaccgtgg gcatgatcgg ctggctggtg ctggtggtgc
     8701 gcgcgctgat ccccgccctg aagggcgagg ccggccgcct gggcctgctg aagctcttcg
     8761 tgctctccgc cgtcgccatc ccgctcttct actccgcggg cttcatgtac acccgtgaga
     8821 cccacatcgc catggccgaa tactggcgct ggtgggtggt ccacctctgg gtggagggct
     8881 tcttcgaggt cttcgccacc gtggccatcg cgctgctctc cacccgcatg ggcctgctgc
     8941 gcgagggcac cgcgctgcgc gccgtgagcc tctccatggg cctcttcctg ggcagcggcg
     9001 tcatcggcac cttccaccac ctctactaca cgggctcccc ggcctccatc gcggccctgg
     9061 gctccgtgtt cagcgccctc gagatcgtgc ccctcaccat cgtgggcttc gagatcgcca
     9121 tgagcctgaa ggcgggccgc gccctcggca gcggctacga gtggccgttc aagtacttcg
     9181 cggcggtctg cttctggaac ctgctgggcg ccggcgtctt cggcatgctc atcaacccgc
     9241 cctccgtgct ctacttcggc cagggcctca acaccacgcc catccacagc catgccgcgc
     9301 tcttcggggt ctacggcttc ctggcgatct ccctcatgct cttcgccctg cgcggcatga
     9361 cgccggacaa ggcctgggac gagaagtggc tgaagtacgg cttctggggc ctgaacctgg
     9421 gcctggtcct gatgctggcg ctgtcgctga tccccagcgg cttctaccag atcgcccaga
     9481 gcctcgagca cggcacctgg tatgcccgca gcgccgaagt ggtgcagggc ccgctcatgc
     9541 ggaccttcac ctggctgcgc atgcccggtg acgttctctt tggcctcggc gccctcgccg
     9601 tgatcgtctt caccttcaag gccgtcatcg gcgcctggac gtgga
//
LOCUS       DASUDT010000017         3667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1768291, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000017 DASUDT010000000
VERSION     DASUDT010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768291"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(277..1350)
                     /gene="rlmN"
                     /locus_tag="VFV26_00415"
     CDS             complement(277..1350)
                     /gene="rlmN"
                     /locus_tag="VFV26_00415"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0002935 - tRNA
                     (adenine(37)-C2)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0070040 - rRNA
                     (adenine(2503)-C2-)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX4844647.1"
                     /translation="MAAGCMPWDRPAPEREGLPSAWSLFPEDLAALGCPGSALETFKR
                     LHRPWTWKDGAPDLGPGIRRWLEGVADLGLPRLAERQPSSDGSTKLALELADGKRIEA
                     VHMPRKVRNPRVTYCISSQVGCAMGCTFCATGSMGILRNLQPGEILGQVVALMAALGP
                     DRGHELTLVFMGMGEPLHNLEHLHRAIRLMCHPAGLGLGKGRITVSTSGLVSGIEKLA
                     KLEPRPLLALSLNATTDEARSRTMPVNRVWNLARLRQALDDWGPARGEKFCFEYVLIA
                     GENDTEADAQRLADWLGDLRRGHNLNLIPMNEHAASAFREPGEDRVQQFAEWLKARGC
                     FVTVRRSRGRDVQGACGQLVKER"
     gene            complement(1350..2618)
                     /locus_tag="VFV26_00420"
     CDS             complement(1350..2618)
                     /locus_tag="VFV26_00420"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX4844648.1"
                     /translation="MPEPLRTLTPDGTEILIEQLPHVRSCAVGFWVRRGSRHEGALEE
                     GLAHFLEHTVFKGTASYPTPDELAAATDRLGGHVDAFTGKEVACFYGKVLSDQLPELV
                     HLLGELVTAPRFDAEELVRERNVILEEIAQSEDQPDDWVSELFYGGFWEGTPLAHPIL
                     GRRDQVAGYGPTEARAFFDHTYRAPNLVVAAAGAIEPGPFLDLLKPILDRLPKGTDHA
                     PDTLARTRPFLLNVPRKDLQQANLVMGFPAPGHHSSDRAAAHLLSHVLGGGMASRLFM
                     ELRERRGLCYQVGSYFSPYADTGALQISASCAPGQLRELVQRTMAECARIREAGVASD
                     ELDRAKLQARTGLVFSQESSSSRMFSLAHQAIHQGALQSLDQQMAEIEAVTAEDLLRV
                     ARELLDPAQLGLSALGTRRGSDIRPRDLVA"
     gene            complement(2693..3040)
                     /locus_tag="VFV26_00425"
     CDS             complement(2693..3040)
                     /locus_tag="VFV26_00425"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEX4844649.1"
                     /translation="MRDHTKLKAFHLADELALCIFRETGAFPVEERYGLARQIRRSAV
                     SVASNIVEGCARRTEADFLHFLDMAYGSSRKLEYQLSLASRLAYLPSESELPARAVEV
                     SKILNTLIRSLRD"
     gene            complement(3124..>3667)
                     /locus_tag="VFV26_00430"
     CDS             complement(3124..>3667)
                     /locus_tag="VFV26_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844650.1"
                     /translation="PAGIREDLEQRTLPLMLARPAPAWALPLGKGLPWFAWGALWLIL
                     GVLGLQVVGGDPALLPGRMMALVGAWWGELALMTLAGLLFKRGTLWGALYFFLWEPLV
                     RIFPPLLQRLTFTHHIESLAGSRAAQVKAHQLLAQEQVTTHPALALLALVAFGLLCWA
                     LAGWKLHRTPVGLAGSEAEG"
BASE COUNT          564 a         1250 c         1309 g          544 t
ORIGIN      
        1 ggattggctc ctgttctccc tgggcaccga ggtggtgtgg atcggcatcc ccgccctgct
       61 ggtgctcagc gtgcccaggg ccctccagtg gatcaggctg cgcagacgat cagaggaaac
      121 gccctgatac cagcgaacac tcgataagaa acaacgcttt caccaccaag acaccaagac
      181 accaagacac caagaaaaac aaaagcagtt cttggtgcct tggtgtcttg gtggtgatcc
      241 tttatctttt gaaggcgagt cgcacgatcc ggcggatcag cgctccttca ccagctgccc
      301 gcaggccccc tgcacgtcgc ggccccggct gcggcggacg gtgacgaagc agccccgggc
      361 cttgagccat tcggcgaact gctgcacgcg gtcctcgccg ggctcgcgga aggcgctggc
      421 ggcgtgctcg ttcatgggga tgaggttcag gttgtggccg cggcgcaggt cgcccagcca
      481 atccgccaga cgttgcgcgt cggcctcggt gtcgttctct ccggcgatga gcacgtactc
      541 gaagcagaat ttctcgccgc gcgccggacc ccagtcgtcc agggcctgac ggagccgcgc
      601 caggttccac acgcggttca cgggcatggt gcggcttctg gcctcgtccg tggtggcgtt
      661 gaggctgagg gccagcaggg gccggggctc gagcttcgcc agcttctcga tgccgctcac
      721 caggcccgag gtgctcacgg tgatgcggcc tttgccgagg cccaggcccg ccgggtggca
      781 catgaggcgg atggcgcggt gcaggtgctc caggttgtgc agcggctcgc ccatgcccat
      841 gaacaccagc gtcagctcgt gcccccggtc aggtcccagc gccgccatca gcgccaccac
      901 ctggcccagg atctcgccgg gctgcaggtt gcgcaggatg cccatgctgc ccgtggcgca
      961 gaaggtgcac cccatggcgc agcccacctg gctggagatg cagtaggtga cccggggatt
     1021 gcgcaccttg cggggcatgt ggacggcctc gatgcgcttg ccgtccgcca gttccagggc
     1081 cagcttggtg gagccgtccg atgagggctg ccgctcggcg aggcgcggca ggcccaggtc
     1141 cgccacaccc tccagccagc ggcggatgcc cgggcccagg tccggcgccc cgtccttcca
     1201 ggtccagggc cggtgcaggc gcttgaacgt ctccagggcg ctgcccggac agccgagcgc
     1261 cgccagatcc tccgggaaca gcgaccaggc cgaaggcagg ccctcccgct cgggggccgg
     1321 gcggtcccag ggcatgcagc cggcggccat caggccacca ggtcccgggg ccggatgtcg
     1381 ctgccgcggc gggtgcccag ggcgctgagg cccagctggg cgggatcaag cagctcccgg
     1441 gccacgcgga gcaggtcctc ggcggtgacg gcctcgatct ccgccatctg ctggtcgagg
     1501 ctctgcaacg cgccctggtg gatggcctgg tgggccaggc tgaacatgcg gctgctgctg
     1561 ctctcctggc tgaacacgag gccggtgcgg gcctggagct tggcccggtc cagctcgtcg
     1621 gacgccaccc ccgcctcgcg gatgcgggcg cactcggcca tggtccgctg caccagctcc
     1681 cgcagctggc ccggcgcgca gctggcgctg atctggaggg cgccagtatc tgcatagggg
     1741 ctgaagtagc tgcccacctg gtagcagagg ccccggcgct cgcgcagctc catgaagagg
     1801 cgcgaggcca tgccgccgcc cagcacgtgg ctcagcaggt gggccgcggc gcgatccgag
     1861 gagtggtgcc ccggcgcggg aaagcccatg acgaggttgg cctgctgcag gtccttgcgg
     1921 ggcacgttca gcaggaaggg ccgggtgcgg gccagggtgt cgggcgcgtg gtccgtgccc
     1981 ttgggcagcc ggtccaggat gggcttcagc aggtccagga agggccccgg ctcgatggcg
     2041 cccgcggcgg ccaccacgag gttgggcgcc cggtaggtgt ggtcgaagaa ggcgcgggcc
     2101 tccgtgggtc catagcccgc cacctggtcg cggcggccca ggatgggatg ggccaggggc
     2161 gtgccctccc agaagccgcc gtagaacagc tcgctcaccc agtcgtccgg ctggtcttcg
     2221 ctctgcgcga tctcttcgag gatgacgttg cgctcccgga ccagctcctc cgcatcgaag
     2281 cggggcgccg tcaccagctc gcccagcagg tgcaccagct ccggcagctg gtcggagagc
     2341 accttgccgt agaagcaggc cacctccttc ccggtgaagg catccacatg gccgcccagg
     2401 cggtccgtgg ccgcggccag ctcgtccggc gtgggatagg acgcggtgcc cttgaagacc
     2461 gtgtgctcca ggaagtgggc caggccctcc tccagcgccc cctcgtgccg cgacccccgc
     2521 cgcacccaga accccaccgc gcagctccgc acatggggca gctgttcgat gaggatctcg
     2581 gtgccgtcgg gggtgagggt gcggaggggt tcgggcatcc ttccagtcta ccgtccggca
     2641 agtcgggagt ccggagtctg gagtctggag tctggagctg ggcgccgcga aatcaatccc
     2701 ggaggctccg gataagggtg ttcagtatct tcgagacttc gaccgcccgt gccggcagct
     2761 cggactcact cggcaggtag gcgaggcgag aggccaagga cagctggtat tccagtttcc
     2821 gggatgagcc ataggccatg tcgaggaagt ggaggaaatc cgcttcggtc cgtcgggcgc
     2881 agccttcgac gatgttcgat gcgaccgata cagcggatcg ccggatctgc cgggcgaggc
     2941 catatctctc ctcaaccggg aacgcaccag tctcacggaa gatgcacaga gctagttcat
     3001 cggcgaggtg gaaggccttc agcttggtgt ggtcccgcat gacttccctc cacccgggcc
     3061 atgctgccca tccacatggg tcggcgcaac ctccagactc caggctccag actgcggacc
     3121 gagttacccc tccgcctcgc ttccggccag tcccacgggg gtccggtgca gcttccagcc
     3181 agccagggcc cagcagagga gtccgaaggc gaccagggcc agcagggcca gggccggatg
     3241 ggtggtcacc tgttcctggg ccagcagctg gtgggccttc acctgggcgg cgcggctgcc
     3301 ggcgaggctc tcgatgtggt gggtgaaggt gagccgctgg aggaggggcg ggaagatccg
     3361 caccaggggc tcccacagga agaagtagag ggcgccccag agggtgccgc gcttgaagag
     3421 cagacccgcc agggtcatga gggccagctc gccccaccag gcccccacca gcgccatcat
     3481 gcggcccggc agcagggcgg gatcgccgcc gaccacctgg aggcccagga ccccgaggat
     3541 gagccagagg gcgccccagg cgaaccaggg caggcccttg cccaggggca gcgcccacgc
     3601 gggcgcggga cgcgccagca tcaggggcag cgtgcgctgc tccaggtcct cgcggatgcc
     3661 cgcggga
//
LOCUS       DASUDT010000018         5657 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_487073, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000018 DASUDT010000000
VERSION     DASUDT010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5657
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487073"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..720
                     /locus_tag="VFV26_00435"
     CDS             <1..720
                     /locus_tag="VFV26_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX4844651.1"
                     /translation="VLDQDTGQTLLAKQAGAVVPIASLTKLMTAMVLLDAHLDPQEIL
                     TITNDDKDMLRHSKSRLPVGTRLPREQALLLALLASENRAAHALGRTFPGGLSAFVQA
                     MNAKARELGLEEARFEDPSGLSSGNVASARDLALLLEAAYRYPEIRDFSTRPATTIQA
                     GRRSIQFPNTNALVRSPRWTIGLSKTGYIQEAGRCLVMQAMLANRPVLIILLDSWGKY
                     SRLGDANRIKQWMETRLGSKG"
     gene            728..1393
                     /locus_tag="VFV26_00440"
     CDS             728..1393
                     /locus_tag="VFV26_00440"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HEX4844652.1"
                     /translation="MLVPDLQPPFPLAWGFSTRLDPPEDLPTRRLDQVHRCGIVEASE
                     AVIEGDGLWTTRPGVRIGVRVADCVPVLMAGPLAEGRPWAAALHAGWRGATGHGDPGP
                     GGGILRRGVARYRALGGHPADLVWAFGPAILACHFEVGGEVIAAARQDPAWHEGLCSE
                     GPSGKPHLDLHGFLRAQALDLGLDAAKDGSVALCTVCRPDLLYSYRRGETAGRQWGWV
                     EIR"
     gene            1448..1807
                     /locus_tag="VFV26_00445"
     CDS             1448..1807
                     /locus_tag="VFV26_00445"
                     /inference="COORDINATES: protein motif:HMM:NF015959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVG family protein"
                     /protein_id="HEX4844653.1"
                     /translation="MLNITDVRITKVEGDDKLRAFAALVLDDCFLVGDLRVVESEDGY
                     FVAMPSRRKRDGSFKDIAYPLNNTLREQIEEKVLLAYETATGHRALSRIERGEAVQVR
                     PDLLGVEEFGFTPKSNP"
     gene            1871..1945
                     /locus_tag="VFV26_00450"
     tRNA            1871..1945
                     /locus_tag="VFV26_00450"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1903..1905,aa:Gln,seq:ttg)
     gene            complement(2251..4152)
                     /locus_tag="VFV26_00455"
     CDS             complement(2251..4152)
                     /locus_tag="VFV26_00455"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4844654.1"
                     /translation="MGDLDHLNLPQTIGRYQVLRLLGSGAMGSVVLAEDPRIKRKVAI
                     KLMKLDAVKTEADKHEHLMRFQREAEVSGLLNHPGIVAIYDVGEEEGYGPFLAMEYVP
                     GKPLDGLMKDDAVLPNKEKLRIAAGVAEALDHAHAKGIVHRDVKPGNVMVGEDGRPKL
                     MDFGIAKREDASLTQTGTFLGTPSYASPEQIREGTVDSRSDIFSFGVLVFELMSGQSP
                     FPGTSINTILYRIVNEPPIEVQPPVLGMLPEGWRRVFGKVLAKRPEDRHATCTAFVRD
                     LLDAVVDLGKEDRRELLGLLRMNGDSPIPSIRSTSFDETMMVPPAPPRGGGRIWLSAA
                     VVALLAVGGWFLFRGPRGERLQIDSQPTGAKVFVNDLAVGTTPMNQPLQAGDALRLEL
                     KGHRPMAYTFKPGEAPPTFPLEPIVTEELIDSVPPGATVVLDEKPLEGVTPLTVRWNQ
                     GQSHRLTLTKDQLGYASDFGPGEVPRGRTFELKEATTAENRQEPPLDPNAPGALKLAG
                     AFSVRVKVDGKDMGELTPGAKLPLPPGTHKVDLASAKHYYKDTRNLSVAAGQTVSLNL
                     PALATLTVETFPGTGKVLIDGQDTGIESDGSSVKVAEGRHTITVRGAKGTKNETVEIK
                     GDKGLRFPL"
     gene            4281..>5657
                     /locus_tag="VFV26_00460"
     CDS             4281..>5657
                     /locus_tag="VFV26_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase family protein"
                     /protein_id="HEX4844655.1"
                     /translation="MDVVKTIVLGTYFTLLTILSIYGAHRLWMLLLYYRHKKDVPQPK
                     GDASYLPVVTVQLAVFNEMNVIERLMDHVVKMDWPKEKLEIQVLDDSTDETVKVASAV
                     VDRYKALGFDIHYLHRTDRTGFKAGALSEGLKVAKGELVAMFDADFLPTEDFLRKAVP
                     HFADTKVAFVQGCWAHLNREFSLLTQVQAILLDGHFVFEHTARHRSHAFFNFSGTAGM
                     WRVAAIADAGGWEHDTITEDADLSYRAQLKGWKGVYLKDLVVPAELPVEVNAFKSQQH
                     RWAKGNAQVIRKLMATIWKSNESLHTKLECWFHLTANCNYMLMVVLSVIMVPAMIFRA
                     GTPVHVLLLTDGPFFLLNAVSVGLYFGLSQKELTDNTGWAKRLKYIPGLMGLGIGLAL
                     NQAKAVLEGFFTDDKEFKRTPKYGVDASGKTVTKRAYKVPKSLMTFLELGFAIYYFGA
                     VLVAIYLRK"
BASE COUNT          903 a         1949 c         1849 g          956 t
ORIGIN      
        1 gtcctggacc aggacacggg ccagaccctg ctggccaagc aggccggagc ggtggtgccc
       61 atcgcctccc tcaccaagct catgacggcc atggtgctgc tggatgccca cctggatccc
      121 caggaaatcc tcaccatcac caatgacgac aaggacatgc ttcgccacag caagtcccgg
      181 ctccccgtgg gcacccgcct gccccgggag caggcgctcc tcctggccct gctggcttcg
      241 gagaaccgcg ccgcccacgc cctgggccgc accttccccg gcggtctttc cgccttcgtc
      301 caggccatga acgccaaggc cagggaactc ggcctggagg aggcccgctt cgaggatccc
      361 tccggccttt ccagcggcaa cgtcgcctcc gcccgggacc tggcgctcct gctcgaggcc
      421 gcctaccgct accccgaaat ccgtgatttc agcacccgcc ccgccaccac catccaggcc
      481 gggcgccgca gcatccagtt ccccaacacc aatgccctgg tgcgcagccc ccgctggacc
      541 atcggcctct ccaagaccgg ctacatccag gaagcgggcc gctgcctcgt catgcaggcc
      601 atgctggcga accgcccggt gctcatcatc ctcctggatt cctggggcaa gtattcccgc
      661 ctgggcgacg ccaaccgcat caagcagtgg atggaaaccc gcctgggatc aaagggctga
      721 gcctccggtg ctcgtcccgg acctccagcc cccctttcct ctggcctggg gcttctccac
      781 ccggctggac ccccccgaag acctgccaac ccggcgcctg gaccaggtcc accgctgcgg
      841 catcgtcgag gcctccgagg cggtcatcga aggagacggc ctctggacca ctcggcccgg
      901 cgtccgcatc ggcgtgcggg tggccgactg cgtacccgtg ctgatggcgg ggcccctcgc
      961 cgagggccgc ccctgggccg cggccctgca tgcgggctgg cggggcgcca ccggacatgg
     1021 tgatcccgga ccgggcggcg gcatcctccg gcggggcgtg gcccgctacc gcgccctggg
     1081 tgggcacccg gcggaccttg tgtgggcctt cggtcccgcc atcctggcct gccatttcga
     1141 agtgggtggc gaagtcatcg ccgccgcccg tcaggacccc gcctggcatg agggattgtg
     1201 cagcgaaggc ccatccggaa agccccacct cgacctgcac ggcttcctgc gggcccaggc
     1261 cctggatctc ggcctggacg cagccaagga cggcagcgtg gccctttgca ccgtctgccg
     1321 cccggatctg ctgtattcct accgccgcgg cgaaaccgcg ggacgccagt ggggatgggt
     1381 cgagatccgc taatctggag cctggccctc gctcctgagg cctgacgatt caagaccggg
     1441 gaatgccatg ctcaacatca ccgatgtccg catcaccaag gtggaaggcg acgacaagct
     1501 gcgggctttc gcggccctgg tcctcgacga ctgcttcctg gtgggcgacc tgcgcgtggt
     1561 ggaatccgag gacggctact tcgtggccat gcccagccgc cgcaagcggg acggcagctt
     1621 caaggacatc gcctatcccc tcaacaacac gctccgggag cagatcgagg agaaggtgct
     1681 gctcgcctac gaaaccgcca ccggccaccg ggccctcagc cgcattgaac gcggcgaggc
     1741 cgtgcaggtg cggcccgacc tgctgggcgt cgaggaattc ggcttcacgc cgaagagcaa
     1801 cccctgaggc ggccctgaag gccaggggct tgggcggcac gcgaacccgc gctatgcttg
     1861 gttttccgcc tggggagtag ccaagtggta aggcagcagg ttttgatcct gcgtaccgag
     1921 ggttcgaatc cttcctcccc aaccaaaagg gccgcttcgg gcggcccttt tggttgggga
     1981 gcgcctgaag gattcggatc agggatggcg cgcaggtagg gccagactgg aaccgtcctg
     2041 gggacggttc cagtcgatcc ggcgcagccg gaggcccgtg cgcagccagc cctgcggccg
     2101 gagcgtcacc cgcagggtga tgcggaggga atccttcctc cccaaccaat gctgtccggg
     2161 ggttccgcgc ttcgcgcata cccccgggcc cccgcgcacg gtcccggcaa agccgtgacc
     2221 gtgcttctcg gccgccacag ggcgggcgtt ctacaagggg aatcgcaagc ccttgtcgcc
     2281 cttgatctcc acggtttcgt tcttggtgcc cttggcgccc cggacggtga tggtgtggcg
     2341 gccctcggcg accttgacgc tgctgccatc gctttcgatg cccgtatcct ggccgtcgat
     2401 gaggacctta ccggtgccgg ggaaggtctc cacggtgagg gtggcgaggg caggcaggtt
     2461 cagggacacg gtctggcccg cggccacgct gaggttgcgc gtgtccttgt agtagtgctt
     2521 cgcgctcgcc aagtcgacct tgtgggtgcc gggaggcagg ggcagcttcg cacccggggt
     2581 gagctcaccc atgtccttgc cgtccacctt cacgcgcaca gagaaggcgc cagccagctt
     2641 gagggccccg ggggcgttgg gatccagggg gggctcctgc cggttttcgg cggtggtggc
     2701 ctccttcagt tcgaaggtcc ggccgcgggg gacttcgccg gggccaaagt ccgaggcgta
     2761 gcccagctgg tccttggtca gggtcaggcg gtgggactgg ccctggttcc agcgcaccgt
     2821 gaggggtgtc acgccctcca ggggcttctc gtccagcacc accgtggcgc cgggaggcac
     2881 ggaatcgatc agttcctccg tgacgatggg ttcgagggga aaggtcggtg gcgcctcgcc
     2941 gggcttgaag gtgtaggcca tgggccggtg gcccttcagc tccagccgca gggcatcgcc
     3001 ggcctgcagg ggctggttca tgggcgtggt gcccacggcc agatcgttca cgaagacctt
     3061 ggcgcccgtg ggctgggaat cgatctggag ccgctcgccc cgggggcccc ggaacaggaa
     3121 ccagcccccc accgccagga gggccaccac ggcagcggaa agccagatgc gcccgccccc
     3181 ccggggcggg gccggcggca ccatcatggt ctcgtcgaag gaggtggagc ggatcgatgg
     3241 gatcggggaa tccccgttca tcctcaggag gcccaggagc tcccgccgat cctccttgcc
     3301 gaggtccacc acggcatcca gcaggtcgcg cacgaaggcc gtgcaggtgg catggcgatc
     3361 ctcggggcgc ttggccaaca ccttgccgaa gacccgccgc caaccctcag gcagcatgcc
     3421 caataccggt ggctgcacct cgatgggcgg ctcgttcacg atgcggtaga ggatggtgtt
     3481 gatggaggtg ccggggaacg gcgattggcc gctcatcagc tcgaagacca gcacgccgaa
     3541 gctgaagatg tccgaacggc tgtccacggt gccctcgcgg atctgctcgg ggctggcgta
     3601 gctgggggtg cccaggaagg tgccggtctg ggtgaggctg gcgtcctcgc gcttggcgat
     3661 gccgaagtcc atgagcttgg gccggccgtc ctcgcccacc atcacgttgc ccggcttcac
     3721 gtcgcgatgg acgatcccct tggcgtgggc gtggtccagg gcctcggcaa cgccggcggc
     3781 gatccgcaat ttctccttgt tgggcagaac ggcgtcatct ttcatgagtc cgtccagggg
     3841 cttgcccggc acgtactcca tggccaggaa gggaccgtag ccctcctcct cgcccacgtc
     3901 gtagatggcc acgatgcccg gatggttcag cagcccggag acctcggcct cccgctggaa
     3961 gcgcatcagg tgctcgtgct tgtccgcctc ggtcttcacg gcgtccagct tcatgagctt
     4021 gatggccacc ttgcgcttga tgcggggatc ctccgcaagc acgacgctgc ccatggctcc
     4081 cgagcccagg aggcggagga cctggtagcg gccgatggtc tgggggaggt tcaggtggtc
     4141 gaggtcgccc atggttgcca tcctaccgga cgcatcggag atgaggcggt agattgttag
     4201 gtttttcgtg gattttccaa ccactcctgc cacactataa gcaggcctgc tgacccgggc
     4261 tgtgggaggt ttattccgtg atggacgtcg tcaagaccat cgtgctcggc acctacttca
     4321 cgctgctcac catcctgagc atctacgggg cccaccgcct ctggatgctg ctgctctact
     4381 accgccacaa gaaggatgtg ccgcagccca agggcgatgc cagctacctt ccggtggtca
     4441 cggtgcagct ggcggtgttc aacgagatga acgtcatcga gcgcctcatg gaccatgtcg
     4501 tgaagatgga ctggcccaag gagaagctcg agatccaggt gctggacgac tccacggacg
     4561 agaccgtcaa ggtggccagt gccgtggtgg accgctacaa ggccctgggc ttcgacatcc
     4621 actacctcca tcgcacggat cgcacgggct tcaaggccgg cgccctctcc gaaggcctca
     4681 aggtcgccaa gggcgagctg gtggccatgt tcgacgcgga cttcctgccc acggaagact
     4741 tcctgcgcaa ggccgtgccc cacttcgccg ataccaaggt ggccttcgtc cagggctgct
     4801 gggcccacct gaaccgcgag ttctcgctgt tgacccaggt gcaggccatc ctgctcgacg
     4861 gccacttcgt gttcgagcac acggcccgcc accggtccca tgccttcttc aacttcagcg
     4921 gcaccgcggg catgtggcgg gtcgccgcca tcgccgacgc cggcggctgg gagcacgaca
     4981 ccatcaccga ggacgcggat ctttcctacc gcgcccagct caagggctgg aagggcgtct
     5041 acctcaagga tctcgtcgtc cccgccgagc tgcccgtgga ggtcaacgcc ttcaagagcc
     5101 agcagcaccg ctgggccaag ggcaacgccc aggtcatccg caagctcatg gccaccatct
     5161 ggaagtccaa cgagagcctg cacaccaagc tggaatgctg gttccacctc acggccaact
     5221 gcaactacat gctgatggtg gtgctctccg tgatcatggt gcccgccatg atcttccggg
     5281 ccggcactcc ggtgcatgtc ctgctgctca cggacgggcc cttcttcctg ctgaacgcgg
     5341 tcagtgtggg cctctatttc gggctctccc agaaggagct gacggacaac accggctggg
     5401 cgaagcggct gaagtacatc cccggcctca tgggcctggg catcggcctc gcgctgaacc
     5461 aggccaaggc cgtgctggaa ggtttcttca ccgatgacaa ggagttcaag cgcaccccca
     5521 agtacggcgt ggacgcgagc ggcaagaccg tcaccaagcg cgcctacaaa gtgcccaaga
     5581 gcctcatgac cttcctggag ctgggcttcg ccatctacta cttcggcgcg gtgctggtgg
     5641 ccatctacct ccgcaag
//
LOCUS       DASUDT010000019         7185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1318, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000019 DASUDT010000000
VERSION     DASUDT010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7185
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VFV26_00465"
     CDS             complement(<1..387)
                     /locus_tag="VFV26_00465"
                     /inference="COORDINATES: protein motif:HMM:NF017534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX4844656.1"
                     /translation="MTDHPDYWNRIYEDEGRPGWDMDGATPLVGELLELARPLGLRPG
                     ASLVVPGCGYGHDAVDLEARGFAVTGLDFAPLAIQGAMQRYGDRVAWSQADWFTTHLG
                     PWDAIFDHTCFVAMDPARRTAYVEACA"
     gene            complement(392..1135)
                     /locus_tag="VFV26_00470"
     CDS             complement(392..1135)
                     /locus_tag="VFV26_00470"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HEX4844657.1"
                     /translation="MGLWHRRLGYALFLPLILWMGTALAFVLWPIRTVRGTAASTGRT
                     APATGPIAWTLPPADRLAGASMVTLRQVEGHPVAVIDRGKDTELWDLSARESLGAVLP
                     LPWAREAARRDFAGSYEEAAAYLFPRTGSGIRVAGTGPDSLDQPGEYAGPRPAYAFHL
                     RPGNTRIYVDALSGEVRARRNAIWRFYDLAFRLHSFEFTSDGIKRAVLGAVASLWFAL
                     GVTGLLLAARGWRKRSPDSSPRRRGQASS"
     gene            complement(1179..2372)
                     /locus_tag="VFV26_00475"
     CDS             complement(1179..2372)
                     /locus_tag="VFV26_00475"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEX4844658.1"
                     /translation="MADPLPLIPASAARRLLLGAQGLLDDPARRATPASLQALVERLG
                     FVQVDTINVVARAHDLTLSSRLDGYRPEQLRRLLEDKRSLFEGFTHDASAIPTAFFPQ
                     WKPRFERDRARIHAHAWWQHHFRGTDGARVVRDVKARIEHEGPLKSSDFEHPEKRGPW
                     WGWKPQKAALDFLWRSGELMIPRREGFQKVYDLTERVLPEHHARPCPGPAEHLEWACG
                     TAAERLWVFTPKELAEFWASVEAAEAKAWCVAAAKAGRLVPVQVESAGGELRPAFALA
                     DWEARLAKLPEPPARTRLLCPFDPILRDRARALRRFGFDYRFEAFVPEPKRQYGYFVL
                     PILEGDRLVGRLDPKLHRDRGLLEIKGLWWEPGIKATRARKRGLDEALERLATFVGAE
                     DIHES"
     gene            complement(2751..4280)
                     /locus_tag="VFV26_00480"
     CDS             complement(2751..4280)
                     /locus_tag="VFV26_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4844659.1"
                     /translation="MRKKSLVMTLFLPLGTTLAALFVLLTLLVNRSQSARIRQDFEEN
                     LRAIGTNSRYMLHGEAEAYAKQAGMAYHRVPLGQAGQGPEGDIERTAIRAFEAQPTLE
                     SFTGRYAGADGAQWMYVVAPGRLQESCQTCHQALGITSFDGRKPGDFVATFGISRSTA
                     DIVRQERTFQWTAAVIGLATLVVMGGLIGYFVRRIILRPLEDLGASITRVAEGDFTVL
                     ATAKTDDEIGVLARTFNGMVDRLNRALREVETASQGVASGATQLAASAEQIFKTVEET
                     AHVGEDLRQAGGGVREALQRLGANIARLDENALETGARTQAAAQDTEDGARAGKEAEG
                     GMAAIREATGQILQAVRIIQEIARQTNLLSLNAAIEAAKAGAQGKGFAVVAEEVRKLA
                     ERSATAATEIRGLTDQTEAAVSRGIESVANTLGKLDSIRDRIGEVTLQVQGVADLSRG
                     QEAASQEVDGLMAGTADKLQQNAAATQELAATVTEITRTAEELSKVADGLRVLVQRFR
                     L"
     gene            complement(4406..6421)
                     /locus_tag="VFV26_00485"
     CDS             complement(4406..6421)
                     /locus_tag="VFV26_00485"
                     /EC_number="1.3.1.34"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008670 - 2,4-dienoyl-CoA reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0033543 - fatty acid beta-oxidation,
                     unsaturated, even number, reductase/isomerase pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HEX4844660.1"
                     /translation="MSYPHLLAPLDLGFTTLRNRVLMGSMHTNLEEAKGGFAKLAAFY
                     AERAKGGVGLIVTGGIAPNLRGRLTPFGSQLSWPWQVAKHRKVTEAVHAEGGKIALQI
                     LHGGRYSYHPLSVAPSALKSPITPFKPRALSERGIRGTIRDYARCAALARKAGYDGVE
                     IMGSEGYLINEFIAARTNRRTDGWGGSYENRMRFPVEVLKAVREAVGPDFIVIFRLSM
                     LDLVPEGSDWDEVVQLAKALEAAGATILNTGIGWHEARVPTIGAMVPRGAYAWVTKKL
                     KGAVGIPVIATNRINTPEIAEEILAGGGADMVSMARPLLADPDFVAKAAGDRAADINT
                     CIACNQACLDHVFAQKRATCLVNPRACYETELVFEPAYAPRHIAVVGGGAAGLSFACH
                     AAERGHMVTLFEAQAELGGQLNLAKRVPGKEEFYETLRYFGRRLATAGVAVRLGERAT
                     PELLAGFEEVILASGVRPRTPPIPGVDHPKVISYPDLLSGRKVAGATVAVIGAGGIGF
                     DVAEFLAQPIHGPQVDTYLREWGVDGAHGHRGGLLPAPQPPAPARQVFLLQRKTDRMG
                     AGLGKTTGWIHRAGLKAMKVKMQGGIHYERIDDEGLWIRDGKDAGSRCLPVDSIVLCA
                     GQESERSLAEPLTALGVSVHLIGGADLAAELDAQRAIRQGAELAARI"
     gene            complement(6494..6754)
                     /locus_tag="VFV26_00490"
     CDS             complement(6494..6754)
                     /locus_tag="VFV26_00490"
                     /inference="COORDINATES: protein motif:HMM:NF025601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4342 domain-containing protein"
                     /protein_id="HEX4844661.1"
                     /translation="MTTDTSDRTRTEEFKLDGGKVLDKIKDLIHEGNIRRIILKNEQG
                     KTLIEIPLTLGLVGAALLPVFAAVGALAAVATRMVIVVEKAE"
     gene            complement(6894..>7185)
                     /locus_tag="VFV26_00495"
     CDS             complement(6894..>7185)
                     /locus_tag="VFV26_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844662.1"
                     /translation="ALGTFEVEVPVVEALGSEGGRAILEAASVGELSVSWRRGPRKAP
                     AGWSLVPADQPLGAIAAYLCEAESDDGAVENGLLAAPAPGEELGLWRVPALG"
BASE COUNT          997 a         2479 c         2664 g         1045 t
ORIGIN      
        1 ggcgcaggcc tccacgtagg ccgtgcggcg ggccggatcc atggccacga agcaggtgtg
       61 gtcgaagatg gcgtcccagg ggcccaggtg cgtcgtgaac cagtccgcct gggaccaggc
      121 cacgcggtcc ccgtagcgct gcatggcgcc ctggatggcc aggggggcga agtccaggcc
      181 cgtcaccgcg aagccccggg cctcgaggtc cacggcgtcg tggccgtagc cgcagcccgg
      241 caccaccagg ctggcgcccg ggcgcagccc caggggccgg gccagctcca gcagctcgcc
      301 caccaggggc gtggcgccgt ccatgtccca gccgggacgg ccctcgtcct cgtagatgcg
      361 gttccagtag tcgggatggt cggtcatggc atcaggatga ggcctggccg cggcgtcggg
      421 gcgaggaatc gggggaccgc ttccgccacc cccgcgccgc caggagcagg cccgtgacgc
      481 cgagggcgaa ccacagactc gccaccgcgc cgaggacggc gcgcttgatc ccgtcgctgg
      541 tgaactcgaa gctgtggagg cggaaggcca ggtcgtagaa ccgccagatg gcgttccggc
      601 gggcgcggac ttcgccgctg agggcatcca cgtagatccg ggtgttcccg gggcgcaggt
      661 ggaaggcgta ggcgggccgg gggccggcgt attccccggg ctggtccagg ctatccgggc
      721 cggtcccggc cacccggatt ccggatcccg tgcgggggaa caggtaggcg gcggcttcct
      781 cgtaggaccc ggcgaaatcc cgccgcgccg cctcccgcgc ccagggaagg ggcaggacgg
      841 cccccaggct ctcccgggcg gaaaggtccc agagctcggt gtccttcccg cggtcgatca
      901 cggccaccgg atggccctcc acctgccgga gggtcaccat cgaggccccg gcgaggcggt
      961 ccgccggagg aagcgtccag gcgatcgggc ccgtggccgg cgcggtccgg ccggtgctgg
     1021 cggcagtgcc ccgcacggtc cggatgggcc acagcacgaa ggccagggct gtgcccatcc
     1081 aaagaatcag ggggaggaag agcgcatagc ccagccgccg gtgccagagg cccatgcgcc
     1141 ggggagaccg ccggcctggg gacgcgctcg gagctggatc aggactcatg gatatcctcg
     1201 gcgcccacaa acgtcgccag ccgctccagg gcctcgtcca ggccgcgctt ccgggcccgg
     1261 gtggccttga tgccgggctc ccaccagagg cccttgatct ccagcaggcc gcggtcgcgg
     1321 tgcagcttgg gatccaggcg gcccaccagc cgatctcctt cgaggatggg cagcacgaag
     1381 tagccgtact ggcgcttggg ttccgggacg aaggcctcga agcggtagtc gaagccgaag
     1441 cggcgcaggg cccgggcgcg gtcccggagg atggggtcga aggggcagag caggcgggtg
     1501 cgcgccggcg gctccggcag cttcgccagc cgggcctccc agtccgccag ggcgaaggcg
     1561 ggacggagct cgccgccggc gctttccacc tgcaccggca cgaggcgccc ggccttcgcg
     1621 gccgccacgc accaggcctt ggcctcggcc gcctcgacgc tcgcccagaa ctcggccagc
     1681 tccttggggg tgaacaccca cagccgctcc gcggcggtgc cgcaggccca ttccaggtgc
     1741 tcggcggggc cggggcaggg ccgggcgtgg tgctccggca gcacgcgctc cgtgaggtcg
     1801 tagaccttct ggaagccctc gcgccggggg atcatcagct ccccgctgcg ccagaggaaa
     1861 tccagcgcgg ccttctgcgg cttccagccc caccaggggc cgcgcttctc agggtgctcg
     1921 aagtccgagg acttcagcgg gccttcgtgc tcgatgcggg ccttcacgtc ccgcaccacc
     1981 cgggccccgt ccgtgccccg gaagtggtgc tgccaccagg cgtgggcgtg gatgcgggcg
     2041 cgatcccttt cgaagcgggg cttccactgg gggaagaagg ccgtggggat ggcggaggcg
     2101 tcgtgggtga agccctcgaa gaggctccgc ttgtcctcca gcagcctcct cagctgctcc
     2161 ggccggtagc cgtccaggcg gctggacagc gtcaggtcat gggcgcgggc cacgacgttg
     2221 atggtgtcca cctgcacgaa gcccaggcgc tcgacgaggg cctggaggga ggccggggtg
     2281 gcccggcggg ccgggtcgtc cagcaggccc tgggcgccga gcaggaggcg ccgggcggcg
     2341 gaagcgggga tgaggggaag cggatcagcc acggatgaac ccagatgaac acggatgaat
     2401 cagtatccgt gttcgcccgg gttcatctgc gacaaaacca ctcggttccc gagaagattc
     2461 agcccgaaaa gatgaacgcg aagaccgcga aatgccctcc gggcgcgcga agggtgcaaa
     2521 ggaggccgga cccatcccgg acatcccttc gcgggcggcg gccagggcgg cccctgaagc
     2581 cgtccgcagc cgccgcccgc gaagctggtc gcgccaggcg cggccagggg ccggaggccc
     2641 tgatgtcctg tgctgaagcg ctggggtccg tcttcgcgtc cttgacagtt ctcttcgcgc
     2701 ccttcgcgtt cccacccgtt cggctgagcc aagccgacaa ctgggaaagc tcagagccgg
     2761 aagcgctgga ccagcacccg gaggccgtcg gcgaccttcg acagctcctc ggcggtgcgg
     2821 gtgatctccg tgaccgtggc ggccagttcc tgcgtggcgg cggcattctg ctggagcttg
     2881 tccgcggtgc ccgccatgag gccgtccact tcctggctcg cggcctcctg gccccggctg
     2941 aggtcggcca ccccctgcac ctggagggtg acttcgccaa tgcggtcccg gatggaatcc
     3001 agcttgccga gggtgttggc cacgctctcg atgccccggg atacggcggc ctcggtctgg
     3061 tccgtgaggc cgcggatctc cgtggccgcg gtggcgctgc gctcggcgag cttgcggacc
     3121 tcctccgcca ccacggcgaa gcccttgccc tgggcgccgg ccttggcggc ttcgatggcg
     3181 gcattgaggc tcagcaggtt cgtctggcgg gcgatctcct ggatgatgcg caccgcctgg
     3241 aggatctggc ccgtggcctc gcggatggcc gccatgcccc cttcggcctc cttgccggcc
     3301 cgggcgccgt cctcggtatc ctgggccgcg gcctgggtcc gcgcgcccgt ttcgagggcg
     3361 ttctcgtcca gccgagcgat gttggcgccc aggcgctgga gggcctcccg caccccgccg
     3421 cccgcctggc ggaggtcctc gcccacgtgg gcggtctcct ccacggtctt gaagatctgc
     3481 tcggcgctgg cggccagctg ggtggcgccg gaggccacgc cctgggaggc ggtctccacc
     3541 tcgcggaggg cgcggttcag gcggtccacc atgccgttga aggtcctggc caggacgccg
     3601 atctcatcgt cggtcttcgc ggtggcgagg acggtgaagt ccccctcggc cacgcgggtg
     3661 atggaggcgc ccaggtcttc caggggacgc aggatgatcc ggcggacgaa atagccgatg
     3721 aggccgccca tgaccaccag ggtggccagt ccgatgacgg cggcggtcca ctggaaggtc
     3781 cgctcctggc gcacgatgtc ggcggtggac cgggagatgc cgaaggtcgc cacgaaatcg
     3841 ccgggcttcc ggccgtcgaa gctggtgatg ccgagggcct ggtggcaggt ctggcagctc
     3901 tcctggagcc gtccgggcgc caccacgtac atccactggg cgccatcggc ccctgcatag
     3961 cggcctgtga agctctccag ggtgggctgt gcctcgaagg cccggatggc cgtccgttcg
     4021 atgtcgccct ccgggccctg gccggcctgg cccaggggca cccggtggta ggccatcccg
     4081 gcctgcttgg cgtacgcctc cgcctccccg tgcagcatgt agcgggagtt ggtgccgatg
     4141 gcccgcaggt tctcctcgaa atcctgacgg atccgcgcgg actggctgcg gttcaccagc
     4201 agggtgagca ggacgaacag ggccgccagg gtggttccaa gaggcaggaa caacgtcatg
     4261 accaggcttt tcttgcgcac aatcactcca agggggccga agggcgggaa tcctcgttat
     4321 cggctcatcc ctggaatgac gtaattttct tgctcaacga tattggaata aacacaagga
     4381 agtgagggtt ttccaaggca agcgatcaga tccgcgcggc cagctccgca ccctggcgga
     4441 tggcacgctg ggcgtcgagt tcggcggcga ggtcggcgcc gccgatgagg tggacggaca
     4501 cgccgagggc ggtcaggggc tccgcgaggc tgcgctcgga ttcctgcccg gcgcagagga
     4561 cgatgctgtc cacgggcagg cacctggagc ccgcgtcctt gccgtcgcgg atccagaggc
     4621 cctcgtcgtc gatgcgctcg tagtggatgc cgccctgcat cttcaccttc atggccttga
     4681 ggccggcccg gtggatccag cccgtggtct tgcccaggcc ggcgcccatg cggtcggtct
     4741 tgcgctggag caggaagacc tggcgcgcgg gcgccggcgg ctggggcgcg ggcaggaggc
     4801 cgccccggtg gccgtgggcg ccgtccacgc cccattcgcg caggtaggtg tccacctggg
     4861 ggccgtgaat gggttgcgcc aggaactccg ccacgtcgaa gccgatgccc ccggcgccga
     4921 tgacggcgac ggtggcccct gccaccttcc ggcccgagag caggtccggg tagctgatga
     4981 ccttgggatg gtccacgccg gggatgggcg gggtgcgggg ccggacgccc gaggcgagga
     5041 tgacctcctc gaaaccggcc agcagctccg gggtggctcg ctcgcccagg cgcacggcca
     5101 cgcccgcggt ggccaggcgg cggccgaagt agcgcagggt ctcgtagaac tcctccttgc
     5161 cgggcacgcg cttggccagg ttgagctggc cgcccagttc cgcctgggcc tcgaagaggg
     5221 tgaccatgtg gccgcgctcc gccgcgtggc aggcgaagct caggcccgcc gcgccgccgc
     5281 ccaccacggc gatgtgccgg ggcgcgtagg ccggttcgaa gaccagctcg gtttcgtagc
     5341 aggcccgggg attcaccagg caggtggccc gcttctgcgc gaagacatgg tccaggcagg
     5401 cctggttgca ggcgatgcag gtgttgatgt ccgcggcgcg gtccccggcg gccttcgcca
     5461 cgaagtcggg atccgccagc agggggcggg ccatgctcac catgtcggcg ccgcccccgg
     5521 ccaggatctc ctcggcaatc tccggcgtgt tgatgcggtt ggtggcgatg acggggatgc
     5581 ccacggcgcc cttgagtttc ttcgtcaccc aggcataggc gccccggggc accatggcgc
     5641 cgatggtggg cacccgggcc tcgtgccagc cgatgcccgt gttgaggatc gtggcccctg
     5701 cggcctccag ggccttggcc agctgcacca cctcgtccca gtcgctgcct tcgggcacca
     5761 ggtccagcat ggaaagccgg aagatgacga tgaagtcggg gcccacggcc tcccgcacgg
     5821 ccttcaggac ctccacgggg aagcgcatgc ggttctcgta gctgccgccc cagccgtccg
     5881 tgcggcggtt ggtgcgggcc gcgatgaact cgttgatgag gtagccctcg ctgcccatga
     5941 tctccacgcc gtcgtagccc gccttccggg ccagggccgc gcagcgggcg tagtcgcgga
     6001 tggtgccgcg gatgccgcgc tccgacaggg cccggggctt gaagggcgtg atggggctct
     6061 tcagggcgga gggcgccacg ctgagggggt ggtagctgta gcgcccgccg tggaggatct
     6121 ggagggcgat cttcccccct tcggcatgga ccgcctccgt caccttccgg tgcttggcca
     6181 cctgccaggg ccaggacagc tgcgagccga agggcgtgag gcggccccgc aggttgggcg
     6241 cgatgccgcc ggtgacgatg agccccacgc cgcctttcgc gcgctcggcg tagaaggccg
     6301 ccagcttggc gaagccgccc ttggcctcct ccaggttggt gtgcatggag cccatcagca
     6361 cgcggttgcg cagcgtggtg aagccgaggt cgaggggggc cagcaggtgg ggataggaca
     6421 caacggctcc ggggtggtgg ggccagtgta gggccaggcc gcgcctaccc ggagccagga
     6481 tggggcggcg ggcctactcg gccttctcca ccacgatcac catgcgcgtg gccacggcgg
     6541 ccagggcgcc cacggcggcg aagaccggca gcagggccgc gcccaccagg cccagggtga
     6601 gcgggatctc gatgagcgtc ttgccctgct cgttcttcag gatgatccgg cggatgttgc
     6661 cctcatggat caggtccttg atcttgtcga ggaccttgcc gccgtcgagc ttgaactcct
     6721 cggtgcgagt gcggtcagag gtgtcggtgg tcatgggagg ctcctgcggg atgtctccag
     6781 gctatggccc ttcgaggggg cggggccagt gaatcggcga acggcgggcc gggaccggcc
     6841 ggtgcccatc cgaaccggag gctgcgccca gggccgcgaa tggcctgcca aacctagccc
     6901 agggccggca cccgccagag gcccagctcc tcgcccgggg cgggcgcggc cagcaggccg
     6961 ttctccacgg cgccgtcgtc gctctcggcc tcgcacaggt aggcggcgat ggcgcccagg
     7021 ggctggtccg cgggcaccag ggaccagccg gcgggcgcct tccgggggcc ccgccgccag
     7081 gacacgctca gctcgcccac ggaggccgcc tccaggatgg cgcggccccc ttcagaaccc
     7141 agggcttcca ccacgggcac ttccacctcg aaggtgccca gggcc
//
LOCUS       DASUDT010000020         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1547623, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000020 DASUDT010000000
VERSION     DASUDT010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547623"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VFV26_00500"
     CDS             <1..299
                     /locus_tag="VFV26_00500"
                     /inference="COORDINATES: protein motif:HMM:NF013965.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CcdB family protein"
                     /protein_id="HEX4844663.1"
                     /translation="NGAIPFLLDVQSELLSGLGTRVVVPLYRMETAGVRALSRLTPVV
                     VFQGESLVAMVPELAGISRRELGPVSGDLASARAEILQAIDLLLTGFRGREGPY"
     gene            375..1154
                     /locus_tag="VFV26_00505"
     CDS             375..1154
                     /locus_tag="VFV26_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HEX4844664.1"
                     /translation="MVTKGGLLEGKRGLIIGVANKRSIAWGITQKVAEAGAQLCLTYQ
                     NERLGENVRELAADLKNPLLLPMDVGSDSQIVMAFDEIRKKWGKLDFLVHAVAYAPRQ
                     ALEGRFLDTSREDFRVAHDISAYSLTSVCKAAQPLMAEGASIVTLSYLGGCRVVPNYN
                     VMGVAKASLEASVRYLAADLGPQGIRVNAISAGPIKTLAASGISGFGSMLKHHRSRTP
                     LQKDTDQEEVGDAGLFLVSPMGRGITGQVLYVDGGYSIMAD"
     gene            complement(1279..2082)
                     /locus_tag="VFV26_00510"
     CDS             complement(1279..2082)
                     /locus_tag="VFV26_00510"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4844665.1"
                     /translation="MNWAYIGFAAILPLTVALGLTLAVGALQAVRLTRMGGASRAALF
                     RLLRTMALVFPLAFLAASLWDGWRTWRGLLGVALHRPADQRAMGILRAGGKNFLAADP
                     AKSRYWFRRAAEGGDAEAQLIQARALRSGQGLPADPAGALRWAQAAADQGHPDGMVLA
                     GDLLNPGNPDAALLRYRQALATFRERAQRGDANACLAYGLMHQSGKGVAKDPVEGVAW
                     MICARRLGIDPFKGVVIQLSESTLTKPQRAEAAQRAQAIQKTLVPRGKS"
BASE COUNT          346 a          704 c          761 g          353 t
ORIGIN      
        1 cgaacggggc cattcccttc ctgctggatg tgcaatcgga actgctttcc ggcctgggaa
       61 cccgggtggt ggtgcctttg taccggatgg aaacggcggg ggtccgtgcg ctgtcccggt
      121 tgactccggt ggtggtgttc cagggggaat ccctggtggc catggtcccg gaactggcag
      181 gcatttcccg gcgggaactg ggcccggttt ccggtgatct tgcctcggcg cgggcggaga
      241 tcctccaggc catcgacctg ctgctgacgg gattccgggg ccgggaaggc ccgtactgac
      301 cccgggtata gcgcaggggc gggccctggg ggtatgctag tcgattgtct ggacacgact
      361 ctggaggaga tcgcatggtg accaagggcg gacttttgga gggcaagcgc ggtctcatca
      421 tcggcgtggc gaacaagcgg tccatcgcct ggggcatcac ccagaaggtg gccgaagccg
      481 gtgcccagct ctgcctgacc taccagaacg agcgcctggg ggagaacgtc cgcgagctgg
      541 cggcggactt gaagaacccc ctgctgctgc ccatggacgt gggcagcgac agccagatcg
      601 tcatggcctt cgacgagatc cgcaagaagt ggggcaagct cgacttcctg gtgcatgcgg
      661 tggcctacgc gccccgccag gccctggagg gccggttcct ggacaccagc cgcgaggatt
      721 tccgcgtggc ccacgacatc agcgcctatt cgttgacctc ggtctgcaag gccgcccagc
      781 ccctcatggc cgaaggcgcc tccatcgtca ccctcagcta cctgggcggc tgccgtgtgg
      841 tgcccaacta caacgtgatg ggcgtggcca aggccagcct ggaggccagc gtgcgctacc
      901 tggccgcgga cctgggcccc cagggcatcc gcgtgaacgc catctccgcg ggccccatca
      961 agaccctggc ggcttcgggc atctcgggct tcggctccat gctcaagcac caccgctccc
     1021 gcaccccgct ccagaaggat acggaccagg aggaggtggg cgatgcaggc ctcttcctcg
     1081 tgagccccat gggccgcggc atcacgggcc aggtgctcta tgtggacggc ggctacagca
     1141 tcatggcgga ttgagcgcca gcactcgaaa aacaggacag gattaacagg atgaagggcc
     1201 tgattgacag gattaaaagc gcaagaaatt gctttttgaa atcctgttca tccagctttc
     1261 aatcctgttc atcctgtctc agcttttgcc cctcggaacc agggtcttct ggatggcctg
     1321 ggcccgctgg gcggcttcgg cgcgctgggg tttggtgagg gtggattcgc tcagctggat
     1381 gacgacgccc ttgaagggat cgatccccag gcggcgggcg cagatcatcc aggccacccc
     1441 ttcgacggga tccttggcga cccccttccc ggactggtgc atcaggccgt aggccaggca
     1501 ggcattggca tcgccccgct gggcccgttc ccggaaggtg gccagggcct ggcggtagcg
     1561 gaggagggcg gcgtcggggt tcccggggtt cagcaggtcg cccgcgagca ccatgccgtc
     1621 cggatggccc tggtccgcgg cggcctgggc ccagcggagg gcccccgcgg gatcggcggg
     1681 aaggccctgg ccgctgcgca gggcccgggc ctggatgagc tgggcttcgg catcgccccc
     1741 ttcggcggcc cgcctgaacc agtaccggga tttggcggga tccgccgcga ggaagttctt
     1801 tcccccggcc cggaggatgc ccatggcccg ctgatccgcg gggcgatgga gggccacgcc
     1861 cagcagaccg cgccaggtcc gccagccgtc ccagagcgag gcggcgagga aggcgagtgg
     1921 aaacaccagc gccatggtgc ggagcaggcg gaacagggct gcccggctgg ctccgcccat
     1981 ccgggtgagg cgcacggcct ggagggcgcc cacggccagg gtcaggccca gggccaccgt
     2041 cagcggcagg atggctgcga atccaatgta ggcccagttc atgtcagccc ttcagccccg
     2101 cgaggacatc cagcacgtcc tggacgtgcc ccttcacccg gaccttgggc cagacgtggc
     2161 ggat
//
LOCUS       DASUDT010000021         3926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1503470, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000021 DASUDT010000000
VERSION     DASUDT010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3926
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503470"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VFV26_00515"
     CDS             <1..499
                     /locus_tag="VFV26_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844666.1"
                     /translation="ANLTLRARPKEPTFPLAWDNVLRDSDALGYVAATHQSLKDHGPT
                     VWTWYRPFAGADCDAERARLRALDWPACARMVMDDLRPAHPDLEGLVARLDVMRWGHA
                     MVRPEPGLLWDPALLALSRPFGGIHFAHTELSGLALFEEAQDHGLRAAEEALAALGHR
                     GATWR"
     gene            807..2597
                     /locus_tag="VFV26_00520"
     CDS             807..2597
                     /locus_tag="VFV26_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844667.1"
                     /translation="MSTAQVPSLKAAPGEALPTGIEGRLAMLAEQVRGLETRVRALES
                     GALGTAAPGPLQPAVSPFREEGPLLDPALPSPTRILGLVGRVCLILGGGYLIRALVDA
                     GTLPRGAGVAVGLAYAAAWAILADRAKRALDAASHALASVLIAYPLIVESSTRFGILA
                     PELAAAALLAMAVLHAAVAWRRDLQATLWIATLALLGSGFTVMAARQVVAPFVAVFLA
                     LGAGTLWLTYGRRWHGLRWPTALAADAGVLLLTTLAAWPGGPPGAYRGLSLAWAQALA
                     LALAGIYIGSFAVRMLQRRRVMNAFEIIQTALVLLVGFGGALRVSLASGSGTALLGAG
                     VSLAGVGCYAAALPFAADQEETRANFNFFTFLALIFLLLGGPIVLPLPLFSALSGVLG
                     LAAMLAALHLRRTVLVLQSGLYLAVSALVSGWAPWAFRMFTDPAGPAAPMPPAGLASL
                     AALSATLLLFLLRRPPDPVTMRMRPAILVLGAMAAAGFGALAIRLCCGGQAPDPAGLA
                     LARTGVLSALAIALAWLGRKVPVLELRWVVYPLLALTALKFLLEDLAGGRPLTLFLAF
                     MAFGTTLIAAPRLLKRRSAQGDPDTDEEAP"
     gene            2675..3238
                     /locus_tag="VFV26_00525"
     CDS             2675..3238
                     /locus_tag="VFV26_00525"
                     /inference="COORDINATES: protein motif:HMM:NF021235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4844668.1"
                     /translation="MRFTSGPTLAAGLLILLAPAAFANPPAAQPAGAKAPTAQEDIQV
                     PRPPFSEGIFPCTSCHDGKSMKVDPRRRELTDMHGDILLAHGPASRWCLDCHDPVDRD
                     RLRLASGERVAFTASYELCGQCHGDKYRDWRVGVHGKRTGSWSGAKQYLLCVHCHDPH
                     TPRFKAVKPMAPPARPEQIHPRKGGAR"
     gene            3235..>3926
                     /locus_tag="VFV26_00530"
     CDS             3235..>3926
                     /locus_tag="VFV26_00530"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4844669.1"
                     /translation="MTDPKPACPSEGCQSSGCGTTRRDFLGAATAAMAAALTGCDTLS
                     REEFLQRNFKELSSDEVRSVIARLEKEYQAKYGRDVKVADTPPIPGVIFGYALDLSRC
                     IGCRRCVHACVKENNQSRDPEVQWIRVLEMDKEEGVNVHHSDPYYDPAEVPREGHFYM
                     PVQCQQCKKPPCTKVCPVGATWREKDGIVVVDYNWCIGCRYCMAACPYEGRNFNWADP
                     NLPAAELNPETH"
BASE COUNT          509 a         1527 c         1278 g          612 t
ORIGIN      
        1 ggccaacctc accctgcggg cccggcccaa ggagcccacc ttccccctgg cctgggacaa
       61 cgtgctgcgg gacagcgacg ccctgggtta cgtggcggcc acccaccaga gcctgaagga
      121 ccacggaccc acggtctgga cctggtaccg ccccttcgcc ggggccgact gcgacgccga
      181 gcgggcgcgg ctccgcgccc tggactggcc cgcctgcgcg cggatggtca tggacgatct
      241 ccgccccgcc caccccgatc tggaaggcct ggtggcccgt ctggacgtga tgcgctgggg
      301 ccacgccatg gtgcgcccgg aacccggcct gctgtgggat cccgccctgc tcgcgctctc
      361 caggcccttc ggcggcatcc acttcgccca cacggagctc agcggcctgg ccctgttcga
      421 ggaggcccag gaccacggcc tccgggccgc ggaggaagcg ctggcggccc tggggcatcg
      481 cggcgccacc tggcgctgat cggcccggtc cggattcggc cccccctgcc cgggatcagc
      541 ggaggtccgc ctcgcctgtg atgggcgaca catgctcttc cagcctcgtg gaaggttccg
      601 acacccgcag ccatctgttt cttcccagga tctcaagcac ggggcccgcc gggctccgtt
      661 tattttgtga taacaccttt cattgttttc tttatgcatc acttggaatg atttgattga
      721 acttgacgtc tcctggcgca ggacgagcat gggacccagc caaccctatc gatccgtgcc
      781 cgccccacct ccccggagga aggccgatgt ccaccgccca ggttccatcc ttgaaggccg
      841 ccccgggcga agccctgccg accgggatcg agggccgcct cgccatgttg gcggaacaag
      901 tccggggcct cgagacccgg gtccgggccc tggaatcggg agccctgggc acagccgcac
      961 cgggcccgtt gcagcccgcg gtctcgccct tcagggagga aggccccctc ctcgaccccg
     1021 ccctgcccag ccccacccgc atcctggggc tggtggggcg ggtctgcctc atcctgggcg
     1081 gcggctatct catccgcgcc ctggtggatg cgggaaccct gccccggggc gccggcgtgg
     1141 ccgtggggct cgcctatgcc gccgcctggg ccatcctggc cgaccgcgcc aagcgcgccc
     1201 tggatgccgc ctcccacgcc ctggcctcgg tgctcatcgc ctatccgctc atcgtggaat
     1261 ccagcacgcg cttcggcatc ctggccccgg agctggcggc tgcggctctg ctggccatgg
     1321 cggtcctcca cgccgccgtg gcctggcgca gggacctcca ggccaccctc tggatcgcca
     1381 ccctggcgct gctgggctcg ggctttaccg tcatggccgc ccgccaggtg gtcgcgccct
     1441 tcgtcgccgt cttcctcgcg ctgggggccg gaaccctgtg gctcacctat gggcggcgct
     1501 ggcacggcct ccgctggccc acggccctgg cggcggatgc aggcgtgctg ctgctgacga
     1561 ccctggccgc ctggcccggg gggccgccgg gcgcctaccg cggactctcc ctggcctggg
     1621 cgcaggccct cgccctcgcg ctggcgggga tctacatcgg cagcttcgcg gtgcggatgc
     1681 tccagcggcg ccgggtgatg aacgccttcg agatcatcca gacggccctg gtgctcctgg
     1741 tgggtttcgg cggcgccctg cgcgtctccc tggcctccgg atcgggaacc gccctcctcg
     1801 gcgcgggcgt gtcgctggcg ggcgtgggct gctacgccgc cgccctgccc ttcgcggccg
     1861 accaggagga gacccgtgcg aacttcaact tcttcacctt cctcgccctg atcttcctgc
     1921 tgctgggcgg tcccatcgtc ctgccgctgc ccctgttctc ggccctcagc ggggtcctgg
     1981 gcctggcggc catgctggcg gcgctccatc tccgccggac ggtcctggtg ctccagagcg
     2041 gcctctacct ggctgtgtcc gcgctggttt ccgggtgggc cccatgggcc ttccgcatgt
     2101 tcacggatcc cgcggggccc gccgcgccca tgcccccggc ggggcttgcc agcctggcgg
     2161 cgctatcggc caccctgctg ctgttcctgc tgcgcagacc cccggacccc gtcaccatgc
     2221 gcatgcgccc agccattctg gtgctgggag ccatggccgc ggccggcttc ggcgccctgg
     2281 cgatccggct ctgctgcggc ggccaggccc ccgatcccgc gggactggcc ctggcccgca
     2341 ccggcgtgct gtcggccctc gccatcgccc tggcctggct ggggcggaag gtcccggtgc
     2401 tcgagctgcg ctgggtggtc tacccgctcc tggccctcac ggccctcaag ttcctgctgg
     2461 aggacttggc cggcggccgc cccctgaccc tcttcctggc cttcatggcc ttcggcacga
     2521 cgcttatcgc ggccccccgc ctcctgaagc gccgatcagc ccagggcgac ccggacaccg
     2581 atgaggaggc cccatgaggc ctgaccaccc gcccaccggc ccgaaccctg gtcctccgcc
     2641 atccggcgca cccgcttcgc gaaaggaacc tcccatgcgc ttcacctcag gacccacgct
     2701 ggcagcaggc ctgctgatcc tcctggcccc cgcggccttc gccaatcccc cggcggccca
     2761 gccggccggg gcgaaggccc ccacggccca ggaggacatc caggtgccca ggccgccctt
     2821 cagcgaaggc atcttcccct gcacctcctg ccatgacggg aagagcatga aggtcgaccc
     2881 gcgtaggcgg gagctcacgg acatgcacgg cgacatcctg ctcgcccacg ggcccgccag
     2941 ccgctggtgc ctggactgcc acgatcccgt ggaccgcgac cggctgcggc tggccagcgg
     3001 ggagcgggtg gcgttcacgg cctcgtacga gctctgcggc cagtgccatg gcgacaagta
     3061 ccgcgactgg cgcgtgggcg tccacggcaa gcgcaccggc agctggagcg gggccaagca
     3121 gtacctgctc tgcgtccact gccacgatcc ccacacgccc cgcttcaagg ccgtgaaacc
     3181 catggcgccg cccgcccgcc ccgaacagat ccatcccagg aaagggggtg cccgatgacg
     3241 gacccgaagc ccgcctgccc ctccgagggc tgccagtcct ccgggtgcgg aaccacccgc
     3301 cgggacttcc tcggcgcggc caccgccgcc atggccgcgg ccctcacggg ctgcgacacg
     3361 ctcagccggg aggaattcct ccagcgcaac ttcaaggaac tctccagcga cgaggtgcgc
     3421 tccgtcatcg cccgcctgga gaaggaatac caggcgaagt acggcaggga cgtgaaggtg
     3481 gccgacacgc cgcccatccc cggcgtgatc ttcggctacg ccctggatct cagccgctgc
     3541 atcggctgcc gccgctgcgt gcatgcctgc gtgaaggaga acaaccagtc ccgggatcct
     3601 gaggtccagt ggatccgcgt cctcgagatg gacaaggagg agggggtcaa cgtccaccat
     3661 tcggatccct actacgatcc ggccgaggtg ccccgcgaag ggcacttcta catgccggtc
     3721 cagtgccagc agtgcaagaa gccgccctgc acgaaggtct gtcccgtggg cgccacctgg
     3781 cgcgagaagg acggcatcgt ggtggtggac tacaactggt gcatcggttg ccggtactgc
     3841 atggccgcct gcccctacga gggccggaac ttcaactggg ccgacccgaa ccttccggcg
     3901 gccgagctca atcccgagac ccacta
//
LOCUS       DASUDT010000022         2096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1083790, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000022 DASUDT010000000
VERSION     DASUDT010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083790"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /locus_tag="VFV26_00535"
     CDS             complement(<1..930)
                     /locus_tag="VFV26_00535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX4844670.1"
                     /translation="MKALEIALFWIMTLAAGGFFVWTMRNRLATLKAGLPDNRFDQPW
                     VRLKGVFTLALLQKRMVRDKYAGFYHILIFWGFCVLALRSVGLVVEGLFPAFHMTEVL
                     GRFGLGYQYTKDIFEVLVLVGLGLAAFRRLAAKPWRLENSWDAWATLSLIGGLMITDL
                     LADGAFVALHKPEWAPWSPAGVAVAGWLGGLSETGLTVLYKTMWWLHLAVLYFFANFL
                     PYSKHFHVFTSLFNIYFRELEPQKNLKPMDLEAEHFGINRIQDFTWKQMLDLYTCTEC
                     GRCLEHCPTTLTGKPLRPKNFGNDLRDYLYATPL"
     gene            1079..1432
                     /locus_tag="VFV26_00540"
     CDS             1079..1432
                     /locus_tag="VFV26_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844671.1"
                     /translation="MGAPSPLMFEAAVTRPLSVVFRVGEAWEGHDYTVEVVAARQGLD
                     GFDVVVDFRDLEAALDRSLAPLQGKLLSDLGLDGPLALIRRLLAELAPFVPAPARLKE
                     VALTDGTGRRMAVSG"
     gene            1573..2019
                     /gene="lepB"
                     /locus_tag="VFV26_00545"
     CDS             1573..2019
                     /gene="lepB"
                     /locus_tag="VFV26_00545"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX4844672.1"
                     /translation="MRPWIPIAALALALSPLAVVHPVRVSGRSMEPALRDGDLAWALR
                     AWASHAPRRAEVWTVLGPQGPSIKRVIGLPGDTVRWEGPDIWINGQPLAEPWVVHPER
                     SGSGAVLCGAGYLALGDNRPESQDGRSWGALPATAMQGRLLGGGRP"
BASE COUNT          328 a          687 c          739 g          342 t
ORIGIN      
        1 gagcggggtg gcgtacaggt agtcgcgcag gtcgttgccg aaattcttcg gccgcagcgg
       61 cttgccggtg agcgtggtcg ggcagtgctc caggcagcgg ccgcactcgg tgcaggtgta
      121 gaggtccagc atctgcttcc aggtgaagtc ctggatcctg ttgatgccga agtgctcggc
      181 ctccaggtcc atgggcttca ggttcttctg gggctccagc tcccggaagt agatgttgaa
      241 gaggctggtg aaaacgtgga agtgcttgga gtagggcagg aagttggcga agaagtagag
      301 gacggccagg tgcagccacc acatggtctt gtagagcacc gtgaggcccg tctcgctcag
      361 gccgcccagc cagcccgcca cggccacgcc cgccggcgac cagggagccc actcgggttt
      421 gtgcagcgcc acgaaggcgc catccgccag caggtccgtg atcatcaggc cgccgatgag
      481 gctcagtgtc gcccaggcat cccaggagtt ttccaggcgc cagggcttgg ccgccaggcg
      541 ccggaaggcc gccaggccga ggcccaccag caccagcacc tcgaagatgt ccttggtgta
      601 ctggtagccc aggccgaagc gccccaggac ttcggtcatg tggaaggcgg ggaagaggcc
      661 ctccaccacc agccccacgg agcgcagggc cagcacgcag aagccccaga agatgaggat
      721 gtggtagaag cccgcgtact tgtcgcgcac catgcgcttc tgcagcaggg ccagggtgaa
      781 gacgcccttc aggcgcaccc agggctggtc gaagcggttg tccggcaggc cggccttcag
      841 cgtggccagg cgattccgca tggtccagac gaagaacccg cccgcggcca gcgtcatgat
      901 ccagaacagc gcgatttcca gggccttcat ggggtccctc cttgcagtca acgttcaaag
      961 cggtccatgg cgaggggctg cgggcctctc cattgtctca cccggttatc aggtatgcgg
     1021 tcgaaggccc agtgtagccg tggccatgac aaactgaagg cccgacctgg agtcagcctt
     1081 gggtgcccct tcccccctga tgttcgaagc cgccgtgacc cgccccctgt cggtggtgtt
     1141 ccgcgtgggc gaggcctggg agggccacga ctacacggtg gaagtggtgg ccgcgcggca
     1201 gggcctggat ggcttcgatg tggtggtgga cttccgcgat ctggaggccg ccctggaccg
     1261 cagcctggcg cccctgcagg ggaagctcct gtcggacctg ggcctggatg gacccctggc
     1321 cctgatccgg cgcctgctgg cggagctcgc gcccttcgtc cccgcccccg cccgcctcaa
     1381 ggaagtggcg ctgacggatg ggacggggcg gcggatggcg gtgtctggat gagtctggag
     1441 tccggagtct ggagtctggg ggttgggctg ggaggcccga tcgttcttcc gatccctgag
     1501 ggaatggaag gtgcggcctg cagggccgcc tcaagtcgta cctccagact ccagaccccg
     1561 gactgatccc ccgtgcgtcc ctggattccc atcgccgccc tggccctggc cctctccccc
     1621 ctggcggtgg tgcatcctgt ccgggtatcc ggccgcagca tggaaccggc gctccgggat
     1681 ggcgacctgg cctgggccct gcgggcctgg gcctcccatg cgccccggcg cgccgaggtc
     1741 tggactgtcc tcgggcccca gggcccgtcc atcaagcggg tgatcggcct ccccggcgac
     1801 accgtgcggt gggaggggcc cgatatctgg atcaacggcc agccgctggc cgaaccctgg
     1861 gtggtccacc ccgagcgttc cgggagcggg gccgtcctat gcggcgctgg ctacctggcc
     1921 ctcggcgaca accggcccga aagccaggac gggcggagct ggggagccct tccggcaacc
     1981 gccatgcagg ggcggctgct gggaggcggc cgcccctgac tgccttcgtg gcgtttgtcg
     2041 ggcgctctaa taccaagtag cgttcaaaga tagagattca ccacggagac accgag
//
LOCUS       DASUDT010000023         4999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1437374, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000023 DASUDT010000000
VERSION     DASUDT010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4999
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437374"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VFV26_00550"
     CDS             complement(<1..920)
                     /locus_tag="VFV26_00550"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX4844673.1"
                     /translation="MIEVWRHTLEAAPASGPFLVTLGTFDGVHAGHRELLRIAAARAK
                     AVGLRAAVVTFDPHPAVVVAPQRKPKLLMTLEQRLAAFEAEGMDLAWVIPFSRTFSEL
                     SPAAFLDGLRTVLSPVELHVGRAFAFGRDRSGTVETLEAWGAEHGCAVHTLALRAPDG
                     GRLSSTRIREALDRGEVDAAAELLGHPYTLTGVVVEGDRRGRHLGFPTANLAWEQEQL
                     PAFGVYVTEAFLPHHGGARLGLTNVGEKPTFEGQRLTVETHLPDFEEDLYGARLHVRF
                     LHRLRGEARFASVDELRDQIARDVAEGTAW"
     gene            complement(917..1861)
                     /locus_tag="VFV26_00555"
     CDS             complement(917..1861)
                     /locus_tag="VFV26_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX4844674.1"
                     /translation="MVDALLQAAPWWAWAGFHVFVFLMLALDLGVFNRKIHAPTMREA
                     GIWSAVWITLALIFNALIFQAEGTQKGLEWFTGYVLEKSLSVDNLFVFVLVFQSFQVD
                     LRHQHRVLFWGVLGALIMRAAMILAGTALLNRFHWMIYVFGGFLIFTGIKMLLVKGED
                     ADPTQNPMVRAFRRFVPYDEKGGHEHFWSIQNGRRYATPMLLVLITIEVTDLVFAVDS
                     IPAVLAVSRDPFVVYTSNIFAILGLRSLYFLLAKMIDRFHRLKTGLAVVLTFVGVKMC
                     IAEWVKIPVHYSLLVIGAVLAGSVIASLAWPTEQGGAE"
     gene            1921..2649
                     /locus_tag="VFV26_00560"
     CDS             1921..2649
                     /locus_tag="VFV26_00560"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HEX4844675.1"
                     /translation="MSLPRFFLDAPLDAAPAAENLVVPLGAEAAQHLRALRLKPGAAL
                     ELVLGGQPWTADLAELDRGRALARLVAPFHEDRESPIPLQACLPLTAQLSLFDEWLPP
                     LVELGATLIQPVAYARSEFDAAKTTARMERWARIIQSAAEQSHRSRLPELRPAVPFGA
                     LVAWGCSQKWVAYELATGQANPALRREPLAFTSGPEGGITEGEFTALAAAGWQPVSLG
                     RSILRAVTAPVALLGAVQFELGRG"
     gene            2796..3293
                     /locus_tag="VFV26_00565"
     CDS             2796..3293
                     /locus_tag="VFV26_00565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844676.1"
                     /translation="MKLVTLLSAALLTAASLAAGDYDALGKALRQNWPQAATVAVVCD
                     SAHNKGALDAIASALPGVKLLVIDVKSQQDVGKALSTLGARRPDAVILVAGDKVVGDG
                     TSAASFLIQRLAAAKVPTVATTEAGVRQGAVLGVGPGTGGKLLANAKVALVAGVSLPA
                     GASQI"
     gene            3348..4967
                     /locus_tag="VFV26_00570"
     CDS             3348..4967
                     /locus_tag="VFV26_00570"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEX4844677.1"
                     /translation="MRVLLPLLAASALLVQAAPPPPVQEAPLRAHLAFLADDLLEGRG
                     TGQRGAELTVRYLETQLQTLGLKPARGTSYRQPVALLGFQTLVARSTLSFMGGGACAT
                     PAFGSEIVFGTGVAQAEQAFDAPVVFAGFGITSPENRWDDFKGLDLKGKVLLALVNEP
                     APTAGEPGLFDGPDLSYAGRWTYKFEEAARRGARGILLVHTTPSASYGWPVVRNGWEL
                     ERFELAKAPAGTALQGWVTEDLARSLVKQGGQDLDALRAAAQRRDFRPVPLDLRLKGT
                     LHSAVRTLDQFNVAGVVPGTDPALKDELVVYSAHWDHLGKGAAAADTHPGQPGDTTYN
                     GAVDNASGCAALLAMAQSAIQAPARRSQMFLFVCGEEQGLLGSKAYAAQPLWPLAKTA
                     ANLNLDSLNFVAPTRDIGLPFANRSTLGDLGLAVAKASGLSVAPPRVDAGGGYFRSDH
                     YSFVQAGVPALSVGGGRDYLGADPAALKAKAAAYGKRYHQVTDEYDPTWDLSGMTQEA
                     QIAFNLGQAVANAAAMPTWKAGDPFGRARAK"
BASE COUNT          767 a         1846 c         1682 g          704 t
ORIGIN      
        1 caccaggccg tcccctcggc cacgtcccgg gcgatctggt cccgcagttc gtccaccgac
       61 gcgaagcggg cctctccccg gaggcggtgc aggaagcgca cgtgcagccg ggcgccatag
      121 aggtcttcct cgaagtccgg caggtgggtt tccaccgtga gccgctggcc ttcaaaggtg
      181 ggtttctcgc ccacgttggt gagcccgagc cgggcgcccc cgtggtgggg caggaaggcc
      241 tcggtcacat agacgccaaa ggccggcagc tgctcctgct cccaggccag gttggccgtg
      301 gggaaaccca ggtggcggcc ccgccggtcg ccttcgacca ccacccccgt cagggtgtag
      361 gggtggccca gcagctccgc cgccgcatcc acctcgcccc ggtccagcgc ttcgcggatg
      421 cgggtgctcg aaaggcgtcc gccgtccggg gcccgcaggg ccagggtgtg gaccgcgcat
      481 ccgtgttccg cgccccaggc ttccagggtc tccaccgtgc cgctgcggtc gcggccgaag
      541 gcgaaggccc ggcccacatg cagctccacc ggggacagca ccgtgcgcag gccgtccagg
      601 aaagccgccg ggctcagctc agagaaggtg cggctgaagg ggatcaccca ggccagatcc
      661 atgccctcgg cctcgaaggc cgccaggcgc tgttcgaggg tcatcagcag cttgggcttg
      721 cgctggggcg ccaccaccac cgcggggtgg gggtcgaagg tgacgacggc ggcccgcagc
      781 cccacggcct tggcccgggc cgccgcgatc cggagcagct cccggtggcc cgcgtggacc
      841 ccatcgaagg tgcccagggt gacgagaaag ggcccggaag ccggcgccgc ctcgagggtg
      901 tggcgccaga cctctatcat tccgccccgc cctgttcggt gggccaggcc aggctggcga
      961 tgacgctgcc cgccagcacc gccccgatga ccagcaggct gtagtgcacg gggatcttca
     1021 cccactccgc gatgcacatc ttcacgccca cgaaggtgag caccacggcc aggcccgtct
     1081 tcaggcgatg gaagcggtcg atcatcttgg ccagcaggaa atagaggctc cgcaggccca
     1141 ggatggcgaa gatgttggag gtgtagacca cgaagggatc gcggctcacg gccagcacgg
     1201 cgggaatgga gtccaccgcg aagaccaggt ccgtgacctc gatggtgatg agcaccagca
     1261 gcatgggcgt ggcatagcgg cgcccgttct ggatggacca gaaatgctcg tggccgccct
     1321 tctcgtcata gggtacgaag cgccggaagg cccgcaccat cgggttctgc gtggggtcgg
     1381 catcctcgcc cttcaccagg agcatcttga tgcccgtgaa gatgaggaag cccccgaaca
     1441 cgtagatcat ccagtggaag cggttcagga gggccgtgcc cgccaggatc atggcggcgc
     1501 gcatgatcag ggcccccagc acgccccaga agagcacccg gtgctggtgg cgcaggtcca
     1561 cctggaagct ctggaacacc aggacgaata cgaagaggtt gtccacgctg agcgacttct
     1621 cgagcacgta gcccgtgaac cactccagcc ccttctgggt gccctccgcc tggaagatca
     1681 gcgcgttgaa gatgagggcc aacgtgatcc acaccgcgct ccagatcccc gcctcccgca
     1741 tggtgggggc gtggatcttg cggttgaaga cgcccagatc cagggcgagc atgagaaaca
     1801 cgaagacatg gaatccagcc caggcccacc agggggcggc ttgcagcagt gcgtcgacca
     1861 agggtcctcc caaacatcca gcttatcgag acagggaagg ccccgtggga tgatggtctc
     1921 gtgagccttc cccgcttttt cctcgatgcc ccgctggatg ccgctcctgc ggcggaaaac
     1981 ctcgtggtgc ccctgggcgc cgaggccgcc cagcacctgc gggccctgcg cctgaagccc
     2041 ggggcggccc tggaattggt cctggggggt cagccctgga cggcggatct ggcagaactg
     2101 gaccggggcc gcgccctggc ccgcctggtg gcacccttcc acgaggaccg cgagtccccc
     2161 atccccctcc aggcctgcct gcccctgacg gcccagttga gcctcttcga cgaatggctg
     2221 ccccccctcg tggaactggg cgccaccctc atccagcccg tggcctatgc gcgcagcgaa
     2281 ttcgatgccg ccaagaccac ggcccgcatg gagcgctggg cccggatcat ccagtcggcg
     2341 gcggagcaga gccaccgcag ccgcctgccg gaactgcggc ccgccgtgcc cttcggggcc
     2401 ctggtggcct gggggtgctc acagaagtgg gtggcctacg agctggccac gggccaggcc
     2461 aaccccgccc tgcgccggga gcccctggcc ttcaccagcg ggcccgaggg gggcatcacc
     2521 gagggcgagt tcaccgccct cgcagccgcg ggttggcagc cggtgagcct ggggcgcagc
     2581 atcctccgcg ctgtgacggc cccggtggcc ctgctgggcg cggtgcaatt tgagctgggg
     2641 cggggctgag actctggtca caccttctac cgacgcatgc ttaaatcacc atcaatcaac
     2701 cacttgatcc aatcaagaag tggtgctgca aggccgatga gatctccaga gccggttccg
     2761 gggcactccc ggaaggcccc aaggagatcg acttcatgaa gcttgtgacc cttctgtccg
     2821 ccgccctgct caccgccgcc tcgcttgcgg ccggcgacta cgacgccctc ggaaaggccc
     2881 ttcgtcagaa ctggccccag gccgccacgg tggccgtcgt ctgtgattcc gcccacaaca
     2941 agggcgccct ggacgccatc gccagcgccc ttccgggcgt gaagctcctc gtcatcgacg
     3001 tgaaaagcca gcaggatgtg gggaaggccc tcagcacgct gggcgcccgg cggcccgatg
     3061 ccgtgatcct cgtcgcgggc gacaaggtgg tgggggatgg caccagcgcc gcctccttcc
     3121 tcatccagcg cctggccgcc gccaaggtgc ccaccgtcgc caccaccgag gcgggcgtcc
     3181 gccagggggc cgtgctgggc gtgggcccgg gcaccggcgg caagctgctg gccaacgcga
     3241 aggtcgccct cgtggcgggc gtgagcctcc ccgcgggcgc cagccagatc tgacgtcgaa
     3301 taaacccctt cttgcgaggt atgctgaagg ctcccccggg agccttcatg cgtgtactgc
     3361 tgccccttct ggccgcgtca gcccttctcg tccaggcggc gccgccacct ccggtgcagg
     3421 aagcccccct gcgcgcccac ctggccttcc tggcggacga cctgctggag ggccggggca
     3481 cgggccagcg cggggccgag ctgaccgtgc gctacctgga gacgcagctc cagaccctgg
     3541 ggctgaagcc cgcccggggc acctcctatc gccagcccgt ggccctgctg ggcttccaga
     3601 ccctggtggc ccgcagcacc ctcagcttca tgggcggcgg cgcctgcgcc acgcccgcct
     3661 tcggctcgga gatcgtcttc ggaaccggcg tggcccaggc cgagcaggcc ttcgacgccc
     3721 ccgttgtctt tgcgggcttc ggcatcacct ccccggagaa ccgctgggac gacttcaagg
     3781 gcctggacct gaagggcaag gtcctgctcg cgctcgtgaa cgaacccgcc cccaccgccg
     3841 gagaaccggg cctgttcgac ggccccgacc tcagctacgc cgggcgctgg acctacaagt
     3901 tcgaggaggc cgcccgccgg ggcgcccggg gcatcctcct ggtgcacacc accccctcgg
     3961 ccagctacgg ctggcccgtg gtccgcaacg gctgggagct ggagcgcttc gagctggcca
     4021 aggcccccgc gggcacggcc ctccagggct gggtcaccga ggacctcgcc cggtccctgg
     4081 tgaagcaggg cggccaggac ctggacgcgc tgcgcgccgc cgcccagcgc cgggacttcc
     4141 ggcccgtgcc cctcgacctg cgcctgaagg gcaccctcca cagcgccgtc cgcaccctgg
     4201 atcagttcaa cgtggcgggc gtggtgcccg gcacggaccc cgccctgaag gacgagctcg
     4261 tggtctactc cgcccactgg gaccacctgg ggaagggcgc ggccgccgcc gacacccacc
     4321 cgggccagcc gggcgacacc acctacaacg gcgccgtgga caacgcctcc ggctgcgcgg
     4381 ccctgctggc catggcccag tcggccatcc aggcccccgc ccgccgcagc cagatgttcc
     4441 tgttcgtctg cggggaggag cagggcctcc tgggctccaa ggcctacgcc gcccagcccc
     4501 tctggcccct ggcgaaaacc gccgccaacc tgaacctgga cagcctcaac ttcgtggccc
     4561 ccacccggga catcggcctg cccttcgcca accggagcac cctgggggat ctgggcctgg
     4621 cggtggccaa ggcctcgggc ctctccgtcg ccccgccgcg ggtggatgcc gggggcggct
     4681 acttccgctc ggaccactac agcttcgtgc aggccggcgt gcccgccctg tctgtgggtg
     4741 gcggccgcga ctacctgggc gccgatcccg cggccctgaa ggccaaggcc gccgcctacg
     4801 gcaagcgcta ccaccaggtg acggacgagt acgatccgac ctgggatctc tcgggcatga
     4861 cccaggaggc ccagatcgcc ttcaacctcg gtcaggccgt ggccaacgcc gcggccatgc
     4921 ctacctggaa ggccggcgat cccttcggcc gcgcgagggc caagtgagcg cctgtcccgc
     4981 ctgcggggcg gaactccag
//
LOCUS       DASUDT010000024         3695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1150125, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000024 DASUDT010000000
VERSION     DASUDT010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150125"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFV26_00575"
     CDS             complement(<1..215)
                     /locus_tag="VFV26_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844678.1"
                     /translation="MTTFPDEAFLAAVPVQALSAEPGEGGTVVLIRPKILSPRWAWLV
                     RLMKRPNFRVKLDARGTALWQACDGTRT"
     gene            complement(369..2519)
                     /locus_tag="VFV26_00580"
     CDS             complement(369..2519)
                     /locus_tag="VFV26_00580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEX4844679.1"
                     /translation="MQPFVPSDQNMREFSLRAVLIGLVMAVVLGSANAYLGLKAGMTI
                     AATYPAAVIGMALIKLMKGTILEENMARTVGSIGESVAAGAIFTVPAFAISGIWPKFF
                     TAGNYVTSSLIMFGGGVLGIMFVALLRRVMVEDAELPYPESVAAAEIHKAGARGGSGT
                     KFLFGAMGLGALIQALVQVQLFATTWEKFAAFKTTAITLTANWKAKVMGGMLLSSPGI
                     SPAYMGVGYIIGPKLGALNFSGGIIAWGLLVPIISYFLAPGVLPENAPQGDWIALSYS
                     VWKFIVRPIAIGGMLVGAGFTLFKMRKSLATGLTRSVSDVKKAASGDHVVDRVNKDLP
                     FTYVVGGILFAAAVTFFVTWQIFQVGVLTSFVAALVMIILGFFFAAISGYLVGIMGSS
                     NNPISGLTLTALVVTALVMVVLGVKGQEGVAAVLGVAAIVCVSAAVAGEMLQDLKAGH
                     ILGGTPWRMEMGDLLGVALASVVLFIPLMVLHEGDITAQGTKRIAELTAQQVQVVTAP
                     DGQTYTLEQVKQLPADQKKAVLALDAGFGSKQLAAPQAGLMALLSRGIVEGKMAWPLI
                     IVGMMMGLAFILMQVKSPMLVSVGMYLPLETTFAIFLGGLIKGAVEMFGAKRGLNEAQ
                     KVRVENNGVLLAAGLIAGEALVGLVFASFAFFEVKYHLTKFIWGMDKTGVTNAPGAFW
                     ISLLILVAIAIYLVKVPLANAGEADEPAPPSANF"
     gene            2808..3647
                     /locus_tag="VFV26_00585"
     CDS             2808..3647
                     /locus_tag="VFV26_00585"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX4844680.1"
                     /translation="MPQGPPPKPRIALVLGGGAARGFAHVGVIRALEQEKIPIDMVVG
                     TSVGGLIGAIYASDLSSFDLEWTAFQLEKEDLFDFGVLNAVTGMGFAKGDKLEAWVKN
                     HIKTANIEHLKIPFAAVATDLNWGYKVVLDKGSVARAIRASAAIPGVFQPVQHQGKIL
                     VDGGVVDNIPISVAKAKGADIVIAVDISGNVGNTNITNLLDVTLQATNIMFALNVEQS
                     KKGADILIAPAGIGDIGMLDFTQKKRSMQAGIEATRRSMPQIRRAINAWVAARSQPPA
                     PAP"
BASE COUNT          681 a         1200 c         1237 g          577 t
ORIGIN      
        1 gtgcgcgtgc catcgcaggc ctgccacagg gccgtgccgc gggcatcgag cttcacacgg
       61 aagttgggcc gcttcatcag ccgcaccagc caggcccagc gcggggacag gatcttgggc
      121 cggatcaaca ccaccgtccc gccctcgccg ggttcggcgg acagcgcctg gacgggtacc
      181 gcagcaagga aggcttcatc gggaaaggtg gtcattcgtc aggctttcaa aataaaacac
      241 tcaccaccaa gacaccaaga caccaagaaa agaatttgtt cttcttggtg tcttctcggt
      301 atccgcgtag cgggtacgcg agacaaaccg aaatctggtg tcttggtggt gatcagttcg
      361 ctttcaacct agaaattcgc actcggcggc gcgggctcgt cggcttcgcc ggcgttggcc
      421 aggggcacct tcaccaggta gatggcgatg gccacgagga tcaggaggct gatccagaag
      481 gcgccgggcg cgttggtgac acccgtctta tccatgcccc agatgaactt ggtgaggtgg
      541 tacttcacct cgaagaaggc gaaggaggcg aagaccaggc ccaccagggc ctcgcccgcg
      601 atgaggcccg cggccagcag cacgccgttg ttctccacgc gcaccttctg ggcctcgttc
      661 aggccccgct tggcgccgaa catctccacc gcacccttga tgaggccgcc caggaagatg
      721 gcgaaggtgg tctccagggg cagatacatg cccaccgaca ccagcatggg gctcttcacc
      781 tgcatgagga tgaaggcgag ccccatcatc attccgacga tgatgagcgg ccaggccatc
      841 ttgccctcca cgatgccgcg gctgagcagg gccatgaggc ccgcctgggg ggcggccagc
      901 tgcttggagc cgaagccggc gtccagggcc agcacggcct tcttctggtc cgcgggcagc
      961 tgcttcacct gctccagggt gtaggtctgg ccgtccgggg cggtgaccac ctgcacctgc
     1021 tgggcggtca gctcggcgat gcgcttggtg ccctgggcgg tgatgtcgcc ttcgtggagc
     1081 accatgaggg ggatgaagag cacgacggag gccagggcca cgccgagcag gtcgcccatc
     1141 tccatgcgcc agggcgtgcc gcccaggatg tggccggcct tgaggtcctg cagcatctcg
     1201 ccggcgacgg cggcgctcac gcagacgatg gcggccacgc ccagcacggc ggccacgccc
     1261 tcctggccct tcacgcccag caccaccatg accagggcgg tgaccacgag cgcggtgagg
     1321 gtcaggccgg agatggggtt gttgctggag cccatgatgc cgaccaggta gccgctgatg
     1381 gcggcgaaga agaagccgag gatgatcatc accagggccg ccacgaagga ggtcaggacg
     1441 cccacctgga agatctgcca ggtcacgaag aaggtgacgg cggcggcgaa gaggatgccg
     1501 cccaccacgt aggtgaaggg caggtccttg ttgacgcggt ccaccacgtg gtcgccggag
     1561 gcggccttct tcacgtcgga aacggagcgg gtgaggcccg tggccaggct cttgcgcatc
     1621 ttgaagaggg tgaagccggc gcccacgagc atgccgccga tggcgatggg acggacgatg
     1681 aacttccaga ccgagtagga gagggcgatc cagtcaccct ggggcgcgtt ctcgggcagg
     1741 acgccggggg ccaggaagta ggagatgatg ggcaccagca ggccccaggc gatgatgccg
     1801 ccggagaagt tcagggcgcc gagcttgggc ccgatgatgt agcccacgcc catgtaggcg
     1861 gggctgatgc cgggggagct gagcagcatg ccgcccatga ccttggcctt ccagttcgcc
     1921 gtgagggtga tggccgtggt cttgaaggcg gcgaacttct cccaggtggt ggcgaaaagc
     1981 tggacctgca ccagcgcctg gatgagggcg ccgaggccca tggcgccgaa gaggaacttg
     2041 gtgccgctgc ccccgcgggc gccggccttg tggatctcgg cggcggccac gctctcgggg
     2101 tagggcagtt ccgcgtcctc gaccatcacg cggcggagca gggccacgaa catgatgccc
     2161 agcacgccgc cgccgaacat gatcagcgag ctggtgacgt agttgccggc ggtgaagaac
     2221 ttgggccaga tgccgctgat ggcgaaggcc gggacggtga agatggcgcc ggcggccacg
     2281 gactcgccga tgctgcccac ggtgcgggcc atgttctctt cgaggatggt gcccttcatg
     2341 agcttgatga gggccatgcc gatgaccgcc gcggggtagg tggcggcgat ggtcatgccg
     2401 gccttgagcc cgaggtaggc gttggcggaa ccgagcacca cggccatgac gaggccgatg
     2461 agcaccgccc gcagggagaa ctcccgcatg ttctggtcgg atgggacaaa gggttgcatc
     2521 gatgctcctg aaagggcgcg aagaggtgaa gaagaatgcc ggatgtagcg gatagtctaa
     2581 taccgaatcc gatccggttg gcatcgtccc ggctgtgcct gcggccgggt ttccgatgca
     2641 aggaacccgt tcccatccat gaaggaggct gcatgcgtct ggtaaacacc cttgccgtcg
     2701 cgggtttgac ccttcttttc gcatgcgaga ctgccccccc cgtcaccgtt ccgcagcccc
     2761 ccatttccca agcgcccccg gttgtccaag caccaccggt tgtccaggtg ccccagggac
     2821 ccccgccgaa accccggatc gccctggtcc tggggggtgg cgcggcccgg ggtttcgccc
     2881 atgtgggcgt catccgggcc ctggagcagg agaagatccc catcgacatg gtggtgggca
     2941 ccagcgtcgg cggcctcatc ggcgccatct acgcctccga cctcagcagc ttcgatctgg
     3001 aatggaccgc cttccagctc gaaaaggagg atctcttcga tttcggggtc ctgaatgccg
     3061 tcacgggcat gggcttcgcc aagggagaca agctcgaggc ctgggtgaaa aatcacatca
     3121 agaccgccaa catcgagcac ctcaagatcc cctttgccgc cgtggccacg gacctcaact
     3181 ggggctacaa ggtggtgctc gacaagggct cggtggcccg cgccatccgg gccagcgccg
     3241 ccatccccgg cgtgttccag cccgtgcagc accagggcaa gatcctggtg gacggcggcg
     3301 tggtggacaa catccccatc tcggtggcca aggccaaggg cgcggacatc gtcatcgccg
     3361 tggacatcag cgggaacgtg gggaacacga acatcaccaa cctcctggac gtcaccctcc
     3421 aggccacgaa catcatgttc gccctcaacg tggaacagtc caagaagggc gccgacatcc
     3481 tcatcgcacc cgccggcatc ggcgacatcg gcatgctcga cttcacgcag aagaagcgct
     3541 ccatgcaggc cggcatcgaa gccacccggc ggtccatgcc ccagatccgc cgggccatca
     3601 acgcctgggt cgcggcccgc tcgcagcccc cggctccggc cccctgattc tccggaaccc
     3661 gccccccatg ccccttctca ccagcaaggc caatc
//
LOCUS       DASUDT010000025         3017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2122148, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000025 DASUDT010000000
VERSION     DASUDT010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2122148"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /gene="bioB"
                     /locus_tag="VFV26_00590"
     CDS             complement(<1..577)
                     /gene="bioB"
                     /locus_tag="VFV26_00590"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEX4844681.1"
                     /translation="MPKSSADIRALHDLPVPELLYRAATAHRQHWNAEEIQFCTLDSI
                     KTGACPEDCAYCPQSARYQTDLKVEPLKDVEKVLAGAAEAKANGSTRYCMGAAWREVK
                     DDANFDAVLDMVRGVSGMGMEVCVTLGMLNEAQAKRLKGAGCQVYNHNIDSSRDFYET
                     IIHTRKFDERLETIQAVRAAGLEVCSGGIVGM"
     gene            794..2920
                     /locus_tag="VFV26_00595"
     CDS             794..2920
                     /locus_tag="VFV26_00595"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase E1 component subunit alpha/beta"
                     /protein_id="HEX4844682.1"
                     /translation="MAANPDQPTPATALSREQRVRLYRTIYAARRIDDKEITGKRQNK
                     VFFQINGVGHEAVQAAAAMVFRPGHDWFFFYYRDRALAYGLGYTAREMFLGSVGAVDD
                     PASGGRQMPSHWGHKGLNIFTTSSPTGSQFLQAVGAVEAVLRAEQGGLMEPLGIRPDE
                     VALVTTGDGTCSQGEFWEAISNAVNLKAPVVFLVEDNGYAISTPSEVQYPGANVAALL
                     KGYEPHGLLILDDVDGCDPIASYEALQAAADHARARKGPALVRAKVIRPYSHSLSDDE
                     QLYKSRAQREAEALRDPVLTYAERLVAWGDLSPEQLQMLKEEVQAEIDAAWDEADAAP
                     RPESGSYYQHLYSEEVDPTSAAFDTEHASGDQATGAKTMLDLINATLKHEMARDPRIL
                     VFGEDVADASREEILGEVKGKGGVFKTTHGLQKLFGAHRVFNTPLAEATIIGRAIGLA
                     ARGFKPVVEIQFFDYIWPAMQQLRDELANIRWRSNGAFKSPMVVRVPIAGYLMGGATY
                     HSQCGESTFTHIPGLRVVCPSNALDAAGLLRTAIRCDDPVLFLEPKHLYRQTHNKGND
                     PGPDFMIPFGKARTVREGADLSVITYGNTVHRAVQAAREAEKEGISVEIIDLRTLNPY
                     DWAAIERTVKKTHRVIVAHEDTLSWGYGSEIAARIADELFFHLDAPVRRVAAKDTWVA
                     YYPALEDEILPQPKDFLEAYRKLAQI"
BASE COUNT          507 a         1058 c          980 g          472 t
ORIGIN      
        1 ccatgcccac gatgccgccg gagcagacct ccagacccgc ggcgcgcacg gcttgaatgg
       61 tctccagacg ctcgtcgaac ttgcgggtgt ggatgatggt ctcgtagaag tcgcggctgc
      121 tgtcgatgtt gtggttgtag acctggcagc cggcgccctt gagccgcttc gcctgggcct
      181 cgttgagcat gccgagggtg acgcagacct ccatgcccat gccggacacg ccgcgcacca
      241 tgtccagcac ggcgtcgaag ttggcgtcgt ccttcacctc gcgccaggcg gcgcccatgc
      301 agtagcgggt ggagccgttg gccttggcct cggcggcgcc cgccagcacc ttctccacat
      361 ccttgagggg ctccaccttc aggtccgtct ggtagcgggc gctctggggg cagtaggcgc
      421 agtcttcggg acaggcgccg gtcttgatgg aatccagcgt gcagaactgg atctcctcgg
      481 cgttccagtg ctgccggtgg gccgtggccg cccggtagag cagctcgggc acgggcagat
      541 cgtggagggc gcggatgtca gcggaggact tgggcatggg gactcgcaaa gcgcccattc
      601 tatccataag acccgggaag ccgttttatg gacccagccg tcacttattg atctgcggca
      661 gtctgtggcc agccccgggt gctgcccgtt cagggtccct gaaaccgggg atagacgggt
      721 ggtccggcgg ccgggcctcc cgtgctagat tgaagggctc cagatggctc agaacccctt
      781 gtgaggagtg cctttggccg ccaaccccga ccagccgacg cctgccaccg ccttgtcccg
      841 cgagcagcgc gtccgcctgt accgcaccat ctatgccgcc cgccgcatcg acgacaagga
      901 gatcacgggc aagcggcaga acaaggtctt cttccagatc aacggcgtgg gccatgaggc
      961 cgtgcaggcc gcggcggcca tggtgttccg tcccggccac gactggttct tcttctacta
     1021 ccgggaccgg gccctggcct acggcctggg ctacacggcc agggagatgt tcctgggctc
     1081 cgtgggcgcg gtggacgacc ccgccagcgg cggccgccag atgcccagcc actggggcca
     1141 caagggcctg aacatcttca ccacctccag ccccacgggc agccagttcc tccaggccgt
     1201 gggcgccgtc gaggccgtgc tgcgcgccga gcagggtggg ctgatggaac cgcttggcat
     1261 ccgccccgac gaagtggccc tggtcaccac gggggatggc acctgcagcc agggcgagtt
     1321 ctgggaggcc atcagcaatg ccgtgaacct gaaggccccg gtggtcttcc tggtggagga
     1381 caacggctac gccatcagca cgcccagcga ggtgcagtac cccggcgcca atgtggccgc
     1441 ccttttgaag ggctatgaac cccacggcct gttgatcctc gatgacgtgg atggctgcga
     1501 ccccatcgcc agctacgagg ccctgcaagc cgccgccgac cacgcccgtg cccggaaggg
     1561 cccggccctg gtgcgggcca aggtgatccg cccctacagc cattcgcttt ccgatgacga
     1621 acagctctac aaatccaggg cccagcgcga ggccgaggcc ctgcgggatc cggtgctgac
     1681 ctacgcggag cgcctggtgg cctggggcga cctgtctccc gagcagctgc agatgctgaa
     1741 ggaggaggtc caggccgaga tcgacgccgc ctgggacgag gccgacgccg cgccgcggcc
     1801 ggaatcggga agctactacc agcacctcta cagcgaagag gtggatccca cctccgcggc
     1861 cttcgatacg gaacacgcct ccggggacca ggccaccggc gccaagacga tgctggacct
     1921 catcaacgcg accctgaagc acgagatggc ccgggatccc cgcatcctcg tgtttggcga
     1981 ggacgtggcc gacgccagcc gcgaggagat cctgggcgag gtgaagggca agggcggcgt
     2041 cttcaagacc acccacggcc tccagaagct gttcggcgcc caccgcgtct tcaacacgcc
     2101 cctggcggag gccaccatca tcggccgggc catcggcctc gccgcccgcg gcttcaaacc
     2161 cgtggtggag atccagttct tcgactacat ctggcccgcc atgcagcagc tgcgcgacga
     2221 actggccaac atccgctggc gctccaacgg cgccttcaag agccccatgg tggtgcgggt
     2281 ccccatcgcc ggctacctca tgggcggcgc cacctaccac agccagtgcg gcgaaagcac
     2341 cttcacccac atccccgggc tgagggtggt ctgcccgagc aacgccctgg atgccgcggg
     2401 tctgctgcgc acggccatcc gctgtgacga cccggtgctc ttcctggagc ccaagcacct
     2461 ctaccggcag acccacaaca agggcaacga tccgggcccg gacttcatga tccccttcgg
     2521 caaggcccgc accgtgcgag agggcgcgga cctttccgtc atcacctacg gcaacacggt
     2581 gcaccgggcc gtgcaggccg cccgcgaggc ggagaaggag ggcatctccg tggagatcat
     2641 cgacctccgc acgctcaacc cctacgactg ggcggccatc gaacgcacgg tgaagaagac
     2701 ccatcgcgtg atcgtggccc atgaggacac gctgagctgg ggctacggca gcgagatcgc
     2761 cgcccgcatc gccgacgagc tgttcttcca cctggacgcc cccgtgcgtc gggtggccgc
     2821 caaggacacc tgggtggcct actacccggc cctggaggac gagatcctgc cccagcccaa
     2881 ggacttcctc gaggcctacc ggaagctcgc tcagatctga tttttcaggt ctgcggccaa
     2941 cgcggcgata ggatggactt ccccctggag gcgtcatgcg tgtcctgccg attgctctca
     3001 ccctctgcac cactgcg
//
LOCUS       DASUDT010000026         2716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_796780, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000026 DASUDT010000000
VERSION     DASUDT010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796780"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VFV26_00600"
     CDS             complement(<1..888)
                     /locus_tag="VFV26_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HEX4844683.1"
                     /translation="MEDETAASRAFLADLAPVEDAAWDEVHTTSGRRPRLSAEFWTSR
                     QRQAANLHEISYRACYKPQLPRHFIERLTLPGERVYDPFSGRGTTALEAALMGRRVAA
                     NDLNPLSRMLAEPRLTPPDPADVARRLAEIPRAGASDGLGLDMFFHPDTEAEIRGLRS
                     WCLDRAASGELDAVDAWIRMVATNRLTGHSPGFFSVYTLPPNQAVTADTQRQINAKRN
                     QTPTYRDTHTLILKKTRQLLAGLDALALRNLAEAAEDAQFLTGDARATPALEDGSVAL
                     TVTSPPFLDVVDYVGDNWLR"
     gene            931..>2716
                     /locus_tag="VFV26_00605"
     CDS             931..>2716
                     /locus_tag="VFV26_00605"
                     /inference="COORDINATES: protein motif:HMM:NF039586.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX4844684.1"
                     /translation="MNPAPKRHPELTRLYVAVGLGVVIIMIILAYKAVGTRIAEGGLD
                     APSRWALIALGLANVLAIGTLLFIVARSLAKLYFERRSGILGARLRTRLVLTLFIVGI
                     VPSLILYLVGRNFINKNVERWFSPETEVVIREGHKIAGDLRAAARARLAFGAARLLAS
                     PSAEAPAIREASGLDLVAFLGAKGEGVKALDLAPGLDPPDLTGLGSEAAQESRTGLWM
                     LRTVPRGDGQWAVGVFMPRETLDRVAALEQRFKESQQLRAARATLQTLPQNTFLFLTM
                     LTLFFAVWSGLALAKSLSEPIRALAKAAQRVGSGDLEVQLPEMGEDELAFLARTFNAM
                     TRDLRTSRAAIEAQASRIEQQRAYLGQILAALPVGVMSWRADGELRTFNAAARGWLGL
                     ESFDPSEARWSDVEALPRLGRLPELLAAVRESGRGAQEELRLGGEGEGRLVRAILEPL
                     QGGGVLAVLEDLSLLAQAEKRAAWQEVARRMAHEVKNPLTPIQLTAQRLLRRTREGRL
                     EPEAVQEGAETILAEVASLSRLVDSFSRFARLPVPQFAPCDPAELLRQVLALYEPNHP
                     GIRWSLRLAVAPQHVLWDGDMVKRALINL"
BASE COUNT          353 a          927 c         1039 g          397 t
ORIGIN      
        1 gcgcagccag ttgtctccca cgtagtcgac cacgtcgagg aaggggggcg aggtgacggt
       61 gagggccacg gagccgtctt ccagggccgg ggtggcccgg gcgtcgccgg tgaggaactg
      121 ggcgtcctcg gcggcctcgg ccaggttccg cagggccagg gcgtcgaggc ccgccagcag
      181 ctgccgggtc ttcttgagga tgagggtgtg ggtgtcccgg taggtggggg tctggttccg
      241 cttggcgttg atctgccgct gggtgtcggc ggtgacggcc tggttggggg gcagggtgta
      301 gacggagaag aagcccgggc tgtgccccgt gaggcggttg gtggccacca tgcggatcca
      361 ggcatcgact gcatccagct cgccgctggc cgcgcggtcc aggcaccagc tccgcagccc
      421 gcggatctcc gcttcggtat ccggatggaa gaacatgtcg aggccgaggc catccgaagc
      481 gcccgcgcgg gggatctccg ccaggcgccg ggccacgtcg gcggggtccg gcggggtgag
      541 ccggggttcg gccagcatgc gcgacagggg gttgaggtcg ttggcggcca cgcggcggcc
      601 catgagggcg gcctccaggg ccgtggtgcc ccggccgctg aagggatcgt agacccgctc
      661 gccgggcagg gtgaggcgct cgatgaagtg gcggggcagc tggggcttgt agcaggcccg
      721 gtacgagatc tcgtggaggt tggcggcctg ccgctggcgc gaggtccaga attcggcgga
      781 caggcgggga cggcgccctg acgtggtgtg gacctcgtcc caggccgcat cctccaccgg
      841 ggcgaggtcg gccaggaagg ccctgctcgc agctgtctcg tcctccatcc ctggcccttc
      901 ctcgaccatc caggatagcc tgctggagac atgaatcccg ctcccaagcg ccatcccgag
      961 ctgacgcgcc tctacgtggc cgtgggcctg ggcgtggtga tcatcatgat catcctggcc
     1021 tacaaggccg tggggacgcg catcgccgag ggcgggctgg acgcgccctc gcgctgggcc
     1081 ctcatcgccc tgggcctggc caacgtgctg gccatcggga ccctgctctt catcgtggcc
     1141 cgcagcctgg ccaagctcta tttcgagcgc cgcagcggca tcctgggggc ccggctgcgc
     1201 acccggctgg tgctcacgct gttcatcgtg ggcatcgtgc ccagcctgat cctctacctg
     1261 gtgggccgga acttcatcaa caagaacgtg gagcgctggt tcagcccgga aacggaagtg
     1321 gtgatccggg agggccacaa gatcgccggg gatctgcgcg ccgcggcgag ggcccgtctg
     1381 gccttcggtg ccgcgcggct gctggcctcg ccttcggcgg aggccccggc catccgggag
     1441 gcctcgggcc tggacctggt ggccttcctg ggggccaagg gcgagggcgt gaaggccctg
     1501 gacctggcgc cgggcctgga tccgccggat ctcacgggcc tgggctccga ggccgcccag
     1561 gaaagccgca cggggctgtg gatgctgcgc accgtgcccc ggggcgacgg ccaatgggcc
     1621 gtgggcgtct tcatgccgag ggagaccctg gaccgcgtgg cggcgctgga gcagcggttc
     1681 aaggagagcc agcagctgcg ggcggcccgg gccacgctgc agaccctgcc ccagaacacc
     1741 ttcctgttcc tgaccatgct caccctgttc ttcgccgtgt ggtcgggcct ggccctggcg
     1801 aaatccctca gcgagcccat ccgggccctg gccaaggccg cccagcgcgt gggcagcggc
     1861 gacctggagg tgcagctgcc ggagatgggc gaggacgaac tggccttcct ggcccgcacc
     1921 ttcaacgcca tgacccgcga cctgaggacg agccgcgcgg ccatcgaggc ccaggccagc
     1981 cgcatcgagc agcagcgggc ctacctgggg cagatcctgg cggccctgcc cgtgggcgtc
     2041 atgagctggc gcgcggacgg cgaactgcgc accttcaacg ccgcggccag gggctggctg
     2101 ggtctggaat ccttcgaccc ctccgaggcc cgctggtcgg atgtggaagc cctgccgcgc
     2161 ctgggccgcc tgcccgagct gctggccgcc gtgcgcgaat ccgggcgggg cgcccaggag
     2221 gagctgcgcc tgggcggcga aggggagggc cgcctggtgc gggccatcct cgaaccgctc
     2281 cagggcgggg gcgtgctggc ggtgctggag gacctgtccc tgctggccca ggccgagaag
     2341 cgcgccgcgt ggcaggaggt ggcccggcgc atggcccacg aggtgaagaa cccgctcacg
     2401 cccatccagc tcacggccca gcgcctgctg cgccgcaccc gggagggccg gctggagccc
     2461 gaggccgtgc aggagggcgc ggagaccatc ctggcggagg tggccagcct ctcccgcctg
     2521 gtggacagct tcagccgctt cgcccgcctg cccgtgcccc agttcgcgcc ctgcgatccg
     2581 gcggagctgc tgcgccaggt gctggccctc tacgagccga accatccggg catccgctgg
     2641 tccctccgcc tggcggtggc gccgcagcac gtgctgtggg acggcgacat ggtgaagcgg
     2701 gccctcatca acctgg
//
LOCUS       DASUDT010000027         3196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1194452, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000027 DASUDT010000000
VERSION     DASUDT010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194452"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1024)
                     /locus_tag="VFV26_00610"
     CDS             complement(<1..1024)
                     /locus_tag="VFV26_00610"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX4844685.1"
                     /translation="MNPLVQILGWALVHALWQGCLLVLLAVAGGAFLQGRARHALNGL
                     VLLLCLVLPAATAWHFHRPEPFGSGRGETEIQILEILPAARPSAAPSPLSLLVRLEAE
                     LQPHLPVLVALWALGAGFMALRLGGGYALSLRWKRQAVAAPGEWQSRLDALARRMDLR
                     RPVRLLLTGQGDTPMTLGLWRPAILLPATLLTSLPPAYLEALLAHELAHVRRLDYLAN
                     LLQGLAEVLLFFHPAVWWLSARIRAEREELSDQLAAQCLGDPRRLALALNALDDLQPA
                     LPRPFSLALAARGGHLLSRIEHLLSPRSAAKSPRGLLALLLIPCAVLALRATAPEPPP
                     IGAPAEV"
     gene            complement(1024..1395)
                     /locus_tag="VFV26_00615"
     CDS             complement(1024..1395)
                     /locus_tag="VFV26_00615"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX4844686.1"
                     /translation="MNRPLKPTEVELKLLRILWELGPASVKEVHARLNRQEEYAYTGV
                     LRMLQVMLEKGLVVRDESQRSHVYAPAHSRAAMEGGLVADLAERLFGGSAAALALAAL
                     QSGPVSAEEKARIRAMLGEDA"
     gene            complement(1630..>3196)
                     /locus_tag="VFV26_00620"
     CDS             complement(1630..>3196)
                     /locus_tag="VFV26_00620"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEX4844687.1"
                     /translation="IATLDSQLDRTYEAFQRKPDDMERYIYLSGLQDRNEVLFYRLLI
                     DHLDEMVPIVYTPTVGQACMQMSHIQRRYRGIYITPENIGNIDQVFRGLSQPQVNLIV
                     VTDGERILGLGDLGSDGMGIPVGKVSLYVAAGGVHPAVCLPVTLDVGTNNPRLLEDPL
                     YLGIRRPRLRGAEYEELVEKFVLGVKRNFPGALLQWEDFAKHTAFKNLDRYRERILSF
                     NDDIQGTGSTALAALMTAMRIKKSRFQDERYVIVGMGQAGTGIAMNIRAALKEEGLSD
                     EEARQRIFVVDMQGLLIEGDPLLEGPQMPLAQCRSAVEGWKLDDPSRIGLHDVVRNAH
                     PTVLIGVTAQPNLFDEAILAETAKHSERPIVLALSNPTHKCECSPEAVWKATDGKGLV
                     ATGSPFAPVSWKGRTLQASQCNNMYIFPGVGLGALVCKATRITDSMFLAASKAISAFV
                     TPEQEATGLLLPEMKDIRQVSAAVAKAVSKEARDAGLGRLLDDENLDAIIAKAQWEPH
                     YTAYRPGAPRQTD"
BASE COUNT          518 a         1053 c         1145 g          480 t
ORIGIN      
        1 ccacctcggc gggggcgccg atggggggcg gctccggggc cgtggcccgc agggcgagga
       61 ccgcacaggg gatcagcagg agagcgagca ggccccgggg ggatttcgcc gcggaccggg
      121 gggaaagcag gtgttcgatg cgggacagca aatggcctcc tcgggccgca agggccaggg
      181 aaaacgggcg tgggagagca ggctggaggt catccagcgc gttgagggcc agggccaggc
      241 gccgcggatc gcccaggcac tgggccgcca gctggtcgga gagttcctcg cgttcggccc
      301 ggatcctggc cgaaagccac cagacggcgg gatggaagaa gagcaggacc tcggccaggc
      361 cctggagcag gttcgccagg tagtccaggc ggcgtacgtg ggccagttca tgggccagga
      421 gcgcctccag gtaggcggga ggcaagctcg tgagcagggt cgccggaagc agaatcgcgg
      481 gtctccacaa ccccagggtc atgggggtgt cgccctgccc agtcagcagc agtcgcaccg
      541 gccgccggag atccatccgc cgggcgagcg catccagccg gctttgccac tcgccgggcg
      601 ccgccaccgc ctgccgtttc cagcgcaggc tgagggcata gcctccgccc aggcgcaggg
      661 ccatgaagcc ggcccccagg gcccagaggg ccaccaggac cggcaggtgg ggttgaagtt
      721 cggcctccag ccggaccagc agcgataggg gggagggggc cgccgaggga cgcgccgcag
      781 ggagaatctc caggatctgg atctccgtct ctcccctccc ggacccaaac ggttcggggc
      841 ggtggaaatg ccaggccgtg gcggctggca gcaccagaca gaggagcagg accaggccat
      901 tcaatgcatg gcgcgcgcga ccctgcagga aagcaccacc cgccaccgcc agcagcacca
      961 gaaggcagcc ctgccagagc gcatggacga gggcccagcc caggatctgg acgaggggat
     1021 tcatcacgcg tcctccccca gcatcgcccg gatgcgggcc ttctcctccg cgctgaccgg
     1081 accggactgg agggccgcca gcgccagcgc cgcggcggac cccccgaaca ggcgctcggc
     1141 caggtccgcc accaggcccc cctccatggc cgcccggctg tgggcgggcg catagacgtg
     1201 gctgcgctgg ctttcgtccc ggaccaccag ccctttttcc agcatgacct ggagcatccg
     1261 cagcacgccc gtataggcgt actcctcctg ccggttcaga cgggcatgga cctccttcac
     1321 cgaggccgga cccagctccc agaggatgcg caggagcttg agctccactt ccgtcggctt
     1381 gagggggcgg ttcatggggt tcctacacaa gatggtgtag acaattttgt gtagattcat
     1441 cccattgtca aggactcccg gacaacgaaa gggcaccccg aagggtgccc ggaggtctcg
     1501 gccacttgga tcgtgggccg gaaggggctg gcgaaaacgg tcgccccatg ggaggaaaga
     1561 gggtctcttc ccacccccag gctaggcctg ggccagcccc cctcaagggg taattcagtc
     1621 ccggcgccgt cagtcggtct ggcgcggcgc gccgggccga taggccgtgt aatggggctc
     1681 ccactgggcc ttggcgatga tggcgtccag gttctcgtcg tccagcaggc ggcccagacc
     1741 ggcatcccgt gcctccttgc tcacggcctt ggccacggcg gccgagacct ggcggatgtc
     1801 cttcatctcc ggcagcagca ggcctgtggc ctcctgctca ggggtgacga aggcgctgat
     1861 ggccttgctg gccgccagga acatgctgtc cgtgatccgg gtggccttgc agaccagggc
     1921 gccgaggccc acgcccggga agatgtacat gttgttgcac tgggaggcct gaagcgtccg
     1981 gcccttccac gacacgggcg cgaaggggct gcccgtggcc accaggccct tgccgtccgt
     2041 ggccttccag accgcctcag gcgagcactc gcacttgtgg gtggggttcg agagggccag
     2101 cacgatggga cgctcggagt gcttggcggt ctccgccagg atggcctcgt cgaagaggtt
     2161 cggctgggcg gtgacgccga tgagcaccgt gggatgcgcg ttgcgcacca catcgtgcag
     2221 gccgatgcgg gagggatcgt ccagcttcca gccctccacc gcggagcggc actgggccag
     2281 cggcatctgc ggcccttcca gcagcggatc accctcgatg agcaggccct gcatgtccac
     2341 gacgaagatg cgctggcggg cctcctcgtc ggagaggccc tcttccttca gcgcggcgcg
     2401 gatgttcatg gcgatgcccg tgccggcctg ccccatgccc acgatgacgt agcgttcgtc
     2461 ctggaagcgg ctcttcttga tgcgcatggc cgtcatgagc gccgccaggg ccgtggagcc
     2521 cgtgccctgg atgtcgtcgt tgaaggagag gatgcgctcg cggtagcggt ccaggttctt
     2581 gaaggccgtg tgcttggcga agtcctccca ctggagcagg gcaccgggga agttccgctt
     2641 cacgccgagc acgaacttct cgacgagctc ctcgtactcc gcgccccgga gccggggcct
     2701 gcggatgccc aggtagagag gatcctccag caggcggggg ttgttggtgc ccacgtccag
     2761 cgtgacgggc aggcacaccg cggggtggac gccgccggcc gcaacgtaga ggctcacctt
     2821 gcccacggga atgcccatgc catcggagcc caggtcgccc agccccagga tgcgctcgcc
     2881 gtcggtcacc acgatgaggt tgacctgggg ctgggagagc ccccggaaga cctggtcgat
     2941 gttcccgatg ttctccggcg tgatgtagat gccccggtag cgccgctgga tgtggctcat
     3001 ctgcatgcag gcctggccca cggtgggcgt gtagacgatg ggcaccatct cgtccaggtg
     3061 gtcgatcagg agccggtaga agagcacttc gttccggtcc tggaggccgg agaggtagat
     3121 gtagcgctcc atgtcgtccg gcttccgctg gaaggcctcg taggtgcggt ccagctggga
     3181 atccagggtc gcgatg
//
LOCUS       DASUDT010000028         3916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1393336, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000028 DASUDT010000000
VERSION     DASUDT010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393336"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2708
                     /locus_tag="VFV26_00625"
     CDS             <1..2708
                     /locus_tag="VFV26_00625"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: protein motif:HMM:NF016169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEX4844688.1"
                     /translation="SQMARAYHEGFRRLGSLRPVDLYVLNPCGEFWEDVRGPREAPPG
                     DDPYGLLLEEHLGLQRWGRPGRENVRLLNDLVDCDFEDQFREPEEETLLARLQSDLLH
                     RAPTVPEDPPLSVDGSLRVAACASPRREAEAVASAIWERVQADGLRFSDIAVIVPPSQ
                     KDAYLDHLRAAFEACHRLPWVAGDEGSRRLAALVDGAGRLLRLPLSDFTRAEVLSLLD
                     HPALAARHPDLAGDWAALCETLGVVRGLEGTGAPDSGDLWTWAMGARRLALGAVMPPG
                     ELDLDGRLSDPVPPPEQGGAFLARVEGLLADARRLRDQRLSPSAWALALGRFVGGHLG
                     DGEADAGPLARLQRALQGLEALEVPGLAAPLLPYAAVLDLALEALEGLRRDGATLGQG
                     VMVASYAPMRALPFQALFLMGLGEGVFPGQDVRNPLDLRSASRKPGDVSRAEQDRYLF
                     LESLLCARRHLHLSYVRRDAADGTELEPSPLLEDLRELVSALAGTDGWRALGWAPPVS
                     RHDPRAFDAAVPPEFNPDALREARAAEWGESLRAAGSDLEPVLSNLDMPPATHALLAA
                     LLRQVPPVEAGKEVAARLRISFGQLKAWLCDPLQGSTAVRLGLRGEDEAGEDAAEREE
                     EAFETPFLARRAWIQGAFWESLGGGDPAEALERGWRRGLATAQAPLGLFAQAERTRAQ
                     GALAGWRSLWSGEVPRVLRFGAPGIEALPAEDHEPFRWTFETPKGPVRVDLEGAAPPL
                     TADGFLLLSEQEPPAEGKPPKDADGRALLAAWVAHAALRARDLPSPGRVAVLSVHGGA
                     PARWTFPLPDWTPEQAGARLRSWCEDLLAGDPGPLPVEALLAGTQDPEGWIEKRRDQP
                     QAWFSSQGGPVPDAADLPVAPDWEARRDRRLGDFLRACRGEGEAP"
     gene            2705..>3916
                     /locus_tag="VFV26_00630"
     CDS             2705..>3916
                     /locus_tag="VFV26_00630"
                     /inference="COORDINATES: protein motif:HMM:NF024642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX4844689.1"
                     /translation="MNGPLLIPRPAVLDRIPHPFAVLEASAGTGKTFTIEHLVADRVL
                     AGVPLDRILVVTFTDKAALELRTRVRGLLERLLAHPGPEAPEGAPCWILDETARGRLK
                     QARASMERATLATIHSFCQHVLQESALERRSLFDQAQGDARQLFDRAWRELLRGDLAG
                     APALRGLLREALEAGWTVEKLGDQLWDVHRERAVCVPDVAAAEAHRQRFPPGIDPQEV
                     VAGWAAAKVNAATLRAAQARLGPFLALQERSAFGFASGLEDLGFDSLRKASSKEGLAG
                     AAAAFADWCLAFEPASPEAVLVQAFLGPVQARLEALKAAEGLFDFDDMILRVRDALAG
                     PDGEALAGRLRERFEVALIDECQDTDAAQWEIFRTLFHREGHELVLVGDPKQAIYGFR
                     GGDLPTYLAARD"
BASE COUNT          434 a         1418 c         1520 g          544 t
ORIGIN      
        1 tgtcgcagat ggcccgcgcc taccacgagg gcttccggcg cctgggctcg ctgcggcccg
       61 tggacctcta cgtgctgaac ccctgcggcg agttctggga ggacgtgcgc ggcccgcgcg
      121 aggcgccgcc cggggacgat ccctatggcc tcctgctgga ggagcacctg gggctccagc
      181 gctgggggcg ccccggccgc gagaacgtcc gcctgctgaa cgacctggtg gactgcgatt
      241 tcgaggacca gttccgggaa ccggaggagg agaccctgct ggcccgcctc cagtccgatc
      301 tgctgcaccg ggcgccgacc gtccccgagg atccgccgct gtccgtggac ggcagcctgc
      361 gcgtggccgc ctgcgccagt ccgcgccgcg aggccgaggc cgtcgcctcc gccatctggg
      421 aacgtgtgca ggccgacggg ctgcgcttct ccgacatcgc ggtgatcgtg ccgcccagcc
      481 agaaggacgc ctatctggat cacctgcggg cggccttcga ggcctgccac cgcctgccct
      541 gggtggccgg cgacgagggc agccgccgcc tggccgccct ggtggacggt gcggggcgcc
      601 tgctgcgcct ccccctgtcg gacttcaccc gggcggaggt gctgtccctg ctggaccatc
      661 ccgccctggc ggcccgccat ccggacctgg cgggggactg ggcggccctg tgcgagacgc
      721 tgggggtggt gcggggcctt gagggcaccg gcgccccgga ttccggcgac ctgtggacct
      781 gggccatggg ggcgcggcgc ctggccctgg gggccgtgat gccgccgggc gagctggatc
      841 tggatggccg gttgtcggat cccgtgccgc cgccggagca gggcggggcc ttcctggccc
      901 gcgtcgaggg cctgctggcg gacgcgcggc ggctgcggga ccagcgcctc tccccctcgg
      961 cctgggctct cgccctgggc cgtttcgtgg gcggccatct gggggacggc gaggccgacg
     1021 cgggtccgct ggcgcgtctg cagcgggccc tgcaggggct ggaggccctg gaggtgccgg
     1081 gcctggcggc gcctttgctg ccctatgccg ccgtgctgga cttggccctg gaggccctcg
     1141 aaggcctgcg tcgggatggc gccaccttgg gccagggcgt catggtggcc agctatgccc
     1201 ccatgcgggc cctgcccttc caggccctct tcctcatggg cctgggcgag ggcgtgttcc
     1261 cgggccagga cgtgcgcaac cccctggacc tgcgcagcgc aagccgcaag cccggcgacg
     1321 tctcccgcgc cgagcaggac cgctacctct tcctggagag cctgctctgc gcccggcgcc
     1381 acctgcacct gtcctacgtg cggcgggacg cggcggacgg cacggagctg gagccctcgc
     1441 ccctgctgga agacctgcgg gaactggtct cggccctggc ggggacggat ggctggcggg
     1501 ccctgggctg ggccccgccc gtgagccgcc acgatccgag ggccttcgat gcggccgtgc
     1561 cgccggagtt caacccggac gccctccgcg aagcgcgcgc tgccgaatgg ggtgaatctc
     1621 tgcgggcggc gggatcggat ctggagcccg tcctgtccaa cctcgatatg ccgcccgcga
     1681 cccacgccct tctggcggcg ctgctgcgcc aggttccgcc ggtggaggcg gggaaggagg
     1741 tcgccgcccg gctgcggatc agcttcggcc agctgaaggc ctggctctgc gatccccttc
     1801 agggcagcac cgccgtgcgc ctgggcctgc ggggcgagga cgaggctggc gaggatgcgg
     1861 cggaacgcga ggaggaggcc ttcgagacac ccttcctggc ccggcgggcc tggatccagg
     1921 gggccttctg ggagagcctc ggtggcgggg atcccgcgga ggccctggag cgtggctggc
     1981 gccgggggct ggccacggcc caggcgcccc tgggcctctt cgcccaggcg gagcggaccc
     2041 gggcccaggg tgcgctggcg ggctggaggt ccctctggtc cggcgaggtt ccgcgggtgc
     2101 tgcgcttcgg ggcgcccggc atcgaagcgc ttcccgcgga ggaccacgag cccttccgct
     2161 ggaccttcga aaccccgaaa ggccccgtcc gcgtggatct ggagggggcc gcgccgcccc
     2221 tgacggcaga tgggttcctg ctgctttccg agcaggagcc gcccgccgag ggaaagccgc
     2281 ccaaggatgc ggacggccgg gccctcctgg cggcctgggt ggcccatgcg gccctgcggg
     2341 cgcgggacct gcccagtccg ggccgggtgg cggtgctgag cgtccatggc ggcgcgccgg
     2401 cgcgttggac cttccctctg ccggactgga ccccggagca ggccggggcc cgccttcgca
     2461 gctggtgcga ggatctgctg gctggcgatc ccgggcccct gcccgtggag gccctgctgg
     2521 cggggacgca ggatccggaa ggatggatcg agaagcggcg ggaccagccc caggcgtggt
     2581 tctccagcca gggggggccg gttccggacg cggcggatct gcccgtggcg ccggactggg
     2641 aggcgcggcg ggaccgccgc ctgggggact tcctccgcgc ctgccgcggg gaaggggagg
     2701 cgccatgaac ggccccctcc tcatcccgcg ccccgccgtg ctggatcgca tcccgcaccc
     2761 cttcgccgtg ctggaggcca gcgcgggcac ggggaagacc ttcaccatcg agcacctggt
     2821 ggccgaccgg gtgctggcgg gtgtgcccct ggaccgcatc ctcgtcgtca ccttcacgga
     2881 caaggcggcc ctggagctgc gcacgcgcgt ccgcggcctg ctggagcgcc tgctcgcgca
     2941 tcccggcccg gaagcccccg agggcgcgcc ctgctggatc ctggacgaga cggcccgcgg
     3001 acggctgaag caggcccggg cctccatgga gcgggccacc ctcgccacca tccacagctt
     3061 ctgccagcac gtgctccagg agagcgccct ggagcgccgc agcctcttcg atcaggccca
     3121 gggcgatgcc cgccagctct tcgaccgcgc ctggcgggag ctgctgcggg gggacctggc
     3181 cggcgcgccg gccctgcgcg gcctcctgcg cgaagctctg gaggcgggct ggaccgtgga
     3241 gaagctgggc gatcagctct gggacgtcca tcgcgagcgg gccgtgtgcg tgccggatgt
     3301 ggcggcggcg gaggcccacc ggcagcgctt cccccctggg atcgaccccc aggaggtcgt
     3361 cgcgggctgg gccgcggcga aggtgaacgc cgccaccctc agggccgccc aggcccggct
     3421 ggggcccttc ctggcgctgc aggagcgcag cgccttcggc tttgcctcag gcctggagga
     3481 cctgggcttc gacagcctgc ggaaggcctc gtcgaaggag gggctggcgg gcgcggcggc
     3541 cgccttcgcg gactggtgcc tggccttcga gcccgcctcg ccggaggcgg tgctggtgca
     3601 ggccttcctg ggccccgtgc aggcgcggct ggaggccctg aaggcggccg agggcctctt
     3661 cgacttcgac gacatgatcc tgcgggtgcg ggacgcgctg gcgggtcccg atggagaggc
     3721 cctggccggg cggctccgcg agcgtttcga ggtggccctc atcgacgagt gccaggacac
     3781 ggacgcggcc cagtgggaga tcttccgcac cctgttccac cgcgagggcc acgagctggt
     3841 gctggtgggc gatcccaagc aggccatcta cggcttccgc gggggcgacc tgcccaccta
     3901 cctggcggcg cgggac
//
LOCUS       DASUDT010000029         4435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_576002, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000029 DASUDT010000000
VERSION     DASUDT010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4435
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576002"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="VFV26_00635"
     CDS             <1..924
                     /locus_tag="VFV26_00635"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4844690.1"
                     /translation="SHRPSLMWFTLAAIGGSLIKPCVVGTVARTTTPDTKSLGYSIYY
                     TLVNLGGALGPLLGLQVREGLGIEYVLVMSSATSVFNLLGTLVFFREPEGRPEDAPLR
                     SVSQVLKDMALVFANLRFMAFLVIFSGFWIMFWQIFYSLPFYLRDVLRFERFELIETV
                     YATAIIVLTVPVAALTKRVRPIVAMSTGFALATLGWLMLGAVPTLGATLVAMCVCAVG
                     EAMHAPRFYEYVADLAPKDQVGTYMGFAFLPVAIGALVAGYLSGFLVETFLKQSHRPS
                     LMWFTLAAIGGASTVLMLLYDRFVAPRKAEA"
     gene            complement(925..3087)
                     /locus_tag="VFV26_00640"
     CDS             complement(925..3087)
                     /locus_tag="VFV26_00640"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX4844691.1"
                     /translation="MSVRALLASLLFVPCLLGQDSRQLTLESIAHPTKRVAYAGTPST
                     RLDWLPDGALVQTKREGDQVALLRVDPLTWEAKPLLEAGPLQAALVAAGAPEPAAKAA
                     LGRGGFVWNEGRNAFLVDVAGDLFLVDVKAARARRLAGGKPDEPTFSPDGTQVAYLRG
                     NDLYRVDIATTRETRLTTGGSETVFNGRLDWVYQEEVYGRGSFRAFWWAPDSRRLAFL
                     SLDETKVPVHTLMDDRFQPQKALSARYPKAGDPNPIARLGIVDLTGTTVWMAEPYPGQ
                     ETLIVQVGWDPEGRLLAAHQDRVQSWLDLRRYEGAASNLLIRESGKAWQERLPLPRFL
                     PDGGFLWESGRTGRHHVYRYGKDARLIGAVTAGDWDVRQVHGVDVRGRSLYFDATERS
                     PIGQDTYRIGLDGQGLARLTERPGIHRVRFNGTFTAFLDTWSDIQTPPQQALHDGAGK
                     LIRLIDANPSEKLKALKLGRVSFQQVKTRDGFPMETLLVMPVDFDPAKKYPVFQYIYG
                     GPASPMVRNAWSRDMLWFQFLAQQGIATWICDNRSASGKGLASAQGIHRNLGAQELQD
                     LLDGHLWLKEQGWADMDRLCLDGWSYGGYMTTYALTHSKAWKLGIAGAPVVDWSLYDS
                     IYTERYMGLPADNKAGYESSSVLKAAKDLSGRLLLLHGTLDDNVHPQNSVMLIDALQK
                     AGHPVQIVPLPGSDHSPRAPQHHWARHQAMWDFISKYL"
     gene            complement(3142..3981)
                     /locus_tag="VFV26_00645"
     CDS             complement(3142..3981)
                     /locus_tag="VFV26_00645"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4844692.1"
                     /translation="MPENQLVLSYILGLTVLLALGGLALFSLAHAKNRIIREQRRALE
                     AEQRLRRTQEAFTDNAHHELRTPVQVLAGHLQMLRDLDPTAQQAAVLARAQEAAARLD
                     HLVQGLLDLASLAQDTLALHPALTDLGAHLAHLGKSIEARAGAKGLEPRVALDPLPRP
                     LTGDAARLCQALEALVDNALGFTERGAVTFRMTARPEDRAWHLRFEIEDQGPGLPPDW
                     ARLLRPFEQEEQSFRRRRGGLGIGLPLAAGIIDLMGGRMGLEPLATGTLAWVEIRLEE
                     AES"
     gene            complement(3957..>4435)
                     /locus_tag="VFV26_00650"
     CDS             complement(3957..>4435)
                     /locus_tag="VFV26_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844693.1"
                     /translation="HIHNAWLADLAFVLQTLMSLWVLSDLGPNPFPVSILALVGVMIL
                     ATAGWDATSVGLKAKWTTGMAMASLVLLGLSIWRLKGFLQPKGETLYQEPAFWLLGTW
                     TLDHGTLLIFYPLADAFIRHLSPAWVQIPWLVNYLVGLLLNITLARTFLCRKTNSY"
BASE COUNT          661 a         1450 c         1578 g          746 t
ORIGIN      
        1 tcccaccgcc ccagcctgat gtggttcacg ctggccgcca tcggcggatc cctcatcaag
       61 ccctgcgtgg tggggaccgt ggcccggacc accacgccgg acacgaagtc cctggggtat
      121 tccatctact acaccctggt caacctgggc ggcgcgctgg gtcccctgct gggcctgcag
      181 gtgcgggagg gcctcggcat cgagtacgtg ctggtgatgt cttcggccac ctcggtcttc
      241 aacctcctgg gcaccctggt cttcttccgg gaacctgagg gcaggccgga ggatgccccc
      301 ctccgcagcg tttcccaggt gctgaaggac atggccctcg tcttcgccaa cctgcgcttc
      361 atggccttcc tggtgatctt ctcgggcttc tggatcatgt tctggcagat cttctacagc
      421 ctgcccttct acctccggga cgtcctccgc ttcgagcggt tcgagctcat cgagacggtc
      481 tacgccacgg ccatcatcgt gctcacagtg cccgtggcgg ccctcaccaa gcgggtgagg
      541 cccatcgtcg ccatgtccac cggattcgcc ctggccacct tgggatggct gatgctcggg
      601 gccgttccga ccctgggggc caccctggtg gccatgtgcg tctgcgccgt gggcgaggcc
      661 atgcacgctc cccggttcta cgagtacgtg gccgatctgg ccccgaagga ccaggtcggc
      721 acctacatgg gcttcgcctt cctcccggtg gccatcggag ccctggtggc gggctacctc
      781 agcggcttcc tggtggagac cttcctgaag cagtcccacc gccccagcct gatgtggttc
      841 acgctggccg ccatcggcgg cgcctccacg gtgctgatgc tcctctacga ccgcttcgtg
      901 gcgccgcgca aggcggaagc ctgatcagag gtacttcgag atgaagtccc acatggcctg
      961 atggcgcgcc cagtggtgct ggggcgcccg cgggctgtgg tcggatcccg ggaggggcac
     1021 gatctggacg gggtgtccgg ccttctggag ggcgtcgatg agcatgacgc tgttctgcgg
     1081 gtgcacgttg tcgtccaggg tgccgtgcag cagcagcagg cggccggaga ggtccttggc
     1141 ggccttcagc acggaactgg attcgtagcc ggccttgttg tccgcgggca ggcccatgta
     1201 gcgctcggtg tagatgctgt cgtagaggct ccagtccacc acgggcgccc cggcgatgcc
     1261 cagcttccag gccttgctgt gggtgagggc ataggtggtc atgtagccgc cgtagctcca
     1321 gccgtccagg cagaggcggt ccatgtccgc ccagccctgc tccttcagcc agaggtgccc
     1381 gtccagcagg tcctggagct cctgggcgcc caggttgcgg tggatgccct gggcgctggc
     1441 caggcccttg cccgaggcgc tgcggttgtc gcagatccag gtggcgatgc cctgctgggc
     1501 caggaactgg aaccagagca tgtcccggct ccaggcattg cgcaccatgg gggaggcggg
     1561 cccgccgtag atgtactgga agaccgggta tttcttcgcc ggatcgaagt ccacgggcat
     1621 caccagcagg gtctccatgg ggaagccgtc acgggtcttc acctgctgga agctcaccct
     1681 gccgagcttc agggccttca gcttctcgct gggattggcg tcgatgagcc ggatgagctt
     1741 tccggcgcca tcgtggaggg cctgctgggg cggcgtctgg atgtcgctcc aggtgtccag
     1801 aaaggctgtg aaggtgccgt tgaagcggac gcggtggatc ccggggcgct ccgtcagccg
     1861 agccaggccc tggccgtcga ggccgatgcg gtaggtgtcc tggccgatgg ggctgcgctc
     1921 cgtggcgtcg aagtagaggc tgcggccacg gacgtccacg ccgtgcacct gccgcacatc
     1981 ccagtccccg gcggtgacgg cgccgatcag gcgggcatcc ttcccgtagc ggtagacgtg
     2041 gtggcggccc gtgcgcccgg attcccagag gaacccgccg tccggaagga agcggggcag
     2101 gggcagccgt tcctgccagg cctttccgct ttcgcggatg agcaggttgg aggcggcgcc
     2161 ttcgtagcgg cgcagatcca gccagctctg cacgcggtcc tggtgggcgg ccagcaggcg
     2221 gccttcgggg tcccagccca cctggacgat gagggtctcc tggcccgggt agggctcggc
     2281 catccaaacg gtggtcccgg tgaggtccac gatgcccagc cgggcgatgg ggttgggatc
     2341 gccggccttg gggtagcggg cggagagggc cttctggggc tggaagcggt cgtccatgag
     2401 cgtgtggacc ggcaccttgg tctcgtccag gctgaggaag gccaggcgcc tggaatccgg
     2461 cgcccaccag aaggcgcgga agctgccgcg gccgtagacc tcctcctggt agacccagtc
     2521 caggcggccg ttgaacacgg tctcgctgcc gccggtggtg aggcgggtct cccgggtggt
     2581 ggcgatgtcc acccggtaga ggtcgttgcc gcgcaggtag gccacctggg tgccatcggg
     2641 gctgaaggtg ggctcgtccg gtttgccgcc cgcaaggcgc ctggccctgg cggccttcac
     2701 atccaccagg aagaggtccc cggccacgtc caccaggaat gcgttgcgcc cctcgttcca
     2761 gacgaagccc ccgcgcccca gggcggcctt ggccgcgggt tccggggccc cggccgccac
     2821 cagggccgcc tgcagggggc ccgcctcgag gaggggcttc gcctcccagg tgagggggtc
     2881 cacgcgcagg agggccacct ggtccccctc gcgcttcgtc tgcaccaggg ccccgtcggg
     2941 cagccagtcc aggcgcgtgg aaggcgtgcc tgcataggcc acgcgcttcg tgggatgggc
     3001 gatggattcg agggtgagtt gacggctgtc ctggcccagc aggcagggga cgaacagcag
     3061 gctggccagg agggcgcgga cggacatgga ggctccgggg gaccctctag gtatatcgca
     3121 aagcgaggct caccagcagg ctcagctttc cgcttcctcc agccgtatct ccacccaggc
     3181 cagggtgccg gtggcgaggg gctcgagccc catccggccg cccatcaggt cgatgatccc
     3241 cgcagccaag ggcaggccga tgccgaggcc gccccggcgg cggcggaagc tctgctcctc
     3301 ctgttcgaag gggcgcagca gccgcgccca gtccggcggc aggcccggcc cctggtcctc
     3361 aatctcgaag cgcagatgcc aggcgcggtc ctcgggccgg gccgtcatgc ggaaagtgac
     3421 ggcgccgcgt tcggtgaaac ccagggcgtt gtccaccagg gcttccaggg cctggcaaag
     3481 gcgggcggca tcgccggtca ggggccgggg caggggatcc agggccacgc ggggttccag
     3541 gcctttggcc ccggcgcgcg cctcgatgct tttcccgaga tgggccaggt gcgcgccgag
     3601 atccgtcagg gcagggtgga gggcgagggt gtcctgggcc aggctggcca ggtcgagcag
     3661 accctgcacc agatggtcca gtcgcgccgc agcctcctga gcccgggcga ggaccgccgc
     3721 ctgctgcgcc gtgggatcca ggtcccgcag catctgcagg tgccccgcca gcacctgcac
     3781 gggcgtgcga agctcgtggt gcgcattgtc cgtgaacgcc tcctgcgtgc gtcgaagccg
     3841 ctgctccgcc tccagagccc gccgctgctc gcggatgatg cggttcttcg cgtgagctag
     3901 gctgaatagc gcaagcccgc cgagagccag caggacggtg aggccgagaa tgtagctcag
     3961 tacgagttgg ttttccggca caggaaggtc cgagcaagag tgatgtttag aagcagtcct
     4021 accaggtagt ttacaagcca cgggatctgg acccaggccg gggaaaggtg gcggatgaac
     4081 gcatcagcaa ggggatagaa aatcagcagg gttccgtggt cgagcgtcca ggtccctaga
     4141 agccagaaag caggctcttg atagagcgtt tcccctttcg gctggaggaa gcccttgagc
     4201 ctccagatac tgagtccgag gaggacaaga ctggccatgg ccatacccgt ggtccacttg
     4261 gctttcaggc cgaccgaggt cgcgtcccac ccggcggtgg ccaggatcat cacgccaacc
     4321 aaggcgagga tggaaacggg gaatggatta ggccccaggt ctgacaggac ccacagggac
     4381 atcagtgtct ggaggacgaa ggcgagatcc gccagccacg cattatggat gtggc
//
LOCUS       DASUDT010000030         9735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_818998, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000030 DASUDT010000000
VERSION     DASUDT010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9735
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818998"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VFV26_00655"
     CDS             complement(<1..181)
                     /locus_tag="VFV26_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844694.1"
                     /translation="MFRGIHNLGRTLALVTLGSSLLLAQEKGIGADFKLRAGYGLSTN
                     DNLNSTLLGLGLNLRY"
     gene            complement(463..1470)
                     /locus_tag="VFV26_00660"
     CDS             complement(463..1470)
                     /locus_tag="VFV26_00660"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX4844695.1"
                     /translation="MRKILLLHTGGTLGMAPSGKPASLAPGPFLDHLLEQVPELGQLA
                     DLSVEVPFNQDSACLEPSHILALADRVRASAHDFDGFVIIHGTDTMAFTASCLGFLLA
                     DLGKPVVLTGSQRPLAFVRSDARSNLVNAVDLACRGLPEVGICFGTHWIRGVAADKLS
                     VHQFEAFQSPNLPPLAELGAEIRLHPEVGQFIRRVPEGLGARLDLAIHTVTPHPGMAW
                     SLAPEGARAVLIQAFGAGNLPTGRADLQAALADAARRRLPVVVISQCPYGGVDLSAYE
                     LGRMVEGLGAISGGLHTRWAALAKLGLVLGAGGGLVEAQAAFASQWAGEPMPDGAWSQ
                     A"
     gene            1552..2472
                     /locus_tag="VFV26_00665"
     CDS             1552..2472
                     /locus_tag="VFV26_00665"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family protein"
                     /protein_id="HEX4844696.1"
                     /translation="MRRIPRYLQLLADRYLRRLLRNRLTGHQLQAAVETALATLPIQE
                     NLLVREGALRSEALNRQLAWAMAFVAGAVNAGGFLAVSHYTSHMTGVVSAMADELAVG
                     DLVTALAALAMMLSFLGGAFVCALLISFGQRRRMRSRYALTLVLEALLMLVFGFMGNR
                     LQQEIQFTLPSTVMLLCFIMGMHNAVTSIISGAAVRTTHLTGTVTDIGIELGRLAYVN
                     VHHRQGRDRILANRQKLSLFLLILASFLAGGVIGALGFKHIGFKVTVPLAGFLCFLAA
                     RPLILEVRLLMHRLRRQWTPDHPVPPDVRP"
     gene            complement(2475..3323)
                     /locus_tag="VFV26_00670"
     CDS             complement(2475..3323)
                     /locus_tag="VFV26_00670"
                     /inference="COORDINATES: protein motif:HMM:NF014646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX4844697.1"
                     /translation="MAKVEPDLLSIGDICSETGLSADVVRVWERRYGFPVPVRLPSGH
                     RRYRQDDLYRLRLMAEAVAQGHRPSVVARSTEEALKRLLVPAGDPRVEALFAAASAMD
                     TGHMRALLREALGGLGWRPFLQQVVSPLLDRVGMAWAEGSLGVHQEHLVSEVLEDFLR
                     ELRLGCQPLPGKGAVLLATLPGERHRLGLLMAALAYAATGTRAELLGVDLPVASIAQA
                     ARTLKVDRVAVGLSVQGAGETSRRLLLDLKERLPPGCRLLIGGQGAARTRRIEGVDRM
                     VGLEVA"
     gene            complement(3399..4043)
                     /locus_tag="VFV26_00675"
     CDS             complement(3399..4043)
                     /locus_tag="VFV26_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844698.1"
                     /translation="MITGYNTDVRHGNRVYHVQTEDKGLTNPKIETLIYVGGEILDNY
                     RSSYEDLLAAPPVGETAIQSRMDEQHRAVIRDIKNGKYDQTPPDLLEQQAFNDRPLDQ
                     AILEFLQQEGDVETLELVLDQPLKPAFGETFRVQVRARLCQSQSPVPDAEVTVKLLSS
                     LKKATSLLSGRTDREGRFAGEVQLPPSQPGQCAVLVSCASDQGLDELKAAVVAL"
     gene            complement(4086..5339)
                     /locus_tag="VFV26_00680"
     CDS             complement(4086..5339)
                     /locus_tag="VFV26_00680"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844699.1"
                     /translation="MPRLLLVDDNPSIHRIAESLLAPTDVELVCVDSAAEALDRIGQG
                     DRFDVILVDTAMPGMDGWTLLTRLREMEATAHLPIALMAGVLDPVDPAKLAKAPVQGF
                     LKKPIELRELGDRVKALLAMPVVVASEPSAFTTVPATPAKDLVRMAEASLPEFRPDYP
                     PMPEAVELPPFSPEPPSLAAFGAEPEHDLLALTAEDLWPEEAAEAAALPPAFESSAAP
                     EVRLELEELDLESLQDLASGAMPAAPHSMDHLDAPMPGDIYELPDMEALAPEVEIEPP
                     APAFQAPATERPEAEAPLAEALGEESLLSFPDLEGLDGLPGEVEPAPAAAASAAPWVM
                     PAVVPAVEIEVAREIPEPVPAASGQAPAASGQAPLTPEQIQALLGDPALMEALTKAVV
                     TRMSDQAIREIAWEVMPDLAGRLQR"
     gene            complement(5448..6752)
                     /locus_tag="VFV26_00685"
     CDS             complement(5448..6752)
                     /locus_tag="VFV26_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844700.1"
                     /translation="MIPQRYIIATLFIAAMLLLFAVVQAPRPVSAGGVAAVETPAIMN
                     LGGYETMAELRMEDGWAPRFQGTQDPDQSEAWPFEGGFGTPWEPASPYLGDQGLAMNG
                     PGGRSEVVLWKGLEWRRYRFDAPLCSARLDPLKGNRLLVTLQMGSTRFETRLLEVPEG
                     RVIWSTQSGPWSRFSWDGKAALLGFFEKPEGRGEPSLLLSALPLDSDLGEATLAAWDE
                     PGLPPPLRGVATKRESLSDDGRDLPGPRLDLPWRSGDRLWFPRADRLWHGGAQGWTAW
                     FLEGGSWRRRAAGPGFLTAHPPQRMALAAPLPEEGMVRRTSPVAAVEWAPVAEDSLPW
                     PAWDAAWAWRENGAFDAWDQRWNESALPPERQRQALFEAYRPEWRTALNLRASVKGWL
                     PKGPEVAMREPSGAAWIWVGDRVLLVRLVDVERVRALKRLLR"
     gene            6779..7327
                     /locus_tag="VFV26_00690"
     CDS             6779..7327
                     /locus_tag="VFV26_00690"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class IV adenylate cyclase"
                     /protein_id="HEX4844701.1"
                     /translation="MTDRRRAAMKHKPAVETELKLRIPATGPYRPLLEALGFREAIPA
                     QSEISLLWDRNGELRTAGSALRTRRFAGAFRLTWKGPKVPDPILKIRPEHETGIEDGE
                     ALEAILRALGYAPVLRMEKVRAVWERAELEACLDETPFGCYLELEGEPQAIRAAMEGL
                     GHAPGRAEPRSYPELYQAHGLG"
     gene            complement(7449..8603)
                     /locus_tag="VFV26_00695"
     CDS             complement(7449..8603)
                     /locus_tag="VFV26_00695"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HEX4844702.1"
                     /translation="MNPEGRFDTRCIHAGQSPDPNNGAIMTPVYFTSTYVQEGIGQNK
                     GFDYARVRNPTRDALEGNLAALEGGAHGMAFGSGMAAVQAIFEQLSSGDHVVLGDNVY
                     GGTFRLLDKVMTRFGLTYTQVETGDLAAFKAALRPNTKLVMLETPTNPMLGLTDIPGI
                     RQVMTLMGSKAVLAVDNTFATPYNQRPLELGADLVFHSTTKYLNGHSDSIGGIAITNR
                     EDIAEGLRFHQKAAGGILSPMESWLILRGTKTLHLRMERHNQSALQIARWLEARKDLK
                     AVYYPGLESHPQHALAKQQMKGFSGIVSFDTGDAERTRRMASSFKVFSLAESLGGVES
                     LVCHPASMTHGSVPEADRQRLGINDNLLRLSVGVEDVQDLIEDLEQVLKV"
     gene            8646..9059
                     /locus_tag="VFV26_00700"
     CDS             8646..9059
                     /locus_tag="VFV26_00700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844703.1"
                     /translation="MRKSIASVSMALALLACRSDKPEDQVRRAFETCVAAVEAGDAAA
                     ATEPLDAAFRGPEGMDKPGARLFLMGLLRQEKVGVAVIRNDVALRGNEAFQDVDLILT
                     GRSGGLLPQDASRRAFSLRWRKAGGDWKLVAIEER"
     gene            complement(9063..>9735)
                     /locus_tag="VFV26_00705"
     CDS             complement(9063..>9735)
                     /locus_tag="VFV26_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844704.1"
                     /translation="GASPGTVIYRLLHETPPPLPPAACREISRDVQVVLNRAIAKDPA
                     SRFQSAEELGAALRSAQDSAWRWEPDRPTVAVPARRPTAKALTPPGPRWGLPAVPLAA
                     EAPIPVRKPAPGRPPAAQADAGATGRAEVRKDILETTRRQLLQAIEIDPDNARAHAML
                     LATHYQLGWMDAVMQTLRLARSRGIPAAELRAVPRCEQLLSEEEQACRLPLDLHSEFM
                     AYLGS"
BASE COUNT         1508 a         3350 c         3396 g         1481 t
ORIGIN      
        1 cgtaccgcag gttcaggccg agccccagga gtgtgctgtt gaggttgtcg ttcgtgctga
       61 ggccgtaccc ggcccgcagc ttgaaatcag ccccgattcc cttctcctgg gccagaagca
      121 acgaagaacc gagggtgacg agggccaggg ttcggcccag gttatggatt ccacgaaaca
      181 tggtgggtac tcctaacaat gatcgcggcc ttgccgcggg ggggggagag aaacaaaaca
      241 ggtggcgccg agcccttggg ggtggtgatc cacgaggaaa tcgccgtgcc atgcggtttt
      301 ggtgaggggg gctgagaaag agccaggttg aacggtggaa accataccac aactcttgag
      361 acattcccga tcgattcact tttttcggga accatccgtt cgctgcgcgc atttacagtg
      421 gcttgcccac cgcaacaatc ccgtcagggg agactccccc catcacgcct gggaccacgc
      481 cccgtccggc atgggctctc cggcccactg ggatgcgaaa gccgcctgcg cttctaccag
      541 gccgcccccg gcgcccagca ccaggcccag cttggcgagg gcggcccagc gggtgtgcag
      601 gcctccggag atggcgccca ggccctccac catccggccc agctcgtagg cggagaggtc
      661 gacgccgcca taggggcact gggaaatcac caccaccggc agccgccgcc gcgcagcatc
      721 ggccagggcc gcctgaaggt ccgcccggcc cgtgggcagg ttgccggccc cgaaggcctg
      781 gatcagcacg gctctggcgc cctcgggcgc gaggctccag gccatgcccg ggtggggtgt
      841 caccgtgtgg atggcgaggt cgagccgggc gcccaggccc tcgggcaccc ggcggatgaa
      901 ctggcccacc tcggggtgca ggcggatctc ggcgcccagt tccgccaggg gcggcaggtt
      961 ggggctctgg aaggcttcga actggtggac gctcagcttg tccgcagcca cgccgcggat
     1021 ccagtgggtg ccgaagcaga tgcccacttc ggggaggccg cggcaggcca ggtccacggc
     1081 gttcaccagg ttgctgcggg catcgctgcg cacgaaggcc agggggcgct ggctgcccgt
     1141 gagcaccacg ggcttgccca ggtccgccag gaggaagccc aggcaggacg cggtgaaggc
     1201 catggtgtcc gtgccatgga tgatgacgaa gccgtcgaag tcgtgggcgg aagcccgcac
     1261 gcggtccgcc agggccagga tgtgggacgg ttccaggcag gcggaatcct ggttgaaggg
     1321 cacctccacg gaaagatccg ccagctgccc cagttcggga acctgttcga gcaggtggtc
     1381 caggaagggc ccgggcgcca aggaggcggg tttcccgctg ggggccatgc ccagtgtgcc
     1441 gccggtgtgg aggaggagga tcttccgcat ggaaggagtc taccgtctgg ccttcaaagt
     1501 ccgcctctgg tctctcaccg cccgcccggg ccagtagact gaaggttccc gatgcgccgc
     1561 attccccggt atctccagct gctcgccgac cgctacctcc ggcggctgct gaggaaccgc
     1621 ctcacgggcc accagctgca ggccgccgtg gagacggccc tggccaccct gcccatccag
     1681 gagaacctgc tggtgcggga gggggccctg cgctccgaag ccctgaaccg ccagctggcc
     1741 tgggccatgg ccttcgtggc cggggccgtg aacgcaggcg ggttcctggc cgtcagccac
     1801 tacacctcgc acatgaccgg cgtggtgtcc gccatggccg atgaactggc ggtgggggac
     1861 ctcgtcacgg ccctggcggc cctggccatg atgctcagct tcctgggggg ggccttcgtc
     1921 tgcgccctgc tgatcagctt cggccagcgg cggcgcatgc gcagccgcta tgccctgacc
     1981 ctggtcctcg aggcgctgct gatgctggtc ttcgggttca tgggaaaccg cctgcagcag
     2041 gagatccagt tcaccctgcc cagcaccgtg atgctgctct gcttcatcat gggcatgcac
     2101 aacgccgtga cctccatcat ctccggcgcc gcggtccgga ccacccatct cacgggcacg
     2161 gtcacggaca tcggcatcga actgggacgc ctggcctacg tgaacgtcca ccaccggcag
     2221 gggcgggacc gcatcctcgc caaccgccag aagctctccc tgttcctcct gatcctggcc
     2281 tccttcctgg ccggcggcgt gatcggggcc ctggggttca agcacatcgg cttcaaggtc
     2341 accgtgcccc tggccgggtt cctgtgcttc ctcgcggccc gccccctgat cctggaggtg
     2401 cgcctgctga tgcatcgcct gcggcggcag tggacccccg atcatccggt cccacccgac
     2461 gtccgcccat agcgctaggc cacctccagc cccaccatcc ggtccacgcc ttcgatccgc
     2521 cgcgtccggg ccgcgccctg gcccccgatg agcagccggc agcccggggg aaggcgctcc
     2581 ttcaggtcca ggagcaggcg ccgcgatgtc tctccggcgc cctggaccga aaggcccacg
     2641 gccacccggt ccaccttcag cgtgcgcgcc gcctgggcga tgctggccac gggcagatcc
     2701 acgcccagca gttccgcgcg ggtgcccgtg gccgcgtagg ccagggccgc catcaggagg
     2761 cccagccggt gccgttcgcc gggaagggtg gccaacagga cggcgccttt cccggggagg
     2821 ggctggcagc ccagccgcag ctcccgcagg aagtcctcca gcacctccga taccagatgt
     2881 tcctgatgga cccccaggct gccttcggcc caggccatgc ccacccggtc cagcagaggg
     2941 gacaccacct gctggaggaa gggccgccag cccagcccgc ccagcgcctc ccgcagcagg
     3001 gcccgcatgt gcccggtatc catggccgaa gccgccgcga acagggcctc cacccgggga
     3061 tccccggcgg gcaccagcag ccgcttcagg gcttcttcgg tggatcgcgc caccaccgag
     3121 ggccgatggc cctgggccac cgcctcggcc atgagccgga gccggtagag gtcgtcctgg
     3181 cggtagcgcc ggtggcccga gggcaggcgg accggcaccg gaaacccgta gcggcgctcc
     3241 cacacccgca ccacatccgc ggaaagaccg gtttccgaac agatgtcgcc gatgctcagc
     3301 agatccggtt ccaccttggc catggccacc tccaggacga cgtcctggca tgaagatcca
     3361 tccaatggga cgcaaagtcg agattattat ctagccaatt acagggccac cacggctgcc
     3421 ttgagctcat caagcccctg gtccgaggca cagctcacca gcaccgcgca ctggcccggc
     3481 tggctgggtg gaagctggac ttccccggca aagcggcctt cccggtccgt gcgcccggac
     3541 agcaggctgg tggccttctt caggctggac aggagcttca ccgtgacctc agcatccggt
     3601 accgggctct ggctctggca gaggcgggcc cgcacctgca cccggaaggt ctccccgaag
     3661 gcgggcttca agggctggtc cagcaccagt tccagggttt cgacatcccc ctcctgctgg
     3721 aggaactcca ggatggcctg gtccaggggg cggtcgttga aggcctgctg ctccagcagg
     3781 tccggcggcg tctggtcgta cttcccgttc ttgatgtccc ggatgaccgc ccggtgctgc
     3841 tcatccatgc ggctctggat cgcggtctcg cccaccgggg gggcggccag cagatcctcg
     3901 taggaggagc ggtagttgtc gagaatctcg ccgcccacat agatgagcgt ttcgatcttg
     3961 ggattcgtca gccccttgtc ctcggtctgg acgtggtaga cgcggttccc gtggcggaca
     4021 tcggtgttgt agccagtgat catgggaagc gtccgggaaa cgggaagaca gggcgggtca
     4081 tgaacctacc tctgcaatct tcccgccaga tcgggcatga cttcccaggc gatctcccgg
     4141 atggcctgat cgctcatgcg ggtcaccacc gccttcgtca gggcctccat cagggcgggg
     4201 tcccccagaa gagcctggat ctgctcgggc gtgagagggg cctgaccgga cgcggcaggg
     4261 gcctgaccgg acgcggcagg caccggctcc gggatctccc gggccacctc gatctccacg
     4321 gcaggcacca cggcaggcat cacccagggg gccgcggatg ctgccgccgc tggcgcgggt
     4381 tcgacctcac ccggaagccc atcgagaccc tccagatccg ggaaggagag caggctttcc
     4441 tcgcccaggg cctcggccag gggtgcttcc gcctcaggac gttcggtggc aggtgcctgg
     4501 aaagccgggg ccgggggctc gatctcaacc tcgggcgcca gggcctccat gtcgggaagc
     4561 tcgtagatgt ccccgggcat cggggcatcc aggtgatcca tggagtgggg cgcggccggc
     4621 atggctccgg aggccagatc ctgaaggctc tccagatcca gttcctccag ttcgaggcgc
     4681 acttccggcg cggcactgga ttcgaaggcg gggggaaggg ccgcggcctc ggcggcctct
     4741 tcgggccaga ggtcttccgc cgtgagcgcc agcaggtcat gttccggctc ggccccgaag
     4801 gcggccaggg acggcggctc cggggagaag gggggcagct ccaccgcttc gggcatgggc
     4861 ggatagtccg gccggaactc cggcagcgaa gcctcggcca tcctcaccag atccttggcc
     4921 ggcgtggccg gcaccgtggt gaaggccgag ggctcggagg ccaccaccac cggcatggcc
     4981 agcagggcct tcacgcggtc gcccagctcg cggagttcga tgggcttctt caggaacccc
     5041 tgcacaggcg ccttggccag cttggccggg tccacgggat ccagcacccc ggccatcagg
     5101 gcgatgggaa ggtgggccgt ggcctccatc tcccgcaggc gggtcagcag ggtccagcca
     5161 tccatgccgg gcatggccgt atccaccagg atgacgtcga agcgatcccc ctgcccgatc
     5221 cggtccaggg cctccgcggc ggaatcgaca cagaccagtt ccacatccgt gggagccagc
     5281 agggattcgg cgatgcggtg gatgctgggg ttgtcgtcca cgaggaggag gcgcggcatc
     5341 tgggtacctc ggggggccgg gaggaagaaa gagtgctggg cacaacgcta ccagaaatgc
     5401 gcacttccaa cgcaagcgaa tggatcgggg ccgggcccag gaaccggcta gcgcagcagc
     5461 ctcttcaagg cccgcacccg ctccacatcc accaggcgca ccagcagcac gcgatccccc
     5521 acccagatcc aggcggcccc cgagggttcg cgcatggcca cctcggggcc cttcggcagc
     5581 cagcccttca cggaggcccg caggttcaga gccgtgcgcc attccggacg gtaggcctcg
     5641 aacagggcct ggcgctggcg ctccggcggc agggcgctct cgttccaccg ctggtcccag
     5701 gcatcgaagg ctccgttctc ccgccaggcc caggccgcgt cccaggcggg ccagggcagg
     5761 gaatcctcgg ccacaggagc ccactccacc gcggccaccg gactggtgcg gcggaccatg
     5821 ccttcctccg gcaacggtgc cgccagggcc atgcgctggg gcgggtgtgc cgtgaggaat
     5881 cccgggcccg cagcgcggcg gcgccaggat ccgccctcca gaaaccaggc cgtccagccc
     5941 tgggcgcccc catgccacag gcgatccgcc cggggaaacc agagccggtc gccgctgcgc
     6001 cagggcaggt ccaggcgggg accgggcaga tcccggccat cgtctgaaag gctctcccgt
     6061 ttcgtggcta cgccgcggag cggcggcgga agacccggtt cgtcccaggc cgccagggtc
     6121 gcctcaccca gatcggagtc caggggcagc gcactgagca acaagctggg ctccccgcgg
     6181 ccttccggtt tttcgaagaa ccccagcagc gcggccttcc cgtcccagct gaagcggctc
     6241 caggggccgg actgggtgga ccagatcacg cggccttcgg gcacctccag cagccgggtt
     6301 tcgaagcgcg tggatcccat ctgcagcgtc accagcaggc ggttgccctt gaggggatcc
     6361 agccgggccg agcagagggg cgcatcgaag cggtagcggc gccactccag gcccttccac
     6421 aacaccacct cgctgcgtcc gccggggcca ttcatggcca ggccctggtc gccgaggtag
     6481 ggcgaggccg gttcccaggg cgtgccgaaa ccgccctcga agggccaggc ctcggattga
     6541 tcgggatcct gggtgccctg gaagcgcggc gcccagccat cctccatgcg gagctccgcc
     6601 atggtttcgt agccgccgag gttcatgatg gccggcgttt ccaccgcggc cacacccccg
     6661 gcgctcacgg ggcgcggcgc ctgcaccacc gcgaagagca gcagcatggc ggcgatgaag
     6721 agggtggcga tgatgtaccg ttgggggatc acgttggggc cacaaagaga gcaccatcat
     6781 gaccgatcgg agacgcgccg cgatgaagca caagcccgcc gtggaaaccg aactcaagct
     6841 gcgcatcccc gccacgggcc cctaccggcc cctgctggag gccctgggct tccgcgaggc
     6901 cattcccgcg caatccgaga tcagcctgct ctgggaccgg aacggggagc tgcggaccgc
     6961 gggctcggcc ctgcggacgc ggcgcttcgc aggcgccttc cggctgacct ggaaggggcc
     7021 caaggtgcct gaccccatcc tgaagatccg ccccgagcac gagaccggca tcgaggacgg
     7081 cgaggccctg gaggccatcc tccgcgccct gggctacgcg cccgtgctgc gcatggagaa
     7141 ggtccgcgcg gtgtgggagc gcgcggagct ggaggcctgc ctcgatgaga cccccttcgg
     7201 ctgctacctg gagctggagg gcgagcccca ggccatccgt gccgccatgg agggcctggg
     7261 ccacgccccc ggccgcgccg aaccccgcag ctacccggag ctgtaccagg cgcacgggct
     7321 gggttaagca tcaaagagct ggaacacaga ggtcgcagag ggacacagaa gacacagaga
     7381 aaagcctttc ttgttcttct ctgtgccctc tgtgcgaact ccgtgtcctc tgtgttccgc
     7441 ttttgttttt agaccttgag cacctgctcc aggtcctcga tgaggtcctg gacgtcctcc
     7501 acgcccacgc tgaggcgcag gaggttgtcg ttgatgccca ggcgctggcg gtcggcttcg
     7561 ggcacgctgc cgtgggtcat gctggccggg tggcagacga ggctctccac gccgcccagg
     7621 ctctcggcca gggagaagac cttgaaggaa gacgccatgc ggcgcgtgcg ctcggcgtcg
     7681 cccgtgtcga agctcacgat gccggagaag cccttcatct gctgcttggc cagggcgtgc
     7741 tgggggtggg attccaggcc cgggtagtag acggccttca ggtccttgcg ggcctccagc
     7801 cagcgggcga tctgaagggc gctctggttg tggcgctcca tgcggaggtg cagggtcttg
     7861 gtgccccgca ggatgagcca ggattccatg ggcgagagga tgccgcccgc ggccttctgg
     7921 tggaagcgca ggccctcggc gatgtcctcg cggttggtga tggcgatgcc gccgatggag
     7981 tcgctgtggc cgttcaggta cttggtcgtg gaatggaaga ccaggtccgc ccccagctcc
     8041 aggggtcgct ggttgtaggg cgtggcgaag gtgttgtcca cggccagcac ggccttggag
     8101 cccatcaggg tcatgacctg gcggatgccg ggaatgtccg tgagccccag catgggattg
     8161 gtgggcgtct ccagcatcac cagcttggta ttgggccgca gcgccgcctt gaaggccgcc
     8221 aggtcgcccg tttccacctg ggtgtaggtg aggccgaagc gggtcatcac cttgtccagc
     8281 aggcggaagg tgccgccgta gacgttgtcg cccagcacca catggtcgcc gctggaaagc
     8341 tgctcgaaga tggcctgcac cgccgccatg cccgagccaa aggccatgcc gtgggcgccg
     8401 ccctccagcg ctgccaggtt gccttccagg gcgtcgcggg tggggttgcg cacgcgggcg
     8461 tagtcgaagc ccttgttctg gccgatgccc tcctgcacgt aggtgctcgt gaagtagacg
     8521 ggcgtcatga tggcgccgtt gttcggatcc ggggactggc cggcatggat gcagcgggtg
     8581 tcgaaacggc cttcggggtt catgggacca tccttcgtga gccttcagtg tgagggggtg
     8641 ccgccatgag gaaaagcatc gcgtcggttt cgatggccct ggccctgctg gcttgccgat
     8701 ccgataagcc cgaagaccag gtgcgcaggg ccttcgagac ctgcgtggcc gccgtggagg
     8761 ccggggatgc cgccgcggcc accgagcccc tggacgccgc cttccggggg cccgagggca
     8821 tggataaacc gggtgcgcgc ctgttcctca tgggcctcct gcgccaggag aaggtcgggg
     8881 tggccgtgat ccggaacgat gtggccctgc gggggaacga ggcctttcag gacgtcgacc
     8941 tgatcctcac gggccgcagc ggcggcctcc tgccccagga cgcctcccgg cgcgccttca
     9001 gcctgcgctg gcggaaggct ggcggtgact ggaagctcgt ggccatcgaa gagcgttgaa
     9061 aatcagctcc ccaggtacgc catgaactcg ctgtggaggt ccaggggtag gcggcaggcc
     9121 tgctcctctt cgctcagcag ctgctcgcag cggggcacgg cccgcagctc ggcggccggg
     9181 atgccccggc tccgggccag gcgcagggtc tgcatcaccg catccatcca ccccagctgg
     9241 tagtgggtgg ccagcagcat ggcgtgggcc cgggcgttat cgggatcgat ctcgatggcc
     9301 tggagcagct gccgccgggt ggtctccagg atgtccttcc ggacttcggc gcggccagtg
     9361 gcgccagcgt ctgcctgggc cgccggaggc cggccaggcg cgggtttccg cacggggatg
     9421 ggcgcctcgg ccgccagcgg gaccgcaggg agcccccagc gaggccctgg cggggtcaat
     9481 gccttcgcag tgggacgccg cgccggaacc gccacggtgg gacggtccgg ctcccagcgc
     9541 caggcgctgt cctgggccga ccgcagggcg gcgcccagct cttccgcaga ctggaaccgg
     9601 ctggcgggat ccttggcgat ggcccggttc agaacaacct ggacatcgcg gctgatctcc
     9661 cggcaggccg cggggggcag aggcggcggc gtctcgtgca gcagccggta gatcaccgtg
     9721 ccggggctcg ccccg
//
LOCUS       DASUDT010000031         5427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2122434, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000031 DASUDT010000000
VERSION     DASUDT010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5427
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2122434"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1629)
                     /locus_tag="VFV26_00710"
     CDS             complement(<1..1629)
                     /locus_tag="VFV26_00710"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEX4844705.1"
                     /translation="MAHPMDRYFAPPEGRIFACFPGAEDRPGQRRMAELVHNTVVDGT
                     ARFQAWRDSGGESDARPEAVVQAVEAGTGTGKSLGYLVPALAAGRHPILVATRTKQLQ
                     RQLLEEDVPRAAGILGRPIKAVLAKGRANYLCRTAWEAVSTDAHLEFTRADQQLWLAL
                     QRWTRETQDGDREGLGRFGEGESPLWDKINARAERCTGRQCPRYEDCFLTKLRAEVAE
                     ADLIIVNHALLLADRVLRESAFGQVLPDAPVLILDEAHDLEEQLTESCAEAWSSRAMN
                     LLFTDLRDASKGSGAALLALLEPWERAWADLLTWVPLEGGVLPLLSPGPEMKALADAV
                     GAWVEAGHPLWLETRRLGAADPENPLWMRLAERVGTAFSRMEQIFAQPEGWVSTVSRE
                     GSHIVHFKSNPVDVRPFFHQHVRRGFESVVLTSATLRDGRGFNGLGLRLGLTKPEVEV
                     AEHVESPFDFEAQGLLFVPPDLPERRPGAGGGVGDPAWVEASLSAMERMLRASRGRAL
                     LLFTSRKMLAAFRPRLEAALPEMTFFVQGDGLSRT"
     gene            complement(1670..2128)
                     /locus_tag="VFV26_00715"
     CDS             complement(1670..2128)
                     /locus_tag="VFV26_00715"
                     /inference="COORDINATES: protein motif:HMM:NF014629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX4844706.1"
                     /translation="MYPIGLIAFGRLRLEPCRGLERHYLDMLRAYARVDLAELPEGKG
                     DPARQLREEAERLRPKLKAVQCPVLLTPEGKLRDSETLARWLGERMDRGESLAFVLGS
                     SHGFDPELKKEIREQLSLSPMTFPHELSRVMLLEQLYRAFTILRGKDYHK"
     gene            2218..2841
                     /locus_tag="VFV26_00720"
     CDS             2218..2841
                     /locus_tag="VFV26_00720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844707.1"
                     /translation="MRRSLMLSLASLLLVPAFVGCGGDEIPTTAPAAAKEPADILYHL
                     QYLAVRKDYKHAALIAPITPDVVFPSARQMHMDAKALGISLTPEELKGLGIEHLAANL
                     DALPGGPDAVNYPDYTVKDARLAYNAGIYRLTKGFTTKTWGRMRHMGITDNTAARQFG
                     AQTVVKDMTLGFDGTKVLSVSCLKKPDGTYGVSFMRYLVSLQGLKQQ"
     gene            2943..4190
                     /locus_tag="VFV26_00725"
     CDS             2943..4190
                     /locus_tag="VFV26_00725"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HEX4844708.1"
                     /translation="MTGRVNLFDSVNRQFDVAADILGLTQEIRELLKTPYREITVAMP
                     IRMDDGTLRVFKGYRVQHNGVRGPQKGGIRFHPDLVLDDVRALASLNTWKTAVVNIPF
                     GGAKGGIQCDPATMSQHELEMLTRRYISKLSMVLGPTRDVPSPGLNTNAQTMAWVMDE
                     YGRKNGHQPACVTGKPLELGGSQGREAATGKGVALCTREAYEGVLGLSLRGARVVLQG
                     FGNVGGFAAGFLHEQGARIVAVADEGGAVRRAEGLDIPALLAHARQPKGGVAGFPGGE
                     AFDPSAVWEQPCDILIPAALGGVLTEDTAPRVAARLVVEGASAPTTPEADRIFQERGI
                     LLIPDILANAGGVTVSYFEWVQNLQQLFWNEAEIFEKEEKILLQAFRDVAEKVQRHGC
                     TWRTAALVLALERVRTANELRGW"
     gene            4308..5363
                     /locus_tag="VFV26_00730"
     CDS             4308..5363
                     /locus_tag="VFV26_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844709.1"
                     /translation="MSKKNVVHVVGTGTIGEPLIGLLTEYKKELGIDEVTFHKNSVAD
                     RPKVKALLKRGAKLVVDADKVEGFRAWGIEPAMLHDQALEEASVVIDCSPKGMDMKEK
                     LYSKYEHNTKGFIAQGSEFGFGTMYARGINDEVLKTAGQYVQVVSCNTHNLSCIIDTL
                     ALSEGADNLIEGSFVCMRRANDISQVKDFCPAPQVGTHKDGKFGTHHARDAYHLFQTK
                     GLELSLFSSAVKLPTQYMHSLWFDLRLKRPTTLEALKLRIKANDRIAITEKKDANTVF
                     SFGRDQGHFGRILNQTVIPLSTMTMPTENRVVGFCFTPQDGNSLLSSVAAALRFIHPE
                     DFEERIQVLKPYFFDEV"
BASE COUNT          896 a         1966 c         1766 g          799 t
ORIGIN      
        1 ggtgcgcgag aggccgtccc cctgcacgaa gaaggtcatc tccggcagcg cggcctccag
       61 ccgcgggcgg aaggccgcca gcatcttccg gctggtgaag agcaggaggg cccggccccg
      121 gctggcccgc agcatgcgct ccatggccga cagtgaggcc tccacccagg ccgggtcgcc
      181 cacgccgccg ccggcgcccg gccggcgctc cggcaggtcc ggcggcacga agagcaggcc
      241 ctgggcctcg aaatcgaagg ggctctccac gtgctcggcc acctccacct cgggtttcgt
      301 gagccccagg cgcaggccca ggccgttgaa gccgcggccg tcgcggagcg tggcgctggt
      361 gaggaccacg ctttcgaagc ccctccgcac gtgctgatgg aagaagggcc ggacatccac
      421 gggattcgac ttgaagtgga cgatgtgcga gccctcacgg ctcaccgtgg acacccagcc
      481 ctcgggctgg gcgaagatct gctccatgcg cgaaaacgcc gtgcccaccc gctccgcgag
      541 gcgcatccag aggggattct cgggatcggc ggcgcccagg cggcgggtct ccagccacag
      601 ggggtggccc gcctccaccc aggctcccac ggcatccgcc agggccttca tctcagggcc
      661 gggactcagc aggggcagca cgccgccctc caggggcacc caggtgagga ggtccgccca
      721 ggcccgctcc cagggctcca gcagggccag aagcgccgcg ccagatccct tggacgcgtc
      781 ccgcagatcc gtgaacagca ggttcatggc gcggctggac caggcctcgg cgcagctctc
      841 cgtgagctgc tcctccaggt cgtgggcctc gtcgaggatg agcacgggcg cgtccggcag
      901 cacctggccg aaggcggatt cccgcagcac ccggtccgcc agcagcagcg cgtggttcac
      961 gatgatgagg tcggcctcgg ccacttcggc ccgcagcttg gtgaggaagc agtcctcgta
     1021 gcgcgggcac tggcggcccg tgcagcgctc ggcccgggcg ttgatcttgt cccagagggg
     1081 cgactcgccc tcgccgaagc ggcccaggcc ctcgcggtcg ccatcctggg tctcccgggt
     1141 ccagcgctgg agggccagcc agagctgctg gtcggcgcgg gtgaactcca ggtgggcgtc
     1201 cgtggacacg gcctcccagg ccgtgcggca caggtagttg gcccggccct tggccagcac
     1261 cgccttgatg gggcggccca ggatgcccgc ggcccggggc acgtcctcct ccagcagctg
     1321 gcgctggagc tgcttggtgc gcgtggccac caggatggga tggcggcccg ccgccagggc
     1381 cggcaccagg tagcccaggc tcttgcccgt gcccgtgccc gcctccacgg cctggaccac
     1441 ggcctcgggc cgggcgtcgg attcgccgcc actgtcccgc cacgcctgga accgggccgt
     1501 gccgtccacc accgtgttgt gcaccagctc cgccatgcgc cgctggccgg gccggtcctc
     1561 cgcgccgggg aagcacgcga agatccggcc ctccggcggg gcgaagtagc ggtccatggg
     1621 atgcgccatc cgtccagtct ggggcaaagg cggaaaaagg gcgaatgccc tatttgtggt
     1681 agtccttgcc ccgcaggatc gtgaacgccc ggtagagctg ctccaggagc atcacccggc
     1741 tcaactcgtg ggggaaggtc atcggggaca ggctcagctg ttcccggatc tcttttttca
     1801 gttcgggatc gaagccgtgg ctgctgccca gcacgaaggc caggctttcc ccgcggtcca
     1861 tgcgctcgcc cagccagcgc gccagggttt cactgtcccg gagttttcct tccggcgtga
     1921 gcaggaccgg gcattgcacg gccttcagct tcggacgcag gcgttctgcc tcctcccgga
     1981 gctgccgggc ggggtcgccc ttgccttcgg gcagttccgc caggtcgacc cgcgcatagg
     2041 cccggagcat gtccaggtag tgccgttcca gcccccggca gggttccagg cgcaggcggc
     2101 cgaaggcgat caatccgatg ggatacatga ggacattgtg agcaattccc cttggcagcg
     2161 cagcgggatg gttccaccat cctttcatcc tgaccatcct gtcccggagg tacttccatg
     2221 cgacgttccc tgatgctgtc cctcgccagc ctgctgctcg tgcccgcctt cgtcgggtgc
     2281 ggcggcgacg agatccccac caccgcgccg gccgccgcca aggagcccgc cgacatcctc
     2341 taccacctgc agtacctggc cgtgcgcaag gactacaagc acgccgccct catcgccccc
     2401 atcacgccgg atgtggtgtt cccctcggcc cgccagatgc acatggatgc caaggccctg
     2461 ggcatctccc tcacccccga ggaactgaag ggcctgggca tcgagcatct ggccgccaac
     2521 ctggacgcgc tgccgggcgg tcccgatgcg gtcaactacc ccgactacac cgtgaaggat
     2581 gcgcgcctgg cctacaacgc cggcatctac cgcctgacca agggcttcac caccaagacc
     2641 tggggcagga tgcggcacat gggcatcacc gacaacacgg ccgcccgcca gttcggcgcc
     2701 cagacggtgg tgaaggacat gaccctgggc ttcgatggca ccaaggtcct ttccgtcagc
     2761 tgcctcaaga agcccgatgg cacctacggt gtctccttca tgcgctacct ggtctccctg
     2821 cagggcctga agcagcagta gaccgcccat tccagcgcca gtcccgcccc ggggagcccc
     2881 caggttcccc ggggcgcgct atgctgggcc cggctcagga ccatgcgcag gcagggggct
     2941 ccatgaccgg acgggtgaac ctcttcgata gcgtgaaccg ccagttcgac gtggccgccg
     3001 acattctcgg cctcacgcag gagatccggg agctgctcaa gacgccctac cgggagatca
     3061 ccgtggccat gcccatccgc atggacgacg gcaccctcag ggtgttcaag ggctaccggg
     3121 tgcagcacaa cggggtgcgc gggccccaga agggcggcat ccgcttccac cccgatctgg
     3181 tgctggatga tgtgcgcgcc ctcgccagtc tcaacacatg gaagaccgcc gtggtgaaca
     3241 tccccttcgg tggggccaag ggcgggatcc aatgcgaccc cgcgacgatg tcccagcacg
     3301 agctggagat gctcacccgc cgctacatct ccaagctctc catggtgctg ggccccaccc
     3361 gggatgtgcc gtccccgggc ttgaacacca acgcccagac catggcctgg gtcatggacg
     3421 agtacggccg caagaacggc caccagcccg cctgcgtcac gggcaagccc ctggagctgg
     3481 ggggcagcca gggccgggag gccgccacgg gcaagggcgt ggccctctgc acgcgggaag
     3541 cctatgaagg tgtgctgggc ctgtccctcc ggggcgcccg ggtggtcctc cagggtttcg
     3601 gcaacgtggg cggcttcgcg gcgggattcc tccacgaaca gggggcgcgg atcgtcgccg
     3661 tggccgacga aggcggcgcc gtgcggcggg cggagggcct cgacatcccc gccctcctcg
     3721 cccatgcgcg gcagcccaag ggtggcgtgg cgggcttccc tggcggcgag gcctttgatc
     3781 cctcggcggt gtgggaacag ccctgcgaca tcctcatccc cgcggccctc ggcggcgtgc
     3841 tgaccgaaga cacggcgccc cgcgtggccg cgcgcctcgt cgtcgaaggc gccagcgccc
     3901 ccaccacgcc cgaagcggac cggatcttcc aggagcgcgg catcctcctg atccccgaca
     3961 tcctcgccaa tgccggcggc gtcaccgtgt cctacttcga atgggtgcag aacctccagc
     4021 agctcttctg gaacgaggcc gagatcttcg aaaaggagga gaagatcctg ctgcaggcct
     4081 tccgggacgt ggcggaaaag gtgcagcggc acggctgcac ctggcggacc gccgccctgg
     4141 tgctggccct ggagcgggtc cggaccgcca acgaactgcg cggctggtag gcccccccat
     4201 cacaaaagcc ccccgcctcc cttttgcggg tggcttttcc tttccgcgcc tgggaaaatc
     4261 cctagttggg ccggggggcg tcccgaatca ccggccgcgg aggatccatg tccaagaaga
     4321 acgtcgtcca tgtggtcggc accggcacca tcggcgagcc gctgatcggc ctgctgacgg
     4381 agtacaagaa ggaactgggc atcgacgagg tcacgttcca caagaacagc gtcgccgacc
     4441 gccccaaggt gaaggccctc ctcaagcgcg gcgccaagct cgtggtggac gcggacaagg
     4501 tggaaggctt cagggcctgg ggcatcgagc ccgccatgct ccacgaccag gccctggaag
     4561 aggcctccgt cgtcatcgac tgcagcccca agggcatgga catgaaggag aagctctatt
     4621 cgaagtacga gcacaacacc aagggcttca tcgcccaggg cagcgagttc ggtttcggca
     4681 ccatgtacgc ccggggcatc aacgacgagg tgctcaagac cgccggccag tacgtgcagg
     4741 tggtcagctg caacacccac aacctctcct gcatcatcga caccctggcc ctgagcgaag
     4801 gcgccgacaa cctcatcgaa ggcagcttcg tctgcatgcg ccgcgccaac gacatcagcc
     4861 aggtgaagga cttctgcccg gcgccccagg tgggcaccca caaggacggc aagttcggca
     4921 cccaccacgc ccgcgacgcc taccacctgt tccagaccaa gggcctggag ctgagcctct
     4981 tcagcagcgc cgtgaagctg cccacccagt acatgcacag cctctggttc gacctgcgcc
     5041 tgaagcgccc caccaccctg gaggccctca agctccgcat caaggccaac gaccgcatcg
     5101 ccatcaccga gaagaaggac gccaacaccg tgttctcctt cggccgcgac cagggccact
     5161 tcggccgcat cctcaaccag accgtcatcc ccctcagcac catgaccatg cccaccgaga
     5221 accgcgtggt gggcttctgc ttcacgcccc aggacggcaa cagcctgctg tccagcgtgg
     5281 ccgccgccct gcgcttcatc cacccggagg acttcgagga gcgcatccag gtgctcaagc
     5341 cgtacttctt cgacgaagtg tagtcaggct cgaatcgccg cgcgattcga gtagagaaag
     5401 ggcccgctcg cgggcccttt ctcatgg
//
LOCUS       DASUDT010000032         2411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1481883, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000032 DASUDT010000000
VERSION     DASUDT010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481883"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VFV26_00735"
     CDS             <1..681
                     /locus_tag="VFV26_00735"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX4844710.1"
                     /translation="KVPVLVDNTFATPILQNPIKHGVTLVLHSATKFLGGHGDVLAGL
                     VATNNDWATELRKVRVITGNVLHPLAAYLLHRGLPTLPLRVRAQQEGAKLIAERLAKH
                     PAVSAVHFPGLPGQDPMGLLGRQMQGPGSLMAFELKGGFEAASVVMAEVKLMTPAVSL
                     GSVDTLIQHPAALTHRVVNAEAREHSGVSQSLMRLSVGLEGPEDLWADLEQALAKAMA
                     EATMTAVR"
     gene            784..1494
                     /locus_tag="VFV26_00740"
     CDS             784..1494
                     /locus_tag="VFV26_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844711.1"
                     /translation="MASLEGLIHVHCGDVSAAVHRRSGLPGPLQVWRDSPAVGPWTRD
                     RARLADLRAAWWGPPEPGGEAVEPIPGPMSATEPVLWFGPDPWEQACLLWVLAELPGD
                     ALPDLVPLDCSVGQLPPAALAPLFAQRILLGEEALVAARALWERFLEDGWGGMGGRGI
                     PGLPWLAPALARLAEDHPAVGPGRTRLQIQSLLGQGLCAIPALMAGLWRLEAPHHGAW
                     YGDRFVARMVESLEARLG"
     gene            1506..>2411
                     /locus_tag="VFV26_00745"
     CDS             1506..>2411
                     /locus_tag="VFV26_00745"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEX4844712.1"
                     /translation="MTFAPLPLSSKITVLRGLGPARAAALQEAGLDSLRDLLWSLPYR
                     YVDRGSLRPLGSLELRGLEPAEPGVVTVLGTLRDLRQSTTRVQRMTLTEALLEDGTGS
                     LRLIWFNQPYLARALKVGDRLLAFGNLSVGRHGLEMRGPQIEVMGRGEDLGWVRRFLP
                     LYRKLGPLTGRVRQKLAQEALGRAHAGEEWLPLDLAKDLPDTMAAFRLLHDPPDDSDP
                     ALLEAGTSPAHQRLAAEELFAFSLGVALRRAGRLKRRGLVVPTSPELRERLRSFLPFH
                     LTGAQRRSFKEIVDDLTSGRVMNRLL"
BASE COUNT          316 a          852 c          871 g          372 t
ORIGIN      
        1 aaggtgcccg tgctggtgga caacaccttc gccacgccca tcctgcagaa ccccatcaag
       61 cacggtgtga ccctggtcct ccacagtgcc accaagttcc tgggcggcca cggcgacgtg
      121 ctggcgggcc tggtggccac caacaacgac tgggccacgg agctgcgcaa ggtccgcgtc
      181 atcacgggca acgtgctgca cccgctggcg gcctacctgc tgcaccgcgg cctgcccacg
      241 ctgccgctgc gcgtgcgcgc ccagcaggag ggcgccaagc tcatcgccga gcgcctggcc
      301 aagcatcccg ccgtatccgc cgtccacttc ccgggcctgc ctggtcagga tcccatgggc
      361 ctcctgggcc gccagatgca gggccccggc tcgctcatgg ccttcgaact gaagggtggc
      421 ttcgaggccg cctccgtggt catggccgag gtgaagctca tgacgcccgc ggtgtccctg
      481 ggcagtgtgg acaccctcat ccagcacccg gcggccctca cccaccgcgt ggtgaacgcc
      541 gaggcccgtg agcacagcgg tgtttcgcag tcgctcatgc gtctctccgt gggcctggaa
      601 ggtcccgagg acctgtgggc cgatctggag caggccctgg ccaaggccat ggccgaagcg
      661 accatgactg cggtacggta ggcaagaaaa aaccgcggaa tatacgcggt tgattgacct
      721 gaagtgggcc gtatcctggg gcacccggga gcggcccatg gcagatgtct ggaagatgga
      781 tccgtggctt cgctcgaagg gttgatccac gtccactgcg gggatgtctc cgcggcggtc
      841 caccggcgtt caggcctgcc ggggcccctt caggtgtggc gggactcccc ggcggtgggc
      901 ccctggaccc gggaccgggc ccgcctggcg gatctgcgcg cagcctggtg gggtcctccg
      961 gaaccagggg gggaggcggt cgagcccatc ccgggtccga tgtcagccac ggagccggtg
     1021 ctctggttcg gcccggatcc ctgggaacag gcctgcctgc tctgggtgct ggcggaactt
     1081 ccaggggacg ccctgccgga tctggtgccc ctggactgca gcgtgggcca gctgccgccc
     1141 gcggccctgg cgccgctttt cgcgcagcgg atcctgctgg gcgaggaggc cctcgtcgct
     1201 gcccgggccc tttgggagcg ctttctcgag gatggctggg ggggaatggg agggcggggg
     1261 atcccaggcc tgccctggct ggccccggcc ctggcgaggc tggccgagga ccatcccgcg
     1321 gtgggtccgg gccgcacccg cctccagatc cagagcctcc tgggtcaggg cctgtgtgcg
     1381 attccggccc tgatggctgg actgtggcgg ctggaagcgc cccatcatgg cgcctggtac
     1441 ggggatcgct tcgtggccag gatggtggag tccctggagg cgcggctagg ctgatggagc
     1501 ctgccatgac cttcgccccc ctccccctgt cctccaagat cacggtcctc cggggcctgg
     1561 gaccggcgcg ggcggcggcg ctgcaggagg cgggcctgga cagcctgcgg gatctgctgt
     1621 ggagcctgcc ctaccgctat gtggatcgcg gcagcctgag gcccctgggc agcctggagc
     1681 tgcggggcct cgaaccggcc gagcccggcg tcgtcaccgt gctgggcacc ctgcgggacc
     1741 tgcgccagag caccacgcgg gtgcagcgca tgaccctcac ggaggccctg ctggaggacg
     1801 gcacgggcag cctccgcctc atctggttca accagcccta cctggcccgg gcgctgaagg
     1861 tcggcgaccg cctgctggcc ttcgggaacc tgtccgtggg ccgccacggc ctggagatgc
     1921 ggggcccgca gatcgaggtg atggggcgcg gcgaggacct cggctgggtc cggcgcttcc
     1981 tgcccctgta ccggaagctg ggccccctca cgggccgggt ccggcagaag ctggcgcagg
     2041 aggccctggg gcgggcccac gccggggagg aatggctgcc cctggacctg gcgaaggatc
     2101 tgcccgacac catggccgcc ttccggctgc tgcacgatcc gccggacgac agtgacccgg
     2161 ccctgctgga agcgggcacc tcgcccgccc accagcggct ggcggcggag gaactcttcg
     2221 ccttctctct gggcgtggcc ctgcgccggg cgggccgcct caagcgccgg ggcctggtgg
     2281 tgcccacatc tcccgagttg cgtgaacgcc tgcggtcctt cctgcccttc catctgacgg
     2341 gggcccagcg ccggtccttc aaggagatcg tggacgacct cacgtcgggc cgcgtgatga
     2401 accgcctgct c
//
LOCUS       DASUDT010000033         2782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1283227, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000033 DASUDT010000000
VERSION     DASUDT010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283227"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1932)
                     /gene="flhA"
                     /locus_tag="VFV26_00750"
     CDS             complement(<1..1932)
                     /gene="flhA"
                     /locus_tag="VFV26_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEX4844713.1"
                     /translation="MARLSRRSDLAAPVFVMIVLVVMVLPLPAFALDLLIVLNITLSL
                     VILMVGMYVARPKEFSSYPSVLLVITLFRLAINVATTRRILLYGGDQGADAAGHMVKA
                     FGQFVVGGSYVIGLVVFLILLAIQFLVINHGAGRIAEVTARFTLDALPGKQMAIDADL
                     NAGYIDEQEARKRRKDLQEEAGFYGAMDGAVKFTQRDAVAALIILAVNIIAGILLGII
                     RYNLPVMQALEVYTLLTVGDGLVTVIPSLLISVGGAILTTRSGSDSTGLGSEVLGQLG
                     ADYRPLAIAAATLFLFGAVPGLPLFPFWVMAAIFTVMAYAAWKLPKAPPGAEETAAAA
                     EKAKAAAAESAERVEGLLKVDPLGLEVGYSLIPLLDVNQGGTVLERIKAVRRQMAQEL
                     GIVVPPVRIRDNLQLPPHTYRLLLRGEEIARAELQPGQFLAMNPGTAAEELSGTPTSE
                     PAFGLPAYWIPDAQRDRAQMLGYTVVEPATVLTTHLSELIKQHAPDLLGRPEVQHLLD
                     TLKESSPRLVDDLIPNVISVTTLQKVMHNLLRERVPVRDLGRILEATADAATMTKDVG
                     FVTEYVRQALGRALTSPHLSESGELGVLVLDPQIEQTLQGGIEQTDRGSFLALEPGRT
                     QELLSRIANGIAALLPGAQP"
     gene            complement(2049..2429)
                     /locus_tag="VFV26_00755"
     CDS             complement(2049..2429)
                     /locus_tag="VFV26_00755"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX4844714.1"
                     /translation="MTRSRRGEAARRLGLRAERLTLWLFWARGWDLVAWRQKLGRYEL
                     DLLLSRGPELRLLEVKARRPGAWVGADTALEPEQRLRLQRALRTWLDRVPWPGAVSFQ
                     RVSWAGWRCRLHPPERWDALKVHR"
     gene            complement(2569..>2782)
                     /locus_tag="VFV26_00760"
     CDS             complement(2569..>2782)
                     /locus_tag="VFV26_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844715.1"
                     /translation="YLLIGFGAVVWYLQGLRLDLGTDVLKRTPVDPRLLWVWLGYAMI
                     LAWKIVRLHGNLDRVQRSLLLPRRDE"
BASE COUNT          451 a          893 c         1017 g          421 t
ORIGIN      
        1 gggctgggcg ccgggcagga gggccgcgat gccgttggcg atgcgggaga gcagttcctg
       61 ggtgcgaccc ggctccaggg ccaggaagct gccccggtcc gtttgctcga tgccgccctg
      121 gagggtctgc tcgatctggg ggtcgagcac cagcacgccc agctccccgc tttccgaaag
      181 gtgcgggctc gtgagcgccc ggcccagggc ctggcggacg tactcggtga cgaagcccac
      241 atccttggtc atggtggccg cgtcggcggt ggcctcgagg atgcggccca ggtcgcgcac
      301 gggcacccgc tcccgcagca ggttgtgcat gaccttctgg agggtggtca cgctgatcac
      361 gttggggatg aggtcgtcca ccaggcgcgg tgagctttcc ttgagggtgt cgaggaggtg
      421 ctggacctcg ggccgcccca gcaggtccgg cgcgtgctgc ttgatgagtt cggacaggtg
      481 ggtggtcagc accgtcgcgg gctccaccac ggtgtagccc agcatctggg cccggtcccg
      541 ctgggcgtcg gggatccagt aggcgggcag gccgaaggcg ggctcggagg tgggggtgcc
      601 ggacagttcc tccgcggcgg tgccggggtt catggccagg aactggccgg gttgaagctc
      661 cgcccgggcg atctcctcgc cccggagcag caggcggtag gtgtgcgggg gcagctgcag
      721 gttgtcgcgg atgcgcacgg ggggcaccac gatgcccagc tcctgggcca tctggcgccg
      781 cacggccttg atgcgctcca gcaccgtgcc gccctggttc acgtccagca gggggatgag
      841 gctgtagccc acctccaggc ccagggggtc gaccttgagc aggccctcca cccgctcggc
      901 ggattcggcg gcggcggcct tggccttttc cgcggcggcg gcggtctcct cggccccggg
      961 gggcgccttg gggagcttcc aggccgcgta ggccatgacg gtgaagatcg cggccatgac
     1021 ccagaagggg aacagcggca gcccaggcac ggcgccgaag aggaagagcg tggcggccgc
     1081 gatggccagg ggccggtagt ccgcgcccag ctgtcccagc acctcgctgc ccaggcctgt
     1141 gctgtcgctg ccgctgcggg tggtgaggat ggcgccgccc acgctgatga gcaggctggg
     1201 gatcactgtc accaggccgt cgcccacggt caggagggtg tagacctcca gggcctgcat
     1261 caccggcagg ttgtagcgga tgatgcccag gaggatgccc gcgatgatgt tgacggccag
     1321 gatgatgagg gcggccacgg cgtcccgctg ggtgaacttc acggcgccgt ccatggcgcc
     1381 gtagaagccg gcctcctcct ggaggtcctt gcggcgcttc cgggcctcct gctcgtcgat
     1441 gtagccggcg ttcaggtccg cgtcgatggc catctgcttg ccggggaggg cgtccagggt
     1501 gaagcgggcg gtcacttcgg cgatgcggcc ggcgccgtgg ttgatcacca ggaactggat
     1561 ggccagcagg atcaggaaga ccaccaggcc gatgacatag ctgccgccca ccacgaactg
     1621 gccgaaggcc ttcaccatgt ggccggcggc gtccgcgccc tggtccccac cgtagaggag
     1681 gatccggcgg gtggtggcca cgttgatggc cagccggaag agcgtgatga ccagcagcac
     1741 cgaggggtac gagctgaact ccttgggccg ggccacgtac atgcccacca tgaggatcac
     1801 caggctcagg gtgatgttca ggacgatgag cagatccagc gcgaaggccg gcaggggcag
     1861 caccatcacc accagcacga tcatcacgaa gacgggcgca gcgaggtccg accgccggga
     1921 gaggcgagcc atatatggaa gcagacggtc caggaaggtc aacataccga cacccggggg
     1981 gttcggggcg agggctgtgc caaggccgat ggattcaggg aaaggttctc cccaggcttg
     2041 gaaagcctct atcgatggac tttcaaggca tcccaccgct ccgggggatg gagccggcac
     2101 cgccacccag cccagctcac ccgctggaag ctgacggcgc cgggccaggg cacccggtcc
     2161 agccaggtgc gcagggcccg ctggaggcgg aggcgctgtt cgggctccag ggccgtgtcg
     2221 gcgcccaccc aggctccggg ccgacgggcc ttcacctcca ggagccgcag ttccggcccc
     2281 cggctgagga gcaggtccag ctcatagcgg cccagtttct gacgccaggc caccagatcc
     2341 cagccccggg cccagaacag ccagagtgtc agccgttcgg cacgcagccc caggcggcgg
     2401 gccgcctcac cgcgcctaga ccgggtcata cgaggaaacc gtcaacaaga caactgatca
     2461 ccaccaaggc accaagacac caagaacagc agaagaatgt tttttgtctt tccttggtgt
     2521 cttggtgtct tggtggtgag tttttcgttt ttttcgggcc tgtgtacatc actcgtcccg
     2581 cctaggcagc agcaggctgc gctggacgcg gtcgaggttg ccgtggaggc ggacgatctt
     2641 ccaggccagg atcatggcgt agcccagcca gacccagagg aggcgggggt ccacaggggt
     2701 gcgcttgagg acatcggtgc ccaggtccag ccgcaggccc tggaggtacc agaccacggc
     2761 cccgaaaccg atcagcaggt ag
//
LOCUS       DASUDT010000034         5098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_510063, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000034 DASUDT010000000
VERSION     DASUDT010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5098
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510063"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VFV26_00765"
     CDS             <1..211
                     /locus_tag="VFV26_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844716.1"
                     /translation="VTYTITASGYHLKETHVYAGDDAPATIAPGQYGNTGYLFGYESS
                     ATYTVPLVDANGGGVWVVAHAVVCR"
     gene            300..1112
                     /locus_tag="VFV26_00770"
     CDS             300..1112
                     /locus_tag="VFV26_00770"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEX4844717.1"
                     /translation="MSDTPQEVPESVAAAPVPEAPKTFEPPKGFETKFRGLALHLSAF
                     DGPLDLLLHLIHEQKLDILNLPMADVTRQYMDYLALMEELNLEIAAEFVAMAAQLLQI
                     KSRLMLPRPPQETGEEDPREALVQRLLDYQQVKAAAMVLSDRESDWQKIAFAPGMDLD
                     DHKRVEEEPIRATLFDLLGAYREALMRLLPPPPVEVRTQPKTLEQRVMEVLRDLQDGL
                     WKPFQGLLGQARSREELVLTFLALLELVRTGRIALVQGETFGEIRVKAAEAA"
     gene            1109..1582
                     /locus_tag="VFV26_00775"
     CDS             1109..1582
                     /locus_tag="VFV26_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844718.1"
                     /translation="MNQVSGSLAVAHRQASLVGWALCAGTPALIGGLILSGMVPAGEH
                     RPEGVYLQLGYAFTGLVFLAAAWVLWRRGTVLRDFHRVPGPRQAPILLRETLLYAALS
                     ELSSFYGLVYWILVGRHGERHVFGFVLLAPILFLALAPRLDQWVKAAEPGPGEPR"
     gene            1634..2134
                     /locus_tag="VFV26_00780"
     CDS             1634..2134
                     /locus_tag="VFV26_00780"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844719.1"
                     /translation="MSELETPHPGHEDAPDQTQRLVLPVTGEPPIRTQKLSIPTGTAG
                     QTRMPPSPARPSRPGRWKLPLAFGGAILLGGGAYLLFTRGPGARPSVAPVSAPETVAP
                     GAQTYLEQAKAGDAHAMRMLGVMYYYGLNVPQDRDKGLYWYRKAVEHGSDAARAELEK
                     LGATVQ"
     gene            complement(2137..3948)
                     /gene="uvrC"
                     /locus_tag="VFV26_00785"
     CDS             complement(2137..3948)
                     /gene="uvrC"
                     /locus_tag="VFV26_00785"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX4844720.1"
                     /translation="MAAVRTNLDKSPALKRKLADLPTRPGCYLYRDEGGNLLYVGKAK
                     VLRNRVKSYFQQKRLDAKTRRLVARIWDVELIVCETELEALILENNLIKEHLPPFNIL
                     LRDDKSYPYVKLTWKEAFPKAYVTRKVRKDGSLYFGPFFPASTAYRTVELVYRFFQIR
                     DCDIEIDGKRGRACMKYQLHRCTAPCIAAVDQEAYREQAKEARLFLEGKRDELKARLE
                     AAMWKAAEAAAFEQAAQHRDALQQVDAWFTRQKAASADLDDTDVYGSAVLDGQACVHR
                     LLLREGRMVGRQEYLLDDVEAFDGAVLAQVLQRVYSVDPAPAKILAEVEPEEGDLLRD
                     WLSGLRGTKVRILTPQKGEKVDLLAMAQENARLALERKFEPARLNEAVLEGLQAFLGL
                     SHLPRRLECFDISHGQGREVVASCVVFSDGVPDKARYRRFKMTNEQNDDFANMHEAVT
                     RRYKRMKDEGQAFPDLVLIDGGLGQLHAAEQALKELGLEQLELASLAKKEELVFRPGS
                     SEAHRIPKSSPVLQLLQRIRDEAHRFAITYHRALRAKRTLQTELTQIPGIGPATAKKL
                     LQAFGSATRVREAEEKDLLEAVGRASAAKVLAWRRPS"
     gene            3996..4619
                     /locus_tag="VFV26_00790"
     CDS             3996..4619
                     /locus_tag="VFV26_00790"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4844721.1"
                     /translation="MLNLETFPVGPLGCNCSLLWDPASGQGVVVDPGGDGAKIRKRVE
                     ALGFKVTALLHTHAHFDHVGATRELQDLWQCPAHLHGDDTFLIEALPQQTGRFGMPAI
                     PQPEMAALNAGDRHLDLATLHTPGHTPGACCVHGAFAQGQVLLAGDTLFRGGVGRTDL
                     WGGSWDHLEQSIRRELYVLDGATLVIPGHGPLTTLGEEAASNPFVKA"
     gene            4661..>5098
                     /locus_tag="VFV26_00795"
     CDS             4661..>5098
                     /locus_tag="VFV26_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX4844722.1"
                     /translation="MPDLFATSFGCFGPVAIFLVIYLLACLKVVNEYERLVIFTLGKV
                     QDKPTGPGLCFVWRPFQTSVTVSLRTVVMDVPSQDIITRDNVSLKVSAVVYFKVLDPT
                     AAIVGVENYYYATSQMAQTTLRSILGEVTLDELLADREKLSQRL"
BASE COUNT          759 a         1766 c         1718 g          855 t
ORIGIN      
        1 ggtgacctac accatcaccg cctcgggcta tcacctcaag gagacccacg tctacgcagg
       61 cgacgatgcc ccggccacca tcgccccggg acagtacggc aacaccggct acctcttcgg
      121 gtatgagtcc tccgccacct acacggttcc gctggtcgat gccaacggcg gcggtgtctg
      181 ggtcgtggcc cacgcggtgg tctgccgcta gctttacagt ccttgtcttg gaaacaggcg
      241 cctttaccgg gcgcctgttt ccgtgatggg cggacgcccg aaggctgtaa aatcaaccca
      301 tgtccgacac cccccaggaa gtccccgaat ccgtggccgc agcccccgtt ccggaggctc
      361 cgaagacctt cgaaccaccc aagggcttcg aaacgaagtt ccggggcctg gccctgcacc
      421 tgtcggcctt cgacgggccc ctggacctgc tgctgcacct catccacgag cagaagctgg
      481 acatcctgaa cctgcccatg gcggatgtca cccggcagta catggactac ctcgcgctca
      541 tggaggaact caacctcgag atcgcggccg agttcgtggc catggccgcc cagctgctgc
      601 agatcaagtc gcggctcatg ctgccgcgtc cgccccagga aacgggcgaa gaggatcccc
      661 gcgaggccct ggtgcagcgg ctgctggact accagcaggt gaaggcggcg gccatggtgc
      721 tgtcggaccg cgaatcggac tggcagaaga tcgccttcgc gccgggcatg gacctcgatg
      781 atcacaagcg cgtagaggag gagcccatcc gcgccaccct gttcgatctg ctgggcgcgt
      841 accgggaggc cctgatgcgc ctcctgcctc cgcccccggt ggaagtccgc acccagccca
      901 agacgctgga gcagcgggtg atggaggtgc tgcgcgacct ccaggacggc ctgtggaaac
      961 ccttccaggg cctgctgggc caggcccgca gccgggagga gctggtgctc accttcctgg
     1021 ccctgctgga gctggtccgc acgggccgca tcgccctggt gcagggtgag accttcggcg
     1081 agatccgcgt caaggctgcc gaggccgcat gaatcaggtg tccggctccc tggctgtcgc
     1141 ccatcgccag gccagcctgg tgggatgggc gctctgcgcg ggcacccccg cgctcatcgg
     1201 ggggctgatc ctgtcgggca tggttccggc cggggagcac cggcccgaag gcgtctacct
     1261 ccagctggga tacgccttca cggggctggt ctttctcgct gccgcctggg tgctctggcg
     1321 ccgggggacg gtgctgaggg acttccatcg ggttcccggc ccgcgccagg ccccgatcct
     1381 gctgcgggag acgctgctct acgcggcgct gtccgaattg agcagcttct acgggctggt
     1441 ctactggatc ctggtgggac ggcatgggga acggcatgtg ttcggtttcg tcctcctggc
     1501 ccccatcctg ttcctggccc tcgcccctcg cctcgatcag tgggtgaagg cggcggaacc
     1561 aggccccggg gagcctcgat gacacccatg gcgctatcct tgaggtttcc acccgcgagc
     1621 cccaggggcc cccatgagtg aactcgaaac accgcatcca ggccatgaag acgcccccga
     1681 ccagacccag cgcctggtcc tcccggtgac gggcgagccc cccatccgga cccagaagct
     1741 ctccattccg acaggcaccg cgggccagac tcggatgccg ccttcccccg ccagaccttc
     1801 ccgcccgggc cggtggaagc tgccgctggc cttcggcgga gccatcctgc tggggggtgg
     1861 ggcctacctg ctgttcaccc gggggcccgg ggccaggccc tccgtggcgc cggtgtccgc
     1921 tccggaaacc gtggccccgg gcgcccagac ctacctggag caggccaagg ccggcgacgc
     1981 gcacgccatg cgcatgctgg gggtgatgta ctactacggc ctgaacgtcc cccaggatcg
     2041 cgacaagggc ctctactggt accggaaagc ggtggagcac ggcagcgatg cggcccgggc
     2101 cgagctggaa aagctgggcg caaccgttca atagcttcag ctgggacgcc gccaggccag
     2161 gacttttgcc gcgctggccc tgccgacggc ttccagcaga tccttttcct ccgcttcacg
     2221 cacgcgggtg gcgctgccga aggcctggag cagtttcttc gcggtggcgg ggccgatgcc
     2281 gggaatctgg gtcagttccg tctggagggt ccgcttggcc cgcagggccc ggtggtaggt
     2341 gatggcgaag cggtgggcct cgtcccggat gcgctggagc agctgcagca ccggcgagga
     2401 tttcgggatg cggtgggcct cgctggaccc gggccggaac accagctcct ccttcttggc
     2461 caggctggcg agttcaagct gttcgagccc gagctccttc agcgcctgct ccgccgcatg
     2521 cagctggccc agcccgccat cgatgagcac cagatccggg aacgcctgtc cttcgtcttt
     2581 catgcgcttg tagcggcgcg tcaccgcctc gtgcatgttg gcgaagtcgt cgttctgttc
     2641 gttggtcatc ttgaagcgcc ggtagcgggc cttgtcgggc acgccgtcgc tgaagaccac
     2701 gcagctggcc accacctcgc ggccctggcc gtggctgatg tcgaagcact ccagccgccg
     2761 gggcaggtgg ctgaggccca ggaaggcctg gagcccttca agcacggcct cattgaggcg
     2821 cgccggctcg aacttgcgct ccagggccag ccgcgcgttc tcctgggcca tggccaggag
     2881 gtcgaccttc tcgcccttct gcggggtgag gatgcggacc ttggtgcccc ggagtccgga
     2941 tagccagtcg cggagcagat cgccctcctc gggctcgacc tcggcgagga tcttcgcggg
     3001 cgccggatcg acgctgtaca cgcgctggag cacctgggcc agtacggcgc catcgaaggc
     3061 ctccacgtcg tccagcaggt attcctggcg gcccaccatg cggccctccc gcagcagcag
     3121 ccggtgcacg caggcctggc cgtccagtac cgcgctgccg tagacatccg tatcgtcgag
     3181 gtcggcgctg gcggccttct ggcgagtgaa ccaggcatcc acctgctgca gcgcatcccg
     3241 gtgctgggcg gcctgctcga aggcggcggc ctcggcggcc ttccacatgg cggcctccag
     3301 ccgggccttc aattcgtccc gcttgccctc caggaagagg cgggcctcct tggcctgctc
     3361 gcggtaggcc tcctgatcca cggcggcgat gcagggggcc gtgcagcggt gcagctggta
     3421 cttcatgcag gcccggcccc gcttgccgtc gatctcgata tcgcagtcgc ggatctggaa
     3481 gaaccggtag accagttcca ccgtgcggta ggccgtgctg gcggggaaga agggcccgaa
     3541 gtagaggctg ccgtccttgc ggaccttgcg ggtcacgtag gccttgggga aggcctcctt
     3601 ccaggtgagc ttcacatagg ggtagctctt gtcgtcccgc agcaggatgt tgaagggcgg
     3661 caggtgctcc ttgatgaggt tgttctcgag gatgagggcc tcgagttcgg tctcgcagac
     3721 gatgagctcc acgtcccaga tgcgggccac gaggcgccgg gtcttggcat ccagccgctt
     3781 ctgctggaag taggacttca cgcggttgcg cagcaccttg gccttgccca cgtagagcag
     3841 gttgccgccc tcgtcgcggt agaggtagca gcccgggcgc gtgggcaggt ccgccagctt
     3901 gcgcttcagg gcgggggact tgtcgaggtt ggttcggacg gcggccaccg gtcaagtgta
     3961 gctatcggcg gggccgggat tggggacaat gggggatgct gaacctcgag accttccccg
     4021 tgggcccgct gggctgcaat tgttccctgc tgtgggatcc cgcctcgggc cagggggtgg
     4081 tggtggatcc cgggggcgat ggggcgaaga tccggaagcg cgtggaggcc ctgggcttca
     4141 aggtcacggc cctgctgcac acccacgccc acttcgacca cgtgggggcc acgcgggagc
     4201 tgcaggacct ctggcagtgc cccgcccacc tgcatggcga cgacaccttc ctcatcgagg
     4261 ctctgcccca gcagacgggc cggttcggca tgcccgccat cccccagccc gagatggcgg
     4321 ccctgaatgc cggggaccgg cacctggacc tcgccaccct ccacacgccg ggccacacac
     4381 cgggcgcctg ctgcgtccac ggtgccttcg cccagggcca ggtgctgctg gccggggaca
     4441 ccctcttccg cggcggcgtg ggccgcacgg acctctgggg cggcagctgg gaccacctgg
     4501 agcagagcat ccgccgggag ctctacgtgc tggacggcgc cacgctcgtg atcccgggcc
     4561 acggccccct caccaccctc ggtgaagaag cggccagcaa tccgttcgtg aaggcctagg
     4621 accggcgtag actggggcca tcatcccccg gaggtcctca atgcctgacc tgttcgccac
     4681 atccttcggc tgcttcggcc ccgtcgcgat cttcctggtg atctacctgc tcgcctgcct
     4741 caaggtggtg aacgagtacg agcggctggt gatcttcacc ctgggcaagg tgcaggacaa
     4801 gcccacgggc cccggcctct gcttcgtgtg gcggcccttc cagacctccg tcaccgtgag
     4861 cctgcggacg gtggtgatgg acgtgcccag ccaggacatc atcacccgcg acaacgtcag
     4921 cctgaaggtg agcgccgtcg tctacttcaa ggtgctggat cccacggccg ccatcgtcgg
     4981 cgtggagaac tactactacg ccaccagcca gatggcccag accacgctcc gcagcatcct
     5041 cggcgaggtc acgctggacg agctgctggc ggaccgggag aagctgagcc agcgcctg
//
LOCUS       DASUDT010000035         3772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_465781, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000035 DASUDT010000000
VERSION     DASUDT010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465781"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1112)
                     /locus_tag="VFV26_00800"
     CDS             complement(<1..1112)
                     /locus_tag="VFV26_00800"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HEX4844723.1"
                     /translation="MNPFASFIPESLEARLQDGIRHALSLGAEGAEAFVSVSRSRKAK
                     VQNGALEDLTASKRGGLGVRVIRNGGKGHRTGLATTTDLAAADFRGLFAQAWELSALG
                     DEDPWLRQADPAGTDDLPSRFDPSVEAVTPEQRISWALELEAEARKASAKVAAVRESA
                     WSDGSGASLLLTQKGVRAPDVWSSCSAAIELAVADGEERQAAWHWDVARRPGLDLAAI
                     GAEAALKGERKLHPQRLPAGRYSVVLHPEVAVDLLGIVAGMLDAESVLKQRSLFAGKL
                     GEAIASPLLTLVDDGRLAEAPGRPALGTEPWDAEGLPTRRNVLLEGGVLKTYLHTLKT
                     AAEMGMAPTASAGRGFGSQPGATTFNLFPLPGDTAP"
     gene            complement(1221..3305)
                     /gene="coaE"
                     /locus_tag="VFV26_00805"
     CDS             complement(1221..3305)
                     /gene="coaE"
                     /locus_tag="VFV26_00805"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX4844724.1"
                     /translation="MHTTPFPILGLSGGIAAGKSFVAKQLAGHGWAVIDADALAREAV
                     QPGSEGLAALVAAFGPTCLRPDGALDRAWMAAHVFSSDPARAHLNAILHPRIEALLAA
                     RLAALPPATRGAVLDAALWVERGKAHHFDAFWTVDAPEELRLERLVARDGLDRDAALA
                     RLRAQASPPERALHADLVIPNDGREISGILNGAAQALLADWKVRRARTWRTPMPAPFT
                     ADQLRGILSALLSRGGDYGEVFVERRRAHALGMDDGRMEDVLASETFGASLRLMEGET
                     TRFADLIAPGFDELLEAARTLAAPGTGGAADIPALVMKHHPTPSPVERDPGLVPLSEK
                     VALVRRAEALARTHAETLRPGALKQVSAGYGDSTQQVWIAAAEARDGAWSGTLTEDHR
                     TQVVLRANVTAGDGIQLQTGYQALGETRGFELFTDEAVARTVHEAARLAIQALDAQPA
                     PAGTFPVVLSSSAGGTMIHEACGHGLEADLALAGMSAFAGKLGQKVAAEGVTIIDDGT
                     LPHKRGSQAIDDEGHPVSRVVLIENGVLKAYLQSRKTSRKMGTEATGNGRRESYRHLP
                     IPRMRNTFLAAGSEAPEAILRDLDRGLLVKHMGGGQVDTVTGNFVFQVTEGYWVENGE
                     PKYPVKNATLSGCGPEVLKGLTRIGSDLHHFDIGTCGKDGQGVPVSDALPTILCPALV
                     VGGTAEPLPSVL"
     gene            3531..>3772
                     /locus_tag="VFV26_00810"
     CDS             3531..>3772
                     /locus_tag="VFV26_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844725.1"
                     /translation="MRFKVTSIEYVYRVRVFADEGRSAAEIPDLPATAFDIKGRTVYP
                     DGRQVVFNSRKDFAERKVDVGGSETRAKHLVAPGVTP"
BASE COUNT          525 a         1258 c         1397 g          592 t
ORIGIN      
        1 tcgggcgccg tgtccccggg cagggggaac aagttgaagg tcgtggcgcc cggttggctg
       61 ccgaagcccc gcccggcgct ggcagtgggg gccatgccca tctccgcggc ggtcttgagg
      121 gtgtggaggt aggtcttcag cacgccgcct tccagcagga cgttgcgccg cgtgggcagc
      181 ccttccgcat cccagggctc ggtacccagg gccgggcgtc cgggcgcttc ggccagacgt
      241 ccatcgtcta ccagcgtgag caggggcgag gcaatggcct ctcccagctt tcccgcgaag
      301 aggctgcgct gcttgagcac ggattccgcg tccagcatgc cggccacgat gcccaggagg
      361 tccacggcca cttccgggtg cagcaccacc gagtaccgcc cagcgggcag ccgctgcggg
      421 tggagcttcc gctcgccctt cagggcggcc tcggcgccga tggcggcgag gtcgaggccg
      481 gggcgtcggg cgacatccca gtgccaggcg gcctgccgtt cctcgccgtc ggccacggcc
      541 agttcgatgg cggcagagca gctggaccac acatccggcg cccgcacgcc cttctgggtg
      601 agcaggaggc tggcgccgga gccgtcgctc caggcggatt cccgcacggc ggcgaccttg
      661 gcggaggcct tccgggcctc ggcctccagt tccagggccc aggaaatccg ctgctcgggg
      721 gtgacggcct cgacggatgg gtcgaagcgg ctggggaggt catcggtccc ggcgggatcc
      781 gcctgccgca gccatggatc ctcgtcgccg agggcgctca gctcccaggc ctgggcgaag
      841 aggccgcgga agtccgcggc ggcgaggtcc gtggtggtgg ccaggcccgt gcgatggccc
      901 ttgcctccgt tgcggatgac gcgcacgccg aggccgccgc gcttgctggc ggtgaggtcc
      961 tccagggcac cgttctggac cttggccttg cggctgcggg agacggagac gaaggcctcg
     1021 gcgccttccg cacccaggct cagggcgtgc cggatgccgt cctgaaggcg ggcttcgagg
     1081 gattcgggaa tgaaagaggc gaaggggttc atgaaaagcc tttgaactta accgcagatg
     1141 tcacagatgg gcgcagatga aagatggaag atcgatggct gcttctcatc tgcgaaatct
     1201 ccgtcatctg cggtttcaaa ctagagcacg ctcggcaggg gctcggcggt gccgcccacg
     1261 accagggccg ggcagaggat ggtgggcagg gcgtcgctca cgggcacgcc ctggccgtcc
     1321 ttgccgcagg tgccgatgtc gaagtggtgc aggtcgctgc cgatgcgggt gaggcccttc
     1381 agcacctcgg ggccgcagcc gctgagggtg gcgttcttca cgggatactt cggctcgccg
     1441 ttctccaccc agtagccttc ggtcacctgg aacacgaagt tgccggtgac cgtatccacc
     1501 tggccgccgc ccatgtgctt caccagcagg ccgcggtcga gatcccgcag gatggcctcg
     1561 ggagcctcgc tcccggcggc caggaaggtg ttccgcatgc gggggatggg caggtggcgg
     1621 tagctttccc tgcggccgtt gccggtggct tcggtaccca tcttccggga ggtctttcgc
     1681 gactgcaggt aggccttcag cacgccgttc tcgatgagca ccacccggct gacgggatgg
     1741 ccctcgtcgt cgatggcctg gctgccgcgc ttgtggggca gggtgccatc gtcgatgatc
     1801 gtgacgccct cggccgcgac cttctggccc agcttgcccg cgaaggcgga catgcccgcc
     1861 agggcaaggt ccgcttccag accatggccg caggcctcgt ggatcatggt gccgccggcg
     1921 ctgctgctga gcaccacggg gaaggtgccg gccggtgccg gctgggcatc cagggcctgg
     1981 atggcgagcc gcgcggcctc atgcacggtg cgggccacgg cctcatccgt gaacagctcg
     2041 aagccacggg tctcgcccag ggcctggtag cccgtctgga gctggatgcc gtctcccgcg
     2101 gtcacgttgg cacggagcac cacctgggtg cggtggtcct ccgtgagggt gcccgaccag
     2161 gcgccatccc gggcttcggc ggcggcgatc catacctgct gggtgctgtc gccgtagccc
     2221 gcggagacct gcttcagggc gccgggccgc agcgtctcgg catgggtccg ggcgagggcc
     2281 tcggcccggc ggaccagggc cactttttcg ctgaggggca ccaggccggg atcgcgctcc
     2341 acggggctgg gcgtcggatg gtgtttcatg accagggccg ggatgtccgc ggccccgccg
     2401 gtccccggcg cggcgagggt gcgggccgcc tcgagcagct cgtcgaagcc gggggcgatg
     2461 agatcagcga agcgggtggt ctcgccttcc atgagtcgga ggctggcgcc gaaggtctcg
     2521 gaggcgagca cgtcctccat gcggccatcg tccatgccca gggcatgggc ccggcgccgc
     2581 tccacgaaga cctcgccgta gtcgccgccc cggctgagga gggccgacag gatgccgcgg
     2641 agctgatcgg cagtgaaggg tgcaggcatc ggggttctcc acgtccgcgc acggcggacc
     2701 ttccagtctg ccagaagggc ctgagcggcc ccattgagga ttcctgagat ctcccggccg
     2761 tcgttgggga tcaccaggtc cgcatggagc gcccgctcgg gggggctcgc ctgggcgcgg
     2821 agccgggcca gggcggcgtc gcggtcgagg ccatcccggg ccaccagccg ctccaggcgg
     2881 agttcctcgg gcgcgtccac ggtccagaat gcgtcgaagt ggtgggcctt cccccgctcc
     2941 acccagagcg cggcatccag cacggccccg cgggtggcgg gcgggagcgc cgccaggcgg
     3001 gcggcgagca gggcttcgat gcgcggatgg aggatcgcgt tcaggtgggc gcgggccgga
     3061 tcgctggaaa acacatgggc cgccatccag gcgcgatcca gggcgccatc ggggcggagg
     3121 caggtggggc cgaaggcggc caccagggcg gccaggcctt cgctgcccgg ctgcaccgct
     3181 tcccgggcca gggcgtccgc atcgatgacc gcccagccat ggccggccag ctgctttgcc
     3241 acgaagctct tccccgccgc gatgccgccg ctgaggccga ggatggggaa gggcgtggtg
     3301 tgcatgggga ggcgtgggcg gccaaagggg atatgcgggt tgttccggcg cagagagtgt
     3361 gtcacaaagg ttcgcaaacc ccatccacca aggtctccat gctaaagcct ctcgcgcttg
     3421 ccctcctttt gcccgccgcc tatatccttg ctgcggattg ggcctccatc acacccgatg
     3481 tgtgggccat ccggtccggc cccaagggtg ccgtgatcct tgaggaccgg atgcggttca
     3541 aggtgacctc gatcgagtac gtctaccggg tgcgcgtgtt cgccgacgag ggacggtctg
     3601 ccgccgagat ccccgacctg cccgccacgg ccttcgatat caaggggcgc acggtctatc
     3661 ccgatggccg tcaggtcgtg ttcaacagcc gcaaggactt cgcggaacgg aaggtggatg
     3721 tgggcggctc ggaaacacgg gcgaagcacc ttgtggctcc gggcgtcact cc
//
LOCUS       DASUDT010000036         3392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1393814, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000036 DASUDT010000000
VERSION     DASUDT010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393814"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFV26_00815"
     CDS             complement(<1..470)
                     /locus_tag="VFV26_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4844726.1"
                     /translation="MAKTSPLFECTACGARHPKALGKCTACGAWDSVQEVRGTLKRDL
                     QRAGSAYAQSHYTGPIALPDVEVTDAQRSPTGLAELDRVLGGGVVPGMVALLGGEPGI
                     GKSTLLLQWAATTQGTVLYASGEESERQIKLRAQRLGAENPGIHLLAETDVRRIL"
     gene            complement(470..868)
                     /locus_tag="VFV26_00820"
     CDS             complement(470..868)
                     /locus_tag="VFV26_00820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEX4844727.1"
                     /translation="MNQAPIRVVIAKPGLDGHDRGAKVVARALRDAGMEVIYTGLRQT
                     PQQIVAAVVQEDARVLGMSILSGAHNQIFPEVLRLLKAQGADDVLVFAGGIIPDEDVP
                     ALKAAGIREIFQPGTNTDDIVAFIQREVRA"
     gene            complement(877..1332)
                     /locus_tag="VFV26_00825"
     CDS             complement(877..1332)
                     /locus_tag="VFV26_00825"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEX4844728.1"
                     /translation="MFHIILHQPEIPQNTGSIGRLCVNNGAKLHLIHPLGFETTDYYL
                     RRAGLDYWEKLDPTHYADWNDFLARNPARRLWFFSTKGARRHTQVPWAYGDGLVFGQE
                     TKGLPDDLLAAYPDQLVRIPMLGDHHRSLNQAQAAAIGLYEALRQTEGW"
     gene            1343..1702
                     /locus_tag="VFV26_00830"
     CDS             1343..1702
                     /locus_tag="VFV26_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX4844729.1"
                     /translation="MSAATSECLFCKIARKEIPAALVYEDDSLLAFKDIFPQAPVHLL
                     IIPKAHCAGLADMTPDIAAAAGRVPQVAARLAEEHGVAASGWRLLANCGPDSGQTVFH
                     LHFHLLGGKPLGGKLCL"
     gene            1943..2395
                     /locus_tag="VFV26_00835"
     CDS             1943..2395
                     /locus_tag="VFV26_00835"
                     /inference="COORDINATES: protein motif:HMM:NF014439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844730.1"
                     /translation="MDEKGRLKLPSSFKAELETFAQGEGDGGLREGVPALRHYLTSLD
                     GRSARLYPLPVWEAIEARLAALPSTNPAKRKFLETTAYFGSEVEPDAQGRFVIPPILR
                     EAAQLTGEVAVLGQMDHLALWNKAGFQRRLAAEPLGADDLAQLADLGI"
     gene            2395..3354
                     /gene="rsmH"
                     /locus_tag="VFV26_00840"
     CDS             2395..3354
                     /gene="rsmH"
                     /locus_tag="VFV26_00840"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:TIGR00006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX4844731.1"
                     /translation="MTTIPVHVPVLLQEVLDSLALPPGARILDLTLGLGGHAEALLGR
                     CDKASRYLGVDRDPEARYLARRRLGDDSRLEILAGNYEDIWSDPLFLDWAGTHAPGGF
                     DAILADLGVSTLQLRSPERGFSFRDEGPLDMRMDTTSGPTALEWIAEQTDESLADAIY
                     QYGEERASRPIARAILRAHGEGRLATTKDLAEAVYTVIPREPAKRKGHSDPATRTFQA
                     IRIAVNGELDRLAAALEAAVSHLSPGGRLGVISFHSLEDRIVKQTLRRLAGLYDGPGR
                     VAPAVLPKVVKLIHPGGLAPSEAEASANPPSRSARLRVAERLP"
BASE COUNT          486 a         1221 c         1130 g          555 t
ORIGIN      
        1 aggatgcgcc gcacgtccgt ttccgcgagc aggtggatgc cggggttctc cgcgcccagg
       61 cgctgggcgc gcagcttgat ctggcgctcg ctctcctcgc cgctggcgta gagcacggtg
      121 ccctgggtgg tggcggccca ctggagcagc agggtggact tgccgatgcc cggctcgccg
      181 cccagcaggg ccaccatgcc cggcaccacg ccgccgccca gcacccggtc cagctccgcg
      241 aggcccgtgg ggctgcgctg ggcgtccgtg acttccacat ccggcagggc gatgggcccc
      301 gtgtagtggc tttgcgcgta ggcggagccc gcccgctgga ggtcgcgctt gagggtgccg
      361 cgcacctcct gcacgctgtc ccaggcgccg caggccgtgc acttgcccag ggccttggga
      421 tgccgggccc cgcaggccgt gcattcgaac aggggcgagg tcttcgccat caggcacgga
      481 cctcgcgctg gatgaaggcc acgatgtcgt cggtgttggt gccgggctgg aagatctccc
      541 ggatgccggc ggccttgagg gccggcacgt cctcgtcggg gatgatgccg ccggcgaaga
      601 ccagcacatc gtccgcgccc tgggccttca ggaggcgcag cacctcgggg aagatctggt
      661 tgtgggcgcc gctgaggatg ctcatgccca gcacccgggc gtcctcctgc accacggcgg
      721 ccacgatctg ctggggcgtc tggcgcaagc ccgtgtagat gacttccatg cccgcatcgc
      781 gcagggcgcg ggccacgacc ttggcgccgc ggtcatgccc gtcgaggccg ggcttggcga
      841 tgacgacgcg gatgggtgcc tggttcatgg gaactcctac cagccctcag tctgccgcag
      901 cgcctcgtaa aggccaatgg ctgccgcctg ggcctggttc aggctgcgat ggtggtcgcc
      961 cagcatggga atgcgcacca gctggtcggg gtaggcggcc agcaggtcat cgggcagccc
     1021 cttggtctcc tgcccgaaga ccaggccgtc gccgtaggcc cagggcacct gggtgtggcg
     1081 ccgggccccc ttggtgctga agaaccagag ccgccgggcg ggattccgcg ccaggaagtc
     1141 gttccagtcg gcgtagtgcg tgggatccag cttctcccag tagtccagcc cggccctgcg
     1201 caggtagtag tcggtggtct cgaagcccag ggggtggatc aggtgcagct tcgcgccgtt
     1261 gttgacgcag aggcggccga tgcttccggt gttctgcgga atctcgggct ggtgcaagat
     1321 gatgtggaac atgggggtcc tgatgagcgc cgctacgagc gaatgcctgt tctgcaagat
     1381 cgcgcggaag gagatccccg ccgccctagt gtacgaagat gacagcctgc tcgccttcaa
     1441 ggacatcttt ccccaggcgc cggtccacct gctgatcatt ccgaaagccc actgtgcggg
     1501 gctggcggac atgacccccg acatcgccgc cgcggccgga cgggtccccc aggtcgcggc
     1561 aaggctggcc gaggaacacg gggtcgccgc cagcggctgg cgcctgctgg ccaactgcgg
     1621 ccccgattcc ggccagaccg tcttccacct gcacttccac ctgctggggg ggaagcccct
     1681 gggcgggaag ctctgcctct aagctgacgt tttcaccttc tttccctatt tagcgaaaaa
     1741 gacacgcctt tgcgtgtctt tttcgttttt atttccgctt gttgctttcc cgggtctttc
     1801 tagactttga agtggttctc agtggagaaa agtggattga agtggatttc agtggtctca
     1861 cttcctttcc ttcggtctct cctgggtgac tggttgaaag gcgttaccgg tgctccgact
     1921 tcgcggaaac tcaccggcca cggtggatga gaagggccgt ctgaagctcc cctcctcctt
     1981 caaggccgag ctcgaaacct tcgcccaggg cgagggggac ggcggtctgc gggagggtgt
     2041 tccggccctg cggcactacc tgacctccct ggatggccgc tccgcccgcc tctaccccct
     2101 gccggtctgg gaggccatcg aggcccgcct ggcggccctg ccgtccacca acccggccaa
     2161 gcgcaagttc ctggagacca ccgcctactt cggcagcgaa gtggagcccg acgcccaggg
     2221 ccgcttcgtc attccgccca tcctgcgcga ggccgcccag ctcacgggcg aggtggccgt
     2281 gctggggcag atggaccacc tggccctgtg gaacaaggcc ggcttccagc gccgcctggc
     2341 cgccgagccc ctgggcgccg acgacctggc ccagctcgcg gatctgggga tctgatgacg
     2401 acgatccccg tccatgtccc cgtgctgctc caggaggtcc tggacagcct ggcgctgcct
     2461 ccgggtgccc gcatcctcga cctcaccctg ggcctgggcg gccacgccga ggccctgctg
     2521 ggccgctgcg acaaggcctc ccgctacctg ggcgtggacc gtgacccaga ggcccggtac
     2581 ctggcccgcc gccgcctggg cgacgacagc cgcctggaga tcctggcggg gaactacgag
     2641 gacatctgga gcgatcccct gttcctagac tgggccggaa cccatgcgcc cgggggcttc
     2701 gacgccatcc tggcggacct gggcgtctcc accctccagc tccgcagccc cgagcgcggc
     2761 ttcagcttcc gggacgaagg tcccctcgac atgcggatgg acaccacctc cggccccact
     2821 gccctggaat ggatcgcgga gcagaccgac gaaagcctgg ccgacgcgat ctaccagtac
     2881 ggcgaagagc gcgccagccg gcccatcgcc cgcgccatcc tccgcgcgca cggcgaaggc
     2941 cggctggcca ccaccaagga cctggccgag gccgtctaca cggtcatccc ccgggagccg
     3001 gccaagcgga aggggcacag cgatcccgcc acccgcacgt tccaggccat ccgcatcgcc
     3061 gtgaacggcg agctggaccg cctggccgcc gccctggaag ccgccgtctc gcacctcagc
     3121 cccggcggac gcctgggcgt catcagcttc cacagcctgg aggaccgcat cgtcaagcag
     3181 accctgcgcc gcctcgcggg cctctacgac ggtcccgggc gcgtggcgcc agccgtcctc
     3241 cccaaggtcg tgaagctcat ccatcccggc ggcctcgccc ccagcgaggc tgaggcctcc
     3301 gccaatcccc cctcccgctc cgcccgcctg cgcgtggctg agcgtctccc ctgatcgagg
     3361 tatccatggc caccggaacc ctgccgagcc cc
//
LOCUS       DASUDT010000037         3734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2078570, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000037 DASUDT010000000
VERSION     DASUDT010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078570"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..1123
                     /locus_tag="VFV26_00845"
     CDS             155..1123
                     /locus_tag="VFV26_00845"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003872 - 6-phosphofructokinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX4844732.1"
                     /translation="MKIGVLTSGGDAPGMNAAIRAAVRQADALGHEVWGIRRGYEGLL
                     EGDWAPMPSRACANILQRGGTVLHTARCPEFFKPERRAEAAAKLRLAGIGALVVIGGD
                     GSFRAAETLQREHGILCAGIPGTIDNDLPGTERTLGFDTALNTAVEAIDRIRDTASSH
                     GRLFLVEVMGRSSGTLAVHTALACGAEAVLYPESPDDSYGALVARLHANWLRGKRSSI
                     VVVAEGDDLGSAVAVGERLRREHGLDLRVVVLGHIQRGGSPSALDRIWGSRWGAEAVR
                     RLDAGESGFYLGEMAGALAVLPMARVLGAHPAPPDDLGELVDILSR"
     gene            1403..2431
                     /locus_tag="VFV26_00850"
     CDS             1403..2431
                     /locus_tag="VFV26_00850"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanylyltransferase"
                     /protein_id="HEX4844733.1"
                     /translation="MAGGRGTRFWPRSRNARPKQFLAIVGAETLLHQTVRRLDGHVPP
                     EHIFVVTTEDLAAETRRMLPELPPENVLVEPEGRNTAPCLALALVQIERKFPQAVMAV
                     LSADHWIGDRELFLEDLDTAVKHAAWERELVTFGIRPTYPETGYGYIESEGHGPVLKV
                     RAFREKPPVEVAMQYLESGRHYWNAGMFVWTLADFREGLMKHAPEVLAPLDAWVKAGA
                     DPAALSAAYRQLPKLAIDVALMERAEAVAVVPTRFRWSDVGSWPAAIEFQETDAEGNV
                     SQGETLLLDTRNSAFFGGKRLIAASGVDDLIVVDAEDALLICHRDRAQTVKQIVERLK
                     AEGREDLL"
     gene            2622..2981
                     /locus_tag="VFV26_00855"
     CDS             2622..2981
                     /locus_tag="VFV26_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannose isomerase type II C-terminal
                     cupin domain"
                     /protein_id="HEX4844734.1"
                     /translation="MDRPTTLHVDKPWGSFDQYALNTPCTVKILTCNPGQKLSLQRHA
                     HRGELWVALDPGVVVDRDGAELRPGVGEEIWLPQGSTHRLRCDAATAHPVRVLEVSLG
                     AFDEADIERLQDDYGRR"
     gene            2981..3667
                     /locus_tag="VFV26_00860"
     CDS             2981..3667
                     /locus_tag="VFV26_00860"
                     /inference="COORDINATES: protein motif:HMM:NF028441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein-sorting protein"
                     /protein_id="HEX4844735.1"
                     /translation="MRAAILLLAALPGLAQSGEEILARVDRLRHPWPTFTVELTVKDA
                     KASQRWKVSARENGDARLDGLSGKEKGRAVLLRGDQMWLLLPGTRRPVKVTPQQRLMG
                     PAAGGDVARTRFREDYTVQALAEATLDDRACWRLELVAKRPALSARHVSLWVVKEGVL
                     PLKAEFRLASGRLARTAHFGPPGEAHGQAVLSGMALEESSGGRVELAFGHWTRGGVAP
                     AAFELPGEDR"
BASE COUNT          555 a         1253 c         1380 g          546 t
ORIGIN      
        1 tcgagccgcc gcccctgccg ccgccggaag cccacgtgaa ggacctgcgg aaggcccggc
       61 gggccaaggg ccgggtcgcc cggaaaaagg gcaaagcggc gtccgtgaag ggggccgtgt
      121 cccggcccaa ggccccggcc aggcggaaag ccaaatgaag atcggcgtcc tcacctccgg
      181 cggggacgca ccgggcatga atgccgccat ccgcgcggcg gtgcgccagg ccgacgccct
      241 ggggcacgaa gtctggggca tccgccgagg ctacgaaggg ctgctggagg gggactgggc
      301 gcccatgccc agccgggcct gcgccaacat cctgcagcgg ggcggcacgg tattgcacac
      361 ggcccggtgt ccggagttct tcaagccgga gcggcgggcg gaggccgcgg cgaaactgcg
      421 gctggcgggc atcggggccc tggtggtgat cggcggggac ggcagcttcc gcgccgccga
      481 gacgctccag cgggagcatg gcatcctctg cgcgggcatc cccggcacca tcgacaacga
      541 cctgccgggc accgaacgca ccctgggctt cgacacggct ctgaacacgg cggtggaggc
      601 catcgaccgc atccgggaca cggcctccag ccatgggcgc ctcttcctgg tggaagtcat
      661 ggggcgcagc tccggcacgc tggcggtcca cacggccctg gcctgcggcg ccgaggcggt
      721 gctctacccc gaatcgcccg acgattccta tggggcgctg gtggcgcgcc tgcatgccaa
      781 ctggctccgc ggcaagcgca gctccatcgt ggtggtggcc gagggggacg acctgggcag
      841 cgctgtggcc gtgggcgagc gcctgcgccg ggagcacggg ctggatctgc gcgtggtggt
      901 gctcggccac atccaacgcg ggggaagccc ctcggcgctg gaccgcatct ggggcagccg
      961 ctggggcgcc gaagccgtgc gccgcctgga cgccggggag agcgggttct acctggggga
     1021 gatggccggg gccctggcgg tgctgcccat ggcgcgggtt ctcggtgccc atcccgcgcc
     1081 cccggatgac ctgggggagc tcgtggatat cctgtcgcgg tagcctgtgg ggctggagga
     1141 ggcgtgatgc cggatacgag cagtcatcca tccctggtcg cggtcattat ctcggtatcg
     1201 cctgcggcga tacgcgagac ctcccgcgtt tgggcggaac agaaggaagc atgatgccgg
     1261 atacgagcag tcatccatcc ctggtcgcgg tcattatctc ggtatcgcct gcggcgatac
     1321 gcgaggcctc ccgcgtttgg gcggtcagga ggggggcgtg atgccgggca cggatcgtca
     1381 tccaaccctg gtcgcggtca ttatggccgg gggccgcggc acccggttct ggccccgcag
     1441 ccgcaatgcg cgtcccaagc agttcctggc catcgtgggc gccgagaccc tgctgcacca
     1501 gaccgtgcgg cgcctggacg gccacgtgcc ccccgagcac atcttcgtgg tgaccacgga
     1561 ggacctggct gccgagacgc ggcgcatgct gcccgagctg ccgccggaaa atgtgctcgt
     1621 cgagcccgag ggacgcaaca ccgcgccctg cctggccctg gccctggtcc agatcgaaag
     1681 gaagttcccc caggccgtca tggcggtgct gtccgcggac cactggatcg gcgaccggga
     1741 gctgttcctc gaggacctgg acaccgctgt gaagcacgcg gcctgggagc gggagctggt
     1801 caccttcggc atccggccca cctatcccga gacgggctac ggctacatcg aatccgaagg
     1861 gcacggcccg gtgctgaagg tgagggcctt ccgcgagaag ccccccgtgg aagtggcgat
     1921 gcagtacctc gagtccggcc gccactactg gaatgccggc atgttcgtgt ggaccctggc
     1981 ggatttccgc gaagggctca tgaagcatgc cccggaggtg ctggcccccc ttgatgcctg
     2041 ggtgaaggcc ggggccgatc cggcggccct ttccgccgcc taccggcagc tccccaagct
     2101 cgccatcgac gtggccctca tggagagggc cgaggcggtg gccgtggtgc ccacgcgctt
     2161 ccgctggtcg gatgtgggtt cctggcccgc cgccatcgag ttccaggaga ccgatgcgga
     2221 aggcaacgtg agccagggcg agaccctgct gctggacacc cggaacagcg ccttcttcgg
     2281 tggcaagcgc ctcatcgccg ccagcggcgt ggatgacctc atcgtggtgg atgccgagga
     2341 cgccctgctc atctgccatc gcgaccgcgc ccagaccgtg aagcagatcg tggaacggct
     2401 caaggccgaa ggccgcgagg atctgctcta aggctggagt ctggaggtac ggcttcctgt
     2461 ggcgcccctt cgggggcgct gctttgtttg gccttgggtc cgttcctgtc caatgggcat
     2521 gcggcgccaa aggaagatgt tcgccgcggc catccggccg cccagagagc agtacctgcg
     2581 gtctccagac tccggtctcc agacttgata agctgtctcc catggaccga ccgaccaccc
     2641 tccacgtcga caagccctgg ggctccttcg atcagtacgc cctgaacacg ccctgcacgg
     2701 tgaagatcct cacctgcaac cccggccaga agctgagcct gcagcggcat gcgcaccgcg
     2761 gcgagttgtg ggtggccctg gatccggggg tggtggtgga tcgcgacggc gcggaactgc
     2821 ggcccggcgt gggggaggag atctggctgc ctcagggcag cacccaccga ctgcgctgcg
     2881 acgccgccac ggcccacccc gtgcgggtgc tggaggtgag cctcggcgcc ttcgatgagg
     2941 ccgatatcga gcggctccag gacgactacg ggcgccgctg atgcgcgccg cgatcctgtt
     3001 gctggccgcc ctgccgggcc tggcccagag cggcgaggag atcctcgccc gggtggaccg
     3061 gctgcgccat ccctggccca cgttcaccgt ggagctgacg gtgaaggatg cgaaggccag
     3121 ccagcggtgg aaggtatcgg cccgggagaa cggcgatgcc cggctggatg gcctttccgg
     3181 gaaggagaag ggccgcgccg tgctgctgcg gggcgatcag atgtggctgc tgctgccggg
     3241 cacgaggcgg ccggtgaagg tcaccccgca gcagcgcctg atggggcctg cggcgggcgg
     3301 ggacgtggcc cgcacaaggt tccgtgagga ctacaccgtg caggcgctgg cggaggccac
     3361 gctggatgac cgggcctgct ggcgcctgga gctggtggcg aaacgcccgg ccctcagtgc
     3421 ccgccacgtg agcctgtggg tggtgaagga gggggttctg cccctgaaag cggagttccg
     3481 cctggcctcc ggccggctgg cccgcacggc gcacttcggc cctccgggcg aggcccacgg
     3541 ccaggcggtg ctgtcgggga tggcgctgga ggaatccagc gggggcaggg tcgagctggc
     3601 cttcggccac tggacccggg gcggcgtggc gcccgcggcc ttcgagctgc ccggagagga
     3661 ccggtgatag actggtaggc gaggtgcccg agagggcttc ccgccaccaa ccatcccacc
     3721 acttgacacc agtt
//
LOCUS       DASUDT010000038         2429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1283340, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000038 DASUDT010000000
VERSION     DASUDT010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283340"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2416)
                     /locus_tag="VFV26_00865"
     CDS             complement(<1..2416)
                     /locus_tag="VFV26_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tex-like N-terminal domain-containing protein"
                     /protein_id="HEX4844736.1"
                     /translation="MLDLMAKELKLPRAGVAAIVALLEEGNTVPFIARYRKEATGSLD
                     EVAIRNVEDRHAYYKDLLDRRKTVLKSIDEQGKLTPELKAKIETTWVKAELEDLYLPY
                     KPKKRTKATVARERGLEPLLDSLLADESGADPFLIAEPFIKDEDGLRAPSECLEGAGH
                     ILAERLTEDAAIRAWLRLEFHEQGVLKSEIREERKADQAALRFKPYFDFSEPIRKIPS
                     HRLLALRRGEKEEILTVKLLVERENLVSQLVSKVQIASGSGYRRFLNEVAGDAFDRLL
                     APAIESEVRYEAKKKADGEAIKVFQTNLDHLLLAPPAGQRCTLGVDPGIRTGCKLVVI
                     NRLGQLVQNEVIYPLEPKRDLEGSRAILEKLCTGNPIEAIAIGNGTGGREVEAFIREW
                     LRETNRTGLICVSVSEAGASVYSASDIAREEFPEHDVTVRGAVSIARRFQDPLAELVK
                     VDPKSIGVGQYQHDVNQTALKKGLDDVVESCVNRVGVDLNSASYKLLAYVAGIGEGLA
                     KNIVAHRFEHGAFKRREQLLEVGRFGAKAFQQAAGFLRIHEGEDPLDASAVHPESYPV
                     VQRICQLAGKTVSELIGNDAVLDSLDPKLFVDEKAGLETVKDILAELKKPGRDPRHRF
                     EVVQFREGVNKPSDLEVGMDLQGIVTNVTDFGAFVDVGVHQDGLVHLSEIAHRYVKNP
                     ADALSVGQAVKVKVLAVDLEAKRIALSIKALLAAPEGADKPQQHHRRPGPRPPRPQGG
                     PQAGPQTGARPQGPRPPRTDGPRPPRPEGPRPPRQEGPRPPRPQEARPPRPEREARPP
                     QPKREPS"
BASE COUNT          303 a          787 c          907 g          432 t
ORIGIN      
        1 ccgagggctc gcgcttgggc tggggcggcc gggcctcccg ctcgggcctg ggcgggcggg
       61 cctcctgggg gcgcgggggc cgggggccct cttgccgggg gggacgcgga ccttccggcc
      121 gggggggccg gggaccgtca gtccggggcg ggcggggccc ctgggggcgg gcgccggtct
      181 ggggtccagc ctggggcccg ccctggggcc ggggcggccg ggggccgggg cggcgatggt
      241 gctgctgggg cttgtcggcg ccttcggggg cggccagcag ggccttgatg gacagggcga
      301 tgcgcttggc ctccaggtcc acggccagca ccttcacctt cacggcctgg cccacgctga
      361 gggcgtccgc ggggttcttc acgtagcggt gggcgatctc ggaaaggtgc acgaggccgt
      421 cctggtggac gccaacatcc acgaaggcgc cgaagtccgt cacgttcgtg acgatcccct
      481 ggaggtccat gcccacttcc agatcgctgg gcttgttcac gccctcgcgg aactgcacca
      541 cctcgaagcg gtggcgggga tcgcggccgg gcttcttcag ctcggccagg atgtccttca
      601 cggtctccag gccggccttc tcgtccacga agagcttggg gtccaggctg tccagcacgg
      661 cgtcgttgcc gatgagctcg gagacggtct tgcccgccag ctggcagatg cgctgcacca
      721 cagggtagct ctccggatgc acggcggagg cgtcgagggg atcctcgcct tcgtgaatgc
      781 ggaggaagcc cgcggcctgc tggaaggcct tggcgccgaa gcggccgacc tccaggagct
      841 gctcccggcg cttgaaggcg ccgtgctcga agcggtgggc cacgatgttc ttggccagcc
      901 cctcgccgat gcccgccacg taggccagca gcttgtagga ggcgctgttg aggtccacgc
      961 ccacgcggtt cacgcagctt tcgaccacgt catccaggcc cttcttgagg gcggtctggt
     1021 tcacgtcgtg ctggtactgg cccacgccga tgctcttggg gtccaccttc accagctcgg
     1081 ccagggggtc ctggaagcgg cgggcgatgc tcacggcgcc gcgcacggtg acgtcatgct
     1141 ctgggaactc ctcccgggcg atgtcgctgg cggaatacac cgaggcgccg gcctcgctca
     1201 cgctcacgca gatgaggccc gtgcggttcg tttcgcgcag ccactcgcgg atgaaggcct
     1261 ccacttcgcg gccgccggtg ccgttgccga tggcgatggc ctcgatggga ttcccggtgc
     1321 agagcttctc gaggatggcg cggctgccct ccaggtcccg cttgggctcc aggggataga
     1381 tgacctcgtt ctgcaccagc tggcccaggc ggttgatgac cacgagcttg cagcccgtgc
     1441 ggatgccggg gtccacgccg agggtgcagc gctggcccgc ggggggcgcc agcagcaggt
     1501 ggtccaggtt cgtctggaag accttgatgg cctcgccgtc ggccttcttc ttggcctcgt
     1561 agcgcacttc ggattcgatg gcgggggcca gcagccggtc gaaggcgtcg ccggcgactt
     1621 cgttcaggaa ccggcggtag ccgctgccgg aggcgatctg caccttggag acgagctggc
     1681 tcaccaggtt ctcgcgctcc accaggagct tcacggtgag gatctcctcc ttctcgccgc
     1741 ggcggagggc caacaggcgg tggctgggga tcttgcggat gggttcggag aagtcgaagt
     1801 agggcttgaa gcggagcgcg gcctggtcgg ccttgcgttc ttcgcggatt tcggatttca
     1861 gcacgccctg ctcatggaat tcgaggcgca gccaggcgcg gatggccgcg tcctccgtca
     1921 gccgctcggc caggatgtgg ccggcgccct cgaggcattc cgacggggcg cgcaggccgt
     1981 cctcgtcctt gatgaagggc tcggcgatga ggaaggggtc ggcgccgctc tcgtcggcca
     2041 gcagggaatc cagcaggggc tccaggccgc gctcccgggc cacggtggcc ttggtgcgct
     2101 tcttgggctt gtagggcagg tagaggtctt ccagctcggc cttcacccag gtggtctcga
     2161 tcttggcctt cagctcgggg gtgagcttgc cctgctcgtc gatggatttc aggacggtct
     2221 tgcggcggtc cagcaggtcc ttgtagtagg cgtggcggtc ttccacgttg cggatggcca
     2281 cttcgtcgag ggagccggtg gcctccttcc ggtaccgggc gatgaagggg actgtgttgc
     2341 cctcctccag cagcgccacg atggcggcca cgcccgcgcg ggggagcttg agctccttgg
     2401 ccatgaggtc gagcacctga tccacactt
//
LOCUS       DASUDT010000039         3387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1901812, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000039 DASUDT010000000
VERSION     DASUDT010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1901812"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1501)
                     /locus_tag="VFV26_00870"
     CDS             complement(2..1501)
                     /locus_tag="VFV26_00870"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEX4844737.1"
                     /translation="MSLTPSQWAALLPLLLPALGACLIPLMALDKDQATAKWIRGVMY
                     GTALLAVAASFWYLTDLWKTGAQPSFFQLRMDRLAQFSGIFVVVAAALTILQSWDHFH
                     QEGWVKGETLSLLLFSVTGMMLFTASTHFVTLFLGLELFSIPLYALVGTVRARPESAE
                     GGMKYFLTGAVASSCFLMGGVLIYGLSGTLDLSAAAGVLKAQGLALDPLALTGAALLL
                     LGFLFKVSAVPFHQWTPDAYEASPHPIAGFMSVATKGVAFIALLRIFPGSLAPLTAVG
                     AKMQAVAAVLAVATLVLGNLTALVQSNVKRMLAYSSISHAGYLMLGFVAGTPAAHTGV
                     LFYLVIYLAMNMGAFGLLTAFGLVGEKTTFEDLRGLGWKRPAMGFAAAVFMLSLAGIP
                     PMGGFYGKYMIFRELVATGHVGMAVLGVLASLVSAYYYLRFLVALFLQAPSAEAERLA
                     SDRPAVHAPLAGATVLVCAAIVLAGGFLQFALVDGFAKRALVEGLGLIR"
     gene            complement(1498..3093)
                     /locus_tag="VFV26_00875"
     CDS             complement(1498..3093)
                     /locus_tag="VFV26_00875"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX4844738.1"
                     /translation="MTWLNLHPLSFLVFAPALLGLLLMALPHALGKLARMLGFLGALA
                     IFALSLAWLLVPGQAGTVIAEHAPWFTLVGLPVDYALAVDGLNLWLVILTTFLVPLTM
                     LGTWNSLKDRIGTFVAMFLLLETGMLGALMAQDLFVFYLFWEAMLIPMYFMIGVWGGD
                     ERRYAANKFFLYTLSGSLLWLVALLYLANKAGGFNPALMAQAASALPFNVQGWLFIAF
                     AVAFAIKVPLFPLHTWLPDAHVQAPTAGSVILAGVLLKLGGYGFIRFAIPIFPQAAMH
                     YAQPIALLSVIAIVYGALVAMVQRDIKKLVAYSSVSHMGFVMLGLASMTVIGTQGAML
                     QMLNHGISTGALFLLVGMLYDRAHTRMIADFGGVAVKMPIFTTFFLIVTLSSIGLPLT
                     NGFVGEFWILNGTFVSGFPWGRLYACLATSGVLLGAVYMLWMFMRVFWGPENKDEDSG
                     THHLHSDLNAREIAVMLPLVVLIVWMGVHPKTFVAASEAPVTALLQDIKAPAPRTFVL
                     KPAVHEAPAAHAPEAPAAHEVHR"
     gene            complement(3102..>3387)
                     /locus_tag="VFV26_00880"
     CDS             complement(3102..>3387)
                     /locus_tag="VFV26_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX4844739.1"
                     /translation="AFAAKFPFLHNLLLNKYYVDEGVELYILRPIRWFGNVLWKLFDV
                     IIIDGVGVNLPGALARVFGDFTALFQTGRVRNYALSMALGAAVLLYVFLK"
BASE COUNT          648 a         1045 c         1260 g          434 t
ORIGIN      
        1 cctagcggat caggccgagg ccttccacca gggcccgctt ggcgaagcca tccaccaggg
       61 cgaactggag gaagccacct gccaggacga tggccgcgca gaccagcacc gtggcgccgg
      121 ccaggggcgc gtggaccgcc ggacggtccg aggccaggcg ttcggcctcg gcactggggg
      181 cctgaaggaa gagggccacc aggaagcgca ggtagtagta tgcggacacg aggctcgcca
      241 gcacgcccag gacggccatg cccacgtggc ccgtggccac cagctcgcgg aagatcatgt
      301 acttgccgta gaagccgccc atggggggga tgcccgccag gctgagcatg aacacggcgg
      361 cggcgaagcc catggcgggc cgcttccagc ccaggccgcg cagatcctcg aaggtggtct
      421 tctcgcccac caggccgaag gccgtgagca gcccgaaggc gcccatgttc atggcgaggt
      481 agatgaccag gtagaacagc acgccggtgt gggcggcggg cgtgcccgcc acgaagccca
      541 gcatgaggta gcccgcgtgg ctgatgctgg agtaggccag catgcgcttc acgttggact
      601 ggaccagggc cgtgaggttg ccgagcacca gggtggccac ggccagcacg gcggccaccg
      661 cctgcatctt ggcgcccacg gccgtcaggg gtgcgagact gccggggaag atgcggagca
      721 gggcgatgaa ggccacgccc ttggtggcca cggacatgaa gcccgcgatg ggatggggcg
      781 aggcctcgta ggcgtccggc gtccactggt ggaagggcac agcggagacc ttgaagagga
      841 agcccagcag caggagggcc gccccggtga gcgccagcgg atccagggcc aggccctggg
      901 ccttgagcac cccggccgcg gcgctcaggt ccagcgtgcc gctcaggcca tagatcagca
      961 cgccacccat gaggaagcag ctggaggcca cggcccccgt gaggaagtac ttcatgccgc
     1021 cttcggcgct ttccggccgg gcccgcacgg tgcccaccag cgcgtagagg gggatgctga
     1081 agagttcgag gcccaggaag agggtcacga agtgggtgct ggcggtgaag agcatcatgc
     1141 ccgtcacgga gaagagcagc agggagaggg tctcgccctt cacccagccc tcctggtgga
     1201 agtggtccca gctctggagg atggtgaggg ccgcggccac caccacgaag atgccggaaa
     1261 actgggccag gcggtccatg cgcagctgga agaagctggg ctgggcgccg gtcttccaga
     1321 ggtccgtcag gtaccagaag ctggccgcca ccgccagcag ggccgtgccg tacatgacgc
     1381 cgcggatcca cttggcggtg gcctggtcct tgtcgagggc catgaggggg atcaggcagg
     1441 cgcccagggc cgggaggagc agcggcagca gggccgccca ctggctggga gtgaggctca
     1501 tcggtgcacc tcatgggcgg cgggggcttc gggggcgtgg gccgccggag cttcatggac
     1561 cgcaggcttc aggacgaagg tccggggcgc cggggccttg atgtcctgga gcagcgccgt
     1621 gacaggggct tcgctggcgg ccacgaaggt cttggggtgg acgcccatcc acacgatgag
     1681 caccaccagg ggcagcatca cggcgatttc acgggcgttc aggtcgctgt gcaggtggtg
     1741 ggtgccgctg tcctcgtcct tgttctcggg gccccagaag acccgcatga acatccacag
     1801 catgtagacc gcgcccagca gcacgccgga ggtggccagg caggcgtaga ggcggcccca
     1861 ggggaagccc gagacgaagg tgccattcag gatccagaac tcgcccacga acccgttggt
     1921 gaggggcagg ccgatggagc tcagcgtcac gatgaggaag aacgtggtga agatgggcat
     1981 cttcacggcc acgccgccga agtcggcgat catgcgcgtg tgggcccggt cgtagagcat
     2041 gcccaccagg aggaagagcg cgccggtgct gatgccgtgg ttgagcatct ggagcatggc
     2101 gccctgggtg ccgatgacgg tcatggaggc gagccccagc atcacgaagc ccatgtggct
     2161 cacggaggag taggccacca gcttcttgat gtcgcgctgg accatggcca ccagggcccc
     2221 gtagacgatg gcgatgacgc tcagcagcgc gatgggctgc gcgtagtgca tggccgcctg
     2281 ggggaagatg gggatggcga agcggatgaa gccgtacccg cccagcttca gcagcacgcc
     2341 ggccaggatc acggaacccg ccgtgggcgc ctgcacgtgg gcgtccggca gccaggtgtg
     2401 cagcgggaac agcggcacct tgatggcgaa ggccacggcg aaggcgatga acagccaccc
     2461 ctggacattg aagggcagcg ccgaggcggc ctgggccatg agggccgggt tgaagccccc
     2521 ggccttgttg gccaggtaga gcagcgccac cagccagagc agcgatccgc tcagggtgta
     2581 gaggaagaat ttgttggccg cgtagcggcg ctcatcgccg ccccagaccc cgatcatgaa
     2641 gtacatcggg atgagcatgg cctcccagaa caggtagaac acgaacaggt cctgagccat
     2701 cagggcgccc agcatgcccg tctccagcag gaggaacatg gccacgaagg tgccgatgcg
     2761 gtccttgagg ctgttccagg tccccagcat ggtgaggggc accaggaagg tggtgaggat
     2821 caccagccag aggttcaggc cgtccacggc cagggcgtag tccaccggca ggcccaccag
     2881 ggtgaaccag ggagcgtgct cggcgatcac cgtgcccgcc tgtccgggaa ccagcagcca
     2941 ggccaggctg agggcgaaga tggcgagggc gcccaggaag ccgagcatgc gggccagctt
     3001 gcccagggcg tgcggcaggg ccatcagcag gaggcccagc agggccggcg cgaagaccag
     3061 gaaggagagg ggatggaggt tcagccaggt catcgcccca cctacttcag gaagacatag
     3121 aggaggaccg cggcccccag cgccatgctg agcgcgtagt tgcgcacccg gcccgtctgg
     3181 aagagggcgg tgaagtcccc gaagacccgg gccagcgcgc ccggcaggtt cacgcccacg
     3241 ccgtcgatga tgatcacgtc gaagagcttc cacaggacgt tgccgaacca gcggatgggg
     3301 cggaggatgt agagttccac gccctcgtcc acgtagtact tgttcagcag caggttgtgg
     3361 aggaagggga acttcgcggc aaaggcc
//
LOCUS       DASUDT010000040         2345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1725235, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000040 DASUDT010000000
VERSION     DASUDT010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725235"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VFV26_00885"
     CDS             <1..350
                     /locus_tag="VFV26_00885"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX4844740.1"
                     /translation="LRFNEGLARAARLHAQDLGPRGALEHVGADGSRLSDRLNRLGRW
                     HGLIAENISTGEDEARQVVIQLLVDDGVAGRGHRKNLFNPDLHHAGAGSAPHRDYRVV
                     TVIDYADGFTAVP"
     gene            392..1177
                     /locus_tag="VFV26_00890"
     CDS             392..1177
                     /locus_tag="VFV26_00890"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4844741.1"
                     /translation="MVFLARLGAPVRGFLEFLGDQAHLVLRTLRHGFSLRSGQWAVVG
                     AQTKLQIRFTGLDAALLVGVTALLLGAVTLIQAFSQLSGLGAENYIGTLMVLIILREL
                     GPLLTAVLVIGRSSTAIAAELGAMQLNGEVDALAAHGVNPYQYLLLPRWLGALLSIFA
                     LVVFFDGAALAGGFLVARLKYGISWGFFLESVRQALSNLDFAATLLKVVLFAGAITFH
                     ACHFGLRIRRSQTEIPQAVTRTVVSALVAVFIIDGLVAALFYF"
     gene            1177..1842
                     /locus_tag="VFV26_00895"
     CDS             1177..1842
                     /locus_tag="VFV26_00895"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4844742.1"
                     /translation="MIQIRGLAFDSPEGRLLMEGLDLEVRRGATLLVSGASGSGKSRL
                     LKVMAGTERPRQGEVRIAGHLIWPGDGALSLAGRVRMGFAFAAGGLLSNLSVEDNVAL
                     PLRFLGLPPAEVVRRAGAALERLGLESVAKLRPHAVSGSARKHANLARVLALEPELVL
                     LDEPLEGLDAADRALAQELIQAWAGDPACTLVMASEEAQTLPGLAADHLQLAPAPMPM
                     ECP"
     gene            1839..>2345
                     /locus_tag="VFV26_00900"
     CDS             1839..>2345
                     /locus_tag="VFV26_00900"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX4844743.1"
                     /translation="MNFEKQDARLGLFVLLALALFVGLLVAKNARAVTERTYPLVVRL
                     DQMEGLAPGTDVQLKGFRVGAVERVDMRQEGVDYHFLATLSVREDIRLWRGTRAVVAP
                     KGVGSVMLDLRLPPPGERTAPLVAGDQIPGEEGVSLGGVLERADRLLANLNTSLDAVR
                     DRVQKKGLG"
BASE COUNT          291 a          786 c          869 g          399 t
ORIGIN      
        1 ccctccgctt caacgagggg ctggcccggg cggcccgcct gcacgcgcag gatcttgggc
       61 cccgcggggc gctggagcat gtgggcgcgg acggcagccg gctttcggac cgcctcaacc
      121 gcctgggacg ctggcacggg ctcatcgccg agaacatcag caccggggag gacgaggccc
      181 gccaggtggt gatccagctc ctggtcgatg atggcgtggc gggccgaggc caccggaaga
      241 acctgttcaa tccggacctg caccatgccg gggcgggctc cgccccccat cgggactacc
      301 gcgtggtgac ggtgatcgac tacgcggacg ggttcacggc ggttccatga tcggttttct
      361 gctagcctga ggaccattcc tcgggtgatc gatggtgttt cttgcgcggc tgggcgcgcc
      421 cgtgcgcggc tttctggagt tcctgggcga ccaggcgcac ctggtgctgc ggaccctgcg
      481 gcacgggttc tcgttgcgct ccggccagtg ggcggtggtg ggggcccaga cgaagctcca
      541 gatccgcttc acggggctgg acgccgctct gctcgtgggc gtcacggccc tgctgctggg
      601 ggccgtgacg ctcattcagg ccttcagcca gttgtcgggc ctgggcgcgg agaactacat
      661 cggcacgctg atggtgctca tcatcctccg ggagctgggg ccgctgctca ccgccgtgct
      721 ggtcatcggc cgcagctcca cggccatcgc cgcggaactg ggcgccatgc agctcaacgg
      781 cgaagtggac gccctggccg cccatggcgt gaatccctac caatacctgc tgctgccccg
      841 ctggctggga gcgctcctgt ccatcttcgc gctggtggtg ttcttcgacg gggcggcgct
      901 ggcgggggga ttcctggtgg cccggctgaa gtacggcatc agctggggat tcttcctgga
      961 atccgtgcga caggcgctgt cgaacctcga tttcgctgcg accctgctga aggtcgtcct
     1021 cttcgccggt gccatcacct tccatgcctg ccacttcggc ctgcggatcc ggcgcagcca
     1081 gaccgagatc ccccaggccg tcacccggac ggtggtttcg gccctggtgg cggtgttcat
     1141 catcgacggc ctcgtggccg cactcttcta cttctgatga tccagatccg cggcctcgca
     1201 ttcgattccc ccgaggggcg cctcctgatg gagggcctgg acctggaggt gcggcggggg
     1261 gccaccctcc tggtgtccgg cgccagcggc tccggcaaga gccggctgct gaaggtcatg
     1321 gcgggcacgg agcgcccccg gcagggcgag gtgcggatcg caggccatct catctggccc
     1381 ggcgacgggg ccctgtccct ggcgggccgt gtgaggatgg gcttcgcctt cgccgcgggc
     1441 ggcctgctgt cgaacctgag cgttgaggac aacgtggcct tgcctttgcg gttcctgggg
     1501 ctgcctcctg cggaggtggt ccgccgcgcc ggggcggccc tggaacggct gggcctcgag
     1561 tccgtggcga agctgcgccc ccatgcggtc agcggttccg cgcggaagca tgcgaacctg
     1621 gcccgcgtcc tggccctgga gccggagctg gtgctgctgg acgagccgct ggagggcctg
     1681 gacgcggcgg accgggccct ggcccaggag ttgatccagg cctgggccgg ggatcccgcc
     1741 tgcacccttg tgatggcctc cgaagaggcc cagaccctgc caggccttgc ggcggaccac
     1801 cttcagctgg ccccggcgcc gatgcccatg gagtgcccat gaacttcgaa aagcaggatg
     1861 cccgcctggg gctcttcgtc ctcctggccc tggccctctt cgtgggcctg ctggtggcga
     1921 agaacgcccg tgccgtgacg gagcggacct atccgctggt ggtgcgcctc gatcagatgg
     1981 aggggctggc gcccggcacg gacgtgcagc tgaagggctt ccgggtgggc gccgtggagc
     2041 gcgtggatat gcgccaggag ggcgtggact accacttcct ggccaccctg tccgtgcgcg
     2101 aggacatccg cctttggcgc ggtacccgcg cggtggtggc gcccaagggc gtgggcagcg
     2161 tgatgctgga cctgcggctg ccgccgccgg gggaacgcac ggcgccactg gtcgcggggg
     2221 atcagatccc gggcgaggag ggcgtgtccc tgggcggcgt gctggagcgg gcggaccgcc
     2281 tgctggcgaa cctgaacacc tccctggacg cggtgcgcga ccgcgtgcag aagaaggggc
     2341 tgggc
//
LOCUS       DASUDT010000041         5218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2189251, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000041 DASUDT010000000
VERSION     DASUDT010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5218
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2189251"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFV26_00905"
     CDS             <1..235
                     /locus_tag="VFV26_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844744.1"
                     /translation="NSASAVVEVIGELTREELRQVAFDEFIVWFRQDLRRFLRAHGGT
                     LPEPANLASATLPVDRFGGNPVPRNVPLGRMDF"
     gene            complement(232..567)
                     /locus_tag="VFV26_00910"
     CDS             complement(232..567)
                     /locus_tag="VFV26_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844745.1"
                     /translation="MSGSGPSGPPHARFEDGLRFLAAALALNIDHRHSAAIVSAACDA
                     IQCFLAVFEIAAQRHLADSHGETARLRGQLEALLTPRQSTEDAARNALAAARLARDQA
                     ARLLPRLMD"
     gene            complement(609..1979)
                     /gene="purF"
                     /locus_tag="VFV26_00915"
     CDS             complement(609..1979)
                     /gene="purF"
                     /locus_tag="VFV26_00915"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX4844746.1"
                     /translation="MPFRDECGVFGICHQVEASRQTYLGLYALQHRGQEAAGICSGDA
                     AGLHLHKAQGYVADVFTEAVLDSLPGDAAIGHTRYSTTGGNVASAAHPFLIHGRFGQV
                     ALCHNGNLTNTEELRSGLIADGHTFTSPSDSEVLLALINRAQAGTLEEAVISALRQAQ
                     GAYSLLILTEDSLIAARDPHGFRPLAMGAMNGTTVFSSETCAFDLVGAAYLRDVAPGE
                     MVVVPRDGGEARSHYPLPKVQPKPCVFEHIYFARPDSLVYGQSVMVARREMGRRLALR
                     HPVEADLIVPVPDSGVSAALGYSEQSGIPFDFGIIRNHYVGRTFIEPKQNIRSFGVKV
                     KLNPVRHLLAGKRVVLVDDSIVRGTTSKKIVQMVREAGAKEVHMRIACPPTTHSCFYG
                     IDTPKRQHLIASYMSLAEITAFVEADTLGYLDLKDLEGCMGDDGQGFCYACFTGDYPV
                     VPGAKK"
     gene            2059..2793
                     /locus_tag="VFV26_00920"
     CDS             2059..2793
                     /locus_tag="VFV26_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844747.1"
                     /translation="MRLPILLLSMTLPLCANGLDDLRASLQRLQGGDPVKATLEHSFW
                     RQTTDDKKPVISQGKVAAQLEEGPQGLKVTWARPTLQQAGKELAAQEQEPDRAAPTRT
                     ALRNLDPLETTEALSHAEALLRDLGQAQLQEERSEPWQGRPARLLVLKLQPKIPANQR
                     KYLKELKADAKVWVGPDGLPLAFSSAVAYRGSRMLISFEGGNNQERQFTKVGGRLVVT
                     KATSEDRNSGLGASSLTKKVTTLTIL"
     gene            complement(2797..3384)
                     /locus_tag="VFV26_00925"
     CDS             complement(2797..3384)
                     /locus_tag="VFV26_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844748.1"
                     /translation="MIRLALLLALSLPALAQEGLQYRMQVWMRGEASPVETRFRLVAT
                     AGTTSHNKVKKPRMGGWRLEADRTQGTPYAQALLLGRAERLLYLAGPSPQTRAEPIAL
                     RFGTRSVPVWSLEMPKGLQASTVLVEVAPGLLALCDLSARFERGDLARIELHLEGLDG
                     TASLAPAEAGTVLLTTLRGWAQEALEGAEDSAAVR"
     gene            3420..4067
                     /locus_tag="VFV26_00930"
     CDS             3420..4067
                     /locus_tag="VFV26_00930"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HEX4844749.1"
                     /translation="MGSWAMPLCFDLDGTLGHFSSGFVLLREALGGLWGTAPTAEELG
                     RCAGSTDWEIVDELHRMRFGTGLDEAGYAAYESACVDRFRAAFVPGGREAVAYAGILG
                     ALHRLAERHRVWLVSGNAPGLLAFKAGVLGIDPAIPRLGSLPRHDRTDLLRHALRGCP
                     GPHLYVGDRPHDLAAAQAAGLPFLGVGEAVPGDHPSLPTDAEPERVIQSVAALLR"
     gene            complement(4084..4590)
                     /locus_tag="VFV26_00935"
     CDS             complement(4084..4590)
                     /locus_tag="VFV26_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844750.1"
                     /translation="MSRVWLSLVALLALTGCREDPRRIENENLGFAATFPGPPKLHRH
                     TDPGPFGDVEWFDLAMSPAGRLDETFSVAVGNLPPGNKGGTTPREVLTTFQNFLMYRF
                     GPVLRTELPAEKGPGFRYKVKGPNGGFIEGVVVVRRGRLHHAQAIVRREGDPRTAALL
                     DDFEVRTR"
     gene            complement(4637..>5218)
                     /locus_tag="VFV26_00940"
     CDS             complement(4637..>5218)
                     /locus_tag="VFV26_00940"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844751.1"
                     /translation="GRLGGPSALSRSPLRHDAAPEDRLIRAGGQAVQHLEAAADRAIA
                     HRAGRWALGIGAVLLAGLGLGVVATFFLVGASGLFFLPLLMLGPPGLMLAWQAWRLRR
                     EVPSQGRDRLREAAERGEPEACFQLGMAYRRGTPQLPRDEGSATAWFLRAAEAGHREA
                     MAALAQAYLGGHGVIRNPREAARWTDIWQRTQP"
BASE COUNT          764 a         1863 c         1861 g          730 t
ORIGIN      
        1 caattccgct tcagcggtgg tcgaagtcat cggggaactg acccgggagg agctgcgcca
       61 ggtggccttc gatgagttca tcgtctggtt ccggcaggat ctccgccgct tcctgagggc
      121 ccatggcggc accctccccg agcccgcgaa cctggcgtcg gcgaccctcc ccgtggaccg
      181 tttcggcggc aaccccgtgc cccgcaacgt gcccctgggg cggatggatt tctaatccat
      241 cagcctcggc agcagccggg cggcctggtc ccgggccagg cgggccgccg ccagggcatt
      301 gcgggcggcg tcttcggtgg actgccgggg ggtgagcagg gcctccagct gtccgcggag
      361 ccgggcggtt tcaccgtgag agtccgccag gtgccgctgg gcggcgatct cgaagactgc
      421 caggaagcac tggatggcgt cgcaggcggc gctcacgatg gcggcgctgt ggcgatggtc
      481 gatgttcagg gccagggccg ccgcgaggaa ccgcaggccg tcctcgaagc gcgcatgggg
      541 gggacccgag ggcccggaac cggacatggc tccagcatag gctgctccac cgggagacag
      601 cgcggcccct atttcttcgc gcccggcacc accggatagt cacccgtgaa gcaggcgtag
      661 cagaagccct ggccgtcatc gcccatgcag ccttccagat ccttcagatc caggtagccc
      721 agggtgtcgg cctcgacaaa ggccgtgatc tccgccagcg acatgtagga cgcgatgagg
      781 tgctggcgct tgggcgtgtc gatgccgtag aagcaggaat gcgtggtggg cgggcaggcg
      841 atgcgcatgt gcacctcctt ggccccggcc tcgcgcacca tctgcacgat cttcttgctg
      901 gtggtgccac gcacgatgct gtcgtccacc agcaccacgc gcttgcccgc cagcaggtgg
      961 cgcacggggt tcagcttcac cttgacgccg aagctgcgga tgttctgctt gggttcgatg
     1021 aaggtgcggc ccacgtagtg gttgcggatg atgccgaaat cgaaggggat gccggactgc
     1081 tcggagtagc ccagggccgc gctcacgccg ctgtcgggca cgggcacgat gaggtcggcc
     1141 tccacgggat gccgcagcgc caggcgccgc cccatctcgc ggcgggccac catgacgctc
     1201 tggccgtaga ccagggaatc gggccgcgcg aagtagatgt gctcgaacac gcagggcttc
     1261 ggctggacct tgggcagggg gtagtgggag cgcgcctcgc cgccatcgcg gggcaccacg
     1321 accatctcgc cgggggccac gtcgcgcagg taggcggcgc ccaccaggtc gaaggcgcag
     1381 gtctcggagc tgaacaccgt cgtgccgttc atggcgccca tggccagggg ccggaagccg
     1441 tggggatccc gggccgcgat gagggaatcc tccgtgagga tgagcaggga gtaggcaccc
     1501 tgggcctggc gcagggccga gatgacggcc tcctccagcg tgccggcctg ggcccggttg
     1561 atgagggcca gcagcacttc ggaatcggag gggctggtga aggtgtggcc gtcggcgatc
     1621 aggccggacc gcagctcctc ggtgttggtg aggttgccgt tgtggcagag cgccacctgg
     1681 ccgaagcgcc cgtggatgag gaaggggtgg gccgcggagg ccacgttccc gcccgtggtg
     1741 gagtagcgcg tatggccgat ggcggcgtcg cccggcagcg aatccagcac ggcctcggtg
     1801 aaaacgtccg ccacgtagcc ctgggccttg tgcaggtgca ggcccgccgc gtcgccggag
     1861 cagatgcccg cggcctcctg cccccggtgc tggagggcgt agaggcccag gtaggtctgc
     1921 cgggaggcct cgacctgatg gcagatcccg aacaccccgc attcgtccct gaacggcatg
     1981 gttcctccga ccttccagga taacctccgg gaaccaagga ccgtagcttc ggcatccctg
     2041 gaccatcccg gagccgccat gcgcctgccc atcctcctgc tttccatgac cttgccactc
     2101 tgcgccaacg gtctggatga cctgcgggcc tccctgcaga ggctgcaggg gggcgacccc
     2161 gtgaaggcca cgctggagca cagcttctgg cggcagacca cggacgacaa gaagcccgtc
     2221 atcagccagg ggaaggtggc cgcccagctg gaagagggcc ctcagggcct gaaagtcacc
     2281 tgggcccggc ccaccctgca gcaggcgggg aaggagctgg ccgcccagga gcaggaaccc
     2341 gaccgcgccg cgcccacccg gaccgccctg aggaacctgg atcccctgga gaccaccgag
     2401 gccctgagcc acgccgaggc cctgctgcgg gacctgggac aggcccagct ccaggaggag
     2461 cggtccgaac cctggcaggg ccgtcccgcc cggctgctgg tgctgaaact ccagccgaag
     2521 atccccgcca accagcggaa atacctcaag gagctcaagg ccgatgcgaa ggtctgggtg
     2581 gggccggatg gccttcccct ggccttctcc agcgcggtgg cctaccgggg cagccgcatg
     2641 ctcatcagct tcgaaggcgg caacaaccag gagcggcagt tcacgaaggt cggcggccgc
     2701 ctcgtggtga cgaaggccac cagcgaggac cggaacagcg gcctcggcgc ctccagcctc
     2761 acgaagaagg tcacgaccct caccattctc tgagggctac cgcaccgccg cgctgtcctc
     2821 ggccccttcc agggcttcct gcgcccagcc ccggagggtg gtgaggagca cagtgcccgc
     2881 ctcggccggg gccagggaag cggtgccgtc gaggccttcc aggtgcagct cgatgcgggc
     2941 cagatccccc cgttcgaagc gggcgctgag gtcgcagagg gccagcagcc cgggcgcgac
     3001 ttccaccagg accgtggagg cctgcagccc cttgggcatc tccaggctcc acacgggcac
     3061 gctccgggtg ccgaagcgca gcgcgatggg ttccgcgcga gtctggggcg aggggcccgc
     3121 caggtagagc agccgctcgg cccggcccag cagcagggcc tgggcgtagg gcgtcccctg
     3181 ggtgcggtcc gcctccaggc gccagccgcc catgcggggc ttcttcacct tgttgtggct
     3241 ggtggtgcct gcggtcgcca ccaggcggaa ccgggtctcc accggcgaag cctcgccgcg
     3301 catccacacc tgcatgcggt actgcaggcc ttcctgcgcc agggcgggaa gcgagagagc
     3361 caaaagaagc gccagtcgga tcaaggaacc accatcctca ccttcgagga tgccatctca
     3421 tgggatcctg ggccatgccg ctctgcttcg acctcgacgg gaccctgggc catttcagct
     3481 ccggcttcgt gctgctgcgg gaggccctgg gcggcctctg gggcacggcc cccacggcgg
     3541 aggagctggg ccggtgcgcc ggatccacgg actgggagat cgtggacgag ctgcaccgga
     3601 tgcggttcgg aaccggcctc gacgaggcgg gctatgcggc ctatgaatcc gcctgcgtgg
     3661 accgcttccg ggcggccttc gtccccgggg gccgggaggc cgtggcctac gcgggcatcc
     3721 tgggcgctct gcaccggctg gccgaacgcc accgcgtctg gctggtctcc ggcaacgccc
     3781 cgggcctgct ggccttcaag gccggcgtgc tgggcatcga ccccgccatc ccccggctgg
     3841 gctccctgcc ccgccacgac cgcacggacc tgctgcggca tgccctgcgc ggctgccccg
     3901 ggccccacct ctacgtgggc gaccgccccc atgacctggc cgccgcccag gccgcgggcc
     3961 tgcccttcct cggcgtgggg gaggccgtgc ccggggacca cccgagcctg cccacggatg
     4021 ccgaacccga gcgggtgatc cagtccgtgg ccgccctgct gcgctaggtc ttgctaggca
     4081 cgcttagcgc gtccgcacct cgaaatcgtc cagcagggcc gcggtgcgtg ggtcgccctc
     4141 gcggcggacg atggcctggg cgtggtgcag gcggccccgc cgcacgacca ccaccccctc
     4201 gatgaagccc ccgttcgggc ccttcacctt gtagcggaag ccggggccct tctcggcggg
     4261 cagctccgtc cgcagaacgg gcccgaaccg gtacatgagg aagttctgga aggtggtgag
     4321 gacctcccga ggggtggtgc cccccttgtt ccccggtggc aggttgccca cggccacgct
     4381 gaaggtctcg tccaggcgtc ccgccggact catggccagg tcgaaccact cgacgtcgcc
     4441 gaaggggccc gggtcggtat ggcgatgcag cttcggcggg cccgggaacg tggccgcgaa
     4501 acccaggttc tcgttctcga tgcggcgcgg atcctccctg caccccgtca gggcgagcag
     4561 cgccaccagg ctcagccaga cgcgggacat ggatcctcct gggcgtgtca tcggacgccc
     4621 gggtgggcaa gttgactcat ggctgggtcc gctgccagat gtccgtccac cgcgccgcct
     4681 cccgggggtt ccggatgacc ccgtggcccc ccaggtaggc ctgcgccagg gcggccatgg
     4741 cctcccggtg cccggcctcg gcggccctga ggaaccacgc ggtggcgctc ccctcgtccc
     4801 ggggcagctg cggcgtgccc cgccggtagg ccatgcccag ctggaagcag gcttcgggct
     4861 cgccgcgctc cgcggcctcc cggagccggt cccgtccctg gctcggcacc tcccggcgca
     4921 gccgccaggc ctgccaggcc agcatgaggc ccggcggccc gagcatcagc aggggcagga
     4981 agaagagccc cgaggccccc accaggaaga acgtggccac cacgcccagg cccagccccg
     5041 ccagcaggac cgcgccgatc cccagggccc agcggccggc ccggtgggcg atcgcgcgat
     5101 ccgccgcggc ctccaggtgc tggacggcct ggcccccagc ccggatgagc cggtcctccg
     5161 gggcggcgtc gtgccgcagc ggactgcggc tcagggccga tgggccccca aggcgccc
//
LOCUS       DASUDT010000042         4897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_223274, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000042 DASUDT010000000
VERSION     DASUDT010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4897
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223274"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..1374
                     /locus_tag="VFV26_00945"
     CDS             253..1374
                     /locus_tag="VFV26_00945"
                     /inference="COORDINATES: protein motif:HMM:NF021610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2344 domain-containing protein"
                     /protein_id="HEX4844752.1"
                     /translation="MDTPHPSTCIPAEALARQARLAAVLAAMEEDRENREPASLQSLR
                     RNLQGGAVDAAAIVESLVAENLVEEGAALIRAGRRGADQAWIRDLASLLDPHAARAAA
                     RREAAWMLDTRRASVRVGYAKEGAALDFDEGDLHAIFMQAFRLEGLCLALDLGKRPRP
                     MLRLALPLPAGAGGLSEWIEAVFRSEPPDGPDAVMGRLNLRLPDGLRILRWEGHAAYA
                     SPLGELARASHWRWVCPGELVVEARRRTSVFLEAKEWIWEKGGKVDGQKQVKPLDLRP
                     LVSELRWEGDILFSTTRSAVSDATNPLKIHAAILGLEPGALWGLVRQSLDLRPDPRLA
                     QAERFEPKLKNMYEDAVLLSGGTNITLVDEDDDEPIRLG"
     gene            complement(1366..2484)
                     /gene="ftsW"
                     /locus_tag="VFV26_00950"
     CDS             complement(1366..2484)
                     /gene="ftsW"
                     /locus_tag="VFV26_00950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEX4844753.1"
                     /translation="MAPDVRRPVDRWLVLFALALVAVGMVWIYSASAIKASQNHAAAT
                     AFLTRQLVGGAIGIAFMLALSQVDLATLQDHPRPLQIAYGVLVLLLVAVLFFGPKING
                     AHRWIRLGSVNLQPSELFKPLSVLIAAAWMVRHREAWSSHRDALPKLLGLAGILSIPL
                     ILILREPDFGTTFLIVFVALMVVFLGGAPKWIFALAIPVLGALGTAFVVMSPYRLARV
                     TSFLNPAADPLGKGHQALQSLVAVGNGGFMGVGLGGGKQKLFFLPEAHTDFIYAVIAE
                     EAGLIGTVAILGLFLAILWRGYRIARLVGDAFLKLCAMGFVLLLVTQALMNMSVVLSL
                     APNKGIPLPFISYGPNSLIASLVCLGLLLAISKEADSA"
     gene            complement(2493..3812)
                     /locus_tag="VFV26_00955"
     CDS             complement(2493..3812)
                     /locus_tag="VFV26_00955"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844754.1"
                     /translation="MSLRYFGTDGIRGAALRSPLTLEEVSRWGAAWAQVAREAGVRRL
                     VVGWDPRSSSGPMSEAFILGVGLGLKVLVLGMAPTPAVAWNVARLSAEGEKTWGLMIS
                     ASHNPPEDNGLKGFNELGEKLEEDQERAIEAVFETLPEPTTISAPPDRLELQPYLAHL
                     TGIDLPAGFTVVIDCAHGATAEAALELFRGGAIHWIGVPADGPAINVGVGSTHLDALA
                     AAVLARGAQLGIAFDGDGDRCLLVDHRGQAVDGDQMVWLLAQDRLACGDTPPGVVGTL
                     MTNGGLAQALGEAGVPFVRTAVGDKFLLREMAKRNWDLAAEASGHLIQKRVGPSGDGL
                     AAALSVLRALLHRPAEQRWAWTFRPWPQRLVNVMARDRKAVDACDGLTSAMAAIDARW
                     GDGVRQVVRWSGTEPKLRLMVEAREAAWVDQALRELESAARRDLALA"
     gene            complement(3822..4640)
                     /gene="folP"
                     /locus_tag="VFV26_00960"
     CDS             complement(3822..4640)
                     /gene="folP"
                     /locus_tag="VFV26_00960"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX4844755.1"
                     /translation="MRSAAFDWGPLLQSGPLFIGILNLTPDSFSDGGRFVDPSAALAQ
                     ARSLAQAGARMLDIGAESTRPGAAAVDAATEWGRLEPVLAVLAEVLPGLPLSLDTRHA
                     TVAERGLAAGVKVINDVTGFAHPAMLEVARRSGCGLIAMRSRRAGDGFLMPPYDDPAP
                     KEAEAAFHELRAVRDRLRGADIPDGRVLLDPGFGFGTTFAEDLALWGALPRLPEALAW
                     PVDRFCIGISRKRFLASRAGTPEIPPARRDALTAAAHAEALAWGYRVFRTHAIG"
     gene            complement(4637..>4897)
                     /locus_tag="VFV26_00965"
     CDS             complement(4637..>4897)
                     /locus_tag="VFV26_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844756.1"
                     /translation="LIDVEVQEFVLRNYARAKTAIETHRDQLVAIAEALLVRETLDGN
                     DIEILMKGGTLPPPKAGSTPTAPATVEGAAAETGLNPALKPA"
BASE COUNT          811 a         1612 c         1777 g          697 t
ORIGIN      
        1 gatctacggc cttgaaccaa cccggggaca cctgtcaacc cccaaggctg aatcgggaac
       61 ctgccaccaa aaatcagcag ggaggcaagt ggcttgagct ggaaggaatt ctcccggatt
      121 gcacacccgc ttcccacaaa ggatgtggaa atcgcatccg ggtgacccgg taaggcatgc
      181 cttgaatctc gatttctgca ggttcatggc gccgcgtgtt ttccacgcgc cagatctcac
      241 tatcctgaaa tcgtggacac tccccatcct tctacctgca tccccgccga ggcccttgcc
      301 cgccaggcgc ggctcgccgc ggttctggcc gccatggagg aggaccgcga gaaccgcgaa
      361 ccggcctccc tccaatcgtt gcgccggaac ctgcagggcg gggcagtgga tgccgccgcg
      421 atcgtcgaat ccctggttgc tgaaaacctg gtggaagagg gcgccgccct gatccgggcc
      481 gggcgccgcg gggcggacca ggcgtggatc agggacctgg cttcgctgct ggacccccac
      541 gccgccaggg ccgcggcccg gcgggaggcc gcttggatgc tggacacccg gcgcgcctcc
      601 gtgcgggtgg gctatgcgaa agaaggcgcc gccctggatt tcgatgaggg ggatctgcac
      661 gccatcttca tgcaggcctt ccgccttgag ggactctgcc tggcgctgga tctcggcaag
      721 cggccccggc ccatgctccg cctggccctg cccctgcccg cgggggcggg cggactttcc
      781 gagtggatcg aggcggtgtt ccgcagcgag cctccggatg gccccgatgc ggtgatgggc
      841 cgtttgaacc tgcggcttcc agacggcttg cggatcctgc gctgggaggg ccacgcggcc
      901 tatgcttcgc ccctgggcga actcgcgcgc gcctcacact ggcgctgggt ctgccccggg
      961 gaactggtgg tcgaggcgag gcgccgcacc tcggtctttc tcgaggccaa ggaatggatc
     1021 tgggagaagg gcgggaaagt ggacggccag aaacaggtga agccgctgga tctgcggccc
     1081 ctggtttcag aactgcgctg ggagggggac atcctgttca gcacgacgcg cagcgcggtt
     1141 tcggacgcca ccaatcccct gaaaatccac gcggccattc tggggcttga gcccggcgcg
     1201 ctctggggcc tcgtccggca gtcgctggac ctgcggcccg atccgcgcct ggcgcaggcg
     1261 gagcgcttcg agcccaaact gaagaacatg tacgaggatg cggtgctgct cagcggaggg
     1321 acgaacatca ccctggtgga cgaggatgac gatgagccca tccggctagg ctgagtcggc
     1381 ttccttgctg atggccagca gcaggcccag gcagaccagg ctggcgatga ggctgttggg
     1441 accgtaggag atgaagggaa gggggatgcc cttgttgggc gccagcgaaa gcaccacgct
     1501 catgttcatg agggcctgcg tcaccagcag cagcacgaag cccatggcgc agagcttgag
     1561 gaaggcgtcg cccacaagcc gggcgatgcg gtagccccgc cacaggatcg cgagaaagag
     1621 gcccaggatc gccacagttc cgatcagtcc ggcctcttcg gcgatcacgg cgtagatgaa
     1681 gtccgtgtgg gcttccggaa ggaagaagag cttctgcttt ccgccgccaa gaccgacgcc
     1741 catgaagccg ccgttgccta ccgccacgag gctctggagg gcctggtggc ccttgccgag
     1801 gggatcggcc gcgggattga ggaagctggt aacgcgggcc aggcggtagg gcgacatcac
     1861 cacgaaggcg gttccgaggg cgcccagcac cgggatcgcg agagcgaaga tccacttggg
     1921 ggccccgccg aggaacacga ccatcagcgc cacgaagacg atgaggaagg tggttccgaa
     1981 gtcgggctcc cgcaggatga ggatcagggg gatggacagg atgccggcca gccccagcag
     2041 cttgggcagg gcgtcgcggt ggctggacca ggcctcgcgg tggcgcacca tccacgctgc
     2101 ggcgatgagg acggacaggg gcttgaagag ctccgatggc tgcaggttca cggagccgag
     2161 acggatccag cgatgggccc cgttgatctt ggggccgaag aagagcacgg ctaccaggag
     2221 cagcaccagg actccgtagg cgatctggag ggggcgcgga tgatcctgga gtgtggccag
     2281 atccacctgg gagagcgcca gcatgaaggc gatgccgatg gcgccgccca ccagctgccg
     2341 ggtcaggaag gccgtggcgg ccgcgtggtt ctgggaggcc ttgatggcgg aggcggagta
     2401 gatccacacc atgcccacgg ccaccagggc cagcgcgaac agcaccagcc agcggtcgac
     2461 ggggcggcgg acatccggtg ccatgcccgg tcctaggcca gcgccagatc gcggcgggcg
     2521 gcggattcca gttcgcggag cgcctggtcc acccaggcgg cctcccgggc ttccaccatg
     2581 aggcggagct tgggttcggt accggaccag cgcaccacct ggcgcacacc atccccccag
     2641 cgggcgtcga tggccgccat ggcggaggtg agtccatcgc atgcatcaac cgctttgcga
     2701 tccctggcca tcacgttgac gaggcgctgg ggccaggggc ggaaggtcca ggcccagcgc
     2761 tgctctgcag ggcggtgcag gagggcgcgg aggaccgaga gggccgcggc aaggccgtcg
     2821 ccgctggggc ccacgcgctt ctggatgagg tggcccgaag cctccgccgc cagatcccag
     2881 ttccgcttcg ccatctcacg cagcaggaac ttgtcgccta cggcggtgcg gacgaagggg
     2941 acgcccgcct ctcccagggc ctgggccagc ccgccgttgg tcatgagcgt gcccaccacg
     3001 cccggaggcg tgtcgccaca ggccaggcgg tcctgggcca ggagccacac catctggtcg
     3061 ccgtccacag cctggccgcg gtggtccacc agcaggcagc ggtccccatc gccatcgaag
     3121 gcgatgccca gctgggcccc tcgggccagc accgccgccg ccagggcgtc gaggtgggtg
     3181 gagcccacgc ccacattgat ggcggggccg tcggcgggca cgccgatcca gtggatggct
     3241 cctccgcgga agagctccag ggccgcctcg gcggtggcgc cgtgggcgca gtcgatgacc
     3301 acggtgaagc cggcaggcag gtcgatgccg gtgaggtggg ccaggtaggg ctggagctcc
     3361 aggcggtccg gcggggcgga gatggtggtg ggctcaggaa gggtttcgaa gacggcctcg
     3421 atggcccgtt cctgatcctc ctccagcttc tcgcccagct cgttgaagcc cttgaggccg
     3481 ttgtcctcgg gcgggttgtg gctggcggag atcatgaggc cccaggtctt ctcgccctcg
     3541 gcgctcagcc tggccacgtt ccaggccacg gcgggcgtgg gggccatgcc cagcaccagg
     3601 actttcaggc cgaggcccac gccgaggatg aaggcctcgg acatggggcc ggaactggac
     3661 cggggatccc agcccaccac cagtcgccgg acccccgcct cccgggccac ctgggcccag
     3721 gcggcacccc agcgggaaac ctcttccagg gtgagggggg aacgcagggc ggcgccccgg
     3781 atgccatcgg ttccaaagta gcggagactc atgcctccag attacccgat ggcgtgcgtc
     3841 cggaagaccc ggtaacccca ggcaagggct tccgcgtggg ctgcggcggt gagggcatcg
     3901 cgccgggctg gcggaatctc gggcgtgccc gcccgcgacg cgaggaaccg cttgcgcgag
     3961 atgccgatgc agaaacggtc cacgggccag gccagggcct ccggaagccg cggcagggca
     4021 ccccacaggg cgaggtcctc cgcgaaggtg gtgccgaacc cgaagcccgg atccagcagg
     4081 acgcggccat cgggaatgtc cgctccgcga aggcggtccc gcacggcgcg cagctcgtgg
     4141 aaggccgctt cggcctcctt gggggccggg tcgtcatagg ggggcatgag gaacccatcg
     4201 ccggcccggc ggctccgcat ggcgatgagg ccacagcccg agcgccgagc cacctccagc
     4261 atcgccgggt gggcgaagcc ggtcacatcg ttgatcacct tgacgcctgc cgccagaccg
     4321 cgctcggcaa ccgtggcatg gcgggtgtcc aggctgagcg ggaggcccgg caggacctcc
     4381 gccagaacag ccagcacggg ttccaggcgg ccccattccg tggcggcgtc caccgctgcc
     4441 gcgccggggc gggtgctttc ggcgccgata tccagcatcc gcgcgcccgc ctgcgccagc
     4501 gaccgggcct gggccagggc cgcggaagga tccacgaacc ggccgccatc gctgaaggag
     4561 tctggagtca ggttgaggat gccgatgaaa aggggaccgc tctggaggag cggtccccaa
     4621 tcgaatgccg ctgacctcac gcgggcttga gggccgggtt gaggccggtc tccgccgcgg
     4681 caccctccac ggtggcgggc gcggtgggcg tgctgccggc cttgggcggg ggcagggtgc
     4741 cgcccttcat gaggatctcg atgtcattgc catcgagggt ctcgcgcacc agcagggctt
     4801 cggcgatggc caccagctga tcacggtggg tctcaatggc cgtcttggca cgggcgtagt
     4861 tgcgcaggac gaattcctgc acttccacat cgatgag
//
LOCUS       DASUDT010000043         8193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1217490, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000043 DASUDT010000000
VERSION     DASUDT010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 8193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8193
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217490"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VFV26_00970"
     CDS             complement(<1..243)
                     /locus_tag="VFV26_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844757.1"
                     /translation="MRRILCLLALALPPLSAQSALVSVIRQPRATAIEFTTPVADFEM
                     KSHGDPVHVHLGIGLGARRWDDGDNAIRFVADANLVA"
     gene            383..1969
                     /locus_tag="VFV26_00975"
     CDS             383..1969
                     /locus_tag="VFV26_00975"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4844758.1"
                     /translation="MKISRKLRWGFGLCAGAVALVGGLGYFMNTRISGFSRQVIQVNS
                     KQVDHAQRLRANINMLRRYEKDLFLNLGDAAAVAKYQKSWDEAREQAKKRVAELTRLE
                     TEPKNLATLAEINVQLEAYAKGFASVAGQIQAGAIKTPAEANRAIGEFKSATHQAEAT
                     ITAYAGRQDQDIAQALKDMDDSNRRDQVLMSVILLFTFAGMAVFAARLIGSIRKPLQG
                     IAHLVRDMGQGEGDLTHRLTYAGKDELGEICEGFNQFVTKLRGIIAQVAQTSHQVASA
                     TQELSATAEQINQTTAELSQNADRQREAMIQSSSALEQMSASIVQVRSAAGEAEKVAD
                     GSLAMTSQGSTAAQASNHAMDAIKESSGKVGRITGVIADIARQTNLLSLNAAIEAAKA
                     GAQGKGFAVVAEEIRKLAERSATAAKEISGLIGESSERVDMGVDSVGSVGRSLSSIEA
                     ATRENMDRIRSISLAMEEQSKASQEMVSAVGTTTQISEQTAGASTQLSSTIHEVSRTI
                     EELARIANELRVQTSQFKLA"
     gene            complement(1956..2510)
                     /locus_tag="VFV26_00980"
     CDS             complement(1956..2510)
                     /locus_tag="VFV26_00980"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4844759.1"
                     /translation="MAEALKAGRALELRPLRLQDARALFVLVDANRDRLRRWLPWPDA
                     NRSVQDSRDYILRMRALAKTGLGQSYGLWWKDRLVGVAGFNWIDRVNRNAAIGYWLAK
                     EAEGQGLMTAAVAALLRHGFRTLRLNRIEIRAGVRNRRSRAIPVRLGFHHEGTLRQAE
                     RLADRWVDHAVYGLLAEEWRPRRA"
     gene            complement(2522..3370)
                     /gene="kdsA"
                     /locus_tag="VFV26_00985"
     CDS             complement(2522..3370)
                     /gene="kdsA"
                     /locus_tag="VFV26_00985"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX4844760.1"
                     /translation="MQAEVHMDFTRPFTGQSFFLIGGPCVIESREHAHLMASSLRDIA
                     EARGIPFIYKSSFDKANRTSRDSHRGPGMEEGLDILAEVRSRYGVPVLTDVHESDQCA
                     PAAQAVDVLQIPAFLCRQTDLLLAAAATGRTVNLKKGQFLAPWDLKHGVDKLKSVPGH
                     GPVWVTERGSSFGYGNLVVDFQSFPHLRKTGCPVIFDATHSVQKPGALGNATGGAREM
                     IPTLARAAATAVDGFFFEVHECPEKAHSDGPNAMRLEEFGALLDQLLVLWRAGRAAAQ
                     LDPAGR"
     gene            3468..3974
                     /locus_tag="VFV26_00990"
     CDS             3468..3974
                     /locus_tag="VFV26_00990"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX4844761.1"
                     /translation="MAKTLMEDDLNRRLVALLQQDGRMSHAELAERLGVSRPTIIDRV
                     KRLEADGVLAGYAARVAPAAVNKPNVAFVAVRYKDNNEAIEQRFIKALEDEPDILEAH
                     TVAGEDALMLKVVADTPAGIAERLRRIRALGPMVTTRTTIVLETHWEKAGPSPFPSSE
                     MPGKKAKK"
     gene            4003..4875
                     /locus_tag="VFV26_00995"
     CDS             4003..4875
                     /locus_tag="VFV26_00995"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4844762.1"
                     /translation="MLAWMAYLTVAVVWGSTYFAIALGLESFTPYGMVAARFSVASLL
                     ALGLGRLRREAWPSRREAGHLMVVGALLLGCSNALISWAELHVSSGFAAIFAALVPLW
                     LAVFSMAKDPLGPKGWTGLALGLAGVCVLVWPAAGSARVHLGGLAALVAAPIIWSWGT
                     LHGKHFVHGGGLLTNVGIQMATAAVIGLALAPLTGGFLRGPLTPKALGAVAYLALFGS
                     VLAFSAYIYLAKAWPPAKMGTYAYLNPLVAVLLGTLLLREAFGLREIVGMAVILLAVG
                     LVQVRSRTVPAEEG"
     gene            complement(4883..6082)
                     /locus_tag="VFV26_01000"
     CDS             complement(4883..6082)
                     /locus_tag="VFV26_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844763.1"
                     /translation="MKSASILLLLSLALACAREDRASLHRRPISPTPASGWARLPLDA
                     GAQRQVQGAWIGDAAGRSIPFQEAREGLWESRTLPIERLLTGRDAEGRPTAEFSLKLP
                     EGWRVGERETLRLDLDLDGRAPWVAQVKAERLQEGGAFIAYDPASPLHLYDLSPSGTR
                     HSLDLPWDGHRYRLTLLASQGEAPRIRSLSARAETRPEALETELALEGTLAPEPGQPR
                     TWRLSLPDTERVVGLDLLLAPPAAPLRPEVRLGEGPEADRAWFCGDLVWNLPALKTKA
                     TRIALAPAQARTLTVTLPEGAALQSARILVRRQTLIFPAEAGLAYALHLGGEAKPAPG
                     NLGALPSIRVLASAAPLSLGASEPDDQGLPRQEGADQRARPWMPWIAGLALLALGYAA
                     WRLFRQP"
     gene            complement(6079..7818)
                     /locus_tag="VFV26_01005"
     CDS             complement(6079..7818)
                     /locus_tag="VFV26_01005"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEX4844764.1"
                     /translation="MADLPQDPTGSQDLAPRVARLEAQVAWLLQQAQAGAPTPPTPVP
                     ARPQPRPAPAPAPPRKELSPVVWIAGIGAAIFLFGAIFFFRWAIQQGWVGAELRFILG
                     LLAGGAISGFAARLLLGDSRRLGVALLLAGLGTLQFTFRAGAMAYHFYPAALGLAAAA
                     LVTLLAGGLAARGRSGGALTVALVSGLAAPLVFSQGGHHEVALAIYLAVLMAAALAVP
                     YLARAGGAWHGARWTALVGVWLLLLPACSEVLKADAGLLALILVLHLALAGLWAWLPG
                     REETPGTPTVLWLVASILGTTYGWLLWKRLDLAPETFALPVLAVAALNLALVKPLRER
                     MASRRADWGLLALAAGHLALAVPVALAWRWLGPLWGAFALGLAWASLKAEDSEFSEEA
                     TALRWLAAALALLTTLRWAFHGLDGLFFHGRAMTPFLNPAFAEGALASAAWWMLTRRG
                     GPLGLISFLALEVVANVTLAFEAARLVQRLQTPAFPGWGPSRAASIAMTLVWALSGAW
                     QWMRGLGQRDTARRALMIAGYAWMGIASLKLIVSDLDRADTPLRALAFLGVGGIGMVA
                     AILANRQRSGEAS"
     gene            complement(7876..>8193)
                     /locus_tag="VFV26_01010"
     CDS             complement(7876..>8193)
                     /locus_tag="VFV26_01010"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4844765.1"
                     /translation="HVLSVMAQRMAFGLRKVDQVGRVGGEEFLAYGPETDLDGLRALA
                     ERLRQQVALEPIPGLPEADRVTLSIGLAAWEGPGDTLERMMARADKNLYQAKAEGRNR
                     VIG"
BASE COUNT         1277 a         2729 c         3054 g         1133 t
ORIGIN      
        1 ggccaccagg ttggcatccg ccacgaagcg gatggcgttg tcaccgtcgt cccagcgccg
       61 cgcgcccagg ccgatgccca ggtgcacatg gacggggtcg ccgtgggact tcatctcgaa
      121 atcggcgacg ggggtggtga attcgatggc cgtggcccgg ggctggcgga tcaccgacac
      181 cagcgcggac tgggccgaca ggggcgggag ggctagggcg aggaggcaga ggattcggcg
      241 catggggggg ttaccgcttg gagccagagt ggtttagcta tgggccggac ctggaatgca
      301 ctgaaaaata aacttcccat gaaaaaagat cgatggagga cgtaacgatt ttcattcatg
      361 acctttttgt ccggagtaat acatgaagat cagccgaaaa ctgaggtggg gcttcggcct
      421 gtgtgctggg gccgtggccc tcgtgggggg gctgggctat ttcatgaaca ccaggatcag
      481 cggctttagc cgccaggtga tccaggtcaa ttcgaagcag gtggaccatg cccagcgcct
      541 gcgggccaac atcaacatgc tgcgccgcta tgaaaaggac ctcttcctga accttggcga
      601 tgccgccgcc gtcgccaagt accagaaaag ctgggatgag gcccgggaac aggccaagaa
      661 gcgcgtggcc gagctgacca ggctggagac cgaaccgaag aatctggcga ccctggccga
      721 gatcaatgtc cagctggaag cctacgccaa gggcttcgcc agcgtggcgg ggcagatcca
      781 agccggcgcc atcaagacgc cggcggaggc caaccgagcc atcggcgagt tcaagtccgc
      841 cacccaccag gcagaggcga ccatcactgc ctacgccggt aggcaagacc aggatatcgc
      901 ccaggccctg aaggacatgg atgactccaa ccggcgggac caggtcctca tgtcggtgat
      961 cctgctgttc accttcgccg gcatggccgt cttcgcggcc cggctgatcg gatccatccg
     1021 caagcccctc cagggcattg cccacctggt gagggacatg ggccagggcg agggggacct
     1081 gacccaccgg ctgacctacg ccggcaagga cgagcttggg gagatctgcg agggtttcaa
     1141 tcagtttgtc accaagctgc gaggcatcat cgcccaggtg gcccagacct cccaccaggt
     1201 ggcctcggct acccaggagc tcagcgccac ggcggagcag atcaaccaga ccacggcgga
     1261 actgagccag aatgccgatc gtcagcggga ggccatgatc cagtcctcct cggccctgga
     1321 gcagatgtca gcttccatcg tgcaggttcg ctccgcagcg ggtgaagccg agaaggtcgc
     1381 ggatggctcc ctggccatga cgtcccaggg cagcaccgct gcccaggcca gcaaccacgc
     1441 catggatgcc atcaaggaat cctccggcaa ggtgggccgt atcacggggg tgatcgccga
     1501 catcgcccgg cagaccaacc tgctgtccct gaatgccgcc atcgaggccg ccaaggccgg
     1561 ggcccagggc aagggcttcg ccgtggtggc cgaggaaatc cgcaagctgg cggagcgcag
     1621 cgccaccgct gccaaggaga tctcggggct cattggtgaa agcagcgagc gggtggatat
     1681 gggcgtggac tccgtgggca gcgtgggacg cagcctcagc tccatcgagg cggccacccg
     1741 ggagaacatg gaccgcatcc gcagcatctc cctggccatg gaggagcagt ccaaggccag
     1801 tcaggagatg gtctccgcgg tgggcaccac cacccagatc tccgagcaga ccgcgggcgc
     1861 ctcgactcag ctctcctcca ccatccacga ggtctcccgc accattgaag agctggcccg
     1921 gatcgccaac gagttgcggg tccagacctc gcagttcaag ctcgcctagg tcgccactcc
     1981 tccgccagca acccgtacac cgcgtgatcc acccagcggt cggcgaggcg ttccgcctgc
     2041 cggagggtgc cctcgtggtg gaagcccagg cgcacgggga tggcgcggct gcggcggttg
     2101 cggaccccgg cgcggatctc gatgcggttg agccggaggg tgcggaagcc gtggcggagc
     2161 agggcggcca cggcggcggt catcaggccc tgcccctcgg cctccttcgc cagccagtac
     2221 ccgatggcgg cattgcggtt gacgcggtcg atccagttga atcccgcgac gcccaccagg
     2281 cggtccttcc accagagccc gtaggactgg cccagcccgg ttttcgccag ggcgcgcatc
     2341 cgcaggatgt agtcgcggga gtcctgcacg ctgcggttgg cgtcgggcca gggcagccag
     2401 cggcgaagac ggtcccggtt cgcgtccacc aggacgaaaa gggcccgggc atcctgcagg
     2461 cgcaggggcc gcagctccag ggctctcccg gctttgaggg cctcggccat gccttcccct
     2521 gctaccggcc cgcgggatcc agctgcgccg cggcgcgacc ggcccgccac agcaccagca
     2581 gttgatccag cagggcgccg aactcttcca ggcgcatggc gttggggccg tcgctgtggg
     2641 ccttctcggg gcactcgtgc acctcgaaga agaagccgtc cacggccgtg gccgcggccc
     2701 gggccagggt ggggatcatc tcccgggcgc cgccggtggc gttccccagg gcgccgggct
     2761 tctggacgct gtgggtggcg tcgaagatga cggggcagcc ggtcttgcgc aggtggggga
     2821 agctctggaa atccaccacc aggttgccgt agccgaagct ggagccccgc tccgtgaccc
     2881 acacggggcc gtggccgggg acggacttca gcttgtccac gccgtgcttc aggtcccagg
     2941 gcgcgaggaa ctggcccttc ttcaggttga cggtgcggcc cgtggcggcg gcggcgagga
     3001 gcaggtcggt ctggcggcag aggaaggcgg ggatctggag cacgtccacg gcctgggcgg
     3061 ccggggcgca ctgatcgctc tcgtgcacat cggtcagcac cggcacgccg tagcggctgc
     3121 ggacctcggc caggatgtcg aggccctcct ccatgcccgg tccccggtgg ctgtcgcggc
     3181 tggtgcgatt ggccttgtcg aagctggatt tgtagatgaa ggggatgccg cgggcctcgg
     3241 cgatgtcccg caggctcgac gccatcaggt gggcgtgctc gcggctttcg atgacgcagg
     3301 gccccccgat gaggaagaag ctctggcccg tgaaggggcg ggtgaagtcc atgtgcacct
     3361 ctgcctgcat tttacctccg atcgatcatt tacgggttgt catgtgtatt gatgaagctg
     3421 cttgcacagt gttcaatggt ttcaccctta cctttttgga gttccgcatg gcgaagacgt
     3481 tgatggaaga cgatctgaac cgccgtctgg tggccctgct ccagcaggat gggcgcatga
     3541 gccacgccga actggccgaa cggctgggcg tgagccgtcc taccatcatc gaccgcgtga
     3601 agcgcctgga ggccgacggc gtcctggcgg gctacgcggc ccgggtggcg cccgcggccg
     3661 tgaacaagcc caacgtggcc ttcgtggcgg tgcgctacaa ggacaacaac gaggccatcg
     3721 agcagcggtt catcaaggcg ctggaggacg agcccgacat cctggaggcc cacaccgtgg
     3781 cgggggagga cgccctcatg ctgaaggtgg tggccgacac ccccgcgggc atcgccgagc
     3841 gcctgcgccg catccgggcc ctgggcccca tggtcaccac ccgcaccacc atcgtgctgg
     3901 agacccactg ggagaaggcg ggacccagtc ccttcccctc ttccgagatg ccggggaaga
     3961 aggccaagaa gtgaagcccc ggcccttcgg cgggggaatc tgatgctggc gtggatggcc
     4021 tacctcacgg tggcggtggt ctggggctcc acctacttcg ccatcgccct gggcctggag
     4081 tccttcacgc cctacggcat ggtggcggcg cggttttccg tggcctccct cctggccctg
     4141 ggcctgggcc ggctgcggcg ggaggcctgg ccatcgagga gggaggccgg ccacctgatg
     4201 gtcgtggggg ccctgctgct gggttgctca aacgccctga tctcctgggc cgaactgcac
     4261 gtctcctccg ggttcgccgc catcttcgcg gccctggtcc ccctctggct ggcggtcttc
     4321 tccatggcga aggatcccct gggccccaag ggctggaccg gcctcgcgct gggcctggcg
     4381 ggggtctgtg tgctggtgtg gcccgccgcc gggagcgcgc gggtgcacct cggcggcctg
     4441 gcggccctgg tggccgcgcc catcatctgg tcctggggca ccctccacgg caagcacttc
     4501 gtccacggcg gcgggctgct caccaacgtg ggcatccaga tggcgacggc ggccgtgatc
     4561 ggcctggccc tggcgccgct cacgggcggc ttcctgcggg gccccctcac cccgaaggcc
     4621 ctgggcgccg tggcctacct ggccctcttc ggctcggtgc tggccttctc cgcctacatc
     4681 tacctggcca aggcctggcc tccggccaag atgggcacct acgcctacct gaatcccctg
     4741 gtggcggtgc tgctgggcac cctcctcctg cgcgaggcct tcggcctgcg cgagatcgtc
     4801 ggtatggccg tcatcctgct ggctgtggga ctggtccagg tgcggtcgag gactgtcccg
     4861 gcagaggaag gctgaaaagg ttctagggct gcctgaacag ccgccaggcc gcgtagccga
     4921 gcgccagcag ggccagcccg gcgatccagg gcatccaggg ccgggcgcgc tgatcggcgc
     4981 cctcctggcg ggggaggccc tggtcatcgg gttcggaggc tccgaggctg aggggcgccg
     5041 ccgaggccag gacgcggatg gaggggaggg cgccgaggtt cccgggggcg ggtttggctt
     5101 cgccgcccag gtgcagggcg taggccaggc cggcttcggc ggggaagatg agggtctgcc
     5161 ggcgcacgag aatccgtgcg gactggaggg cggcgccttc gggcagggtg acggtgaggg
     5221 tccttgcctg cgcgggggcc agcgcgatgc gggtggcctt cgtcttcagg gccgggaggt
     5281 tccagaccag gtcgccgcag aaccaggcgc ggtcggcctc cgggccttcg ccgaggcgga
     5341 cctcggggcg cagcggggcc gcaggtggcg ccagcagcag atcgaggccc accacgcgct
     5401 cggtgtccgg cagggacagg cgccaggtgc gcggctggcc cggctcgggc gcgagggttc
     5461 cctccagggc cagctcggtt tccagggcct cgggccgggt ttcggcgcgg gcggagaggc
     5521 ttcggatccg gggcgcctcg ccctgggagg ccagcagggt cagccggtag cggtggccgt
     5581 cccaggggag atccaggctg tggcgggtcc cggacgggga cagatcgtag aggtgcaggg
     5641 gcgaggccgg gtcgtaggcg atgaaggcgc cgccctcctg caggcgctcg gccttcacct
     5701 gggccaccca gggggcgcgg ccgtcgagat ccaggtccag ccgcagggtt tcccgctcgc
     5761 ccacccgcca gccctcgggg agcttcagcg agaactccgc cgtgggccgg ccttcggcgt
     5821 cccggcccgt gaggaggcgc tcgatgggca gagtgcggga ttcccagagg ccctcgcggg
     5881 cctcctggaa ggggatgctc cggccggcgg catcaccgat ccaggcgccc tgcacctggc
     5941 gctgggcccc ggcgtccagg ggcaggcggg cccagccgct ggccggggtg ggcgagatgg
     6001 ggcggcgatg gagggaggca cggtcctccc gggcgcaggc cagggccagg ctgagcagga
     6061 gcaggatgct ggcggacttc atgaggcctc cccggatcgc tgccggttgg ccaggatggc
     6121 cgccaccatg ccgatgccgc ccacgcccag gaaggccagg gcccgcagcg gcgtatcggc
     6181 gcggtccaga tccgacacga tgagcttgag gctggcgatc cccatccagg cgtagcccgc
     6241 gatcatcagg gcgcggcggg cggtgtcgcg ctgcccgagg ccgcgcatcc actgccaggc
     6301 gccggacagg gcccacacca gggtcatggc gatggaggcg gcgcgggagg ggccccaacc
     6361 agggaaggcg ggcgtctgga ggcgttgcac caggcgggcc gcctcgaagg ccagggtcac
     6421 gttggccacc acctccaggg cgaggaagga gatcaggccc agggggccgc cccgccgcgt
     6481 gagcatccac caggcggcgg aagccagggc cccctccgcg aaggcggggt tgaggaaggg
     6541 cgtcatggcc cggccgtgga agaagagccc atcgaggccg tggaaggccc agcgcagggt
     6601 ggtgagcagg gccagggccg ccgcgagcca gcgcagggcc gtggcctctt ccgagaactc
     6661 gctgtcctcg gccttcaggg aggcccaggc caggcccagg gcgaaggcgc cccagagggg
     6721 gcccaaccag cgccaggcca gggcgacggg cacggccagg gccaggtgcc cggcggccag
     6781 ggccagcagg ccccagtcgg cgcggcggga ggccatgcgt tcgcgcaggg gcttcaccag
     6841 ggccaggttc agggccgcca cggcgaggac cggcagggcg aaggtctccg gggcgaggtc
     6901 caggcgcttc cacagcagcc aaccgtaggt ggtgcccagg atcgaggcca cgagccagag
     6961 caccgtgggc gtgccgggcg tctcctcccg ccctggcagc caggcccaga ggcccgccag
     7021 ggccaggtgg aggacgagga tcagggcgag caggcccgca tcggccttca ggacttccga
     7081 acaggcgggc agcagcagca gccagacgcc cacgagggcg gtccagcggg ctccgtgcca
     7141 ggcgccaccc gcgcgggcca ggtagggcac ggccagggcc gcggccatga gcacggcgag
     7201 gtagatggcc agcgccactt cgtgatgacc gccctggctg aagaccaggg gggccgccag
     7261 gcccgagacc agggccacgg tgagggcgcc gccgctgcgg ccccgggccg ccaggccccc
     7321 ggcgagcagg gtcaccaacg cggcggcggc caggcccagg gccgcgggat agaagtggta
     7381 ggccatggcc ccggcgcgga aggtgaactg gagggtgccc aggcccgcca gcagcagggc
     7441 cacgcccagg cggcggctgt cgcccagcag cagccgggcg gcgaaaccgg agatggcgcc
     7501 gcctgccagc aggccgagga tgaagcgcag ctccgcgccc acccagccct gctggatggc
     7561 ccagcggaag aagaagatgg cgccgaagag gaagatggcc gcgccgatgc ccgcgatcca
     7621 caccacgggc gacagctcct tccggggggg ggccggagcg ggggcgggtc ggggctgagg
     7681 ccgggcgggc acgggggtgg ggggcgtcgg tgcgcccgcc tgggcctgct ggaggagcca
     7741 ggccacctgg gcctccaggc gggccacgcg cggggcgaga tcctgcgaac cggtgggatc
     7801 ctgcggaagg tcggccacac tgtctccata cggaagcgta tggaatcatc ccgccagggt
     7861 gggaaccctg tcaagtcagc cgatgacccg gttccgtccc tcggccttgg cctggtacag
     7921 gttcttgtcc gcccgggcca tcatgcgttc cagggtgtcc ccggggcctt cccaggcggc
     7981 gaggccgatg ctgagggtca cgcggtcagc ctcggggagc ccggggatgg gttccagggc
     8041 cacctgctgg cgaagccgct ccgccagggc ccggaggccg tcgaggtcgg tttcggggcc
     8101 gtaggccagg aactcctccc cgccgacgcg gcccacctgg tcaaccttgc gcagcccgaa
     8161 ggccatgcgc tgggccatga cgctgaggac gtg
//
LOCUS       DASUDT010000044         2108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_112933, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000044 DASUDT010000000
VERSION     DASUDT010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112933"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1543)
                     /locus_tag="VFV26_01015"
     CDS             complement(<1..1543)
                     /locus_tag="VFV26_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012762427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4844766.1"
                     /translation="MVPTPPRDAYYALTKALISIGRKNGFLLVDQLNDFLPDTTSSPN
                     DLDVVMGLVARLGVGIGATEEEALAAREAIEPEFVLVEGGGKADKDLEVEIDSPDSDK
                     FNDPVRMYLKEMGTVPLLKREDEVEIAKRIEVGVRSVMRALSRSRLAASLLIDIGKML
                     KENPGKIREVVGLSDEVDDDEDAESTSATQHVHHQFEKLLVYDQALQELLDVKVQVDA
                     GTKTLPKKRKLGREILQARGRLSRQIRKLGLNSLAVTRLIDRITHQHNQVMAGERKCR
                     ELRDRLKNPAFAKLKEKYKEELAHIEKTLADFFIKYETTSEVFHKDFNGLKAAESISR
                     GAKAELIEANLRLVVSIAKRYTNRGLQFLDLIQEGNIGLMKAVDKFEYSRGFKFSTYA
                     TWWIRQAITRAIADQARTIRIPVHMIETINKLIRTQRELVQKLGREPSSEEIAHAMDM
                     PVGKVRKVMKIAQEPISLETPIGEEEDSHLGDFIEDKKAVSPLEAAIRYDLQRQINSA
                     LETLTP"
     gene            complement(1700..>2108)
                     /locus_tag="VFV26_01020"
     CDS             complement(1700..>2108)
                     /locus_tag="VFV26_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844767.1"
                     /translation="LDDLIRRLLLLSAAGHWRRVQEIPPAWWESLAGAPLLQALLDAE
                     GDLTLLPGGAVAALRHLEAQASRQDEAGRDAEALFARLEGGYVDREIQANNRLLQDPS
                     TMVDAALTARVMARQNELLARQKKLSRERRGLR"
BASE COUNT          302 a          648 c          739 g          419 t
ORIGIN      
        1 gaggagtcag ggtctccagc gcgctgttga tctgccgttg taaatcgtag cggatggcgg
       61 cttccagcgg agacacggct ttcttgtctt cgatgaagtc gcccaagtgg ctgtcttctt
      121 cctcgccgat gggggtttcc agggagatgg gctcctgggc gatcttcatc accttgcgga
      181 ccttgcccac gggcatgtcc atggcgtggg cgatctcctc gctggagggt tcgcggccca
      241 gcttctgcac cagctcacgc tgggtgcgga tgagcttgtt gatggtctcg atcatgtgca
      301 cggggatgcg gatggtgcgg gcctggtccg cgatggcgcg ggtgatggcc tgccggatcc
      361 accaggtggc gtaggtggag aacttgaagc cgcggctgta ttcgaacttg tccacggcct
      421 tcatgaggcc gatgttgccc tcctggatga ggtccaggaa ctggaggcca cggttggtgt
      481 agcgcttggc gatgctgacc acgaggcgga ggttggcctc gatgagctcg gccttggcgc
      541 cccggctgat gctttccgcg gccttgagcc cgttgaagtc cttgtggaag acctcgctgg
      601 tggtctcgta cttgatgaag aagtcggcca gggtcttctc gatgtgggcc agctcctcct
      661 tgtacttttc cttcagcttg gcgaaagcgg ggttcttgag gcggtcccgc agctcgcggc
      721 acttgcgctc accggccatg acctggttgt gctggtgggt gatgcggtcg atgagccggg
      781 tgacggccag gctgttgagg cccagcttgc ggatctggcg ggacaggcgc ccccgcgcct
      841 ggaggatctc gcggcccagc ttgcgcttct tgggcagggt cttggtgccg gcgtccacct
      901 ggaccttgac gtccagcagc tcctggagcg cctggtcgta gaccagcagc ttctcgaact
      961 ggtggtgcac gtgctgggtg gcggaggtgc tttcggcatc ctcgtcgtcg tccacctcat
     1021 cggaaagacc caccacttcg cggatcttgc cggggttctc cttcagcatc ttgccgatgt
     1081 cgatgagcag gctggcggcc agacggctgc gggagagggc ccgcatgacg ctgcgcacgc
     1141 ccacttcgat gcgcttggcg atctcgactt cgtcctcgcg cttgaggagg ggcaccgtgc
     1201 ccatctcctt gagatacatg cgaaccggat cgttgaactt gtcgctgtcg gggctgtcga
     1261 tctccacctc gagatccttg tcggccttgc cgccgccctc caccaggacg aactcgggct
     1321 cgatggcctc ccgggccgcg agggcctctt cctcggtggc gccgatgccc acgcccagac
     1381 gcgcgaccag acccatgacc acgtcgagat cgttggggct cgaggtggta tcggggagga
     1441 agtcattgag ctggtcgacc agcaggaatc cgtttttcct tccgatggag atcagggctt
     1501 tggtcagggc gtagtaggca tcacgtggcg gcgtcggaac cattcggacc tcaaagagcg
     1561 ctgcggcatc gggccagcgg gcgggggaac ccggcggccg agggaaaaac agaacacggc
     1621 caatgtaccg ggccgagtcc ggaacttttc agtatagggg atctgcgaat ccaggcaagg
     1681 gtcgaggttc cttcggggct cagcgcagcc cccgccgctc gcgggacagc ttcttctggc
     1741 gggccaggag ctcgttctgc ctggccatga cccgtgccgt gagcgcggca tccaccatgg
     1801 tgctgggatc ctggagcagc cggttgttgg cctggatctc ccggtccacg tagcctcctt
     1861 cgagccgggc gaacagggcc tccgcgtccc ggccggcctc gtcctggcgg ctggcctggg
     1921 cctccaggtg gcgcagggcg gcgacggcgc ccccgggcag cagcgtgagg tcgccctccg
     1981 cgtccagcag ggcctgaagc aggggggcgc ccgcgaggct ctcccaccag gcgggcggaa
     2041 tctcctgcac gcgccgccag tggcccgcag cgctcagcag gagcaggcgg cggatcaggt
     2101 cgtcgagg
//
LOCUS       DASUDT010000045         8174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1725653, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000045 DASUDT010000000
VERSION     DASUDT010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 8174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8174
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725653"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..2139
                     /locus_tag="VFV26_01025"
     CDS             115..2139
                     /locus_tag="VFV26_01025"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEX4844768.1"
                     /translation="MASPLRASLGLCLGLAAFTLAAQSKPGMDPVNLDTTVKPCEDFY
                     QFANGGWLKSHSLPADKARFGAFEEVSERNRAILQQILTETSARTNWAKGSVEQKVGD
                     FYTSGMNEAAIEKRGLAPLKPILATIEGLKDAKQLPTLLAKLHAQGLPGGFGFFVRQD
                     AKASTQYLAYLGQGGTGLPDRDYYLKDDARSRDIRAKYEAHIAKMLELAGDAPGLARA
                     RARVVVDLETRMAQAQWSRVEMRNPQKTYNKRTLDQVAAEAPGFDWKGYFKARGVKVA
                     DLNLSQPSYFQAFGKLASEVPAPQWRTYLRWHALSATASLLPRAFGEEAFAFQGKVLN
                     GTPEREPRAKRIEAMADGTLGEALGQLYVKAAFPPESKKKVLEMVENLRVALRERITN
                     LDWMGAETKQQAITKLNAFGVKIGYPDKWKTYAFDVKRDDYFGNVRRAAAFRIQENLA
                     KLGKPIDRTEWGMTPSTVNAYYSPTMNEIVFPAGILQPPFFDPKADDAVNYGSLGFVI
                     GHEMTHGFDDSGSQFDAEGNLKNWWTDADKKAYQSRTDLVVKQYDAYEPLKGERVNGK
                     LTLGENIADIGGLKIAFAAYQNSLKGKPVPAPIDGFTGPQRFFLGAAAVWRNHIREAA
                     LSLRLKTDPHSPGRERVNGPLSNLPEFYEAFGCADGQPMKRDAQVRPAIW"
     gene            2190..4202
                     /locus_tag="VFV26_01030"
     CDS             2190..4202
                     /locus_tag="VFV26_01030"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEX4844769.1"
                     /translation="MNTRSAFTVLALAASLVARVPAPRPILGVDPVHIEASASPCRDF
                     YGYANGVFDRKPIPGEYASYGVNQEIDERNFAVLKGILETAARRGGPKGSLAQRVGDF
                     YAAGMDEARIEKAGVRPLAPLLTAIQALKTPADLMAGLGRLHATGIPAGFGFGVQVDD
                     KDSSAMIASFTQGGLGLPERDYYLRPGTDADAIRQAYERHVGRIFALAGDSADSAKAQ
                     ARIVMALETKLAEASRTLVALRDPEANYHKVARKDLRALADLDWNAYFTAVALPAGES
                     HVLVGQPEFYKALAGLMASEPMAAWQVYLRWHVLRHAAPHLGAAFVDENFAFYGKTLS
                     GATELRPRWKRILAAADRALGEDLGQLFVKTAFSPAAKARALEMVHFHKEAMRARILA
                     ADWMGEATKAQAIRKLDTMRSKVGYPDQWRDYRSLDVSRRSHALNVQAAAAFDFKRRM
                     AKLGRPVDRNEWHMTPQTNNAYYDPSMNEMCFPAGILQPPFFDEKADDAANYGALAST
                     IGHELTHGFDDQGRQYDWQGNLKAWWTDEDAQRFEARAHHIVKQYDAFEVLPGLRING
                     KLTLGENIADIGGLRVSFEAFKLATQGKELKPIGGFTPEQRFFIAFAQGWRTNQRPEA
                     LRLQVASDVHAPVRWRVLGPVADFPEFRKAFGCEPPPAGQSPTAIW"
     gene            4235..5884
                     /locus_tag="VFV26_01035"
     CDS             4235..5884
                     /locus_tag="VFV26_01035"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF015536.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070004 - cysteine-type exopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HEX4844770.1"
                     /translation="MRLRPLVLLATLLAAGAALEACTNLLVTKGASKDGSTMITYAAD
                     SHTLYGELYFKRGGRHLPGEMRDIREWDSGYTFDTGKLLGRIPEAPVTYTRVGNMNEH
                     QLAIAETTFGGRKDLAAPTGIIDYGSLIYIALERAKTAREAIDVMTKLVDEFGYASSG
                     ESFSIADPNEVWILEMIGKGQGQKGAVWVAYKLPDGTISAHANQARIRQFPLNDPKTA
                     LYSKDVISFAREKGWFKGEDRSFSFADTYAPLSFGALRGCEARVWSIFNRAAKSQKIP
                     MDFVKAEKGARPMPLFVKPDQKLDVRDAMELMRDHYQGTEFDMTKDVGAGPYKLPYRW
                     RPMGFQVDGQSYIHERAISTQQTGFSFVSQSRSWLPDPVGGVLWFGVDDTYTTVYVPI
                     SCGIKEPPKAFAIGTGNFNEFSWDSAFWTFNFVTNYTYTRWSDMIVDVQKVQREFEGR
                     YAADQAEVDRTALELYRQNPGAARDYLTQVAAKETEQLMGRWKKLGEFLIWKYLDGNV
                     RNERGEVTHPKAPEDWLRCIVKDHGDVIKVKKVEGLALDEE"
     gene            6064..7842
                     /locus_tag="VFV26_01040"
     CDS             6064..7842
                     /locus_tag="VFV26_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX4844771.1"
                     /translation="MRHPDPHSYYDAAQPKARRLRLKLGVDFAAKRIDGEVVLEFGSA
                     VSGTLDLDTKGLEIRTVQVPGHGPIPWELGEPDAILGQRLRLQVPAGTQEVAVTYRTG
                     ADAMALQWLDAEQTEGKVAPYLFSQCQQIHARTMVPCQDTPIARIAYQAEVTVPQGLT
                     AVMSAGPAGDEATADGRHTFRFTMPQPIPPYLLALAVGRLEARDLSPRARVWAEPELV
                     EAAAWEFAGVEDMILKAESLFGPYPWDRYDMLVLPPSFPYGGMENPRMTFLTPTLLAG
                     DRSLVDVVAHELAHSWTGNLVTNASMEHFWLNEGFTVWAERRILRILHGDDAAALGWA
                     MGQKALEDSLARFKGEPHLTILRMHLVGIDPDDAFSSIPYEKGARLVAALEREVGEER
                     FLRFIRDYMEAFRFTSITTEQFCAFAETKLPGALEAVDAAAYLDQPGIPASAPEFRSV
                     QLDTLTLLAESWAEGGRPSAHQMATWKPAELQVYLQKLPRQLTQADCAWLDEHFQLMG
                     RGNHEILVEWLTLAAAADYEPAFPRIREVLMRVGRMKYLRPLYGALGGAPRTRALARE
                     IFAAASPGYHGLSRRVVQSVLEAYPA"
     gene            7992..>8174
                     /locus_tag="VFV26_01045"
     CDS             7992..>8174
                     /locus_tag="VFV26_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844772.1"
                     /translation="MSHGSEPQEIKGLPSNARRPLAPGESYIPLVPQDGMPETTPRAI
                     TMGLIFCAIFSMAAAYL"
BASE COUNT         1432 a         3049 c         2513 g         1180 t
ORIGIN      
        1 cgtggaactg tgcgacgcgc agggggtggt gcatgcggaa gtacagaaag tcatacacat
       61 atccctgcgt cacccttcct gataggcttt aaccctcatc ttacgaggtt attcatggca
      121 tcccccctgc gcgcctccct cggcctctgc ctgggcctcg cggccttcac cctggccgcc
      181 cagtccaagc ccggcatgga tcccgtcaac ctggacacca ccgtgaagcc ctgcgaggac
      241 ttctaccagt tcgccaacgg cggctggctc aagtcccaca gccttcccgc ggacaaggcc
      301 cgcttcgggg ccttcgaaga agtcagcgaa cggaaccgcg ccatcctcca gcagatcctg
      361 accgagacca gcgccaggac gaactgggcc aagggcagtg tcgagcagaa ggtgggcgac
      421 ttctacactt ccggcatgaa cgaggccgcc atcgagaagc gcgggctggc gccgctcaag
      481 cccatcctcg ccaccatcga aggcctgaag gacgcgaagc agctccccac cctgctggcg
      541 aaactccatg cccagggtct gcccggcggt ttcggcttct tcgtacgcca ggacgccaag
      601 gcctccacgc agtacctcgc ctatctgggc cagggcggca cggggctacc ggatcgcgac
      661 tactacctga aggacgatgc ccgcagccgg gacatccgcg ccaagtacga agcccacatc
      721 gcgaagatgc tcgaactcgc cggtgatgcc cccggcctgg cccgggcccg cgcccgggtg
      781 gtggtggacc tggaaacccg catggcccag gcccagtgga gccgcgtgga gatgcgcaac
      841 ccccagaaga cctacaacaa gcgcaccctc gaccaggtgg ccgccgaggc cccgggtttc
      901 gactggaagg gctacttcaa ggcccgcggc gtgaaggtgg ccgacctgaa cctgagccag
      961 ccctcctact tccaggcttt cggcaagctg gcttcggaag tgcccgcccc ccagtggcgc
     1021 acctacctgc gctggcacgc cctcagcgcc accgccagcc tcctgcccag ggccttcggc
     1081 gaggaggcct tcgccttcca aggcaaggtg ctgaacggca ccccggagcg cgagccccgg
     1141 gccaagcgca tcgaggccat ggccgacggc accctgggcg aggccctggg ccagctctac
     1201 gtgaaggcgg ccttcccgcc cgagtccaag aagaaggtgc tcgagatggt ggagaacctc
     1261 cgcgtggcgc tgcgggagcg catcaccaac ctggactgga tgggcgccga aaccaagcag
     1321 caggccatca ccaagctcaa cgccttcggc gtgaagatcg gctatccgga caagtggaag
     1381 acctacgcct tcgacgtgaa gcgggatgac tacttcggca acgtgcgccg cgccgcggcc
     1441 ttccgcatcc aggagaacct ggccaagctc ggcaagccca tcgaccgcac ggaatggggc
     1501 atgacgccct ccaccgtgaa cgcctactac agccccacca tgaacgagat cgtgttcccg
     1561 gcgggcatcc tgcagccgcc cttcttcgat ccgaaggccg atgatgccgt caactacggc
     1621 tccctgggct tcgtcatcgg ccacgagatg acccacggct tcgacgacag cggcagccag
     1681 ttcgacgccg agggcaacct caagaactgg tggaccgatg cggacaagaa ggcctaccag
     1741 tcccgcaccg atctcgtggt caagcagtac gacgcctacg agcccctcaa gggcgagcgt
     1801 gtgaacggca agctcaccct cggcgagaac atcgccgaca tcggcggcct caagatcgcc
     1861 tttgccgcct accagaacag cctgaagggc aagcccgtcc cggcgcccat cgacgggttc
     1921 accggccccc agcgcttctt cctgggcgcc gccgccgtct ggcgcaacca catccgcgaa
     1981 gcggccctgt ccctgcgcct gaagaccgat ccccacagtc ccggccggga gcgcgtcaat
     2041 ggtcccctgt ccaacctgcc ggagttctac gaggccttcg gctgcgccga cggccagccc
     2101 atgaagcgcg acgcgcaggt gcggcccgcc atctggtgat ccacgctccg gaaggcggcg
     2161 ccttccgggg attgaaaaag ggacatggtt tgaacactcg atccgccttc accgttctcg
     2221 cgctggctgc ctccctggtg gcgcgagtcc ccgccccccg gcccatcctc ggtgtggacc
     2281 ccgtccacat cgaggcgtcg gcctcgccct gccgggattt ctacggctac gccaacggcg
     2341 tcttcgaccg gaagcccatc cccggcgaat acgcctccta tggcgtgaac caggagatcg
     2401 acgaacgcaa tttcgcggtc ctgaagggga tcctcgaaac ggcggcgcgc aggggcggcc
     2461 ccaagggcag cctggctcag cgcgtgggtg atttctacgc cgccggcatg gacgaggccc
     2521 gcatcgagaa ggccggggtc cggcccctgg cgcccctcct gactgccatc caggccctga
     2581 agacgcccgc cgacctcatg gccgggctgg gacggctcca cgccacgggc atccccgccg
     2641 gattcggatt cggcgtccag gtggacgaca aggacagcag cgccatgatc gccagcttca
     2701 cccagggcgg tctcggcctg ccggagcgcg actactacct gcgccccggc acggacgccg
     2761 acgcgatccg ccaggcctac gagcgccatg tggggcggat cttcgccctc gccggcgact
     2821 ccgctgattc cgccaaggcc caggcccgga tcgtgatggc cctggagacg aagctggcgg
     2881 aagcctcccg caccctcgtg gccctgcggg atcccgaggc caactaccac aaggtggccc
     2941 ggaaggatct ccgggccctg gcggacctgg actggaatgc ctatttcacc gccgtggccc
     3001 tgcccgccgg ggaatcccat gtgctggtgg gccagcccga gttctacaag gccctggccg
     3061 gcctcatggc ttccgagccc atggcggcct ggcaggtcta cctccgctgg cacgtcctgc
     3121 gccacgccgc cccccacctg ggcgccgcct tcgtggacga gaacttcgcc ttctacggga
     3181 agaccctctc cggcgccacg gagctgcgcc cccgctggaa gcgcatcctc gccgccgcgg
     3241 accgcgccct gggcgaagac ctcggccagc tcttcgtgaa gaccgccttc agccccgccg
     3301 ccaaggcccg ggccctggag atggtccact tccacaagga ggccatgcgc gcccgcatcc
     3361 tcgccgcgga ctggatgggc gaagccacca aggcccaggc catccggaag ctcgacacca
     3421 tgcgcagcaa agtgggctat cccgaccagt ggcgcgacta ccgcagcctg gacgtgtccc
     3481 gccgttccca cgcgctcaac gtgcaggccg cggcggcctt cgacttcaag cgccgcatgg
     3541 ccaagctggg ccggcccgtg gaccgcaacg agtggcacat gacgccccag accaacaacg
     3601 cctactacga ccccagcatg aacgagatgt gcttccccgc gggcatcctc cagcccccct
     3661 tcttcgacga gaaggccgac gacgccgcca actacggggc cctggcctcc accatcggcc
     3721 acgagctgac ccacggcttc gacgaccagg gccgccagta cgactggcag ggcaacctga
     3781 aggcctggtg gaccgacgag gacgcccagc gcttcgaagc ccgggcccac cacatcgtga
     3841 agcagtacga cgccttcgag gtgctacccg gcctgcgcat caacggcaag ctgaccctgg
     3901 gcgagaacat cgccgacatc ggcgggctcc gcgtgtcctt tgaagccttc aagctggcca
     3961 cccagggcaa agagctgaag cccatcggcg ggttcacgcc ggaacagcgg ttcttcatcg
     4021 ccttcgccca gggctggcgc accaaccagc gccccgaagc cctgcgcctg caggtagcct
     4081 ccgatgtcca cgcccccgtg cggtggcgtg tgctgggccc cgtggccgat ttccccgagt
     4141 tccggaaagc cttcggctgc gagccccctc ccgccggaca gtcccccacg gccatctggt
     4201 agcatccctg aaccccgtcc cgccaaggag tcccatgcgc ctgcgccccc tcgtcctcct
     4261 cgccaccctc ctcgccgccg gcgcggccct ggaggcctgc accaacctgc tcgtgaccaa
     4321 gggcgcgagc aaggacggct cgaccatgat cacctacgcc gccgacagcc acacgctcta
     4381 cggtgagctc tacttcaagc gcgggggccg ccacctgccg ggcgagatgc gcgacatccg
     4441 cgagtgggac agcggctata ccttcgacac gggcaagctg ctgggccgca tccccgaggc
     4501 cccggtcacc tacacccgcg tgggcaacat gaacgagcac cagctcgcca tcgccgaaac
     4561 caccttcggc gggcgcaagg acctggccgc ccccaccggc atcatcgact acggcagcct
     4621 catctacatc gccctggagc gcgccaagac cgcccgcgag gccattgatg tgatgacgaa
     4681 gctggtggac gagttcggct acgccagcag cggcgagagc ttctccatcg ccgatcccaa
     4741 cgaggtctgg atcctcgaga tgatcggcaa gggccagggc cagaagggcg ccgtctgggt
     4801 ggcctacaag ctgccggacg gcaccatcag cgcccacgcc aaccaggccc gcatccgcca
     4861 gttccccctg aatgatccca agaccgccct ctacagcaag gacgtcatct ccttcgcccg
     4921 cgagaagggc tggttcaagg gcgaggacag gtccttcagc ttcgccgaca cctacgcgcc
     4981 gctgagcttc ggcgccctgc gcggctgcga ggcccgggtg tggagcatct tcaaccgcgc
     5041 cgccaagagc cagaagatcc ccatggactt cgtgaaggcc gagaagggcg ccaggcccat
     5101 gcccctcttc gtcaagcccg accagaagct ggacgtgcgc gacgccatgg agctcatgcg
     5161 cgaccactac cagggcaccg agttcgacat gaccaaggat gtgggcgcgg gcccctacaa
     5221 gctgccctac cgctggcggc ccatgggctt ccaggtggac ggccagtcct acatccacga
     5281 gcgcgccatc agcacccagc agaccggctt ctccttcgtg agccagagcc ggtcctggct
     5341 gcccgatccc gtgggcggcg tgctctggtt cggcgtggat gacacctaca ccacggtcta
     5401 cgtgcccatc tcctgcggca tcaaggaacc gcccaaggcc ttcgccatcg gcaccgggaa
     5461 cttcaacgag ttcagctggg acagcgcctt ctggaccttc aacttcgtga cgaactacac
     5521 ctacacccgc tggagcgaca tgatcgtgga cgtccagaag gtgcagcggg agttcgaggg
     5581 ccgctacgcc gccgaccagg ccgaggtgga ccgcaccgcc ctggagctct accggcagaa
     5641 ccccggcgcc gcccgcgact acctcaccca ggtcgcggcg aaggagaccg agcagctcat
     5701 gggccgctgg aagaagctgg gcgagttcct catctggaag tacctggacg gcaacgtgcg
     5761 caacgagcgg ggcgaagtca cccaccccaa ggcccccgag gactggctgc gctgcatcgt
     5821 caaggaccac ggcgatgtga tcaaggtgaa gaaggtcgag gggttggcgc tggacgagga
     5881 atagtccagg gctgaaaacc tgcggttttc aggaagaagg gccccgcgct gcggggccct
     5941 tgctttggtg gtcgtctttt ccatactcag gccctgcgca gcggggcctg agcccagccg
     6001 ccccacttgt gacgcctgcg aatcctgacc ccatggcatc atggccggtt ccccgaggtc
     6061 ttcatgcgtc acccggatcc gcattcctac tacgatgccg cccagcccaa ggcccgccgc
     6121 ctgcggctga agctgggggt ggatttcgcc gccaagcgga tcgatggcga ggtggtgctg
     6181 gaattcggca gcgccgtctc cggcaccctg gacctggaca ccaagggcct ggaaatccgc
     6241 accgtgcagg tgccgggcca cggccccatc ccctgggagc ttggggaacc ggacgccatc
     6301 ctgggccagc ggctgcgcct gcaggtgccc gcaggcacgc aggaagtggc tgtcacctac
     6361 cggacgggag cggacgccat ggccctccag tggctggacg cggagcagac cgagggcaag
     6421 gtggcgccct acctcttcag ccagtgccag cagatccatg cccgcaccat ggtcccctgc
     6481 caggacacgc ccatcgcccg catcgcctac caggcggaag tgaccgtgcc ccagggcctc
     6541 accgccgtca tgtccgcggg tcccgccggg gacgaggcca cggccgacgg ccgccacacc
     6601 ttccgcttca ccatgcccca gcccattccc ccctacctgc tggccctggc cgtgggacgc
     6661 ctggaggccc gcgacctcag cccccgcgcc cgcgtgtggg ccgagccgga actggtggaa
     6721 gcggccgcct gggaattcgc cggtgtggag gacatgatcc tcaaggccga gagcctcttc
     6781 gggccctacc cctgggaccg ctacgacatg ctcgtgctgc cgccctcctt cccctacggc
     6841 ggcatggaga acccgcgcat gaccttcctc acgcccaccc tgctggcggg ggaccgcagc
     6901 ctggtggacg tggtggccca cgagctggcc cacagctgga ccggcaacct cgtcaccaac
     6961 gccagcatgg agcacttctg gctgaacgag ggcttcaccg tgtgggccga gcggcgcatc
     7021 ctccgcatcc tccacggcga tgacgccgcg gcgctcggct gggccatggg ccagaaggcc
     7081 ctggaggaca gcctggcgcg cttcaagggc gaaccccacc tcaccatcct gcgcatgcac
     7141 ctggtgggca ttgatcccga cgatgccttc tccagcatcc cctacgagaa gggcgcgcgg
     7201 ctggtggcgg ccctcgaacg cgaagtgggc gaggagcggt tcctccggtt catccgggac
     7261 tacatggagg ccttccgctt cacctccatc accaccgagc agttctgcgc cttcgcggaa
     7321 accaagctgc cgggcgccct ggaggccgtg gacgccgccg cctacctgga tcagccgggc
     7381 atccccgcca gcgccccgga attccgcagc gtgcagctgg acaccctcac cctgctggcg
     7441 gaaagctggg cggagggcgg acggcccagc gcccaccaga tggccacctg gaagcccgcc
     7501 gaactgcagg tctacctcca gaagctgccc cgccagctca cccaggccga ctgcgcctgg
     7561 ctggacgagc acttccagct catgggccgc ggcaaccacg agatcctggt ggagtggctc
     7621 accctggccg ccgccgcgga ttacgagccc gccttccccc gcatccgcga agtgctgatg
     7681 cgggtgggcc gcatgaagta cctgcggccc ctctacggcg ccctgggcgg cgccccccgc
     7741 acccgggccc tggcccgcga gatcttcgcc gccgccagcc ccggctacca cggcctctcg
     7801 cgccgcgtgg tccagtccgt cctcgaagcc tatcctgcct gaagatccac cacggaggca
     7861 cggagggcac tgaggaatca cggagagacc gcggagagag actccactac cacctgctcc
     7921 gtgcattctc tgtgtttttt ctctgtgatc tccgtgcctc cgtggtgaat ccctttccca
     7981 aagaggtacc catgtcccac ggatccgaac cccaggagat caaggggctg ccgagcaacg
     8041 cgcggcggcc gctggcgccc ggtgagagct acattcccct ggttccccag gacggcatgc
     8101 ccgaaaccac gccccgcgcc atcaccatgg gcctcatctt ctgcgccatc ttcagcatgg
     8161 ccgccgccta cctg
//
LOCUS       DASUDT010000046         2112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_974670, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000046 DASUDT010000000
VERSION     DASUDT010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974670"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VFV26_01050"
     CDS             <1..457
                     /locus_tag="VFV26_01050"
                     /inference="COORDINATES: protein motif:HMM:NF014856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HEX4844773.1"
                     /translation="KLLEYNVRFGDPETQVLMQLLDEDLPALLLEVAEGRLVSRELKL
                     RPHTAITVVLAAEDYPEGAKKDVPIAIGTPAATLIHAGTRKQDGQWLTNGGRVMNLAT
                     SAPDLGAARAAIEAALTQVNWPGMQVRRDIGLKALRHAEAGKTVEDAWG"
     gene            complement(482..829)
                     /locus_tag="VFV26_01055"
     CDS             complement(482..829)
                     /locus_tag="VFV26_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844774.1"
                     /translation="MLDLLLIPAGLFLALALRAVRRGEHRLHGHLMTAAFTLAGLRVL
                     LHPRSLAQVHLTAWAVTLASAGATILLGRKALAWREGRSVQAFLPRIHRAAGTLTLVL
                     AALTLVMWFLLER"
     gene            complement(854..1741)
                     /locus_tag="VFV26_01060"
     CDS             complement(854..1741)
                     /locus_tag="VFV26_01060"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX4844775.1"
                     /translation="MDIQRIGIVGCGLMGSGIAQCAAEAGCEVWVKEAGEAYLAKGLA
                     RINGTWDRAVAKGKITEDQKAAFSGRLHGTLTFTDLASCDLVVEAVPERMDLKLETFA
                     ELDRIVAPGALLCTNTSSLTVAHLSPVLSPGRLPLLAGLHFFNPVPAMPLVEIVRTLA
                     TGEDTLAALKAFVQRLGKTAVLAPDAPGFVVNRLLVPYLLDALRCAEQKLATVEDIDT
                     AMRLGCGHPMGPLHLSDFIGLDTMQSVAEVLFEAFGEPRFKAPSVLRQLVAAGRLGRK
                     SGAGFYRWEGEKRMEALPL"
     gene            1864..>2112
                     /locus_tag="VFV26_01065"
     CDS             1864..>2112
                     /locus_tag="VFV26_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844776.1"
                     /translation="MTSLLKDLLDHQAWADAMFFHAWGKSAFLEDSELRTRTGHLVDV
                     QEAFLEILKGGTVTLKEQPLPEFEALKTRCRASHEALRA"
BASE COUNT          347 a          676 c          775 g          314 t
ORIGIN      
        1 gaagctgctg gaatacaacg tgcgtttcgg cgaccccgaa acccaggtgc tcatgcagct
       61 gctggatgag gatctgccgg ccctgctgct ggaggtggcc gaaggacgcc tcgtttcgcg
      121 ggagctgaag ctgaggcccc acacggccat caccgtggtg ctggccgcgg aggattatcc
      181 cgaaggtgcg aagaaggacg tgcccatcgc catcgggacc ccggccgcca ccctcatcca
      241 tgcgggcacc cggaagcagg atggacagtg gctgaccaac ggcggccgcg tcatgaacct
      301 ggccacctcc gcgccggacc tcggcgccgc ccgagccgcc atcgaggctg ccctgactca
      361 ggtgaattgg cccggcatgc aggtgcgccg cgacatcggc ctcaaggcgc tgcggcatgc
      421 agaggccggg aagaccgtcg aggatgcctg gggctgatgg gttccagggg cgaccctgga
      481 actagcgttc cagcaggaac cacatcacca gggtgagggc ggcgaggacg agggtgagcg
      541 tgcctgccgc gcggtggatt cttgggagga aggcctggac gctgcgcccc tcgcgccagg
      601 ccagggcctt ccgacctagg aggatggtcg ctccggctga ggccagggtg acggcccagg
      661 ccgtgagatg gacctgcgcc aggctcctcg gatggagcag aacgcgcagg ccggccaggg
      721 tgaaggccgc cgtcatgagg tggccgtgga ggcggtgctc tccccgccgg accgcccgga
      781 gggccagggc caggaagagc ccggcgggaa tcagcagcag gtccagcatg gccgccagac
      841 tacaacaggt ggatcagagc gggagggcct ccatgcgctt ctccccctcc cagcggtaga
      901 agcccgcgcc ggatttccgg cccaggcggc ccgcggccac cagctggcgc agcacggaag
      961 gggccttgaa gcggggttcc ccgaaggctt cgaacagcac ctcggccacg ctctgcatgg
     1021 tgtcgaggcc gatgaaatcg ctgaggtgca ggggacccat gggatggccg cagcccagcc
     1081 tcatggcggt gtcgatgtcc tccaccgtgg ccagcttctg ctcggcgcag cgcagggcgt
     1141 ccagcaggta gggcaccagg agccggttca ccacgaaacc cggagcgtcc ggcgccagca
     1201 cggcggtctt gccgagccgc tggacgaagg ccttcagggc ggcgagggtg tcctcgccgg
     1261 tggcgagggt gcggacgatc tcgacgaggg gcatggcggg cacggggttg aagaagtgca
     1321 ggcccgccag caggggcagg cggcccggtg acaggaccgg gctgaggtgg gcgacggtga
     1381 ggctggaggt gttggtgcag agcagggcgc ccggggccac gatcctgtcc agctcggcga
     1441 aggtttcgag cttgaggtcc atgcgctccg gcacggcctc caccacgagg tcgcagctgg
     1501 ccaggtcggt gaaggtgagg gtgccgtgga gccggccgct gaaggcggct ttctggtctt
     1561 cggtgatctt ccccttggcc acggcgcggt cccaggtgcc gttgatccgg gccagaccct
     1621 tggcgagata ggcttcgccc gcctccttca cccagacctc gcagcccgct tccgcggcgc
     1681 actgggcgat gcccgacccc atgaggccgc agccgacgat gccgatgcgc tggatgtcca
     1741 tatcgagccc cctggtggaa tggtgatggt ttggcctcca tcttccgccg gttgcggcca
     1801 tggaggggcg atgacctggg gtaggtttct ttcgctatga tcgatcagcc cacggaggcc
     1861 cccatgacca gcctgctgaa ggatctgctc gaccaccagg cctgggcgga cgccatgttc
     1921 ttccacgcct ggggcaagtc ggcgttcctg gaggattccg agttgcggac gaggaccggc
     1981 catctggtgg atgtgcagga ggcctttctg gagatcctga agggtgggac cgtgaccctg
     2041 aaagagcagc ccctgcccga gtttgaagcc ctgaagaccc gctgccgggc cagccacgaa
     2101 gcgctccggg cc
//
LOCUS       DASUDT010000047         2704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1394444, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000047 DASUDT010000000
VERSION     DASUDT010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394444"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..771
                     /gene="frr"
                     /locus_tag="VFV26_01070"
     CDS             196..771
                     /gene="frr"
                     /locus_tag="VFV26_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX4844777.1"
                     /translation="MTAQTPDAILQETKRRMHASVEALKKEMGTIRTGRANASLLDNV
                     HVEYYGSVVPVNQMATVSVPEAGMLVVQPFDKSAIKAIETAILKSELGINPGNDGNVI
                     RLPIPMLTEERRKELVKVLHRLGEEIKTGVRNIRRDANEDVKKLEKAKENHISEDVAK
                     KTLDDIQKLTDAHTKEIDEAMKHKEAEILKV"
     gene            922..1695
                     /locus_tag="VFV26_01075"
     CDS             922..1695
                     /locus_tag="VFV26_01075"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEX4844778.1"
                     /translation="MPSLPTLALLMLAALLAGFIDAVVGGGGLITVPALMLGLPAGTP
                     LPTLLGTNKVVAVTGATMAAGKFLRSGTLAWREMVVPVLASALGATGGVWLTYRVHGD
                     FLRPVMLGLLVAMLAFTLLKPDLGSLHAPKYGLSHQRGLAALIALALGFYDGFFGPGT
                     GSVLIFLAVAVLGFDFLRASALAKAVNWASNITAMGLFVWQGSWIPTVALSMAVANGV
                     GGYLGAHVALSKGSRWVRGVFIGVVGALILRLGWQVFRG"
     gene            1705..1992
                     /locus_tag="VFV26_01080"
     CDS             1705..1992
                     /locus_tag="VFV26_01080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844779.1"
                     /translation="MPSRHRPFAWDVLFRSARFFYLLWGGMLLSTLAFYGRLKLPAFF
                     WQWPELCRALMGPWGRALALGFGLVMCLAALIEVWELVDRLLVRFMGESER"
     gene            2336..>2704
                     /locus_tag="VFV26_01085"
     CDS             2336..>2704
                     /locus_tag="VFV26_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844780.1"
                     /translation="MLGVAALPAAAQSLALPAADPVGIARSGAQVAYGYSLEAASANP
                     ALLASLKEKTGFYLAAGLSMASTQQSLESNQRSLYSTDRNRAIGAFGAVFRTSPALTL
                     GLKLDEPFLRNGQLPGTASSR"
BASE COUNT          411 a          871 c          950 g          472 t
ORIGIN      
        1 tgagggcgaa gccgtccgcg ctggtgagcg ccatgtcggt ggcggcgggc gcggcggtca
       61 gggccaggga cgccaagggt gccagcaggc ggaggatgcg catggggacc tcgcggaagt
      121 gccccactct agcacgcatg gaagccacag ctttgtgggg tataaaagag ggattgcgat
      181 ctttacgagg tgcctatgac cgcccagacc cccgatgcca tcctccagga aaccaaacgc
      241 cgcatgcatg cgtccgtgga ggcgctgaag aaggagatgg ggaccatccg cacgggccgg
      301 gccaatgcga gcctgctgga caacgtgcac gtggagtact acggctccgt ggtgcccgtg
      361 aaccagatgg ccaccgtgtc ggtgcccgag gccggcatgc tggtggtcca gcccttcgac
      421 aagagcgcca tcaaggccat cgagaccgcc atcctcaagt ccgagctcgg catcaatccc
      481 ggcaacgacg gcaacgtgat ccgcctgccc atccccatgc tcaccgaaga gcgccgcaag
      541 gagctggtga aggtgctcca ccgcctgggc gaggagatca agaccggcgt gcgcaacatc
      601 cgccgcgacg ccaatgagga cgtgaagaag ctggagaagg ccaaggagaa ccacatctcc
      661 gaggacgtgg cgaagaagac gctggatgac atccagaagc tcacggacgc ccacaccaag
      721 gagatcgacg aggccatgaa gcacaaggaa gcggagattt tgaaggtctg acgacgttca
      781 gtctggagtc tggagtccgg aggttggcgc cggtccatgg ttcgccgctc cgtgcccgga
      841 cggcccaaac tcaggaatag cgtggcccgc agggccgcaa caagaagcag tgcctccaga
      901 ctccagactc cggacccatt catgccttct ctccccaccc tcgccctcct catgctcgcc
      961 gccctgctgg cgggcttcat cgacgcggtg gtgggcggtg gcgggctgat cacggtgccg
     1021 gcgctcatgc tcgggctgcc ggcgggcacg ccgctgccca cgctgctggg cacgaacaag
     1081 gtggtggccg tcacgggcgc gaccatggcg gcgggcaagt tcctgcgctc ggggacgctg
     1141 gcctggcggg agatggtggt gccggtgctg gcctcggccc tgggcgctac tgggggcgtg
     1201 tggctcacct accgggtgca cggggacttc ctgcggcccg tgatgctggg tcttttggtg
     1261 gccatgctgg ccttcaccct cttgaagccg gacctgggca gcctgcatgc gccgaagtac
     1321 ggcctttccc atcagcgggg cctggcggcc ctcatcgcct tggccctggg cttctacgac
     1381 gggtttttcg gcccgggaac ggggtccgtg ctgatcttcc tggcggtggc cgtgctgggc
     1441 ttcgacttcc tgcgggcctc ggccctggcc aaggccgtga actgggcttc gaatatcacg
     1501 gccatggggc tcttcgtgtg gcagggcagc tggatcccca cggtggccct cagcatggcc
     1561 gtggccaacg gcgtgggcgg ctacctgggc gcccacgtgg ccctcagcaa gggcagccgc
     1621 tgggtgcggg gggtcttcat cggggtggtg ggcgccctga ttctgcgctt gggctggcag
     1681 gtcttccgcg gttagattta gccgatgccc tcccgccacc gtcccttcgc ctgggacgtc
     1741 ctcttccggt ccgcgcgctt cttctacctg ttgtgggggg ggatgctgct ctccaccctg
     1801 gccttctacg gccggttgaa gctgccggcg ttcttctggc agtggccgga gctgtgccgg
     1861 gccctcatgg gcccctgggg ccgggccctg gccctgggct tcgggctggt catgtgcctg
     1921 gcggccctga tcgaggtgtg ggagctggtg gaccggctgc tggtgcgctt tatgggtgag
     1981 tccgaacgct gagtcacagc accccagagt gcaaagatgc caccacggag gcgcggagca
     2041 tgggcacacg ggaggcaccg ggtccggatc ccctctggga catccgggcc cggtgcctcc
     2101 cgtggcttcc ggcctggcca tgacggagga acacggaggc ctccgtgcca tctccgtgga
     2161 ttcggtggct ccgtggtggg cccttgccgt ggaatgagct tggtgattcg ggcccttttg
     2221 gcgatcctgg agccttgggc ttgaaccctt tcggggttcg ggccattcaa gaagcgtgtc
     2281 tcggaggcgt ggcgatatgg cgcaggcagt tcgtggagtg atcggggcag gtttgatgct
     2341 gggcgtggcc gccctgccgg cggcagccca gagcctggcc cttccggccg cggatcccgt
     2401 gggcatcgcc cgcagcggcg cgcaggtggc ctatggctac agcctggaag cggcctcggc
     2461 caaccccgcg ctgctggcct ccctcaagga gaagacgggg ttctacctgg cggccggcct
     2521 ttcgatggcc tccacccagc agagccttga atccaaccag cgcagcctct acagcacgga
     2581 tcgcaaccgg gccatcggcg ccttcggtgc ggtcttccgg acctccccgg ccctgacctt
     2641 gggcctgaag ctggatgaac ccttcctgcg aaatgggcag ctaccgggca cagcgtccag
     2701 ccgt
//
LOCUS       DASUDT010000048         3462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1615341, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000048 DASUDT010000000
VERSION     DASUDT010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3462
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615341"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..1408
                     /locus_tag="VFV26_01090"
     CDS             95..1408
                     /locus_tag="VFV26_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844781.1"
                     /translation="MSLRSLLTRLLPGRSGASTGSWERPRVLDRGQVGRPQIAMDDQG
                     NALAAWHHRNQADEGVYICRYYADQRGWDVVPRRLDTARTQAQAPEIAMNCRSELAVV
                     WHEQEEGQVRICARHMLGSEETWVPYPMTLQVAPGRVHSLHTAMDLAGNIHAVWCLGV
                     PGDYRVYTSGFHAEEGAWDQAPTPLGDASPAPLFPQLALSDAGQGLVIWSTEAPGPGP
                     APDDRIVACHYDRGARSWSDRPTLVAPGRSTYLRMAMDARGNAIVLWVEKGEGGVMTL
                     HASHLDGRTIEWTQAPLLSSGRDILWPQVGLDAQGRAHAVWRQETRGTMKLFAKQYAA
                     GRWDEQRTPLVEDLGDSQAHALSVNPRGQALVLWLQHQGAQSTVCVRRFDGRAWSAHP
                     VLLGAPSRREIQSPGVVLSPGGQVAAIWRQGGPEDGYIVSAMGQA"
     gene            1534..>3462
                     /locus_tag="VFV26_01095"
     CDS             1534..>3462
                     /locus_tag="VFV26_01095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX4844782.1"
                     /translation="MSNFIPRSRGLLTLLLAAVPGLLAQTATPSAALASETPAEFKVA
                     SGSWDHERREVMIPMRDGVKLRTILLIPKGAKEAPILLTRTPYNAAELTGHAASSHLG
                     PVLQGYDNVADLIVEGGYIRVVQDVRGKHGSEGGYVMNRPLRGPLNPTEVDHSTDTYD
                     TIDWLVKHLPESNGRVGILGISYDGFLSLTALVDPHPALKAAVPMNPMVDGWRGDDWF
                     HHGAFRAQNLSYIYEQQATRANELKWWTGHHDDYDLFLQAGSTGALAKNRGMEQLGFW
                     RKITEHPAYDSFWQQQAMDRALASRPLKVPTLLVHSLYDAEDIYGALAVWKALKPKDT
                     ANLLFLAMGPWNHGGEIGDGSSLGPLKFGQDTGLQFRREILKPFLEQHLRGGGKADIP
                     AVSAFETGTNTWHKLPAWPLAGEGTAIRATPFYLEAGLKVSTAAPKAGSTPFEEYVSN
                     PAKPVPYRARPIQAVGYDAARTWPQWLTDDQREASGRTDVLAFVSEPLKEPLRIAGEP
                     MANLVASTSGTDRDWVVKVIDVYPDEVASQPGLGGYQLMVSADIFRGRYRETSAEARP
                     LKPGEPLVYRFALPAAHHVFLPGHRVMVQVQSTWFPLYERNPQTFVPNIFFAKPGDYR
                     SATQRIYHMPGQASFVELP"
BASE COUNT          544 a         1264 c         1196 g          458 t
ORIGIN      
        1 ggtgaaatta aggcattccg ggcgaacatg gtccggccgg gtgggtagga tggcggatac
       61 cccaagcctg atgcctgccc catggaggat ccccgtgtcg ctccgctcgc tgctgactcg
      121 actgctgccc ggaaggtccg gggcctccac ggggagctgg gagcggcccc gcgtcctgga
      181 ccggggccag gtgggccggc cgcagatcgc catggacgac cagggcaatg cgctggcggc
      241 ctggcaccac cggaaccagg cggacgaggg cgtctacatc tgccgctact acgccgatca
      301 gcggggctgg gacgtggtgc cccggcgcct ggacacggcc cgcacccagg cccaggcccc
      361 ggagatcgcc atgaactgcc ggagcgagct ggcggtggtg tggcacgagc aggaggaggg
      421 ccaggtgcgg atctgcgccc ggcacatgct gggctccgag gagacctggg tgccctatcc
      481 catgaccctg caggtggccc cgggccgggt gcacagcctg cacacggcca tggatctggc
      541 ggggaacatc catgcggtct ggtgcctggg cgtgcccggg gactaccgcg tctacaccag
      601 cggcttccac gccgaggagg gggcctggga ccaggccccc acccccctgg gtgacgcgtc
      661 ccccgccccg ctcttccccc agctggccct gagcgacgcg ggccagggcc tggtgatctg
      721 gagcaccgag gcgccggggc ccgggccggc gcccgacgat cgcatcgtgg cctgccacta
      781 cgaccggggc gcccgcagct ggagcgaccg ccccaccctg gtggcgccgg gccgttccac
      841 ctacctgcgc atggccatgg acgcccgggg gaacgccatc gtgctgtggg tggagaaggg
      901 cgaggggggc gtcatgaccc ttcacgccag ccatctggat ggccgcacca tcgagtggac
      961 gcaggccccc ctgctgagct cgggccggga catcctctgg ccccaggtgg gactggatgc
     1021 ccagggacgg gcccacgccg tgtggcggca ggaaacccgg gggaccatga agctcttcgc
     1081 caagcagtac gccgcggggc ggtgggacga gcagcgcacg cccctggtgg aggatctggg
     1141 cgacagccag gcccacgcgc tctccgtcaa cccccggggc caggcgctgg tcctctggct
     1201 ccagcaccag ggcgcccagt cgaccgtgtg cgtgcggcgc ttcgatggcc gggcctggag
     1261 cgcccatccg gtgctgctgg gggctcccag ccgccgggag atccagagcc cgggcgtggt
     1321 gctgtccccc gggggccagg tggccgccat ctggcgccag ggcggcccgg aggacggcta
     1381 catcgtgagc gccatggggc aggcctgagg cctccgggat cgtggcggga aggcgaggcg
     1441 gggtagactg gcccttccct tccagcccgc caaggcttca tccgccccga tcttggcgtc
     1501 ccgggcgccc cggaaggccc gccggagggc gccatgtcca acttcatccc gcgatcccgg
     1561 ggtctcctga cgctcctgct ggcggcggtc ccgggcctgc tggcgcagac cgcgaccccg
     1621 tccgcggccc tggccagcga gacgcccgcc gaattcaagg tggcctccgg cagctgggac
     1681 cacgagcgcc gcgaggtcat gatccccatg cgggacgggg tgaagctgcg gacgatcctc
     1741 ctcatcccga agggcgcgaa agaggccccc atcctgctca cccgcacgcc ctacaacgcc
     1801 gcggaactga cgggccacgc ggccagttcc catctgggcc ccgtgttgca gggctacgac
     1861 aacgtggcgg acctcatcgt ggagggcggc tacatccgcg tggtgcagga cgtgcgcggc
     1921 aagcacggct ccgaaggcgg ctacgtgatg aaccggcccc tgcgcgggcc cctgaatccc
     1981 acggaggtcg atcacagcac ggacacctac gacaccatcg actggctggt gaagcacctg
     2041 ccggaaagca atggccgcgt gggcatcctg ggcatctcgt acgacgggtt cctgtccctg
     2101 acggccctgg tggatcccca cccggccctg aaggcggcag tgcccatgaa ccccatggtg
     2161 gacggctggc gcggcgacga ctggttccac cacggggcct tccgcgccca gaacctgagc
     2221 tacatctacg aacagcaggc cacccgcgcc aacgagctga agtggtggac cggccaccac
     2281 gacgactacg atctgttcct gcaggcgggc tccacgggcg ccctggccaa aaaccgcggc
     2341 atggagcagc tgggcttctg gcggaagatc accgagcacc ccgcctacga cagcttctgg
     2401 cagcagcagg ccatggacag ggccctggcc agccgcccgc tgaaggtgcc caccctgctg
     2461 gtccacagcc tctacgatgc cgaggacatc tacggcgccc tggcggtgtg gaaggcgctg
     2521 aagccgaagg acaccgcgaa cctgctgttc ctggccatgg gcccctggaa tcacggcggc
     2581 gaaatcgggg acggcagcag cctcgggccc ctgaagttcg gccaggacac gggcctccag
     2641 ttccgccgcg agatcctgaa acccttcctg gagcagcacc tgaggggcgg cgggaaggcg
     2701 gatatccccg cggtgagcgc tttcgaaacg ggcaccaaca cctggcacaa gctcccggcc
     2761 tggcccctgg cgggcgaagg cacagccatc cgcgccacgc ccttctacct ggaggcgggc
     2821 ctgaaggtct ccaccgccgc gccgaaggcg gggagcaccc ccttcgagga gtacgtgtcg
     2881 aaccccgcca agcccgtgcc ctaccgggcc cggcccatcc aggccgtggg ctacgacgcg
     2941 gcccggacct ggccccagtg gctcacggat gaccagcgcg aagcctcggg ccgcacggac
     3001 gtgctggcct tcgtgtccga acctctgaaa gaacccctgc gcatcgccgg cgagcccatg
     3061 gcgaacctgg tggcctccac cagcggcacc gaccgcgact gggtggtgaa ggtcatcgat
     3121 gtctaccccg acgaggtggc cagccagccc ggcctgggcg gctaccagct catggtgtcg
     3181 gcggacatct tccggggccg ctaccgagaa acctccgcgg aggcccggcc cctgaaaccc
     3241 ggcgagccgc tggtctaccg cttcgccctg cccgcggccc accacgtgtt cctgccgggc
     3301 caccgggtca tggtgcaggt gcagtccacc tggttccccc tctacgagcg caacccccag
     3361 accttcgtgc ccaacatctt cttcgcgaag cccggcgact accgcagcgc cacccagcgc
     3421 atctaccaca tgcccggcca ggccagcttc gtggagctgc cg
//
LOCUS       DASUDT010000049         5394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_267790, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000049 DASUDT010000000
VERSION     DASUDT010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267790"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..1353)
                     /locus_tag="VFV26_01100"
     CDS             complement(190..1353)
                     /locus_tag="VFV26_01100"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX4844783.1"
                     /translation="MEPVLLSFHAPVHDLDQVAQHVVRDGVPARLREWQRASGARELV
                     YLATCQRVLWMVWGGDPGALDPGPGVRRYEGEEAWVHLLAMSAGLESANLGDREIPGQ
                     MKDALEQARQVGVAGEEAHAVIEDVVREGQRLRSRLGLADGNVSVATVALKHLCEGLS
                     EGASVALVGVGPMTQYLAQRLPEHGFKVMIANRTRSKAHDLADPLGLETVDLAQLQHD
                     PAGFDAIVTATAAPEPIFTLDAWQSLKRPILRILDLALPPDSEPGLEQLPWVHRIDLN
                     AFLAQTATARAQRAEAASKAEAFLVGAAGRLRHRAHARGHKRHLSSAQERLDSAWGAL
                     EAEVKALEDSMQGLDEAQREALKEILTRGRTLAFRALIQTQTKPTPNAEADQP"
     gene            complement(1429..2559)
                     /gene="aroC"
                     /locus_tag="VFV26_01105"
     CDS             complement(1429..2559)
                     /gene="aroC"
                     /locus_tag="VFV26_01105"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEX4844784.1"
                     /translation="MLFDSPSSFGRAFRIVTFGESHGAAVGVVLDGVKPGLSFDLEAI
                     QKELDRRRPGQSDLVTPRNEADRVQVLSGVFEGRTTGHPIALVVFNENQRSSDYQAIS
                     DLFRPGHADLTYDRKYGLRDPRGGGRSSGRETLARVAAGAWAKQQLAASGVTVRGFNR
                     EIAGIAGTAVDWAFVEANPLRSADPGAFPAQRAAVEAARSEGDSVGGVCEVWIEGLPM
                     GLGDPAFGKLDGLLALACMSIGAVKGVELGAGFDSARRRGSENNDPLGPEGPLKNDAG
                     GTLGGISTGAPVVVRLAVKPTSSISKTQRTIDREGHSADISTKGRHDPCIAPRIVPVA
                     EAMCALVIYDAWLSQQALREGSVASLPEWNWEGIEALFARSL"
     gene            2677..4353
                     /locus_tag="VFV26_01110"
     CDS             2677..4353
                     /locus_tag="VFV26_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844785.1"
                     /translation="MAPAHGPECQLARRNRRFHRFSWALLLAQGALSAQAPILEDEAE
                     ALRQKEIQWAILPWLPLPPPATDHPWGFHKMGMVALSSTDGAWVPLSQGQGLGTTRSG
                     TGMALALGGRSGGLEFAATVLFLDDPKGTREGHLHTGHLAYQTRNGWRFALENSPMKW
                     GYGPLGGHLLGMSAPPFPKARITTRVFEPSLGGRGLGRWHLDGFLGQLERHRTVPQWQ
                     GSYLGLSEAARQRGGLLSRPYQSGWKINAEFAETIQISFGVTSMWGGLLPDGTDRMKG
                     LHWLHYPMAALGGENTLLAEAEKSNVADPSYYRALSNGIGSFDIRIRNRLIANLFRAE
                     GAYWYYERSGENINWQWKTFLRNPIRAIAHDVAHPRNPWNNGTWAAVPSFSLPTHAWG
                     LQIHWPSWQLGAEVRDSATHQSHPFAYQTYQSATYLGGHSREGDSLGILFGGTYLTGT
                     LALDWQPREGLRLRGLLAQGARGFVDDATLWAQAHPAGLQPQRNILRYAEFGFSWALS
                     GGWEAGGTLGLKHEIHPSYEPGSRSSYSVMFSLGKALGASRRHEPQSRGW"
     gene            4424..>5394
                     /locus_tag="VFV26_01115"
     CDS             4424..>5394
                     /locus_tag="VFV26_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844786.1"
                     /translation="MPFATHFISLPFLAAMASPPFTVREAILAEWARQPMAWTGAQKA
                     ALAPADRARLDRSIQRIGAAGSPALLPPELDKPTADAWEAKAKAARTPQERFTALFFL
                     NRFKSPKALMALDGLGAADAAAWPKHLRLEASLATARLNGAEVSPALQDFLDALQKAG
                     KVDPVRAQAARLRLVMAGREKDLLPPVPATPGSLLALMDAWNRGPWALRRDLALTAFA
                     SPSAESPAWSRMGLSRPDPATLNLACVGILSRLSESVPKPAPVEAFEVEGASWPCAGD
                     PLAQWYGFQALAKLETPLPGLKMLMAQDRPLGAASPLMLGTLLPAMRR"
BASE COUNT          819 a         1934 c         1778 g          863 t
ORIGIN      
        1 gaggtggaga acttccgcca ggagacctca tagcccttcg attcgagata cctcaccaga
       61 ggctcggcct ggcccacggc cagggcggat ccacgggtgg caacggtgac tgttctcatg
      121 cggcacctcc tgtgccgcac cttgcgggct tcggcttcgc caaagtggaa cgacgctcct
      181 gctctgttct catggctggt ccgcctctgc gttcggggtg ggcttggttt gggtctggat
      241 cagggcccgg aaggccaggg tccggccccg ggtcaggatt tccttgaggg cctcgcgctg
      301 ggcctcgtcc agaccctgca tggaatcctc cagggccttc acctcggcct ccagggcccc
      361 ccaggccgaa tccagccgct cctgggccga ggagagatgg cgcttgtgcc cccgggcatg
      421 ggcccggtgg cggagacggc ccgcggcgcc caccaggaag gcctcggcct tggaggccgc
      481 ttcggcccgc tgggcccggg ccgtggcggt ctgggccagg aaggcgttca gatcgatgcg
      541 gtggacccag gggagctgct ccagcccggg ttcggaatcc ggcggcaggg ccaggtcgag
      601 gatgcgcagg atggggcgct tcagggactg ccaggcatcc agggtgaaga tgggctccgg
      661 ggccgccgtg gcggtgacga tggcatcgaa tccggccgga tcatgctgca gctgggccag
      721 gtccacggtc tccagtccca ggggatccgc caggtcatgg gccttgctcc gggtgcggtt
      781 ggcgatcatg accttgaagc cgtgctcggg caggcgctgg gccaggtact gggtcatggg
      841 gcccacgccc accagggcga cggaggcccc ttccgaaagc ccttcacaca ggtgcttgag
      901 ggccaccgtg gcgacgctca cattgccgtc agccagcccc aggcgggagc gcaggcgctg
      961 gccctcccgg accacatcct cgatgaccgc atgggcctct tcgccggcca cgcccacctg
     1021 gcgggcctgc tccagggcgt ccttcatctg gccggggatt tcgcgatcgc ccaggttggc
     1081 ggattccagg cccgcggaca tggccagcag atgcacccag gcctcttcgc cttcgtagcg
     1141 ccggaccccc ggacccggat ccagggcgcc ggggtcgccc ccccagacca tccagagcac
     1201 ccgctggcag gtggccaggt agaccagctc ccgggcgccg gaggcccgct gccactcgcg
     1261 gaggcgggcg ggcacaccgt cccgcaccac gtgctgggcc acctggtcca ggtcgtggac
     1321 gggggcgtgg aagctgagga ggacgggttc catatcggat ccgattgtca gttgggctgg
     1381 aagggtcaag gtcatcgctt cgtcatgcgg ccgcgaacgt ggcggtcatc acaatgatct
     1441 tgcgaacagc gcctcgatgc cttcccagtt ccattccggc agggacgcca ccgagccctc
     1501 ccggagggcc tgctggctca gccacgcgtc atagatcacc agggcgcaca tggcttccgc
     1561 cacgggcacg atgcgggggg cgatgcaggg atcgtgacgc cccttggtgg agatatcggc
     1621 ggagtggcct tcgcggtcga tggtccgctg agtcttggag atcgaactgg tgggcttcac
     1681 cgccagacgc accaccacgg gggcgccggt gctgatgccc cccagggtgc cgccggcatc
     1741 gttcttcagg ggcccctccg gacccagtgg gtcgttgttc tcgctgccgc ggcgcctggc
     1801 gctgtcgaag cccgcgccca gctccacgcc cttcaccgcg ccgatggaca tgcaggccag
     1861 ggccagcagg ccgtcgagtt tcccgaaggc cgggtctccc agccccatgg gcaggccctc
     1921 gatccacact tcgcagacgc cgcccacgct atcgccctcg gaacgcgcgg cctccaccgc
     1981 ggcgcgctgg gccgggaaag cgccgggatc cgccgaccgg agggggttcg cttccacgaa
     2041 ggcccagtcc accgcggtgc ccgcgatgcc cgcgatctcc cggttgaacc cgcgcacggt
     2101 cacacccgat gcagccagct gctgcttggc ccaggccccc gccgccaccc gcgccagggt
     2161 ctcccggcca ctgctgcgcc ccccgccccg cgggtcgcgg aggccgtact tccggtcata
     2221 ggtgaggtcc gcatggcccg gccggaacag gtccgagatg gcctggtagt cgctgctgcg
     2281 ctggttctcg ttgaacacca ccagggcgat gggatgcccc gtggtgcggc cctcgaagac
     2341 cccgctgagc acctgcaccc ggtccgcctc gttccggggg gtcaccaggt ccgactgtcc
     2401 cgggcggcgc cggtcgagtt ccttctgtat ggcctccaga tcaaaggaga gtcccggctt
     2461 caccccgtcc agcaccacgc ccacagctgc cccgtggctt tcgccgaacg tgacgatgcg
     2521 gaaggcccgg ccgaaggatg atggggaatc gaaaagcatg ctgggccctg ggttgatctg
     2581 aaatcgcgtc cttctccact atgactggta tccgtgaact aagattcttc aatccagcat
     2641 gaatgcacat ggacacccca acccaaggat tgcctgatgg ctccggcaca cggccctgaa
     2701 tgtcagctcg cccggagaaa tcggcggttt caccggttct cctgggccct cctgctggct
     2761 cagggcgccc tgtccgccca ggcccccatc ctcgaggacg aggcggaggc cctgcgccag
     2821 aaggaaatcc aatgggccat cctcccctgg ctcccactgc ctcccccagc caccgatcat
     2881 ccctggggct tccacaagat ggggatggtg gccctttcca gcacggacgg cgcctgggtg
     2941 cccctgagcc agggccaggg ccttggcacc acccggtcgg gaaccggaat ggcgctggcg
     3001 ctcggcggcc ggtccggagg gttggagttc gctgcgacgg tgctgtttct cgatgatccg
     3061 aagggcaccc gtgaaggcca cctccatacg gggcatctgg cctaccagac ccgcaacggc
     3121 tggcggttcg ccctggagaa cagccccatg aagtggggtt acggccccct gggagggcac
     3181 cttctgggca tgtccgcccc gcccttcccc aaggccagga tcaccacccg ggtcttcgag
     3241 cccagcctgg ggggcagagg cctggggcgc tggcaccttg acggcttcct gggccagctg
     3301 gaacgccatc ggacggttcc ccagtggcaa ggcagctatc tggggttatc ggaggcggcc
     3361 cggcagcggg gcggactgct ctcccgcccc tatcaaagcg ggtggaagat caacgcggag
     3421 tttgccgaga ccatccagat cagcttcggt gtcaccagca tgtggggcgg cctcctgccg
     3481 gacggcacgg accggatgaa ggggttgcat tggctgcact accccatggc tgccctgggg
     3541 ggggagaaca ccctgctggc tgaggcggag aaatcgaacg tcgctgatcc gtcctattac
     3601 cgcgccctca gcaatggcat cggcagtttc gacatccgca tccggaacag gctgatcgcc
     3661 aatctgttcc gggccgaggg cgcgtactgg tactacgaac ggagcggaga aaacatcaac
     3721 tggcagtgga agacgtttct gcggaacccg atccgtgcca tcgcccatga tgttgcccac
     3781 ccgagaaacc cttggaacaa cggcacctgg gccgccgttc ccagcttctc cttgccgacc
     3841 catgcctggg gccttcaaat ccactggccc tcctggcaac tcggggccga ggtccgggat
     3901 tcagccaccc atcagtcaca tccgttcgcc taccagacgt accagagcgc aacgtatctt
     3961 ggcgggcatt ccagagaggg ggattccctc ggcatcctct tcggcggaac ctacctgacc
     4021 gggacgctcg cccttgattg gcagccccgc gagggcctgc gcctgcgcgg gctgctggcc
     4081 cagggcgcgc gcggattcgt ggatgacgcc accctgtggg cccaggcgca ccctgccggc
     4141 cttcagcccc agcggaacat cctccgctat gccgaattcg gtttctcctg ggccctctcc
     4201 ggcgggtggg aggccggtgg aaccctcggc ttgaaacacg agatccatcc cagctacgag
     4261 ccgggaagcc gttccagcta ttccgtcatg ttctccctcg gcaaggccct gggggcatcg
     4321 cggaggcacg agcctcagtc ccgtggatgg tgatgtcatg catcgcgggg ccccacccca
     4381 gcctcggcta tgacaatctc gaagccagtc cctggagccc accatgccct tcgccactca
     4441 tttcatcagc ctgcccttcc tggcagcgat ggcctcgcct cctttcaccg tccgcgaggc
     4501 catcctggcg gagtgggcgc ggcagcccat ggcctggacc ggggcccaga aggccgccct
     4561 ggccccggcg gaccgggcgc ggctggatcg gtccatccag cgcatcggcg cggcgggaag
     4621 ccctgccctg ctgccgccgg aactggacaa acccacggcg gacgcatggg aggccaaagc
     4681 caaggcggcc cgcacgcccc aggagcggtt cacggccctg ttcttcctga accggttcaa
     4741 gagcccgaag gcgctcatgg ccctggacgg cctcggcgcc gctgacgccg ccgcctggcc
     4801 gaagcacctg cgcctggaag cctccctcgc caccgcccgc ctgaatggcg ccgaggtatc
     4861 cccggccctg caggacttcc tagacgccct ccagaaagcc ggcaaggtgg atcccgtccg
     4921 ggcccaggcc gcccgcctgc ggctggtgat ggcaggcagg gaaaaggacc tgctgccccc
     4981 ggtgccggcc accccgggga gcctgctcgc cttgatggat gcctggaacc ggggcccctg
     5041 ggccctccgc cgtgacctcg cgctgacggc cttcgcctcg ccctcagcgg aatccccggc
     5101 ctggtcccgg atgggcctct cccggccgga tcccgccacc ctcaatctgg cctgcgtggg
     5161 catcctctcc aggctgagcg agagtgtccc caaacccgcc ccggtggagg ccttcgaggt
     5221 cgaaggcgcc tcctggccct gcgctggcga ccccctggcc cagtggtacg ggttccaggc
     5281 gctggccaag ctcgaaacgc ctctgcccgg cctgaagatg ctcatggccc aggaccgtcc
     5341 cctgggtgcc gccagccccc tgatgctggg cacgctgctt ccggccatgc gccg
//
LOCUS       DASUDT010000050         5786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1107141, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000050 DASUDT010000000
VERSION     DASUDT010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5786
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107141"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VFV26_01120"
     CDS             <1..1033
                     /locus_tag="VFV26_01120"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX4844787.1"
                     /translation="ITTQVLKELGSEAWVYSAPAGHPPYLEAVGRWLASEGEPIDEGW
                     GIRSLPGAQSGLALALESFTVPGDRVLVESPCYVGILALIRALGREAVPVPVDRQGLD
                     PERLASALQRSEAKLLFTVPSFHNPTGMTQSKARRERVLAVARAHGVIVVTDSAYGDL
                     RFSGTSLPPFRRLEGADHVIHLGSFSKSLAAGLRLGYLIAKDELLRRMAPIQEVQTIG
                     QPPLLQAVVARFLDTGGFRRHLARLRRALKERRDAMVEALAEHFPPGTQVSEPKGGMH
                     LWVVMPEDFSALDLHRDALQHGIGFAPGPLFFADGRGTNCLRLNFSTHDPATTRDAIA
                     RLGHLVHRA"
     gene            1069..2169
                     /locus_tag="VFV26_01125"
     CDS             1069..2169
                     /locus_tag="VFV26_01125"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEX4844788.1"
                     /translation="MSTSTLEIRPSDHAASPEERAKRMTNPGFGRVFTDHMVVIPYKE
                     GQGWGKGVLKAYGPIEMDPAASVLHYGQAIFEGFKAYHQPDGSIASFRPEANARRFNA
                     SAARLAMPELPEGLFIEAAQALIAQDRAWVPGAVGESLYMRPLMIATEAALGVRASSE
                     YLFILMASPSGAYFPQGVKPVTVWISEDYVRAAPGGTGFAKCAGNYAASLVAQRQAKA
                     EGCDQVVWLDAIHREYIEEMGGMNIFFVYQEKGETVVVTPELTGTLLPGITRDSLLQL
                     AREQGFRAEERKITVSEWKNAIAEGRMTEVFACGTAAVITPVGHAKSRQGNWDIHQGV
                     TGPVAAKLRETLLNLQHGLAPDPHGWMRKIVG"
     gene            2292..4034
                     /locus_tag="VFV26_01130"
     CDS             2292..4034
                     /locus_tag="VFV26_01130"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4844789.1"
                     /translation="MIPVLRRALSLALLLAALLWLAGGALDRLWFDQASRLLRPHGTG
                     DASVVLIGLDEASERAFSEPMALWHRQLGAAMEALALAQPRAVGLDMSLPMRSFDGVA
                     PGGDAALLRGILRLRRACPLVLGITVDAAGLPRPIHGPFQAAAGEGGTAYVLWEVDRD
                     AVVRRFTEHFGGSSQAAPTLSGNLARALGRPVREGWLDYRGADPLPYLPFHQVVAWQR
                     AGDVPALRAAFQGKVVLIGSVFPFVDRHPQAVDISGWGEENGGFAPGVLLHAQALRNL
                     LGRGPLQQAPRWIVLGLAAASLGLGWVLGARPRLGSLGLLGALAAGTGLLLALQWQGW
                     FLGISWLLLGLAAGFGARAGREAFLRLRERRRLRAVFGGYVSPAILTQILEGRLQPGL
                     RGERRWLCVLFSDIRGFTTLSEGLEPEAVIDLLNRYFQRMAEAIHAHGGTLDKFMGDG
                     IMAFFGAPAPQEHPCRSAFHCAQAMLAALEGLNAELAAEGREPLRIGIGLHYGEAAVG
                     HVGGASRHEYTAIGDVVNTASRIEGLTKDSGYPLLVTAPVLAELDVPEAFEPLGEKPL
                     KGRAPMAVFGWPRS"
     gene            4036..4740
                     /locus_tag="VFV26_01135"
     CDS             4036..4740
                     /locus_tag="VFV26_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844790.1"
                     /translation="MRDTFRWAAMMRACGRTTFFPRAGAGLSPWLSVPALMASALPLP
                     GQATVAMVADLAGAAAFEDGSPLGITADIPALRAFTVARGGRLVLIRMATGDQFVFVG
                     PCQVRFNAKGQPEGARPAEVKPLASLQKGLVPVKLQHLAQAGLIMREKSRPDTPRDIP
                     RRVVEREPTLDDELEKLRPKADATFIERVVFATLVDRYGRRSEARKLWKALAQERPGD
                     ATLRALAEESRFLVED"
     gene            complement(5009..5098)
                     /locus_tag="VFV26_01140"
     tRNA            complement(5009..5098)
                     /locus_tag="VFV26_01140"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5062..5064),aa:Ser,seq:tga)
     gene            5182..5274
                     /locus_tag="VFV26_01145"
     tRNA            5182..5274
                     /locus_tag="VFV26_01145"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5216..5218,aa:Ser,seq:gct)
     gene            complement(5339..>5786)
                     /locus_tag="VFV26_01150"
     CDS             complement(5339..>5786)
                     /locus_tag="VFV26_01150"
                     /inference="COORDINATES: protein motif:HMM:NF015935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HEX4844791.1"
                     /translation="AGQLWAALELSRRAQRGSDRPRITSPRAAGSYLLPRCQGWTEER
                     FGLLALNAKGDLLAERILSHGTATATLISPREFFREALRYGASTALAFHNHPSGDPAP
                     SREDIQLTRRLQAAGESLGVPLADHLILGNDRYHSFRAAEGWDQRP"
BASE COUNT          785 a         2079 c         2054 g          868 t
ORIGIN      
        1 catcaccacc caggtgctca aggagcttgg ctccgaggcc tgggtgtact ccgcgcccgc
       61 gggccatccg ccctacctgg aggccgtggg ccgctggctg gcctcggaag gtgagcccat
      121 cgatgagggc tggggcatcc gctccctccc cggggcccag tctggcctgg ccctggccct
      181 ggaatccttc acggtgcccg gcgaccgcgt gctggtggaa agcccctgct acgtgggcat
      241 cctggccctc atccgggccc tgggccgcga ggcggtgccc gtgcccgtgg accgccaggg
      301 cctggatccc gagcgcctgg cctcggccct ccagcgcagc gaggccaagc tgctcttcac
      361 cgtgcccagc ttccacaatc ccacgggcat gacccagtcc aaggcccgcc gcgagcgggt
      421 gctggcggtg gcccgggccc acggcgtgat cgtggtgacg gattccgcct acggcgacct
      481 gcgcttctcc ggcacctccc tgccgccctt ccgccgcctg gagggggccg accacgtcat
      541 ccacctgggc agcttctcca agtcgctggc cgcgggcctg cgcctgggct acctcatcgc
      601 gaaggacgag ctgctgcgcc gcatggcgcc catccaggag gtgcagacca tcggccagcc
      661 gcccctgctg caggcggtgg tggcccgctt cctggacacg ggcggcttcc ggcgccacct
      721 ggcccggctg cgccgcgccc tcaaggagcg ccgcgacgcc atggtggagg ccctggccga
      781 gcacttcccc ccgggcaccc aggtgtcgga acccaagggc ggcatgcacc tctgggtggt
      841 gatgcccgag gacttctccg ccctggatct ccaccgcgac gccctgcagc acggcatcgg
      901 cttcgcgccg gggccgctct tcttcgccga tggccggggc accaactgcc tccggctgaa
      961 cttctccacg cacgaccccg cgaccacccg ggacgccatc gcgcggctcg gccacctggt
     1021 ccaccgggcc tgaccacccc ccttcaagga gcgaccgtga atgccgtgat gtccacctcc
     1081 accctcgaaa tccgcccctc ggaccatgcc gccagccccg aggagcgtgc gaagcgcatg
     1141 accaatcccg gcttcggccg cgtgttcacc gaccacatgg tggtgatccc ctacaaggag
     1201 ggccagggct ggggcaaggg cgtgctgaag gcctacggcc ccatcgagat ggatcccgcc
     1261 gcctcggtgc tgcactacgg ccaggccatc ttcgagggct tcaaggccta ccaccagccg
     1321 gacggcagca tcgcctcctt ccggcccgag gccaatgccc gccgcttcaa cgcctccgcg
     1381 gcccgcctgg ccatgcccga gctgcccgag gggctcttca tcgaggccgc ccaggccctc
     1441 atcgcccagg accgcgcctg ggtgcccggc gccgtgggcg aaagcctcta catgcgcccg
     1501 ctgatgatcg ccacggaagc cgccctcggc gtgcgcgcca gcagcgaata cctcttcatc
     1561 ctcatggcca gccccagcgg cgcctacttc ccccagggcg tgaagcccgt gacggtgtgg
     1621 atctccgagg actatgtgcg cgcggccccc ggcggcaccg gcttcgccaa gtgcgcgggc
     1681 aactacgccg ccagcctcgt ggcccagcgc caggccaagg ccgagggctg cgaccaggtg
     1741 gtgtggctcg atgccatcca ccgcgagtac atcgaggaga tgggcggcat gaacatcttc
     1801 ttcgtctacc aggagaaggg cgagaccgtc gtcgtcacgc ccgagctcac cggcaccctg
     1861 ctgcccggca tcacccgcga cagcctgctg cagctggccc gcgagcaggg cttccgggcc
     1921 gaggagcgca agatcaccgt gtccgagtgg aagaacgcca tcgcggaagg ccgcatgacg
     1981 gaagtgttcg cctgcggcac cgccgccgtc atcacccccg tgggccatgc gaagtcacgg
     2041 caggggaact gggacatcca ccagggcgtg acgggccccg tggccgccaa gctgcgcgaa
     2101 accctcctca acctccagca cggcctcgcg cccgaccccc acggctggat gaggaagatc
     2161 gtcggatagc ctcacgttcc ggaaaccgaa gcgcccgccc cttggcgggc gcttccacgt
     2221 ctgggggccg ccggggaacc tgtccgccca cgggggccgg gatctgccac gctacgggga
     2281 agacctgatc catgatcccc gttctgcgcc gcgcgctttc cctcgccctg ctgctggctg
     2341 cgctcctctg gctggcgggc ggcgccctgg accgcctgtg gtttgatcag gcctcccggc
     2401 tgctgcggcc gcatgggacc ggggatgcct ccgtggtcct gatcgggttg gacgaggcca
     2461 gcgagcgggc cttctccgag cccatggccc tgtggcaccg gcagctgggc gcggcgatgg
     2521 aagccctggc cctggcgcag ccccgggccg tgggcctgga catgagcctg cccatgcgga
     2581 gcttcgatgg cgtcgcgccc ggtggcgacg cggcgctgct gcggggcatc ctgcgcctgc
     2641 gccgggcctg ccccctggtg ctgggcatca cggtggatgc cgcgggcctt ccgcggccca
     2701 tccacggacc cttccaggcc gccgcgggcg agggcggcac ggcctacgtg ctctgggagg
     2761 tggaccggga tgcggtggtg cggcgcttca ccgagcactt cgggggctcg tcgcaggcgg
     2821 cgcccaccct ttcgggcaac ctggcgcggg ccctggggcg gcccgtgcgc gagggctggc
     2881 tggactaccg gggcgcggat cccctgccgt acctgccctt ccaccaggtg gtggcctggc
     2941 agcgcgccgg cgatgtcccg gccctgcggg cggccttcca ggggaaggtg gtgctgatcg
     3001 ggagcgtgtt cccctttgtg gaccgccacc cgcaggcggt ggacatcagc ggctggggcg
     3061 aggagaacgg cggcttcgcc cccggtgtcc tgctccacgc ccaggccctg cgcaacctcc
     3121 tggggcgagg gcccctgcag caggcgccgc gctggatcgt cctggggctg gccgcggcga
     3181 gcctggggct gggctgggtc ctgggggcgc gtccccgcct gggaagcctg ggtctcctcg
     3241 gcgctctggc cgcggggacc ggcctgctgc tggccctcca gtggcagggc tggttcctgg
     3301 ggatctcgtg gctgctgctg gggcttgccg cgggcttcgg ggcccgggcg ggccgggagg
     3361 ccttcctgcg gctgcgggag cgccgccgcc tgcgggcggt cttcggcggc tacgtgagcc
     3421 ccgccatcct cacccagatc ctggaggggc ggctccagcc cgggctgcgg ggcgaacggc
     3481 gatggctgtg cgtcctcttc tccgatatcc gcggcttcac caccctcagc gaaggcctgg
     3541 agccggaggc ggtgatcgat ctgctcaacc ggtatttcca gcgcatggcc gaagccatcc
     3601 atgcccacgg aggcaccctg gacaagttca tgggggacgg gatcatggcc ttcttcggcg
     3661 cccccgcgcc ccaggagcat ccctgccgca gcgccttcca ctgtgcccag gccatgctcg
     3721 cggcgctgga gggcctcaat gcggaactgg ctgcggaagg ccgggagccc ctgcgcatcg
     3781 gcatcggcct ccactatggc gaagccgccg tgggccacgt gggcggtgcc tcccgccacg
     3841 agtacacggc catcggcgac gtggtgaaca cggcctcccg catcgaaggg ctcaccaagg
     3901 acagcggcta tccgctgctg gtgacggcgc cggtgctggc ggagctggac gtgcccgagg
     3961 ccttcgagcc cctgggcgaa aaacccctga agggccgggc acccatggcg gtgttcggat
     4021 ggccaaggag ctagcatgag ggataccttc cgatgggcgg ccatgatgcg ggcatgcggg
     4081 cgaacgacgt tctttcccag ggcgggggcg ggcctttccc cctggctttc cgtcccggcg
     4141 ctgatggcct cggcgctgcc cctgccgggc caggccacgg tcgccatggt ggcggatctg
     4201 gcgggcgccg cggccttcga ggacggcagc cccctgggga tcacggcgga tatcccggcc
     4261 ctgcgcgctt tcacggtggc ccggggcgga cgtctggtgc tgatccgcat ggccacggga
     4321 gaccagttcg tgtttgtggg tccctgccag gtgcgcttca acgccaaggg ccagcccgaa
     4381 ggcgcccggc ccgccgaagt gaagccgctg gcctcgcttc agaagggtct tgtgcctgtg
     4441 aagctgcagc atctggccca ggcgggcctt atcatgcgcg aaaagagccg gccggacacc
     4501 ccccgggaca tcccacggcg cgtggtggag cgggaaccga ccctggatga cgagttggaa
     4561 aagctccgcc ccaaggccga tgcgaccttc atcgagcggg tggtcttcgc caccctggtg
     4621 gatcgctacg gccgcaggag cgaggcccgc aaactctgga aggccctggc tcaggagcgt
     4681 cccggggatg cgaccttgcg ggccctcgcg gaggaatcgc ggttcctcgt ggaggattag
     4741 cggcctgcca gcctttcagt gacttcgaat cccgctccat gaaatcaaag cgccccgcag
     4801 gagcggggcg ccgttggcgg agggagcgag attccctccg gggccaccgc gtggcggcgt
     4861 cccctccggc cgcacgaaag gctggcacgc cgcttcacgg ccccaacagc ccgccgggct
     4921 gccggggcct gcggctacct gccagccttt cagtgacttc gaatcccgct ccatgaaatc
     4981 aaagcgcccc gcaggagcgg ggcgccgttg gcggagggag cgagattcga actcgcggtg
     5041 agctcgcgcc cacgtcggtt ttcaagaccg gtgccttaaa ccgctcggcc atccctccgt
     5101 gcctccatct tgaaggctgg gcgcggccct gggcaagaag ccttgtgccg aaccgccccc
     5161 aacggtaatc tggaaggcct tggagagatg ccggagtggc cgatcgggct cgcctgctaa
     5221 gcgagtgtat tgggtaaacc agtaccgggg gttcgaatcc ccctctctcc gccaccaaag
     5281 ccgccgaaag gcggcttctt cgtggcggag tgagggggga aatcccagaa tcaccggcct
     5341 agggccgctg atcccacccc tccgctgcgc ggaagctgtg gtaccggtcg tttccgagga
     5401 tgaggtggtc cgccaggggg acgccgaggg attctccggc ggcctggagg cggcgggtga
     5461 gctggatgtc ctcgcggctg ggggccgggt cgccgctggg gtggttgtgg aaggccaggg
     5521 cggtgctggc gccgtagcgg agggcctcgc ggaagaactc cctcgggctg atgagggtgg
     5581 ctgtggccgt gccgtggctg aggatgcgct ccgccagcag atcgcccttg gcgttgaggg
     5641 ccaggaggcc gaagcgctcc tcggtccagc cctggcagcg gggcagcagg tagctgccgg
     5701 cggcgcgggg gctggtgatg cgggggcgat cggagccgcg ctgggcgcgc cgggagagct
     5761 ccagggcagc ccagagctgg cccgcc
//
LOCUS       DASUDT010000051         9636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1836281, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000051 DASUDT010000000
VERSION     DASUDT010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9636
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1836281"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VFV26_01155"
     CDS             <1..278
                     /locus_tag="VFV26_01155"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX4844792.1"
                     /translation="FRKGLLDREKQSHAYIYTPRLSREELAARLIDETLQRVKGSEPL
                     PMLAAFVDLAMGQDPAVLDELEQLLKARRAEQTGLAGGPPFTWQGLP"
     gene            278..1234
                     /locus_tag="VFV26_01160"
     CDS             278..1234
                     /locus_tag="VFV26_01160"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX4844793.1"
                     /translation="MHAPGLIVVTTLLAGGLVAVGSQVLGFTYPRLRGAIGRLAPEGR
                     AHLLSLLAGLPWLLTCGILLLAFLPSFITIPGLIQDHCLPHDHHPHLCLRHGLWAPSG
                     QAWVILTALGLAGGAFWFQFLRRLVDGQRRVRTLLRLAQETDGFHLLPSAKALAFSAG
                     LLRPRTLLSSMVMTSLDEQDLKVLLAHETAHAKRRDALRLVIAEAMLMAVPRRFRRVL
                     LEDLSLACEEACDREALPQAGSPERMAEVLLRVQRLGMVTPAGQPGATGSQLPLRVRA
                     LLGAPYPPTPSWTRLLWFSPLLILLADPVHHAAETLLGLLNP"
     gene            1362..2558
                     /locus_tag="VFV26_01165"
     CDS             1362..2558
                     /locus_tag="VFV26_01165"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4844794.1"
                     /translation="MSLPVLLCPLGAQEATPVLTETQAITRALARPEWQALTQLPAKQ
                     TEGAALEARSWLSPGVEWTREQFNGIQPGKREDTFLLTQSFDLSGRRLARRDAALRRE
                     EGGKAESEQRVAGVVAQVREGFYEVLVARERLARLEGSVTRVGRFQERVDRLHQAGEM
                     SGLDRGRVRREVELLRGREVVERSRLLQAEARLRSLLGGSHGTVQGDLLPEPPATLDA
                     TVAEQPGAPATRMALAQEAAALSDAKAAGRWAPDLQLGLGVKRWQEAGLSGNGNVFSL
                     GLTFPTPGRVNAARIRGEAEARAASAQAKLQREQDGADLRALWQASVDLRVSAERMAQ
                     EALADSGRVDAALDAAFAAGELDLLGRLDGARSLLDAELAALDQAHAARRTRIALDRM
                     LGKVNP"
     gene            2555..4222
                     /locus_tag="VFV26_01170"
     CDS             2555..4222
                     /locus_tag="VFV26_01170"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4844795.1"
                     /translation="MIAATSRRPIAWALVLGLTLTGTLACNHKEGADDHAHGAAAHGH
                     EAPERPSLAPTLYADGLELFVEYAVLVAGETSTFGAHLTHLEGFQAVKDGRAEVILTG
                     AGGEQRFGGEVSATPGIFRMAPKPKAAGEVQVRILWKGPKGQATFDLGKHTVYPDLAA
                     ARKAQVPEAEGGIPFLKEQQWNVPFGTTEAKPRPLYQGFEAYGTVQAVPGGEGRVLAP
                     VAGRLDGAEMVRGGPPAREARDVPPGAPHTAIEQSPMALSTYPNVGQSVRKGQRLAAL
                     VPKAGLDLSQGTVQLDFERARLRQEQTAVNLTRMKGLLEQDAVPKRRVEEATREAALA
                     DTEFKVAQARRDEATLGRGGMAIALTAPVSGVVSAVNGGPGIQVAEGQELFHIVDTRR
                     LRLEVQVPEAQAGRLAKVASVWFQAPGVPAMLLDPNQGARMLGQGGAIHPERRTVPFL
                     VAFANPTGALKVGHTGKVFVRVGSPSQGLAIPASALQDEDGLSVVYVQAGGERFLRRI
                     VQTGARDGDWVQILGGVQPGERVVTLGAHLVRLAASSGKVPEHGHAH"
     gene            4232..7444
                     /locus_tag="VFV26_01175"
     CDS             4232..7444
                     /locus_tag="VFV26_01175"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4844796.1"
                     /translation="MLDRIIRTSLNQRHVVLLVAVLMLAWGGWTASRMPVDVLPDLTA
                     PTVTVGTEAHGMAPQEVERLITQPVESAMQGAAGVRRVRSTSHVGLSLVHVEFDWDVP
                     ILQARQVVSERLQAAVGGLPPGTPTPVLLPISSVMGEIMFVALESDQHSPMDIRAQAD
                     WEVRRRLLAVPGVSQVIPIGGEVRQYQVLLKQDRLLAYRLTAEEVAEAVRKSGESSSA
                     GFLVHQGQEYLIHGIGRLQAVSDLESALIVRRDGQPVKVKDLAEVKIGPALKRGEGSH
                     NGKPAVILAIQKQPAANTLELTRRLDQVMDEIQTTLPKGMKLEKHIFRQADFIQVAIR
                     NVVDALRDGTLLVILVVGLFLMHTRATLITAVAVPLSLVAAVLVLKAFGATLNTMTLG
                     GMALAIGDLVDDAIVDVENVLRRLRENAAKPHEHRKPFLQVVYKASMEIRSSIVYATA
                     IIVVVFTPIFFLGGVEGRMLQPLGIAFTVALGASLLVALTVTPALCAWLLHPKPRRVG
                     PPARSAGDVPPALPASSAGEACSETPPLPFDEEGRFVTWIKARYMPMLDWALPRWKGL
                     VTVGAVGLLAATLSLFFAGRSFMPEFNEGSLNVTVVCLPGTPLSVSDALGRQAEEIML
                     KHPEVVATARRTGRAELDEHGQDVFGAEIEVGLKMKDRSKEALLTALRKSLSQIPGVF
                     ISLGQPISHRVDHILSGSRAAIAVKVFGPDRLELRRIAQEVKAEMAQVEGVVDLAMEA
                     EAAQPQLAIKPDRSALASAGLTTQDFAHALELSFAGEAVAQVREGNRAFDVLVRMEPT
                     PGLDAERIGSVLVSTPTGPVPISQLAQVDHERAPAYIPREDNQRKLAVTCNVGGRDLF
                     GVVSDIQARIKDKVKLPQGYQVTYGGQFESGEGAARTLTLLGLGAIIIVFGLLFLALK
                     SFRDATLVMVNLPLAWMGGVVGLWASGGVLSVATLIGFITLFGIATRNGIMLVTHIHH
                     LHDEGLHGIEAIRQAALERLSPILMTALTAGLALVPIILRRHAPGSEIQAPMAFVILF
                     GLLSSTALNMLVVPSLYLRFGSKVGHRQPAEGGLAEPGTA"
     gene            complement(7671..8903)
                     /locus_tag="VFV26_01180"
     CDS             complement(7671..8903)
                     /locus_tag="VFV26_01180"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX4844797.1"
                     /translation="MRFPHLQDRPGPRHLAALAFSLFVLVTTACGGGGGGSSAPAPPT
                     APPYVRYAALSGADEVPANASTATGAATFSVNPATKVLTGTVTTSGISGVGAHIHEGA
                     KGVAGPIVIPLSGGSGGVWTVPAGTVLTDAQYTALQANTYYVNVHSAAYTGGEIRGQI
                     ELRVSFATLAGSQETPAVTSTATGFGSLAVNVTTGAVYGSVVTSGITGTAAHIHEAAA
                     GSAGPILIPLTDAGGGLWTVPPGATLTSAQVTSWQNGNLYVNVHTATNPSGEIRGQLN
                     LSVPLTQSASLSGASEVPVTASTATGTGAVGINPITLELSGGLSTTGITGTGAHIHEA
                     APGASGPIIVPLGDAGGGVWTIPLGTRFTSGQFASWRAGNLYLNVHSAAYPSGEIRGQ
                     LGGSGSAGGGTGGGGYGY"
     gene            complement(9040..>9636)
                     /locus_tag="VFV26_01185"
     CDS             complement(9040..>9636)
                     /locus_tag="VFV26_01185"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4844798.1"
                     /translation="IPYVTMEYLKGVTLRSLLEGRGRLPLPLALRIARQVAEGLEAAH
                     GVGVVHRDIKPANVLFDVRGDAKIMDFGLAAPVAAVVAGEAGSVVGSPRYMSPEQIRG
                     DRVDARTDLYALGVMLFELCSGLPPYDSPRINDLLALHLDAAVPSLAEAMPDLPADLG
                     ALVGRLMAKRPEDRPQSAAEVVEILKMLAASGGGTSRV"
BASE COUNT         1411 a         3463 c         3263 g         1499 t
ORIGIN      
        1 tgttccggaa gggactgctg gaccgggaaa aacagagcca cgcctacatc tacacgccca
       61 ggctatcccg cgaggaactc gccgcccggc tcatcgacga gacccttcag cgggtgaagg
      121 gttcagagcc cctgcccatg ctggccgcct tcgtggatct ggccatgggc caggacccgg
      181 cggtgctgga cgaactggag cagctcctga aggctcgccg cgccgaacag acggggttgg
      241 cgggcggtcc cccctttaca tggcaaggac tgccctgatg catgcgcccg gcctgatcgt
      301 cgtcaccacc ctcctggcgg ggggcctggt ggccgtgggg agtcaggtcc tcgggttcac
      361 ctatccccgc ctgcgcgggg ccatcggacg gctggccccc gagggccgtg cccacctgtt
      421 gagcctcctc gccgggcttc cctggctgct gacctgcggg atcctgctcc tcgccttcct
      481 gccctccttc atcaccatcc cgggactgat ccaggaccac tgccttcccc acgatcacca
      541 tcctcacctt tgcctgcgtc acgggctttg ggcaccgtcg gggcaagcgt gggtgatcct
      601 caccgccctt ggactggcgg gcggcgcgtt ctggttccag ttcctccgcc gcctggtaga
      661 cggtcagcgc cgggtgcgaa ccctgctccg cctggcccag gagaccgatg gcttccacct
      721 cctgcccagc gccaaggccc tggccttttc ggcgggcctg ctgcgaccgc gcaccctgct
      781 ctcctcgatg gtgatgacct ccctggatga gcaggatctc aaggtcctgc tggcccacga
      841 gacagcccat gccaagcgcc gggacgccct gcgcctggtg atcgcggagg ccatgctgat
      901 ggccgtgccc cggcggtttc gtcgagtcct gctagaggat ctgtccctgg cctgcgaaga
      961 agcctgtgac cgggaagccc tgccccaggc gggcagcccc gaacgcatgg cggaggtgct
     1021 gctccgcgtg cagcggctcg gcatggtgac ccccgccggg cagcctgggg ccaccggctc
     1081 ccagcttccc ctgcgagtcc gcgccctgct cggcgctccc tatcccccaa caccttcgtg
     1141 gacccgcctc ctctggttca gccctctgct gatcctgctg gcggatcccg tccaccacgc
     1201 cgccgagacc ctgctcggac tcctcaaccc ctgatatgca tcctggtcgg gggacccgcc
     1261 caggatgtct gacgcttccc caatcccgtt gatctgaccc ggtggtgtcc atggttttcc
     1321 agtctcgaag tctgctcaaa agtccgaccc tgaatcggtt tttgtcactg cctgtcttgc
     1381 tctgtcccct gggcgcccag gaagcgactc cggttctgac ggagacccag gccatcaccc
     1441 gcgccctggc ccgccccgaa tggcaggcgc tgacccagct ccccgccaaa cagacggagg
     1501 gtgcggcgct ggaggcacga agctggctct cgcccggcgt ggagtggacc cgcgagcagt
     1561 tcaacgggat ccagcccggc aagcgggagg acacgttcct cctcactcag agcttcgacc
     1621 tctccggtcg ccggttggcc cggcgggatg cggcgctccg gcgggaggag ggcggcaagg
     1681 cggagagcga acagcgggtg gcgggggtcg tcgcccaggt gcgcgaaggg ttctacgagg
     1741 tgctggtggc ccgggaacgc ctcgcccggc tggagggctc cgtcacgcgc gtgggccgct
     1801 tccaggaacg ggtggaccgc ctgcatcagg ccggcgagat gtccggcctc gaccggggcc
     1861 gggtccgacg cgaggtcgaa cttctgcggg ggcgcgaggt ggtcgagcgc tcccggctgc
     1921 tgcaggccga ggcccggctg cggtcccttc tgggaggcag ccatggcacc gttcagggcg
     1981 acctcctccc cgagccgcct gccaccctgg acgccaccgt ggccgaacag cccggcgccc
     2041 ctgcgacccg catggccctg gcccaggaag cggcagccct gtccgatgcc aaggccgcgg
     2101 gccggtgggc gccggatctc cagctcggcc tgggtgtgaa gcggtggcag gaggctgggc
     2161 tcagcggcaa cggcaacgtg ttctccctgg ggctgacctt cccgacaccg gggcgcgtca
     2221 acgcagccag gatccggggc gaggccgagg cccgtgcggc ctccgcccag gcgaagctcc
     2281 aacgggaaca ggatggggcc gaccttcgcg ccctctggca ggcatccgtg gacctgcggg
     2341 tctccgctga gcgcatggcc caggaggccc tcgcggattc gggacgggtg gacgctgcgc
     2401 tggatgccgc ctttgccgct ggagagctgg atctcctggg acgcctggat ggcgcccgga
     2461 gccttctcga cgccgaactg gccgccctgg accaggccca cgccgcccgc aggacccgca
     2521 tcgccctcga tcgcatgctc ggaaaggtga atccatgatc gctgccacgt cccgccgccc
     2581 catcgcctgg gctctcgttc tggggcttac cctcaccggc accctggcct gcaaccacaa
     2641 ggaaggggcc gacgaccatg ctcacggagc cgcggcccac gggcacgaag cccctgagcg
     2701 gccctccctg gccccgaccc tctacgccga tggcctggag ctgttcgtcg aatacgccgt
     2761 gctggtggcc ggggagacct ccaccttcgg ggcccacctc acgcacctgg agggcttcca
     2821 ggccgtgaaa gatggtcgcg ccgaggtgat cctcaccggc gcaggcggcg agcagcggtt
     2881 cgggggcgag gtctcggcga cgcccgggat cttccgcatg gcgcccaagc ccaaggctgc
     2941 gggggaagtc caggtccgca tcctgtggaa gggccccaag ggccaagcca ccttcgacct
     3001 ggggaagcac acggtctacc ccgatctggc cgccgccagg aaggcccagg tgcccgaggc
     3061 cgagggcggc atccccttcc tgaaggagca gcagtggaac gtgcccttcg ggacgaccga
     3121 agcgaaaccg cgtcccctct accagggctt tgaagcctac gggaccgtcc aggcggtgcc
     3181 gggcggcgag ggtcgcgtgc tggcccccgt ggcgggccgc ctcgacggcg ccgaaatggt
     3241 ccgaggggga ccgcctgctc gcgaagctcg cgatgtcccc cccggagccc cccacacagc
     3301 catcgagcaa agcccgatgg ctttgtccac ctatcccaac gtgggtcagt cggtccggaa
     3361 gggacagcgc ctcgcggcgc tggtgcccaa ggctggcttg gatctctccc agggcaccgt
     3421 gcagctcgac ttcgagcggg cccggctgcg ccaggaacag accgcggtca atctcacccg
     3481 catgaagggg ctgctggagc aggacgcggt gcccaagcgc cgggtggagg aagccacccg
     3541 cgaagcggcc ctggcggaca ccgagttcaa ggtggcccag gcccgcaggg acgaggccac
     3601 cctgggccgg ggcggcatgg ccatcgccct cacggccccg gtgtccggcg tggtgagcgc
     3661 ggtgaacggc ggcccgggca tccaggtggc cgaaggccag gaactcttcc acatcgtaga
     3721 cacccggcgc ctccgcctgg aggtgcaggt gcccgaggcc caggcgggcc ggctggccaa
     3781 ggtggccagt gtgtggttcc aggccccggg cgtgcccgcc atgctgctcg atcccaacca
     3841 gggggcccgg atgctcggcc agggaggtgc catccacccg gagcgccgga cggtgccctt
     3901 cctggtggcg ttcgccaatc ccaccggggc cctgaaagtg ggccataccg gcaaggtgtt
     3961 cgtccgcgtg ggcagcccca gccagggcct cgccatcccg gcctccgccc tccaggacga
     4021 ggacggcctt tccgtggtgt atgtccaggc cgggggcgaa cgcttcctcc gccgcatcgt
     4081 gcagaccggc gcgagggatg gggactgggt gcagatcctc ggcggagtcc agcccggtga
     4141 gcgggtcgtg accctggggg cccacctcgt gcgtctggcg gccagctcgg ggaaggtccc
     4201 cgagcatggc catgctcatt aggggatcgt gatgcttgat cggatcatcc gaacctccct
     4261 aaaccagcgc catgtggtgc tgctggtggc cgtcctgatg ctcgcctggg gcggctggac
     4321 cgccagccgc atgcccgtgg atgtgctgcc cgaccttacc gcccccacgg tcaccgtggg
     4381 caccgaggcc cacggcatgg ccccccagga agtggagcgc ctcatcaccc agccggtgga
     4441 gagcgccatg cagggcgcgg caggtgtccg ccgcgtccgg tccaccagcc atgtggggct
     4501 gtccctggtg catgtggagt tcgactggga tgtgcccatc ctccaggccc ggcaggtggt
     4561 ctccgagcgc ctccaggcag cggtgggggg gcttccccca ggcacgccca cgccggtgct
     4621 cctccccatc agctccgtca tgggcgagat catgttcgtg gccttggaga gcgaccagca
     4681 ctcccccatg gacattcggg cccaggctga ctgggaagtc cggcgacggc ttctcgccgt
     4741 gcccggtgtg agccaggtca tccccatcgg cggtgaggtc cgccaatacc aagtgctgct
     4801 caagcaggac cgcctgctgg cctaccggct caccgccgag gaggtcgccg aggccgtcag
     4861 gaagtccggg gagagttcct cggcgggctt cctggtgcat cagggccagg agtatctgat
     4921 ccacggcatc gggcgccttc aggcggtctc cgatctggag tcagccctga tcgtccggcg
     4981 ggacggccag cccgtgaagg tcaaggacct cgccgaggtg aagatcggcc ccgccctcaa
     5041 gcggggtgaa ggcagccaca acgggaagcc tgcggtcatc ctcgccattc agaagcaacc
     5101 cgccgccaac accctggaac tgaccaggcg cctggatcag gtgatggacg agatccagac
     5161 caccctcccc aaggggatga agctggagaa gcacatcttc cggcaggcgg atttcatcca
     5221 ggtggccatc cgcaatgtgg tggatgccct ccgggatggc accctcctgg tgatcctggt
     5281 ggtgggtctg ttcctcatgc acacccgcgc caccctcatc accgccgtgg ccgtgcccct
     5341 cagcctcgtg gcggcggtcc tggtgctgaa ggccttcggg gccacgttga acaccatgac
     5401 cctgggcggc atggccctgg ccatcggcga cctggtggac gacgccatcg tcgatgtgga
     5461 gaacgtgctt agacggttgc gggaaaacgc cgcgaaacct cacgaacacc gcaagccctt
     5521 cctccaggtg gtctacaagg ccagcatgga gatccgatca tccatcgtct acgccacggc
     5581 catcatcgtg gtggtcttca cgcccatctt cttcctgggc ggcgtggaag gccgcatgct
     5641 ccagcccctg ggcatcgcct tcaccgtggc cctgggcgcg tccctgctgg tcgccctcac
     5701 ggtgactccg gccctctgcg cctggctcct gcatccaaag ccaaggcggg tgggaccgcc
     5761 tgcccgctcc gcgggcgatg tcccccccgc gctccccgcc tccagcgcag gcgaagcctg
     5821 ctcggagacc cccccccttc cgttcgatga ggaaggccgc ttcgtcacct ggatcaaggc
     5881 ccgctacatg ccgatgctcg actgggccct gccccggtgg aaggggctcg tcaccgtcgg
     5941 tgccgtgggg ctcctggcgg ccaccctcag cctgttcttc gccgggcgga gcttcatgcc
     6001 cgagttcaac gagggcagcc tgaatgtcac cgtggtctgc ctccccggca cgcccctatc
     6061 cgtttcggat gctttggggc gccaggccga ggagatcatg ctcaagcacc ccgaagtggt
     6121 ggccaccgcc cgccgcacgg gccgcgccga gctggatgag catggccagg atgtcttcgg
     6181 cgccgagatc gaggtcggcc tgaagatgaa ggaccgcagt aaggaggcgc tgctcaccgc
     6241 gctccgcaag tcgctgtcgc agatccctgg ggtgttcatc agcctgggcc agcccatcag
     6301 ccatcgcgtg gaccatatcc tcagcggcag ccgggccgcc atcgccgtga aggtcttcgg
     6361 tcccgaccgc ctggaactcc gacgcatcgc ccaggaggtg aaggccgaga tggcccaggt
     6421 cgaaggagtg gtcgacctgg ccatggaggc cgaggcggcc cagccccagc tcgccatcaa
     6481 gccggaccgc tcggccctgg ccagcgccgg gctcaccacc caggacttcg cccatgcgct
     6541 ggaactctcc ttcgcgggcg aggccgtggc ccaggtgcgc gagggcaacc gggccttcga
     6601 tgtgctggtg aggatggaac ccacaccggg cctggacgcc gagcggatcg ggtcggtgct
     6661 cgtatcgaca cccacgggcc ccgtgcccat cagccagctc gcccaggtgg accatgaacg
     6721 cgccccggcc tacatccccc gggaggacaa ccagcgcaag ctggccgtca cctgcaacgt
     6781 gggcgggcgg gacctcttcg gcgtggtctc ggatatccag gcccgcatca aggacaaggt
     6841 gaagctgccc cagggctatc aggtcaccta tggcggccag ttcgagagcg gcgaaggggc
     6901 cgcccggacc ctgaccctcc tgggccttgg cgccatcatc atcgtcttcg gcttgctctt
     6961 cctggccctc aagagcttcc gcgacgccac cctggtgatg gtgaacctgc ctctcgcctg
     7021 gatgggcggc gtggtgggcc tctgggccag cggcggcgtg ttgagcgtgg ccaccctcat
     7081 cggcttcatc acgctctttg gcatcgccac ccgcaacggc atcatgctgg tgacccacat
     7141 ccaccacctg catgacgaag ggctccacgg catcgaggcc atccggcagg ccgccctgga
     7201 acgcctcagc cccatcctca tgacggcact gacggcgggc ctggccctgg tgcccatcat
     7261 cctgcgccgc cacgcccccg gcagcgagat ccaggccccc atggccttcg tcatcctctt
     7321 cggcctgctg tccagcaccg ccctgaacat gctcgtggtg cccagcctct acctgcgctt
     7381 cggttcaaaa gttgggcatc gacagcccgc cgagggagga ttggccgaac ctgggaccgc
     7441 ttgacccagc cccctgaggg ggcatcgtgt ggtgtatgtg tggggtggcc cccaagagcg
     7501 ctcctgccag accgcaccac gactagcttc atcagcttcg atacctttct tgtgattcct
     7561 ggtgtcgccg gttcgagtcc ggtccgggcg ggttgacggc tccgacattg gctaggcaaa
     7621 agccccagcg acgccatcca atcgcgccac cggggcattt gccatgaccc ctagtatccg
     7681 taccccccgc ccccggttcc gcctccggcg ctcccggaac ccccgagctg gccccggatc
     7741 tcgccgctgg gataggcggc gctgtgcacg ttcaggtaga ggttcccggc cctccagctc
     7801 gcgaactggc cgctggtgaa gcgggtcccc agggggatgg tccacacccc gccgccggca
     7861 tcgccgaggg gcacgatgat gggtccggag gctcccggcg cggcttcatg gatgtgggcc
     7921 ccggttcccg tgatgccggt ggtgctcaac ccgccgctga gttcgagcgt gatggggttg
     7981 atgccgaccg cgcccgtgcc cgtggccgtc gaggccgtga ctggtacttc actggcgccg
     8041 gacagggagg ccgattgggt gagcgggacg ctgaggttca gctgtccgcg gatctccccg
     8101 ctggggttgg tggcggtgtg gacgttcacg tagaggttcc cgttctgcca gctggtcacc
     8161 tgggcgctgg tgagggtggc gcccggcggc acggtccaga ggccgccgcc tgcatccgtg
     8221 agcgggatga ggatcggtcc ggcggatccg gcagcggcct cgtggatgtg ggcggcggtc
     8281 cccgtgattc cggaggtcac caccgatccg tagaccgcgc ccgtcgtgac gttcaccgcc
     8341 agggagccga agcccgtggc cgtgctggtg acggcggggg tctcctggct ccccgccagg
     8401 gtcgcgaagc tcacccgcag ctcgatctgg ccccggatct cgccgcccgt gtaggcggcg
     8461 ctgtggacgt tcacgtagta ggtgttggcc tggagcgcgg tgtactgggc gtccgtcagc
     8521 acggtgccgg ctggcacggt ccacacgccg ccggaacccc cgctcagggg gatcacgatc
     8581 gggcccgcga cccctttggc gccctcgtgg atgtgcgccc ccacgccgga aatccccgag
     8641 gtggtcacgg tccccgtgag gactttcgtg gccggattca ccgagaaggt cgcggcccct
     8701 gtggccgtgg aggcgttggc gggcacttcg tcggcccccg aaagggcggc gtagcggaca
     8761 tagggcgggg cggtcggggg ggccggggcg ctgctcccgc caccaccgcc gccgcaggcg
     8821 gtggtcacca gcacaaagag ggagaaggcc agggcggcga gatgccgcgg cccgggccgg
     8881 tcctgcagat gggggaatcg catgggctgc tcctgctcaa gggggcctcc ccttggggcc
     8941 caacatggga tcccgcccac gggcgcatca gatccgatcc gaaaatagag acccctccgg
     9001 tgggggctcc cagaggctcc ccgggccggg ccggccgcct cacacccgcg aagtcccgcc
     9061 accgctggcc gccagcatct tcaggatctc caccacctcc gcggcggact gagggcgatc
     9121 ctccgggcgc ttggccatga gccggcccac cagggcgccg aggtccgccg gcaggtccgg
     9181 catcgcctcc gccagggacg gcaccgccgc atccaggtgc agggccagga ggtcgttgat
     9241 gcgggggctg tcatagggcg gcaggcccga gcacagctcg aacagcatga cccccagcgc
     9301 gtacagatcg gtccgggcat ccacccggtc cccccggatc tgctccgggg acatgtagcg
     9361 gggcgacccg acgacgctcc cggcctcccc cgcgaccacc gccgcgacgg gagcggccag
     9421 gccgaaatcc atgatcttgg cgtcgccccg cacatcgaac aggacattgg ccggtttgat
     9481 gtcccggtgg accaccccga ccccgtgggc ggcctccagc ccttccgcca cctgacgggc
     9541 gatgcgcagc gccagcggca gcggcaggcg gccccgcccc tccagcaggc tccggagggt
     9601 gacccccttc aggtattcca tggtcacata ggggat
//
LOCUS       DASUDT010000052         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1173741, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000052 DASUDT010000000
VERSION     DASUDT010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173741"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFV26_01190"
     CDS             complement(<1..193)
                     /locus_tag="VFV26_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844799.1"
                     /translation="MRRLTGVATHRFREKASVFLTELHPARDGAERSATLAALRKRDF
                     DATHHCSAWREGIPVTAFGA"
     gene            355..2208
                     /locus_tag="VFV26_01195"
     CDS             355..2208
                     /locus_tag="VFV26_01195"
                     /inference="COORDINATES: protein motif:HMM:NF013436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEX4844800.1"
                     /translation="MPTDLAIAQAATLKPISQVASELGLGEDELEHYGPTKAKVRLEV
                     LERLRTRPDGKYIDVTAITPTPLGEGKTTTTVGLSQALGAHLGQRVLTCIRQPSQGPT
                     FGIKGGAAGGGYSQVIPMEDFNLHLTGDIHAITAAHNLCAAAIDARILHEAGASDEQL
                     FERIFPAGKSGRKFPRSLQLRCAKLGITKGNPEDFTPEERRRVCRLDLDPGAISWRRV
                     LDTSDRFLRGVTIGQGDEEQGFARETGFDIAVASEIMAVLALTTGLQDMRRRLGAMVV
                     GLDRQGGAVTAEDLGVAGAMTVLMKDALKPTLMQTLEGTPVFVHAGPFANIAHGNSSI
                     LADQIALKLADYVITESGFGADMGMEKFFDIKCRISGLVPDAVVLVATVRALKMHGGG
                     PKVVAGKPLDPVYVEENLDLLRQGLPNLLHHIRIARKFGVPVVVAVNGFATDSPAELD
                     LVRRASLESGAEDAVVCHNWALGGEGALDLARAVMRVCERPAAFRFLYGVDEPIKQKI
                     ETIAREIYGADGVDYAPEAEAAIEAYTRLGYDRLPICMAKTHLSLSHDPALKGVPTGF
                     RIPVRDIRISAGAGFLYPLLGKMATMPGLPTRPGFYDVDIDPETGRIVGLF"
BASE COUNT          395 a          822 c          801 g          353 t
ORIGIN      
        1 ccgcgccgaa ggccgtgacg gggatgccct cgcgccaggc gctgcagtgg tgggtggcgt
       61 cgaagtcccg cttgcgcagg gcggccaggg tcgccgagcg ctccgcgccg tcccgggccg
      121 ggtgcaactc ggtgaggaag acggaggcct tctcacggaa acggtgggtg gcaaccccgg
      181 tcaggcgacg catggatcca gcatggatgc gggtgtgacg ggaatcaaca catggagtcc
      241 aatgctgatc acgcggtcat ttttgcttat agttggggtg gatctttccg aggagacggc
      301 atggacaccg tcgcgcggcc cttctcaccg acccttctgc agcggaggac tccggtgccg
      361 acggacctgg cgatcgccca ggccgccacc ctcaaaccca tcagccaggt ggcttccgag
      421 ctgggcctcg gcgaggacga gctcgagcac tacggtccca ccaaggccaa ggtgcggctg
      481 gaggttcttg aacgcctgcg gacacgcccc gatggcaagt acatcgatgt caccgccatc
      541 acgcccacgc ctctggggga gggcaagacc accaccaccg tgggcctcag ccaggccctg
      601 ggcgcccacc tgggccagcg cgtgctcacc tgcatccgcc agcccagcca ggggcccacc
      661 ttcggcatca aggggggcgc cgcggggggc ggctacagcc aggtgatccc catggaggac
      721 ttcaacctcc acctcaccgg ggacatccac gccatcaccg cggcccacaa cctgtgcgcg
      781 gcggccatcg acgcccgcat cctccatgag gcgggggctt cggacgagca gctgttcgag
      841 cggatcttcc ccgcggggaa atccggaagg aagttcccgc ggtcgcttca gctgcgctgc
      901 gcgaagctgg gcatcaccaa ggggaatccc gaggatttca cgccggaaga gcgccgtcgc
      961 gtctgtcgcc tggacctgga ccccggggcc atctcctggc gccgggtgct ggacaccagc
     1021 gaccgcttcc tccgcggcgt caccatcggc cagggggatg aagagcaggg cttcgcccgc
     1081 gaaaccggct tcgacatcgc cgtggccagc gagatcatgg ccgtgctggc cctcaccacg
     1141 ggcctccagg acatgcggcg ccgcctgggc gccatggtgg tgggcctcga ccggcagggc
     1201 ggggcggtca cggctgagga tctgggcgtg gcgggcgcca tgaccgtgct catgaaggat
     1261 gccctcaagc ccacgctcat gcagaccctg gagggcacgc cggtcttcgt ccacgcgggc
     1321 cccttcgcca acatcgccca cggcaacagc tccatcctgg cggaccagat cgccctcaag
     1381 ctggcggact atgtcatcac cgagtcgggc ttcggcgccg acatgggcat ggagaagttc
     1441 ttcgacatca agtgccgcat ctcgggactg gtgcccgatg cggtggtgct ggtggccacg
     1501 gtgcgcgccc tcaagatgca cggcggcgga cccaaggtgg tggcggggaa gcccctggac
     1561 cccgtctatg tggaggagaa cctggacctc ctgcgccagg gcctgcccaa cctgctgcac
     1621 cacatccgca tcgcccggaa gttcggcgtg cccgtggtgg tggccgtgaa cggcttcgcc
     1681 acggacagcc ccgccgagct ggacctggtg cgccgggcct cgctggagag cggcgccgag
     1741 gatgcggtgg tgtgccacaa ctgggccctg ggcggggaag gggccctgga cctggcccgg
     1801 gcggtcatgc gcgtctgcga gcgccccgcg gcgttccgct tcctctacgg cgtggacgag
     1861 cccatcaagc agaagatcga gaccatcgcc cgggagatct acggcgcgga cggcgtggac
     1921 tacgcccccg aagccgaggc ggcgatcgag gcctacacgc gcctgggcta tgaccgcctg
     1981 cccatctgca tggccaagac ccacctgagc ctcagccacg accccgcact caagggcgtc
     2041 cccacaggct tccgcatccc cgtgcgggac atccgcatca gcgccggagc gggcttcctc
     2101 tatcccctgc tcggcaagat ggccaccatg cccggtctgc ccacccggcc gggattctac
     2161 gacgtggaca tcgatccgga gacgggaaga atcgtcggat tgttctgatc gggcggaatt
     2221 cggcgctgcc gaattccgta gacggggctt cgccccgtaa aaccgcctaa ccatgaaagc
     2281 gacccgcgaa tgcgggccgc tttcatactc cggagcgtag ctccggagcc aagcgctaca
     2341 tgccgtcgat gatgccgttc aaggtggcgc t
//
LOCUS       DASUDT010000053         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_488836, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000053 DASUDT010000000
VERSION     DASUDT010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488836"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1147
                     /locus_tag="VFV26_01200"
     CDS             62..1147
                     /locus_tag="VFV26_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844801.1"
                     /translation="MMRRLLPGLLASVLLLGLGCKEPDGASGGTTGAALYAYDSATSS
                     VFVWTDLGTLYDSTTTTVAPSKTITSSVFSSKITSLAWGGLCFDRQNGYLYLVSDTGN
                     IVRVSNIRSQNGLVASADVVSFSLASAGRLSSSTFGQAGLDVQTGTLYITESGSSGTQ
                     IWAVPNASTQMQSATISLTPLAVNGDTGGTGVAADSGSVYAFMLSGDTVGTLTTYTGP
                     RLRKGTSSGFTGASTIIGGSTLLGQYGSLSLDTGNGYLFVARHNIDAGASAAPIQVFT
                     TGMFGQAYDQAPIATLGSAVDQPDLRVIAHAGTKDWLVGLRGVGATPYATIHLWKSPL
                     GGTAAKTITASPATSLFKGVAVDGNAS"
     gene            1144..2073
                     /locus_tag="VFV26_01205"
     CDS             1144..2073
                     /locus_tag="VFV26_01205"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HEX4844802.1"
                     /translation="MTALRLLGLLFQDVLRDLYRHRGQYLLAVLTLASGLLLAGGGLL
                     LVESLDRFAGRLEDMAKIVAYAADGKTLDEAEARLRRDPRFREVRRVSAEENRQRFQS
                     STREAGLLLESAGQDALPESLELSLRQDLAQGGKALEVAGSLRTLPGIGDVLADQERL
                     EQIQRMARMLRSALASLGVLLLLAAGFATGNVIRMSILAREDEIGIMRLVGASESFIR
                     TPLVLEGALLGFAGSLLAMLGLFGLWLPVSRGLGGLSPLLVDLARLGFFSAASMALLA
                     FVGATTGALGALWAFWTTRRAQREEAALMEGAG"
     gene            complement(2338..2910)
                     /locus_tag="VFV26_01210"
     CDS             complement(2338..2910)
                     /locus_tag="VFV26_01210"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF004685.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEX4844803.1"
                     /translation="MGLRFTLAITGASGSAFGVATLKRLSANPSVEQVALLLSPTGKR
                     CLLDETGLTPKDLAALPKVALRDERDLGADISSGSYRHDGMALVPCSAGALGRIAAGV
                     SESLVSRAADVCLKERRPLVLCLRETPLNRVHLENMLRVHDAGAIVMPIMPGFYSGPE
                     TLDDLYDTFATRVLDQLGLREADPRRWRES"
     gene            complement(2916..>3135)
                     /locus_tag="VFV26_01215"
     CDS             complement(2916..>3135)
                     /locus_tag="VFV26_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844804.1"
                     /translation="IRYGKEELKLSGLVPKAMEAKLQHTAYAFRERLGQGAVILMAGD
                     PVFRGQTPFTRRVLFNAIFFGAYRPAPE"
BASE COUNT          457 a         1083 c         1094 g          501 t
ORIGIN      
        1 atggtgcgca ccctgaatac ccacctcaag gcgctcttcg ccaccaagta ggcggttttc
       61 catgatgcga cgtcttcttc cgggtctcct ggcctccgtc ctgctgctgg gcctggggtg
      121 caaggaaccc gatggcgcct ccggcggcac cacgggcgcc gccctgtacg cctatgacag
      181 cgccacgagt tccgtgttcg tgtggacgga cctggggacg ctgtacgatt ccaccaccac
      241 cacggtggcg ccctccaaga ccatcacgtc gtccgtcttc agcagcaaga tcaccagcct
      301 ggcctggggc ggcctttgct ttgaccggca gaacgggtat ctctacctgg tttcggatac
      361 cggcaacatc gtgcgcgtga gcaacatccg ctcgcagaac ggcctggtgg ccagtgccga
      421 tgtggtctcc ttcagcctgg ccagcgcggg ccgcctctcc agctcgacct tcgggcaggc
      481 gggcctcgac gtccagaccg gcaccctgta catcaccgaa agcggaagca gcggcacgca
      541 gatctgggcc gtgcccaatg ccagcaccca gatgcagagc gccacgatct ccctcacccc
      601 gctggccgtg aacggggata cgggcgggac cggcgtcgcc gccgactccg gatcggtcta
      661 cgccttcatg ctctcgggcg ataccgtggg aaccctgacg acctacaccg ggccccgcct
      721 ccgcaagggg acctcctcgg ggttcaccgg tgccagcacc atcatcgggg gatcgaccct
      781 cctcggccag tacggctcgc tcagcctcga caccgggaac ggctacctct tcgtggcccg
      841 ccacaacatc gatgcgggcg ccagcgccgc gcccatccag gtgttcacca ccggcatgtt
      901 cggccaggcc tacgaccagg cgccgatcgc caccctcggg agcgccgtgg accagccgga
      961 cctgcgggtc atcgcccatg ccggcacgaa ggactggctg gtgggcctgc ggggcgtcgg
     1021 cgccacgccg tacgccacga tccacctctg gaaatcgccc ctgggcggta cggcggcgaa
     1081 gaccatcacg gcctcgcccg ccacctccct gttcaagggg gtggccgtgg acgggaacgc
     1141 ttcgtgacgg ccctgcggct gctggggctg ctgttccagg acgtgctgcg ggacctctac
     1201 cggcaccggg gccagtacct gctggcggtg ctcaccctgg cctcgggcct gctgctggcg
     1261 ggcggcggcc tgctgctggt ggaaagcctg gaccgtttcg ccgggcgcct ggaggacatg
     1321 gcgaagatcg tggcctatgc cgcggacggg aagacgctcg atgaggccga ggcccgcctg
     1381 cggcgggacc cccgtttccg ggaagtgcgc cgcgtctcgg ccgaggagaa ccgccagcgc
     1441 ttccagtcct ccacccggga ggccgggctg ctgctggaga gcgcggggca ggacgccctg
     1501 cccgaaagcc tggaactgag cctccgccag gatctggccc aggggggcaa ggccctggaa
     1561 gtggcgggca gcctgcggac cctgcccggc attggcgatg tgctggcgga ccaggagcgg
     1621 ctggagcaga tccagcgcat ggcgcgcatg ctgcgctcgg ccctggccag cctgggtgtc
     1681 ctccttttgt tggccgcggg gttcgccacg gggaacgtga tccgcatgag catcctggcc
     1741 cgcgaggatg agatcggcat catgcgcctg gtgggggcct ccgaaagttt catccggact
     1801 cccctggtgc tggagggcgc cctgctgggt ttcgcgggga gcctgctggc catgctgggc
     1861 ctcttcggcc tctggctgcc ggtgtcacgg ggcctgggcg gcctgtcgcc cctgctggtg
     1921 gatctggcgc ggctgggctt cttctccgcc gccagcatgg cgctgctggc cttcgtcggc
     1981 gccaccaccg gggccctcgg cgccctgtgg gccttctgga ccacccgccg cgcccagcgg
     2041 gaagaggcgg cgctgatgga aggggcgggc tgagggatca ggctggagac ctgagaccgg
     2101 agtctggagt ctggaggtac tgcttccggt gcggccttcg gccggatggt ctttccgttt
     2161 gggccgtact gctcgaatgg gtcggttcca ccttagaaca acatcgaggc ccgtcagggc
     2221 ctcatcaaaa agcagtacct ccggtctcca gaccccagac tccagaccct agcctccagc
     2281 ctccggtctc cagactccag actccaggcc ctagcctcca gcctccggtc tccagcctta
     2341 agactcccgc caccgccgcg gatccgcctc ccgcagcccc agctgatcca gcacgcgggt
     2401 ggcgaaggtg tcgtagaggt catcgagggt ttccgggccg ctgtagaagc cgggcatgat
     2461 cggcatgacg atggcgccgg cgtcatggac gcggagcatg ttctccaggt ggacgcggtt
     2521 gaggggcgtc tcccgcaggc agagcaccag ggggcggcgt tccttcaggc acacgtcggc
     2581 ggcccggctc accagggatt cgctcacgcc tgcggcgatg cggcccaggg cgccggcgct
     2641 gcaggggacg agggccatgc cgtcgtggcg gtacgagccc gaggagatgt cggcgcccag
     2701 gtcgcgctcg tcgcgaaggg ccaccttggg cagggcggcc agatccttgg gggtgaggcc
     2761 ggtctcgtcc agcaggcagc gtttccccgt gggggagagc agcagggcga cctgctccac
     2821 cgagggattc gccgacaggc gtttcagggt ggccacgccg aaggccgagc ccgaggctcc
     2881 ggtgatggcg agggtgaagc gcaggcccat ggcggtcact ccggcgcggg ccggtaggcc
     2941 ccgaagaaga tggcgttgaa gagcacgcgg cgggtgaagg gcgtctggcc gcggaagacc
     3001 ggatcccccg ccatgaggat cacggccccc tggcccagcc gttcgcggaa ggcgtaggcc
     3061 gtgtgctgga gcttggcctc catggccttg ggcaccaggc ccgacagctt cagctcttcc
     3121 ttgccgtagc ggatg
//
LOCUS       DASUDT010000054         2892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_754027, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000054 DASUDT010000000
VERSION     DASUDT010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754027"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VFV26_01220"
     CDS             complement(<1..219)
                     /locus_tag="VFV26_01220"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX4844805.1"
                     /translation="MKRIAFFISGTGGNALNLLRACREGRVPGLPVLGLASSAKAGGI
                     SRLEAEGLSTVVVARPDFESDEAFSEACY"
     gene            complement(216..1220)
                     /gene="pta"
                     /locus_tag="VFV26_01225"
     CDS             complement(216..1220)
                     /gene="pta"
                     /locus_tag="VFV26_01225"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008959 - phosphate acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEX4844806.1"
                     /translation="MTHVNHTLWMERFRTRAKTLQRHIVLPEGREDRTLQAAAMLLEQ
                     GLCRLTILGDPAAMSARSVALGVSLKGAALVDPATSPLLGELAGAYFERRKAKGITEA
                     QALEAVHNPLWFGAMLVQNGHCDGLVAGALNTTAETVRACLQAIGAAKGIKTVSSFFM
                     MIHPDAAFGEQGAVLFADCAVVPDPTPEQLADIAIAAAENARSVMGVEPRVALLSFST
                     RGSAEHPCVDKVRAALAIIKERRPELAVDGELQADASLIPSVGQKKAPGSAVAGRANV
                     LVFPDLDAGNISYKIAERMGGCAAIGPFLQGLAKPANDLSRGCSAQDIADTVVLTALQ
                     "
     gene            complement(1217..1579)
                     /locus_tag="VFV26_01230"
     CDS             complement(1217..1579)
                     /locus_tag="VFV26_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844807.1"
                     /translation="MPLTMPFHAGDLVVVVLQSPRERLWGRILGLDAAGIALRGLDLT
                     PGEEVLTLVRTGQGDQVALGTRFLPMHRVETLYLDEPSSGAPSLADIFRDRTGQDPLA
                     FLADPPSSKPAFRPRSTP"
     gene            complement(1601..>2892)
                     /locus_tag="VFV26_01235"
     CDS             complement(1601..>2892)
                     /locus_tag="VFV26_01235"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4844808.1"
                     /translation="GSFEAWRGTSRLDRRRLMEAWLGQVALVREELARLITEETGKPI
                     TLALGEVGRAEATLRATADAVAGFGEEAIPYDLMAGAEGCRAVLRRFPVGPVLAITPF
                     NFPVNLAVHKLGPALAAGCSAIWKPCPQAPRTSHLLWESFEAARQQVAAPVRLLQLAS
                     ADPVAAEALAKDPRIAAVSFTGSERVGRHLERVLAGKRLLLELGGNGAVVLDEGVDAA
                     TVARQLAPAAVAGAGQSCSKAQRVYVHRNLWDAFAAAFVAAVKALPVGDPLDPATVVG
                     PLIDEATAQRMDEGLDRAVSAGAEVLMRGVRQGALLPPAVLAGLPEDDPFQCEEAFAP
                     ITVLTRVDSFEEGLDRAAATRFGLRASAYSRDQRHLRLAESRLQAGGVLLNLPPTFRL
                     DAAPFGGVRASGNGFEGPRWAMEGFTEGRLIVEGPAL"
BASE COUNT          425 a          995 c         1086 g          386 t
ORIGIN      
        1 gtagcaggcc tcggaaaagg cttcgtccga ttcgaaatcc ggccgtgcca ccaccaccgt
       61 ggaaagcccc tccgcctcca accgggagat gcccccggcc ttggcggagg aggccaatcc
      121 cagcacggga aggcccggca cccggccctc gcggcaggcc ctgagcaggt tcagggcatt
      181 gccgccggtg ccggagatga agaaggcgat gcgcttcact ggagggccgt gagcaccacc
      241 gtgtcggcga tgtcctgggc gctgcagcca cggctcaggt cgttggcggg cttggccagg
      301 ccctggagga agggcccgat ggcggcgcag ccgcccatgc gctcggcgat cttgtacgag
      361 atgttgccgg cgtcgagatc cgggaacacc agcacgttgg cccggcccgc cacggcggag
      421 cccggcgcct tcttctggcc cacggagggg atcagggacg cgtcagcctg cagctcgccg
      481 tccacggcca gctccggccg gcgctccttg atgatggcga gggccgcgcg gaccttgtcc
      541 acgcaggggt gctcggcgga gccgcgggtg gagaagctga gcagggccac ccggggctcc
      601 acgcccatga cgctgcgggc gttctcggcg gcggcgatgg cgatgtccgc cagctgctcg
      661 ggcgtgggat ccggcaccac ggcgcagtcc gcgaagagca cggccccctg ctcgccgaag
      721 gcggcatcgg ggtggatcat catgaagaag ctggacacgg tcttgatgcc cttggcggcg
      781 ccgatggcct ggaggcaggc gcgcacggtc tcggcggtgg tgttcagggc cccggccacc
      841 aggccgtcgc agtggccgtt ctgcaccagc atggcgccga accacagggg gttgtggacg
      901 gcctccaggg cctgggcctc ggtgatgccc ttggccttgc gccgctcaaa gtaggccccg
      961 gccagttccc ccagcagggg actggtggcg ggatccacca gggccgcgcc cttcagggag
     1021 acgccgaggg cgacgctccg ggccgacatg gcggcgggat cgcccaggat cgtgaggcgg
     1081 cagaggccct gttcgagcag catggccgcg gcctggaggg tgcggtcctc ccggccctcg
     1141 ggcagcacga tgtggcgctg cagcgtcttg gcgcgggttc ggaagcgctc catccaaagg
     1201 gtgtggttga cgtgggtcat ggggtactcc ggggacggaa cgcgggtttg gatgaggggg
     1261 gatcggcgag gaaggcgagg ggatcctggc ccgtgcggtc gcggaagata tcggcgaggc
     1321 tcggggcccc ggaactgggt tcatcgaggt acagcgtctc cacccggtgc atgggcagga
     1381 agcgggtgcc cagggccacc tggtcgccct ggcccgtgcg caccagggtc agcacctcct
     1441 ccccgggagt gagatcaaga ccgcggaggg cgatgccggc ggcgtccagc cccaggatcc
     1501 gcccccacag gcgctcccgc ggcgactgga gcaccaccac cacgaggtcg ccggcatgga
     1561 agggcatggt caggggcatg ggtcggctcc aatccgattc ttacagggcc gggccttcga
     1621 cgatgaggcg gccttcggtg aagccctcca tggcccaccg gggcccctcg aagccgttgc
     1681 cactggcccg cacgccgccg aagggggccg cgtccagacg gaaggtgggc gggaggttca
     1741 gcagcacacc gccggcctgc aggcgcgatt ccgccaggcg caggtggcgt tggtcccggc
     1801 tgtaggcgct ggcccgcagc ccgaaccgcg tggcggcggc ccggtcgagg ccctcttcga
     1861 aggaatccac ccgcgtcagc acggtgatgg gggcgaaggc ctcctcgcac tggaagggat
     1921 catcctcggg cagtcccgcg agaaccgccg gcggcaggag ggcgccctgg cggactccgc
     1981 gcatcagcac ctcggcgcca gccgagaccg cgcggtcgag gccttcgtcc atgcgctggg
     2041 ccgtggcctc atcaatgagg ggccctacca cggtggcggg atccagggga tcgcccaccg
     2101 gcagggcttt cacggcggcg acaaaggccg cagcaaaggc gtcccacagg ttccggtgca
     2161 cgtagacccg ctgggccttg gagcagctct gccccgcccc ggccacggcg gcgggagcga
     2221 gctggcgggc cacggtagcc gcatccacgc cctcgtccag caccacggcg ccgttcccgc
     2281 ccaactccag caggagccgc ttgcccgcca gcactcgctc caggtggcgg cccacgcgtt
     2341 cagagccggt gaaactcacg gcggcgatgc gggggtcctt cgccagggcc tcggcggcga
     2401 cggggtctgc ggaggccagc tggagcaggc gcacgggtgc cgccacctgc tgccgggccg
     2461 cctcgaagct ttcccagagc aggtgggagg tccggggcgc ctggggacag ggtttccaga
     2521 tggcgctgca gcccgcggca agggcgggac cgagtttatg caccgccagg ttcacgggga
     2581 agttgaaggg cgtgatggcc aggacgggcc ccacggggaa gcgccgcagc accgcccggc
     2641 agccttcggc tccggccatc aggtcgtagg ggatggcctc ctccccgaat ccggccacgg
     2701 cgtcggccgt ggcccgcagg gtggcttcgg cgcggcccac ttcccccagc gccagtgtga
     2761 tgggcttgcc ggtctcttcg gtgatgaggc gtgccagttc ctcccggacc agggccacct
     2821 ggcccagcca ggcctccatg agcctgcgcc ggtccagccg ggaggtcccg cgccaggcct
     2881 cgaaggatcc ca
//
LOCUS       DASUDT010000055         2990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_290062, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000055 DASUDT010000000
VERSION     DASUDT010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290062"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..146)
                     /locus_tag="VFV26_01240"
     tRNA            complement(72..146)
                     /locus_tag="VFV26_01240"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(112..114),aa:Gly,seq:gcc)
     gene            complement(249..641)
                     /locus_tag="VFV26_01245"
     CDS             complement(249..641)
                     /locus_tag="VFV26_01245"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEX4844809.1"
                     /translation="MRQTPQREGILRVLKNSDRPLTVEEIWERMPERRSGLPTVYRNL
                     ERFVREGWAESIMGPDQVMRFVRCDSRHHHHHLQCDRCGRTAEVDACGLDESLAGLEK
                     LSGFRITRHQLMLFGLCPACRMETAAGA"
     gene            714..2393
                     /locus_tag="VFV26_01250"
     CDS             714..2393
                     /locus_tag="VFV26_01250"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4844810.1"
                     /translation="MLDPMLQRTLDILGTRDASPPFLPLAFRFFASFGLLVLHLALPA
                     EGRASGPGENLYLAVMALLLAEAAWESGLGLRRRNQLFPTPSLPWIRWNLALDLALVT
                     LVIAYQGVGQERFSTLYIFPVLASAFYLGTAEIVWVGVGSSLTHILLVLGFTAGLLPP
                     FGLSGEGLDLDGARLAYLLGIASLQVFGTTLVVVLIRRNLERLSTDLSASEATVDELS
                     ALHRRVVDSMSSGLVTLDREGRITSANPAAQSILGCPVPLGAPIQAILPLGDPLPAQR
                     GREHRFELILPGEDRTRRILGGHLASLRGAGGQETGQLLLFQDLTELKALEERTRISE
                     RLAAIGQLAAGLAHELRNPLASISGCVQLLHRREAPEEVQARVLGILDRETQRVGAIV
                     SDFLDFARPEPPPGAVLSLPRVLEEARASWEMDPRTGGLPLASREAPPVFLRADSVGL
                     HRVLMNLLSNARKAVKDVPVPQVSLSASASGGRILLAVEDNGCGMSPEQLTRLFVPFS
                     GSFEEGSGLGMSLVYKFTEAMGWRIEVQSRPGDGTRVQIFLPECPLEEGLA"
     gene            2607..>2990
                     /locus_tag="VFV26_01255"
     CDS             2607..>2990
                     /locus_tag="VFV26_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0010467 - gene expression [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LSm family protein"
                     /protein_id="HEX4844811.1"
                     /translation="MNRKLIRPNLTELKDKLGIPAKGGGGETMTAIPSAVTAAGEPNP
                     AVNPAAATAPQGLGSPRRKIAPPEQTNAESFYYLKQMQSKTPMVIVLQDDEKVRGVIE
                     WYDKHCLKINRVKEPNVLVPKHNIKY"
BASE COUNT          466 a         1046 c          965 g          513 t
ORIGIN      
        1 tggctacggc gccttgcgtt ggtgcgatgg agctgtcaaa cgatccgggc cgcttgcgcg
       61 gcccgggaag gtggagcggg tgatgggatt tgaacccacg acttcaacct tggcaaggtt
      121 gcactctacc actgagttac acccgcgtga gacatcaaga ctagcaatgg cgcgaggttc
      181 ggtcaacggt ctttttcacg acccacctcc tgtgggtcgc cctccgggcc cgccttcggc
      241 gggtgtccct acgctcccgc tgcggtctcc atccggcagg ccggacagag gccgaagagc
      301 atgagctgat gccgcgtgat gcggaagccc gagagcttct cgagcccggc cagcgattca
      361 tccagcccgc aggcatccac ctctgcggtg cgcccgcagc ggtcgcactg gaggtggtgg
      421 tggtggtggc gcgaatcgca gcggacaaac cgcatgacct ggtcggggcc catgatgctc
      481 tcggcccaac cctctcgcac gaagcgctcg aggttgcggt acaccgtcgg caggcccgac
      541 cgtcgttccg gcatgcgctc ccagatctcc tccaccgtga gcggccggtc cgagttcttg
      601 agcacccgga gaatcccttc gcgctgcgga gtctgccgca tgccggcggc acggagagaa
      661 ggcgaagagg cggaagcagg gtcaggcatg gccctagaat gccagattcg ggcatgctgg
      721 atcccatgct ccagcgcaca ttggacattc tggggacaag ggacgccagt cccccgttcc
      781 tgcccctggc ctttcggttc ttcgccagct tcggcttgct ggtgctgcac ctggcccttc
      841 ctgccgaagg ccgggcctca gggccgggcg agaacctgta cctcgcagtg atggccttgc
      901 tgctggccga ggcggcctgg gaaagcggcc tcggcctgcg gcgccggaac cagctcttcc
      961 ccacgccatc cctgccctgg atccgctgga acctggccct ggacctggcc ctggtcacgc
     1021 tggtgatcgc ctatcagggc gtgggccagg agcggttctc caccctctac atcttccccg
     1081 tgctggcctc ggccttctac ctcgggaccg cagagattgt gtgggtgggc gtcggctcat
     1141 cgctgacgca catcctgctc gtgctcggct tcactgcggg gctgctgccg cccttcggcc
     1201 tttccggcga gggcctggat ctcgacgggg cccgcctggc ctacctgctg ggcatcgcct
     1261 cactgcaggt attcggcaca accctcgtcg tggtgctgat ccgcaggaac ctggagcggc
     1321 tgagcacgga tctgagcgcc agcgaagcca ccgtggacga gctttcggcc ctgcaccgcc
     1381 gcgtggtgga ttccatgtcc tcgggcctcg tcaccctgga ccgggagggg cggatcacct
     1441 ccgcgaaccc ggccgcgcag agcatccttg gttgtcccgt gcccctgggc gccccgatcc
     1501 aggccatcct gcccctcggc gaccccctcc cggcgcagcg ggggcgggag caccgcttcg
     1561 agctcatcct ccctggggaa gaccggaccc gccggatcct gggcgggcac ctggcctctc
     1621 tccgaggggc ggggggccag gaaacgggac agctgctgct cttccaggat ctgaccgagc
     1681 tcaaggccct ggaggagcgg acgcggatca gtgaacggct ggcggccatc ggtcagctgg
     1741 cggcgggcct cgcccacgag cttcgcaacc cgctggcgtc catcagcggc tgcgtccagc
     1801 tgctccaccg ccgcgaggcc cccgaagaag tgcaggcgcg ggtgctgggc atcctggacc
     1861 gggagaccca gcgcgtgggg gccatcgtgt ccgacttcct cgatttcgcc cgccccgagc
     1921 ccccgccggg cgccgtgctt tccctgcccc gcgtccttga ggaggcccgc gccagctggg
     1981 agatggaccc ccggaccgga ggcctgcccc tggcctcgcg ggaggcccct ccggtcttcc
     2041 tccgtgcgga ttcggtgggc ctgcaccggg ttctgatgaa cctcctcagc aatgcccgca
     2101 aggccgtgaa ggatgttccc gtcccgcagg tcagcctttc ggccagtgcc tccggcggcc
     2161 ggatcctgct ggctgtggag gacaacggct gtggcatgtc ccccgaacag ctgacccggc
     2221 tgttcgtgcc cttttccggc agcttcgagg aggggtcggg gctcggcatg agcctggttt
     2281 acaagttcac cgaggccatg gggtggcgga tcgaggtcca gagccgaccg ggggacggca
     2341 cccgcgtcca gattttccta cccgagtgtc cgttggaaga gggattggcg taaccgggcg
     2401 acagggccta gactttcatc agctttccgt catctaagtc tggacacacc cttgcagggt
     2461 ccacttggca cctgccaaag tggttcattc ccttccatcg ccctcaggtc ccgcccccgg
     2521 gcaggccttg tccaggcttg agggggaacg gccacccgcc gatgcctttg acattccccg
     2581 caccgccccc tgggccagga cctgccatga atcgcaagct catccgaccg aatctcactg
     2641 aactcaagga taaattgggc attcccgcca aggggggcgg cggcgaaacc atgaccgcca
     2701 ttccctcggc cgtgaccgcc gctggcgagc cgaatccggc ggtcaaccct gccgccgcca
     2761 cggcgcccca gggtctgggc agtccccgcc gcaagatcgc gccgcccgaa cagaccaacg
     2821 ccgagagttt ctactacctc aagcagatgc agtccaagac gcccatggtg atcgtgctcc
     2881 aggacgacga aaaggtgcgc ggcgtcatcg agtggtacga caagcactgc ctgaagatca
     2941 accgggtgaa agaacccaac gtcctcgtgc ccaagcacaa catcaagtac
//
LOCUS       DASUDT010000056         2071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1085483, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000056 DASUDT010000000
VERSION     DASUDT010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085483"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VFV26_01260"
     CDS             complement(<1..646)
                     /locus_tag="VFV26_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844812.1"
                     /translation="MTEQEGRGFLLRAATDGPWAGWTGSRFLEEGLASVHAAPGRALA
                     RLMNLAALLPGGFGLVWDHPPAWMEALPAESRQGWWEAISAIPGLSLHLGPEAALQLP
                     GGAFRAWLHAPEMPEGPLGEAWRQGTVGWVPRSGAAWRLPALGTPAAGDEVPPGWLWG
                     EVALPLGALSTLASGDALIAAMSEAQGAAERGLAQRLAAGAWVDLPFLRRSAGWR"
     gene            complement(643..1476)
                     /locus_tag="VFV26_01265"
     CDS             complement(643..1476)
                     /locus_tag="VFV26_01265"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX4844813.1"
                     /translation="MDATRPSAPPVALCLGGMDPSAGAGLLRDALALAELGCQPMAVS
                     LAETLQNGLACARIEAPGLDPVQRLETLAPHLIGRWGVKLSLCALAETDFRRLCATLR
                     HLAPPVRIWDPILAPSAGVGLHDGGDLRRMGADLLSMGGWIVSPNRGEAAAFAGLPPE
                     AIRMATPEALAAPWLEAGAQAVWLKGGHAAGDQVQDLWITRGGIEALDATPRLPGERR
                     GTGCLLSAGWLGLRLQGLEARAAARESARRLRDRWHQAFAPGGAGRPMFAPLPPPGEA
                     Q"
     gene            complement(1521..1829)
                     /locus_tag="VFV26_01270"
     CDS             complement(1521..1829)
                     /locus_tag="VFV26_01270"
                     /inference="COORDINATES: protein motif:HMM:NF013236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HEX4844814.1"
                     /translation="MAIKRGDRLENDRVLSFEQVVAEVMPFIDTPLLLEIQLGQTRMT
                     IRDLLELEPGSLVELKKSAGEPMDVLCKERILIRGEVTVLEDSLGLRVTEIMNSDRKV
                     "
BASE COUNT          285 a          724 c          790 g          272 t
ORIGIN      
        1 ggcgccagcc cgccgaccgg cgcaggaagg gcagatccac ccaggcgccc gccgccaggc
       61 gctgggccag gccccgttcg gcggcgccct gggcctcgga catggcggcg atcagggcat
      121 cgcccgaggc cagggtgctg agggcgccga ggggcagggc cacctcgccc cagagccatc
      181 ccgggggcac ttcatcgccc gcggcgggcg tgcccagggc cggcaggcgc caggctgcac
      241 cggagcgggg aacccagccg acggtcccct ggcgccaggc ctcgcccagg gggccctccg
      301 gcatctcggg ggcgtggagc caggcccgga aggcgccgcc gggaagctgc agggccgcct
      361 ccggacccag gtggaggctg aggcccggaa tggcggaaat ggcctcccac cagccctgcc
      421 gggattcggc gggcagggcc tccatccagg ccgggggatg gtcccagacc aggccgaagc
      481 cgccggggag cagggccgcc aggttcatga gccgggccag ggcgcggccc ggggcggcgt
      541 ggaccgaggc cagcccttct tcgaggaacc gcgaccccgt ccagcccgcc caggggccgt
      601 ccgtggcggc gcgcagcagg aatccccggc cctcctgttc cgtcactggg cctccccggg
      661 gggcgggagg ggcgcgaaca tggggcggcc cgcgccgcct ggggcgaagg cctggtgcca
      721 gcggtcgcgc aggcggcggg ctgattcccg ggccgcggcg cgcgcctcga ggccttgaag
      781 gcggaggccc agccagccgg cggaaagcag gcagcccgtg cccctgcgct cgcccggcag
      841 gcggggcgtg gcgtcgaggg cttcgatacc cccccgggtg atccagagat cctgcacctg
      901 gtccccggcg gcatggccgc ccttgagcca gacggcctgg gctccggcct caagccaggg
      961 ggcggccagg gcctccgggg tcgccatgcg gatggcctcc ggcggcagac cggcgaaggc
     1021 ggccgcttcg ccgcggttgg ggctcacgat ccagccgccc atggacagca ggtcggcgcc
     1081 catgcggcgc agatcgccgc cgtcgtggag gcccacgccg gcgctggggg ccaggatggg
     1141 atcccatatg cggaccggcg gggccaggtg gcgcagggtg gcgcagagcc gccggaaatc
     1201 cgtctccgcc agggcgcaga ggctgagctt cacgccccag cggccgatca ggtggggggc
     1261 tagggtttcc agtcgctgga ccggatccag gccaggtgct tcgatgcggg cgcaggccag
     1321 gccgttctgg agggtctccg ccaggctcac ggccatgggc tggcaaccca gttccgccag
     1381 ggccagggca tcccgcagaa ggccggcccc ggcggacggg tccatcccgc ccaggcagag
     1441 ggcgaccggc ggggcgctgg gtcgggtggc atccatggcg aagtcccagg atgacacagg
     1501 atggagggct ggacggaggc ctacaccttg cggtcggagt tcatgatctc cgtgacccgc
     1561 aggccgaggc tatcctccag caccgtgacc tcgccgcgga tgaggatgcg ttccttgcag
     1621 aggacatcca tgggttcgcc ggcgctcttc ttgagctcca cgagggagcc cggctccagt
     1681 tccaggaggt cgcggatggt catgcgggtc tgccccagct ggatctcgag cagcagcggc
     1741 gtatcgatga agggcatgac ctccgccacg acctgctcga aactgagcac gcggtcgttt
     1801 tcgagccggt ccccccgctt gatggccatg tccctcccaa cggtcctgtc aaagcatgga
     1861 cccgcgcctc cggcaccgca acgggcgtgc catcaggcgg ggccggtcac tgctggatgg
     1921 cccagtccac gatgagcacg ctcttgatgg gccgcttcgg cttcttgtgc ttgggatcct
     1981 ccttttcgcc gggtttggga ggatggggct tgaactgctc gttgagcttg tatttgatct
     2041 cctggcgcag agcctcgcgg gattcggcgt c
//
LOCUS       DASUDT010000057         3367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_665584, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000057 DASUDT010000000
VERSION     DASUDT010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665584"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VFV26_01275"
     CDS             <1..361
                     /locus_tag="VFV26_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844815.1"
                     /translation="LWEWIHKGARLTEADAETGCAAGDAFTPALFARLLEEEYAKLRR
                     AGNRDVHDDSKDTTLPIARAIVQTYVQSGIKAPWYVDLLNLNLGVESLPEAERRIARF
                     LEAFQKDGTRMTDNLDF"
     gene            417..>3367
                     /locus_tag="VFV26_01280"
     CDS             417..>3367
                     /locus_tag="VFV26_01280"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4844816.1"
                     /translation="MGLFPVFLTACLLLPGAGAASSLQAAPAPKAAKKPLSYDAYDGW
                     RSIRDASLSRDGAWLVYALVPQDGDGEVVARNLKTGQEWRHPRGQNPVVSADGRFVAF
                     GIAPARAERDKARKAKKKPEDMPKAGLGVMDLGTGKVETLERVKSFRLAKDGGPFLAA
                     LLEKAEDRKPEEKTLEGKADDADQRARPGAAPAEGKDGKKKEPGTDLILWELGTAARI
                     KVPEVAEFIWNRDGSWLAYAVSVKEAPKPAEKATGKAGTEAPKAPVEAPKSEPEDAAR
                     EGVYLWRAADRGTLPLLTGAGAYKGLAADEQGLQLAFLSNRDAAKAEAPAFKLYGWRA
                     GETGAQELAAAQSPGMPAGWCPSEHGPLTFSKDGARLFLGTAPAPRAEPKDAPEPLKV
                     DLWHWKDAEVQPMQKVRSEEEKKRSFRAVVHLSGRRFRQLGSEAMPEVETNDNPTVAL
                     GYAPQAYLHLASWDQAYADVFAIDLDTGASRLLAKKLPWSPRSAGGPVRGARLSPAGK
                     YFFHFDEPERAWMLIPTAGGPALNLTRDLKTAFQNERHDMPGEANAYGAAGWTADDAA
                     LLAYDRYDLWELKPGGARNLTAGQGRAQRIALRVLRLDPEEQILATDKPLVLSGMDEE
                     TKATGFFRAGWDGAAPLRLIWGQERMDGLQKAKDSDRVVFTRQRFDVFPDLWASDLAF
                     AKPVKVTAANPQQAGYLWGTQELISYVNADGKVLQALVAKPENFDPKKQYPLMVYIYE
                     RYSDSLHNHQAPAPGTSINFTRYVSQGYVVLRPDIEYETGYPGKSAMKCVLPAIDKLV
                     EAGYIDRERIGIQGHSWGGYQIAYMVGQTRLFKAAEAGAPVSNMTSAYGGIRWGTGML
                     RAFQYEKTQSRIGAAPWERPLQFIENSPLFWVERVQTPLLMIHNDDDDAVPWYQGIEY
                     YAALRRLDKPVWMFNFNGDKHNLVQRENQKYWTVHMDEFFDHLLLGRPRPGWMDRPVP
                     YQERGRRDMAP"
BASE COUNT          576 a         1148 c         1189 g          454 t
ORIGIN      
        1 cctgtgggag tggatccaca agggggcccg gctcaccgaa gccgatgcgg agaccggctg
       61 cgccgctggg gacgccttca cgccggccct cttcgcgcgc ctgctggagg aggagtacgc
      121 caagctccgc agggccggca accgcgatgt ccacgacgac tccaaggaca ccaccctgcc
      181 catcgcccgg gccatcgtcc agacctacgt ccagagcggg atcaaggccc cctggtacgt
      241 ggacctgctg aacctcaacc tgggcgtgga gagcctgccc gaggcggagc ggcgcatcgc
      301 gcggttcctg gaggccttcc agaaggacgg cacgcggatg accgataacc tggatttctg
      361 aacgcttgat gggcaaccct ctccgcctcc tggcggggac cacgatgcga ggcaccatgg
      421 gcctttttcc tgttttcctc accgcatgcc tgctcctgcc gggcgccggg gcggcctcca
      481 gcctccaggc cgctccggcc cccaaggccg cgaagaaacc cctttcctac gatgcctatg
      541 acggctggcg gagcatccgg gacgcctcgc tgtcccgcga tggcgcctgg ctcgtgtacg
      601 ccctggtgcc ccaggatggc gatggcgagg tggtggcccg gaacctgaag acgggccagg
      661 agtggcgcca tccccgggga cagaatcccg tggtgtccgc cgatggccgc ttcgtggcct
      721 tcggcatcgc gcccgcccgg gcggagcggg acaaggcccg gaaggcgaag aagaagcccg
      781 aggacatgcc caaggccggc ctgggcgtca tggacctggg cacggggaag gtggagaccc
      841 tcgagcgcgt gaagagcttc cgcctggcca aggacggcgg gcccttcctc gcggccctgc
      901 tggagaaggc cgaggaccgg aagccggagg agaagacgct ggaggggaag gctgacgatg
      961 ccgatcagcg cgcgcgtcct ggcgccgctc ccgcggaggg gaaggacggc aagaagaagg
     1021 aaccgggcac ggacctgatc ctgtgggaac tggggacggc ggcccggatc aaggtgcccg
     1081 aggtcgcgga gttcatctgg aaccgcgatg gctcctggct ggcctatgcg gtgtccgtga
     1141 aggaggcgcc gaagccggcc gaaaaggcga cggggaaggc cggcacggaa gcgcccaagg
     1201 cccctgtgga agctcccaag tcggagccgg aggatgcggc ccgggaaggc gtctacctct
     1261 ggcgcgcggc ggatcgcggc accctgccgc tgctgacggg ggcgggcgcc tacaaggggc
     1321 tggccgcgga cgagcagggc ctgcagctgg ccttcctcag caaccgggat gcggccaagg
     1381 ccgaggcgcc cgccttcaag ctctacggat ggcgggccgg tgaaaccggg gcgcaggagc
     1441 tggccgcggc ccagagtccc ggcatgcccg cgggctggtg tccctctgag catgggcccc
     1501 tgacgttctc gaaggatggc gcccggctgt tcctgggcac ggccccggca cccagggccg
     1561 agcccaagga tgcgccggaa cccctgaagg tggacctctg gcactggaag gatgccgagg
     1621 tgcagcccat gcagaaggtg cgctccgagg aggagaagaa gcgcagcttc cgcgcggtgg
     1681 tgcacctctc gggccgccgg ttccgccagc tgggctcgga ggccatgccg gaggtggaga
     1741 ccaacgacaa ccccacggtg gcgctgggct acgcgcccca ggcctacctc cacctggcct
     1801 cctgggacca ggcctatgcg gatgtcttcg ccatcgacct ggacaccggc gccagcaggc
     1861 tgctggcgaa gaagctgccc tggtcgcccc gcagtgccgg tggcccggtc cggggggcgc
     1921 gcctgtctcc ggcggggaag tacttcttcc atttcgacga gccggaacgg gcctggatgc
     1981 tgatccccac cgcgggaggg ccggccctga acctcacccg ggatctgaag accgccttcc
     2041 agaacgagcg ccacgacatg cccggggagg ccaacgccta tggggccgcg ggctggaccg
     2101 ccgatgatgc ggccctcctg gcctatgacc ggtacgacct ctgggagctg aagcccgggg
     2161 gtgcccgcaa cctcaccgcc ggccagggcc gcgcccagcg catcgccctg cgggtcctcc
     2221 gcctggatcc ggaggaacag atcctggcca cggacaagcc cctcgtgctc tccgggatgg
     2281 acgaggagac caaggccaca ggcttcttcc gcgccggctg ggacggcgcc gcgcccctgc
     2341 ggctgatctg gggccaggag cgcatggatg gcctccagaa ggccaaggat tcggaccggg
     2401 tggtcttcac ccggcagcgc ttcgatgtgt tcccggatct ctgggccagc gacctggcct
     2461 tcgccaagcc ggtgaaggtg accgcagcca atccccagca ggccgggtac ctctggggca
     2521 cccaggagct gatctcctac gtgaacgccg acggaaaggt gctccaggcc ctggtggcca
     2581 agcccgagaa cttcgatccg aagaagcagt acccgctcat ggtctacatc tacgagcggt
     2641 acagcgacag cctgcacaac caccaggccc ccgctcccgg caccagcatc aacttcacgc
     2701 ggtacgtcag ccagggctac gtggtgctgc ggccggacat cgaatacgag accggctatc
     2761 ccgggaagag cgccatgaag tgcgtcctgc ccgccatcga caagctggtg gaggccgggt
     2821 acatcgaccg cgagcgcatc ggcatccagg ggcacagctg gggcgggtac cagatcgcgt
     2881 acatggtggg gcagacgcgc ctcttcaagg cggcggaggc cggggcgccg gtgtccaaca
     2941 tgaccagcgc ctacggcggc atccgctggg gcacgggcat gctccgggcc ttccagtacg
     3001 agaagaccca gagccgcatc ggcgccgcgc cctgggagcg cccgctgcag ttcatcgaga
     3061 actcgccgct gttctgggtg gagcgggtcc agacaccgct gctgatgatc cacaacgacg
     3121 acgacgatgc cgtgccctgg taccagggca tcgagtacta cgccgccctc cgccgcctgg
     3181 acaagccggt ctggatgttc aatttcaacg gcgacaagca caacctcgtg cagcgggaga
     3241 accagaagta ctggacggtc cacatggacg agttcttcga ccacctgctg ctggggcggc
     3301 cccggcccgg gtggatggac cgccccgtgc cctaccagga gcggggccgg cgggacatgg
     3361 cgcccat
//
LOCUS       DASUDT010000058         3027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2079760, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000058 DASUDT010000000
VERSION     DASUDT010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2079760"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFV26_01285"
     CDS             complement(<1..767)
                     /locus_tag="VFV26_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX4844817.1"
                     /translation="MESIGSPWMWGGFIAFVLAMLALDLGVFHRQAHKVSVREAAVWS
                     VVWVGLALAFNAILWKAFGPQRGMEFLTGYLIEKALSVDNIFVFVLIFGAFSVPEAYQ
                     HRVLFWGILGALVMRAIFVGLGAALIASFHWVLYLFGAFLVITGIKMLVMRDHGFDPR
                     SNPAFRLFQRLVPSVDTYHGPAFSVVKDGRRFATPLLLVLVAVELTDLVFAVDSVPAI
                     FAVTKDPFIVFTSNIFANLGLRSLYFLLAGVVDRFHLL"
     gene            complement(813..1115)
                     /locus_tag="VFV26_01290"
     CDS             complement(813..1115)
                     /locus_tag="VFV26_01290"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX4844818.1"
                     /translation="MNIQIRGIGIQGTEAIAAHVERRLAFALSRFSSHLDRILVRFSD
                     LNGPKGGPDKVCQLDVQVRGAGTATVEARDGDLYAAVDLAAAKAGRRVARLLDRRR"
     gene            1213..2112
                     /gene="nhaR"
                     /locus_tag="VFV26_01295"
     CDS             1213..2112
                     /gene="nhaR"
                     /locus_tag="VFV26_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HEX4844819.1"
                     /translation="MDWLNYHHLFYFWTTAREGGVTRAAERLRLAQPTLSAQIRALEA
                     SFGVKLFEKQGRGLALTEAGRTAFRYAEGIFGLGQELRESLAGVAQGRAPVLTVGISD
                     ALPKLMVQRLLEPALHLPEPIRLVCLEDRTDRLLAKLSLHELDLVLSDGPPPPNNPVR
                     AFSHLLGECGVQVFGTGALRRAHSGPFPGCLDGAPFLLPPEGTALRRGLDQWFELGKL
                     RPRIAGEFDDSALLKTFGQRGHGFFAAPAPLAREVERQYQVRRMGVAEGVRERVVVLT
                     LDRRLRHPAVVAISEAAKAKVFA"
     gene            2158..>3027
                     /locus_tag="VFV26_01300"
     CDS             2158..>3027
                     /locus_tag="VFV26_01300"
                     /inference="COORDINATES: protein motif:HMM:NF013254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844820.1"
                     /translation="MKILLLGSGGREYALALKLKASAVPVDLVSAPGSDALAELGACA
                     ALDLEAPAAVAAWCAANHPDLVVAGPEVPLVAGVADAVRMLGIPVFGHDAATARLEGS
                     KAAAKAFMERHHIPCAASHTVTDLAEGEALIRGWTYGYPIVLKADGLAAGKGVVLAES
                     EAEALATFRAFMAGQFGDASRTVVFEAPLVGMELSLHVLVDVDADHAAFAMLPACQDH
                     KRIFEGDRGPNTGGMGAFGPIPFLRPGDIERMRTALVEPTVRGLQTDGLAARGVLFLG
                     VMWTASGPKLLEYN"
BASE COUNT          504 a          998 c         1074 g          451 t
ORIGIN      
        1 agcaggtgga aacggtccac cacgccagcc agcaggaagt agaggctgcg caggccgagg
       61 ttggcgaaga tgttggacgt gaagacgatg aacggatcct tggtgacggc gaagatggcc
      121 ggcacggaat ccacggcgaa cacaaggtct gtcagctcca ccgccaccag caccagcagg
      181 aggggcgtgg cgaagcggcg gccatccttc accacggaga aggcggggcc atggtaggtg
      241 tccacggacg ggaccagccg ctggaacagt cggaacgcgg gattgctcct gggatcgaaa
      301 ccgtggtccc gcatcaccag catcttgatg cccgtgatca ccaggaaggc gccgaagagg
      361 tagagcaccc agtggaagct ggcgatgagg gccgcgccca ggcccacgaa gatggcccgc
      421 atgaccaggg cccccaggat gccccagaag agcacccggt gctggtaggc ctccggcacg
      481 gagaaggcgc cgaagatcag cacgaacacg aagatgttgt ccacgctgag ggccttctcg
      541 atgaggtagc ccgtgaggaa ctccatgccg cgctggggac cgaaggcctt ccagaggatc
      601 gcgttgaagg cgagggccag acccacccag accacgctcc agacggccgc ttcccggacg
      661 ctgaccttgt gggcctggcg gtggaacacg ccgaggtcca gggccagcat ggccagcacg
      721 aatgcgatga aaccgcccca catccagggg gaaccgatgc tttccaaggg gaactcctta
      781 agaatgaatg acggaaggtc ctgctgccgg gatcagcgac ggcgatccag caatcgggcc
      841 acccggcggc ccgccttggc cgcggccaga tcgacggcgg cgtagaggtc cccgtcccgg
      901 gcctccacgg tggccgtccc cgccccccga acctggacgt ccagctggca gaccttgtcg
      961 gggcccccct tgggtccatt cagatcgctg aagcggacca ggatgcggtc caggtggctg
     1021 gagaagcgcg aaagcgcgaa ggccagccgc cgctccacat gggcggcgat ggcctcggtg
     1081 ccctggatgc cgatgccgcg gatctggatg ttcatgctgc ctccggatcc ccagtctcga
     1141 tcccggaaaa acatctaaca aatagataaa aaaattaaaa caataggtat tttaaatgta
     1201 ttggaggtcc tgttggactg gctgaactac caccatctct tctatttctg gaccacggcc
     1261 cgggagggcg gggtcacccg ggcggcggaa cgcctccgcc tggcccagcc gacgctgagc
     1321 gcccagatcc gggcgctgga ggcctccttc ggcgtgaagc tcttcgagaa gcagggccgg
     1381 gggctggcgc tgacggaggc cggacggacg gccttccgct acgcggaggg gatcttcggc
     1441 ctcggacagg agctgcggga atccctggcg ggcgttgccc agggacgggc ccccgtcctg
     1501 accgtgggca tctccgacgc cctgccgaag ctcatggtgc agcgcctgct ggagcccgcg
     1561 ctgcacctcc cggagcccat ccggctggtc tgcctcgagg accggacgga ccgcctgctg
     1621 gccaagctct cgctgcacga actggacctg gtcctttccg atgggccgcc cccgccgaac
     1681 aatccggtcc gcgccttcag ccacctcctg ggcgagtgcg gcgtgcaggt gttcggcacc
     1741 ggggccctcc ggcgggccca ttccgggccc tttcccgggt gcctggacgg ggctcccttc
     1801 ctgcttccgc cggaagggac ggccctccgg cgggggctcg accagtggtt cgagctgggg
     1861 aagctccggc cccgcatcgc gggggagttc gacgacagcg ccctgctcaa gaccttcgga
     1921 cagcggggac acggcttctt tgcggccccg gcccccctgg cccgggaggt ggagcgccag
     1981 taccaggtcc ggaggatggg cgtggccgag ggcgtgcggg aacgggtggt cgttctcacg
     2041 ctggaccggc gcctgcggca ccccgcagtc gtggccatct ccgaggcggc gaaggccaag
     2101 gtctttgcct gacccgcccc ccggggggct gggcgatact gggaagcgga ggctcccatg
     2161 aagatcctgc tcctcggctc aggcggccgg gaatacgcgc tggcgctgaa gctcaaggct
     2221 tccgccgttc ccgtggacct ggtgtcggct ccgggcagcg atgccctggc tgaactcggg
     2281 gcctgcgcgg cgctggatct ggaggctcct gccgcagtgg cggcctggtg cgcggcgaac
     2341 caccccgacc tggtggtggc ggggcccgag gtgcccctgg tggctggtgt ggccgatgcg
     2401 gtgcggatgc tgggcatccc ggtcttcggc cacgatgccg ccacggcgcg gctggagggc
     2461 agcaaggcgg cggccaaggc cttcatggaa cggcaccaca tcccctgcgc tgccagtcac
     2521 acggtgacgg atcttgccga gggcgaggcg ttgatccgcg gctggaccta cggctatccc
     2581 atcgtgctga aggccgatgg gctggcggcg gggaagggcg tggtactggc ggaaagcgag
     2641 gccgaggccc tggccacctt ccgggccttc atggccggac agttcggcga tgccagcagg
     2701 acggtggtgt tcgaagcgcc cctggtgggc atggaactgt ccctgcacgt gctggtggat
     2761 gtggatgccg atcacgccgc ctttgccatg ctgcccgcct gccaggacca caagcgcatc
     2821 ttcgaaggcg accggggccc caacaccggc ggcatgggcg ctttcggccc catccccttc
     2881 ctgcgccccg gggacatcga gcgcatgcgc accgcgctgg tggagcccac ggtgcgcggc
     2941 ctccagacgg atggcctcgc ggcccggggc gtgctgttcc tgggggtcat gtggacggcc
     3001 tcgggcccga agctgctgga atacaac
//
LOCUS       DASUDT010000059         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_820622, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000059 DASUDT010000000
VERSION     DASUDT010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820622"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VFV26_01305"
     CDS             complement(<1..1201)
                     /locus_tag="VFV26_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX4844821.1"
                     /translation="MADDVLLPPTPDESPKLPEELPVLPLRDVVVYPYVILPLSVSRE
                     KSIRAIDTALVENRMILLLSQKQVEIDNPKPEDLYQVGTAALIMRVLKLPDGRIRALV
                     QGLQRVRVEYFTETENLFKARVEPLAEPELASPDLEQDALLRSVKQTLEKAVALGKTL
                     PQEVLVIAGNLDNPGRLADLVASNLDLKLQQTQEVLEIAHPGLRLRRVNELLMREIQL
                     LEVQQKITMEARGEMDKSQREYYLRQQLKAIQQELGEGSELAEEIAAFRDKLAKMKVP
                     EDPLVEIERNLKKLERMHPDSSETAVTRTYLEWMTELPWGSVTEDNLDLKQAQQVLDE
                     DHFGLAKIKDRLLEFLAVRKLKPDLRGTILCFVGPPGVGKTSLGKSIARALGRKYARI
                     SLGGVHDE"
     gene            complement(1229..1807)
                     /gene="nrdR"
                     /locus_tag="VFV26_01310"
     CDS             complement(1229..1807)
                     /gene="nrdR"
                     /locus_tag="VFV26_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEX4844822.1"
                     /translation="MRCPFCGHLEDKVVDSRESREGDSIRRRRECLSCARRFTSYERV
                     EEVPLVILKKDGRREPFDRQKVMKGLLLACQKRPVSLARIEQLVGDLHARLMERPDRE
                     IRSRELGELIMDELKGLDQVAYVRFASVYRDFKDLPDFVKALEGLMHKEAAGARNGTA
                     PAAPPAPEPVKPVPQALFPGEADAPVLRTRKK"
     gene            complement(1814..>2045)
                     /locus_tag="VFV26_01315"
     CDS             complement(1814..>2045)
                     /locus_tag="VFV26_01315"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX4844823.1"
                     /translation="KAKVEVVGYEDHAEAILDTVDKVTRITQVRLRPVIRVTRGTSMA
                     KVVELFEKAHKYCFVANSVTCEAVMEPRVVEV"
BASE COUNT          291 a          685 c          693 g          376 t
ORIGIN      
        1 tctcgtcgtg gacgccgccg agggagatgc gggcgtactt gcgtcccagg gcccgggcga
       61 tggatttccc gagggaggtc ttgcccacgc ccggagggcc gacgaagcag aggatggtgc
      121 cgcggaggtc gggcttcagc ttgcgcacgg ccaggaactc cagcaggcgg tccttgatct
      181 tggccaggcc gaagtgatcc tcgtccagca cttgttgagc ctgcttgagg tccaggttgt
      241 cctcggtgac gctgccccag ggcagctcgg tcatccactc caggtaggtg cgcgtcaccg
      301 cggtttcgct ggaatccggg tgcatgcgct ccagcttctt caggttgcgc tcgatctcca
      361 ccaggggatc ctcgggcacc ttcatcttcg ccagcttgtc gcggaaggcg gcgatctcct
      421 cggccagctc gctgccctcg cccagttcct gctggatggc cttgagctgc tggcggaggt
      481 agtactcccg ctggctcttg tccatctcgc cgcgggcctc catggtgatc ttctgctgca
      541 cttccaggag ctggatctcc cgcatgagca gctcgttcac ccgccggagc cgcaggcccg
      601 ggtgggcgat ctccaggacc tcctgagtct gctggagctt gaggtccagg ttggaggcca
      661 ccaggtccgc taggcggccc ggattgtcca ggttgcccgc gatgaccagc acctcctggg
      721 gcagggtctt gcccagggcc acggcctttt ccagcgtctg cttcacgctg cgcaggaggg
      781 cgtcctgctc caggtccggc gaggccagct cgggctcggc caggggctcc actcgggcct
      841 tgaagaggtt ctcggtttcg gtgaagtact cgacccgcac gcgctggagg ccctgcacca
      901 gggcccggat gcggccgtcc ggcagcttca gcacgcgcat gatgagggcc gccgtgccca
      961 cctggtagag gtcctcgggt ttggggttgt cgatctccac ctgcttctgg gagagcagca
     1021 ggatcatgcg gttctccacc agggccgtat cgatggcccg gatggacttc tcccggctga
     1081 cgctgagggg caggatcaca taggggtaga ccaccacgtc ccgcaggggc agcaccggca
     1141 gctcttccgg cagcttgggg gattcgtcgg gcgtgggggg caggaggaca tcatcggcca
     1201 cggaaaaacc tcggtccaca ggatagcgct acttcttccg tgtcctgagg acgggcgcat
     1261 ccgcctcccc ggggaacagg gcctggggca ccggcttgac gggttccggc gcaggggggg
     1321 cggcaggcgc agtcccgttc cgcgcgccgg cggcctcctt gtgcatgagg ccttccaggg
     1381 ccttcacgaa gtcgggcaga tccttgaaat cgcggtacac gctggcgaag cgcacgtagg
     1441 ccacctggtc caggcccttc agctcgtcca tgatcagttc gcccagctcc cggctgcgga
     1501 tctcgcggtc gggccgctcc atgagccggg cgtgcaggtc gcccaccagc tgctcgatgc
     1561 gggccaggga tacgggccgc ttctggcagg ccagcagcag gcccttcatg accttctggc
     1621 ggtcgaaggg ctcgcgccgc ccgtccttct tgaggatcac caggggcacc tcctccaccc
     1681 gctcgtagct ggtgaagcgg cgggcgcagg acaggcattc ccggcgccgc cggatggaat
     1741 cgccctcgcg ggactcccgc gaatccacca ccttgtcctc gaggtgtccg cagaagggac
     1801 agcgcatggg cggctagacc tccaccacgc ggggctccat gaccgcctcg caggtgacgg
     1861 agttcgccac gaagcagtac ttgtgggcct tttcgaacag ttcgaccacc ttggccatgc
     1921 tggtgccccg cgtcacgcgg atgacggggc gcaggcgcac ctgggtgatg cgcgtgacct
     1981 tgtccaccgt gtcgaggatg gcttccgcgt ggtcctcgta gcccacgacc tccaccttcg
     2041 ccttg
//
LOCUS       DASUDT010000060         2376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_224069, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000060 DASUDT010000000
VERSION     DASUDT010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224069"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2269)
                     /locus_tag="VFV26_01320"
     CDS             complement(<1..2269)
                     /locus_tag="VFV26_01320"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX4844824.1"
                     /translation="MIHPAARFPMLALLMAGSTLAMAASSGTLQGRVVDDQGRAVAGA
                     TLSLSNPVSGYRQRVRSDAKGAFLFQNVPFNVYHLDTDAPGLQPSHLDVDVHSQLPLQ
                     VAVALKPEGAVVVVEEKLQLVEDHPSTHIDIDKTTIERTPAAVQSRAMESILLTTPGF
                     IADENGRFHFRGSHGQMTYVVDGIPVSDQMHATFSNSMDPSQVESMEVITGGISAEYG
                     GKPVVVVNLTTKSGLGTPDGFAGEVSFGASRFRTAEAGLSLRGGKDSFGWFVSAAASE
                     SDRFLDPVNFENLHNHGKTGRVFSRFDWILGSRDTLRFSVSGGRTGRDVANLASQEAR
                     GQDQRAATSDANLSLAWTHFVSDHQSFDVSLFYRGSRAELKPSEELADGFSGAGARDF
                     PYWMTQDRSLDNLGLQASFTQRWGNENLLKAGIQRIAFPIHEAFRFAITDDALVAGPG
                     DPLYPYTPSGGGQVFRFDARIRPTLTSAFVQNDLHLGAFFLALGLRHDTYKVEDVSDS
                     LLQPRLGLSYRLGATGTVFRVSYDRLMILREHENLALSLSQQAWDLGPFAGTPRQPLR
                     PERQHSHSYGVEQQLGKVGRLMVEYWEKRSRNAGDNAQFLNTGVLFPVGADRGLFRGM
                     NLRLDLVPVKGWSAYLSLGRTRAIFQAPLVGGLQLEAPEAAPGERFLIDHDQKLSAQF
                     GLIYEQGGLTAQLIGRYDSGLVAADPAAAGGDADYAFGAPYVRLDAEGTWRIRPRTTW
                     NLSLGRAWELTGRRRL"
BASE COUNT          367 a          781 c          855 g          373 t
ORIGIN      
        1 ccaggcgccg ccgtccggtc agctcccagg cccggcccag gctcaggttc caggtggtgc
       61 ggggccggat gcgccaggtg ccttcggcgt ccagccgcac gtagggcgcg ccgaaggcgt
      121 aatccgcatc tccccccgca gccgcgggat ccgccgccac caggcccgag tcgtagcggc
      181 cgatgagctg ggccgtgagg ccgccctgct cgtagatcag cccgaactgg gcgctgagct
      241 tctgatcgtg gtcaatgagg aaccgctcgc cgggcgcggc ctcgggggcc tccagctgga
      301 ggccgcccac caggggggcc tggaagatgg cccgggtgcg gcccaggctc aggtaggccg
      361 accagccctt cacaggcacc aggtccaggc gcaggttcat gccccggaag aggccccggt
      421 ccgcgcccac gggaaacagc acgccggtgt tcaggaactg ggcgttgtcg ccggcgttgc
      481 ggctgcgctt ctcccagtac tcgaccatca ggcgccccac cttgcccagc tgctgctcca
      541 caccgtagct gtgggaatgc tggcgctcgg gccgcagggg ctggcgcggc gtgcccgcga
      601 agggccccag atcccaggcc tgctgggaca gggacagggc caggttctcg tgctcccgga
      661 ggatcatcag ccggtcgtac gacacccgga acaccgtgcc cgtggcgccg aggcggtagc
      721 tcaggcccag ccgcggctgg agcaggctgt cggagacatc ctccaccttg taggtgtcgt
      781 ggcgcaggcc cagggccagg aagaaggcgc ccaggtggag gtcgttctgg acgaaggccg
      841 aggtgagggt gggccggatg cgggcatcga agcggaagac ctggccgcca ccggaggggg
      901 tgtacgggta gaggggatcc ccggggcctg ccaccagggc atcgtcggtg atggcgaacc
      961 tgaaggcctc atggatgggg aaggcgatgc gctggatgcc ggccttcagc aggttctcgt
     1021 tgccccagcg ctgcgtgaag gaggcctgga ggcccaggtt gtccagggag cggtcctgcg
     1081 tcatccagta ggggaagtcc cgggccccgg cccccgaaaa accgtccgcc agctcctcgc
     1141 tgggcttcag ttccgcccgg gagccccggt agaagagcga cacgtcgaag ctctggtggt
     1201 cgctgacgaa gtgggtccag gccaggctca ggttcgcgtc ggaggtggcg gcccgctggt
     1261 cctgcccccg ggcctcctgg gaggccaggt tggccacgtc gcgcccggtc cgcccgccgg
     1321 acacggagaa gcgcagggtg tcccggctgc ccaggatcca gtcgaagcgg gagaagacgc
     1381 gccccgtctt cccgtggttg tgcaggttct cgaagttcac cgggtcgagg aagcggtcgc
     1441 tttcgctggc ggcggcgctc acgaaccagc cgaaggaatc cttcccgccg cgcagggaga
     1501 ggcctgcctc cgccgtgcgg aaccgggagg ccccgaagga gacctcgccc gcgaagccat
     1561 ccggcgtgcc caggccggac ttcgtggtga ggttcaccac caccacgggc ttgccgccgt
     1621 actccgcgga aatgcccccg gtgatgacct ccatgctctc cacctgggag ggatccatgc
     1681 tgttgctgaa ggtggcgtgc atctggtccg agaccgggat gccgtccacc acgtaggtca
     1741 tctgcccgtg gctgccccgg aagtggaagc ggccgttctc gtcggcgatg aagccgggcg
     1801 tggtgaggag gatgctctcc atggcccggc tctgcaccgc cgccggcgtg cgctcgatgg
     1861 tggtcttgtc gatgtcgatg tgcgtgctgg ggtggtcctc caccagctgc agcttctcct
     1921 ccaccaccac cacggcgccc tcgggcttga gggccacggc cacctggagg ggcagctggc
     1981 tgtggacgtc cacatccagg tggctgggct gcaggcccgg cgcatcggta tccaggtggt
     2041 agacgttgaa gggcacgttc tggaagagga aggcgccctt ggcatcgctg cgcacccgct
     2101 ggcggtagcc ggatacgggg ttggacaggc tgagggtggc tcccgccacg gcccggccct
     2161 ggtcgtccac cacccggccc tgcagcgtgc cgctgctcgc ggccatggcc agggtggacc
     2221 ccgccatcag cagggccagc atgggaaagc gagcggcggg atggatcaag gcggcctcca
     2281 gatgaaatta ttttttgatt aggcccattc gtcaatggaa atgattttta tttactatct
     2341 attgagacac taaacccttg gggcattcca gcgaag
//
LOCUS       DASUDT010000061         2417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1395051, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000061 DASUDT010000000
VERSION     DASUDT010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395051"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VFV26_01325"
     CDS             <1..725
                     /locus_tag="VFV26_01325"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4844825.1"
                     /translation="MAEPSFIDQSKLRFREGEIIFRKGEMAQQMYIILSGRIRLYVSE
                     EAKGDWVEELSKGDFFGEGSLLEALPRQHTALALEDSDLIAINRGTFMRMIRQNPEVS
                     VKMMQRLAQRHRELGERVEALDASRPQKSADAPVANLVSVLSGKPHPILSHGSLIGRF
                     DPTTGVHPDIDLTDEDHNLSVSRRHARILCEHGRYFLLEEPGVANGTFVRGERILPGE
                     PRELKHGDRVGFGMVVLFFEKT"
     gene            762..989
                     /locus_tag="VFV26_01330"
     CDS             762..989
                     /locus_tag="VFV26_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844826.1"
                     /translation="MGTDLHVELWRDEHGVIRELVQFGLDEIGGACVIRERNSLDALD
                     GDANEGDTVVARFGDPEDARDFLRDEGFEPI"
     gene            1075..1524
                     /locus_tag="VFV26_01335"
     CDS             1075..1524
                     /locus_tag="VFV26_01335"
                     /inference="COORDINATES: protein motif:HMM:NF019238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1569 domain-containing protein"
                     /protein_id="HEX4844827.1"
                     /translation="MQSLFNPADRESLSHRLAALEPSAQRQWGKMDPAQMLKHCAIAL
                     GDLLGDRPVKQVFLGKLITPLIRGQIFGEKPFRRNSPTDPIYVVSDPQDFEAERARLA
                     TLIDRVVQRGTSKTEGMVHPFFGRLSGDQWGRLIYKHFDHHLRQFGV"
     gene            complement(1683..>2417)
                     /locus_tag="VFV26_01340"
     CDS             complement(1683..>2417)
                     /locus_tag="VFV26_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX4844828.1"
                     /translation="DAVKAKGATVLLAAATAVGKDVAPRAAARLGAGYASDVTGLSMV
                     DGKLQAVRPVYAGKAFATTSFASAIQVATTRPNVFPATEKAGAGAAEALSTPAGDFKS
                     VVKEILAKASGKVDLSEANVIVSGGRGMKDGANFKILEELADAIGGVVGASRAAVDAG
                     WGLPHSMQVGQTGKVVSPTLYIACGISGAIQHIAGMSGSKFIVAINKDPEAPIFKLAD
                     YGIVGDLFEVVPELTKAAKALGIGSN"
BASE COUNT          402 a          794 c          814 g          407 t
ORIGIN      
        1 gcatggctga acccagcttc atcgatcaaa gcaagctgcg cttccgcgaa ggcgagatca
       61 tcttccgcaa gggggagatg gcccagcaga tgtacatcat cctttcgggg cggatccggc
      121 tctatgtgtc ggaagaggcc aagggcgatt gggtggagga actgtccaag ggggacttct
      181 tcggggaggg cagcctcctg gaggccctcc cccgccagca cacggccctg gccctggagg
      241 attcggatct catcgccatc aaccgcggca ccttcatgcg catgatccgg cagaacccgg
      301 aagtctccgt gaagatgatg cagcgcctgg cccagcggca ccgggaactg ggcgagcggg
      361 tggaggccct ggatgcctcc cggccccaga aatccgcgga cgcgccggtg gcgaacctgg
      421 tctccgtgct cagcggcaag ccgcacccca tcctgtccca cggctccctc atcggccgtt
      481 tcgatcccac cacgggcgtg cacccggaca tcgacctgac ggacgaggac cacaacctga
      541 gtgtgtcccg gcgccatgcc cgcatccttt gcgaacacgg ccgctatttc ctcctggagg
      601 aacccggcgt ggccaacggc accttcgtgc ggggggaacg gatcctgccc ggcgaacccc
      661 gggaactgaa gcacggggac cgcgtgggtt tcggcatggt ggtgctgttc ttcgagaaga
      721 cctaactttc ctgccgcatg gaaacgttag aggagaaaag catgggcacg gaccttcatg
      781 ttgagctttg gcgggatgag catggtgtca tccgggagct ggtccagttc gggctggatg
      841 agatcggcgg ggcctgcgtg atccgcgagc gcaacagtct ggatgcgctg gacggcgacg
      901 cgaacgaagg cgataccgtc gtcgcccgtt tcggcgatcc cgaggatgcc cgggatttcc
      961 tccgggacga aggctttgag ccgatctagg tcttgccatc tccagaccat ggcccggcga
     1021 cgccgggcca tggtctggag cgagaagcga tagtcgtggt ggaggaagac aacgatgcag
     1081 tccctgttca acccggctga ccgggagtcc ctgtcccatc gcctggccgc cctggagccg
     1141 agcgcccagc gccagtgggg gaagatggat ccggcccaga tgctgaagca ttgcgccatc
     1201 gccctgggcg atctcctggg ggatcgtccc gtgaagcagg tcttcctggg aaagctgatc
     1261 acgcccctga tccgggggca gatcttcgga gagaagccct tccgccgcaa ctcccccacc
     1321 gatcccatct acgtggtgtc cgatccccag gacttcgaag ccgagcgcgc ccggctggcc
     1381 accctcatcg accgcgtggt ccagcgcggc acctcgaaga ccgagggcat ggtccacccc
     1441 ttcttcgggc ggctcagcgg cgaccagtgg ggacggctga tctacaagca cttcgaccat
     1501 cacttgaggc agttcggggt ttgatgctgt ccggggggac cgcctgctcg cggtgctcgc
     1561 gatgtccccc cggagccccc acgcctcgac cgggcaaagc ccggcctcgg cgtccgaatc
     1621 ctttccccta cttgcaaaat cgcccggcgg atgccgggcg gttttgcaag catggacaaa
     1681 gcttaattgg aaccgatccc cagggccttg gcggccttgg tcagttcggg caccacctcg
     1741 aacagatcac ccacgatccc gtagtccgcc agcttgaaga tgggggcctc ggggtccttg
     1801 ttgatggcga cgatgaactt cgagccgctc atgccggcga tgtgctggat ggcgccgctg
     1861 atgccgcagg cgatgtagag ggtgggactc acgaccttgc cggtctggcc tacctgcatg
     1921 ctgtggggca ggccccagcc cgcgtccacg gcggcccggg aggcgcccac cacgccgccg
     1981 atggcgtccg ccagctcctc aaggatcttg aagttggccc cgtccttcat gccgcggccg
     2041 ccgctcacga tgacgttggc ctcgctgagg tccaccttgc cgctggcctt ggccaggatc
     2101 tccttcacca cggacttgaa gtccccggcg ggggtggaga gggcctcggc cgcgcccgca
     2161 ccggcctttt cggtggcagg aaacacgttg ggccgggtgg tggccacctg gatggcgctc
     2221 gcgaaagagg tggtggcaaa ggccttgccg gcgtagacgg gacggacggc ctggagcttg
     2281 ccgtccacca tggagaggcc cgtgacgtcg gaggcgtagc cggcgcccag gcgggcggcg
     2341 gcgcgggggg ccacgtcctt gcccacggcg gtggcggcgg cgagcagcac cgtggcgccc
     2401 ttggccttca cggcatc
//
LOCUS       DASUDT010000062         3528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1284714, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000062 DASUDT010000000
VERSION     DASUDT010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284714"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..864)
                     /locus_tag="VFV26_01345"
     CDS             complement(<1..864)
                     /locus_tag="VFV26_01345"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4844829.1"
                     /translation="MATRKAGFRGIGTENVKFAFRAMVAQKLRSFLTLLGIVAGVATV
                     IAMVSFVSGFNGAVTDSFSAFGTTLVQFQKYEQRFGGGGPLPEDQKRRRDLTIEDAEA
                     LKRTATLAAAVSQERYLFGPAGASLTVKTPEGTEANGPTFVGTNPDYAPANNSYIQDG
                     RFLVEADVAHASRACVLGPETATALFGRKDPIGRAVLVNGTAFHVVGLLEKKGSFLGG
                     DADNILIIPISTFDDMFPQIKNGGGDTIHIATVPKDPKRMNEMMDQEVAILRARRGLR
                     ANQPNDFAIFTS"
     gene            complement(867..2093)
                     /locus_tag="VFV26_01350"
     CDS             complement(867..2093)
                     /locus_tag="VFV26_01350"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4844830.1"
                     /translation="MNPTELLRASLRAIRAHTLRSFLTLLGVIIGVATIVAVVGVISG
                     LNTYVKEKIIVLAPDVFIVQKFGIIRSRKEFLDAIKRPPITWSEYERFSSGLLKEASQ
                     VSAASGRAMAVNYGDKRLPDVVVIGATGNFGDLFSLEMESGRYFSESENEASLAVAVI
                     GANTKEELFPHLDPVGRTLLIRGLPFRIIGVMPKQGRSIGFNQDGRIYIPLQVYRKNF
                     MAANESLELHIKARGGVEGLDASMDEVRALFRAMRHTGFRSPDPFGLLTQESLQQLWR
                     TISSAAFLLLMLISSVSLGVGGIVIMNIMLVSVVERTQEIGVRMALGARKRDIRRQFL
                     LEAALLSAAGGVAGVLVGSAGAFTVRALAGFPAQITPGIVLTGILLSTLVGLAAGFLP
                     AYRASNLVVIDAIRSE"
     gene            complement(2107..3333)
                     /locus_tag="VFV26_01355"
     CDS             complement(2107..3333)
                     /locus_tag="VFV26_01355"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4844831.1"
                     /translation="MKRKQLWILGGGLAVVLIGGLSVAGMKDKGLAVQVATVGRENLQ
                     AKVSANGKVQAVKKVDISANVMGQVTKLAVKEGDVVKAGAFLMEIDPARSRATADAQA
                     AASEASAKDWESARARLQQARSDFARAEANRQAGIISQSDFEQLRTTLTTTEAAALAS
                     QRRYEQSKAGLRDATIYLAKSTIKAPMDGVVTARRIELGETAVIGVQNQAGTILLTIS
                     DMSKVEAEMEVDEASIPSVKLGQEAQVRIDAYPNQTFQGQVTEVGGSPILKTSLNEAT
                     KFKVKVWIKNPPLTIKPGLSAQADIFTGSRDQALAIPFQALVMREIKLKPGETHKPGA
                     PREEEGVFLQEGGKAKFVAVKTGLMGDLSVEVLSGLKGGETLITGPNRALRDLKGGEA
                     VRVEKAKKKDKDEAKA"
BASE COUNT          527 a         1112 c         1249 g          640 t
ORIGIN      
        1 gctggtgaag atggcgaagt cgttgggctg gttggcccgc aggccccgcc gggcccggag
       61 gatggccact tcctggtcca tcatctcgtt catgcgcttg ggatccttcg gcaccgtggc
      121 gatgtggatg gtgtcgccgc caccgttctt gatctggggg aacatgtcgt cgaaggtgct
      181 gatggggatg atcaggatgt tgtcggcatc gccgcccagg aagctgccct tcttctccag
      241 aaggcccacc acgtggaagg cggtgccgtt cacgagcacg gcgcggccga tgggatcctt
      301 gcgcccgaac agcgccgtgg ccgtctcggg gccgaggacg caggcgcggg aggcatgggc
      361 cacatcggct tccaccagga agcggccgtc ctggatgtag ctgttgttcg cgggggcata
      421 gtcgggattg gtgcccacga aggtggggcc gttggcctcg gtgccctcgg gcgtcttgac
      481 cgtgagggag gcgcccgccg ggccgaagag gtagcgctcc tgggagacgg cggccgccag
      541 cgtggcggtc cgcttgaggg cctcggcgtc ttcgatggtg aggtcgcggc ggcgcttctg
      601 gtcctcgggc agggggccgc cgccgccgaa gcgctgctcg tacttctgga actgcacgag
      661 ggtggtgccg aaggcgctga agctgtcggt gacggcgccg ttgaagcccg atacgaagct
      721 caccatggcg atgaccgtcg ccacgcccgc cacgatgccc agcagggtga ggaagctccg
      781 cagcttctgc gccaccatgg cgcggaaggc gaacttcacg ttctcggtgc cgatgcccct
      841 gaatcccgcc ttccgcgtgg ccatggctac tccgaccgga tggcgtcgat gacgacgagg
      901 ttggaggccc ggtaggcggg caggaagccc gcagccaggc ccacgagggt gctgaggagg
      961 atgcccgtga ggacgatgcc cggcgtgatc tgggccggga agcccgccag ggcccgcacg
     1021 gtgaaggcgc ccgccgatcc caccagcacc ccggcgacgc cgcccgccgc ggaaagcagg
     1081 gccgcctcca ggaggaactg gcggcggatg tcgcgcttgc gggcgcccag ggccatgcgg
     1141 acgccgatct cctgggtgcg ctccacgacg ctcaccagca tgatgttcat gatgacaatg
     1201 ccgcccacgc ccaggctcac gctggagatg agcatgagca gcaggaaggc cgcgctgctg
     1261 atggtccgcc agagctgctg gaggctctcc tgggtgagga ggccgaaggg atcggggctg
     1321 cggaagccgg tgtggcgcat ggcccggaac agggcgcgga cctcgtccat ggaggcgtcc
     1381 agcccctcca cgccgccccg ggccttgatg tgcagctcca ggctctcgtt ggcggccatg
     1441 aagttcttcc ggtagacctg gagcgggatg tagatgcgcc cgtcctggtt gaagccgatg
     1501 ctgcgcccct gcttgggcat gaccccgatg atgcggaagg gcaggccgcg gatgaggagg
     1561 gtgcgcccca cgggatcgag gtgggggaac agctcctcct tggtgttggc gccgatgacg
     1621 gccacggcca gggaggcttc gttctcgctc tcgctgaagt agcggccgga ttccatctcc
     1681 aggctgaaga ggtcgccgaa gttgccggtg gcgccgatga cgaccacatc cggcagccgc
     1741 ttgtcgccgt agttgacggc catggcccgg ccggaggcgg cggagacctg gctggcctcc
     1801 ttgagcaggc cgctggagaa ccgctcgtat tcgctccagg tgatgggcgg gcgcttgatg
     1861 gcgtcgagga attccttgcg gctccggatg atgccgaact tctggacgat gaagacgtcc
     1921 ggcgccagga cgatgatctt ctccttcacg taggtgttca ggccggagat cacgcccacc
     1981 accgccacga tggtggccac gccgatgatg acgcccagca gcgtgaggaa gctgcgcagg
     2041 gtgtgcgccc ggatcgccct cagggaggcg cggaggagtt cggtggggtt catggggcgt
     2101 ccggactcag gccttggcct cgtccttgtc cttcttcttc gccttctcca cccgcaccgc
     2161 ctcgccgccc ttgaggtcgc gcagcgcccg gttggggccg gtgatgagcg tttcaccgcc
     2221 cttcaggccg gagaggactt ccacggagag gtcgcccatg aggccggtct tcacggccac
     2281 gaacttggcc ttgccgcctt cctggaggaa gacgccctcc tcctcgcggg gagcgccggg
     2341 cttgtgggtc tcgccgggct tgagcttgat ctcacgcatc accagggcct ggaaggggat
     2401 ggcaagggcc tggtcgcggc tgcccgtgaa gatgtcggcc tgggccgaaa ggccgggctt
     2461 gatggtgagg ggcggattct tgatccagac cttcaccttg aacttggtgg cttcgttgag
     2521 gctggtcttg aggatggggc tgccgcccac ttccgtgacc tggccctgga aggtctggtt
     2581 ggggtaggcg tcgatgcgca cctgggcctc ctggcccagc ttcacgctgg ggatggaggc
     2641 ttcgtccacc tccatctccg cctcgacctt gctcatgtcc gagatggtca ggaggatggt
     2701 gccggcctgg ttctgcacgc cgatgacggc ggtctcgccg agttcaatgc gccgggccgt
     2761 caccacgccg tccatgggcg ccttgatggt ggacttcgcc aggtagatgg tggcgtcccg
     2821 gaggcccgcc ttgctctgct cgtagcggcg ctgggaagcc agggcggcgg cttcggtggt
     2881 ggtcagggtg gtgcggagct gctcgaaatc ggattgggag atgatgccgg cctggcggtt
     2941 ggcttcggcc cgcgcgaagt cgctccgggc ctgctggagg cgggcccggg cggattccca
     3001 gtccttggcc gaggcctcgg aggcggcggc ctgggcatcc gccgtggccc gggaccgggc
     3061 cgggtcgatt tccatgagga aggcgccggc cttcaccaca tcgccctcct tcacggccag
     3121 cttggtgacc tggcccatga cgttggcgga gatgtccacc ttcttcacgg cctgcacctt
     3181 gccattggcg ctcaccttgg cctggaggtt ctcccgtccc accgtggcca cctgcacggc
     3241 caggcccttg tccttcatgc cggcgacact gaggccgccg atcaggacga ccgccagacc
     3301 tccaccgagg atccacagct gctttcgctt catgtcaaag gcctcccgat cgggctgaac
     3361 gcatctcaat cttcgctgga atgccccaag ggtttagtgg ttcaacgaat aacaaataaa
     3421 aatcatttcc attgacggag tatcgcaatt aaaaaataat ttcatctgga gggccccctt
     3481 gatccattcc acagctcgct ttcccatgct ggccctgctg atggcggg
//
LOCUS       DASUDT010000063         3210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1284809, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000063 DASUDT010000000
VERSION     DASUDT010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284809"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VFV26_01360"
     CDS             complement(<1..693)
                     /locus_tag="VFV26_01360"
                     /inference="COORDINATES: protein motif:HMM:NF017039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844832.1"
                     /translation="MSTPMLQQIAGLKREAGDAVLLTRMGDFYEILGEDAVRAAPVLE
                     IALTMRGKGSESETPMCGVPHFALESYLPKLLAAGFSAAIAEPTAKPEEVKGLLPRAI
                     KRIITPGTWLDDDARWLCALHRCGSTWGLALLQLASGALRVLPGEGEEALRATLERLG
                     PQELILAEGAGDIPDLEAARTRLPAWRFEASRARQQVLAFFGWQHLEGVGLDPYPAAL
                     GALAALLDQVEAT"
     gene            complement(726..1166)
                     /locus_tag="VFV26_01365"
     CDS             complement(726..1166)
                     /locus_tag="VFV26_01365"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4844833.1"
                     /translation="MAEESGDLELASLTEVVLGCAIKVQRGLGPGLLESAYESCLAYE
                     MENAGLRVQRQVPLDITYGEVHIPAAYRLDLLVEDLIVLELKTVERLTDFHEAQLLTY
                     LRFSGKRLGLLLNFWRWPLKDGGIKRILNPRVPPLSSAPPQSSA"
     gene            1286..2518
                     /locus_tag="VFV26_01370"
     CDS             1286..2518
                     /locus_tag="VFV26_01370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase-like protein"
                     /protein_id="HEX4844834.1"
                     /translation="MTPAETAFDRCRGDFPSLARQQDGQPLAYFDGPGGTQVPRSVIQ
                     AISGYYEQGAANSHGQFATSEETDRLIQNARKTAAALLGAPDWHAISFGANMTSLAFA
                     LGRALGRAISPGDEIVITQLDHEANRGPWKALAERGAVIREVALRPDGTLDPEDFARQ
                     VTSRTRLVAVGYASNLLGTVNDLALARSLASAVGAWLLVDAVHGAPHFPLDVAALGAD
                     FLLCSVYKFYGPHVGILYTRPGLLETLEPDRLCTVDQAAPWRIETGTLHHAALAGLVA
                     AIEYLAGFGEGGDLRSRLLEAMARIEAREGRLARRYAEQAATIRGLKVWGPAFGAGRR
                     SPTVAVTLEGVHPTEAARRLGERGVLVGDGHFYAARAVEVLGLAERGGVIRAGMSLYT
                     TDAEVDRLLEGLAILARH"
     gene            2518..>3210
                     /locus_tag="VFV26_01375"
     CDS             2518..>3210
                     /locus_tag="VFV26_01375"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4844835.1"
                     /translation="MERVDCIVIGAGVVGLALARHLALQGREVVLLEAEDRVGTGISS
                     RNSEVIHAGIYYPAGSLKARLCVSGNRALYAFCETHHVAHRRCGKLIVATDPTQVAAL
                     RSLQARAEANGVADLQWLDAPEARRLEPELRCEAALLSPSTGIVDSHGLMRALRMDAE
                     AAGAALVLKSPVTGGLDTPEGLRIEVGGAEPMHLLARRVFNCAGLGALALAHRFAGIR
                     RDALPPLPRTFAK"
BASE COUNT          499 a         1141 c         1091 g          479 t
ORIGIN      
        1 ggtggcctcc acctgatcga gcagggccgc cagggcgccc agggccgccg ggtaggggtc
       61 gagccccacc ccttccaggt gctgccagcc gaagaaggcc agcacctgct ggcgggcccg
      121 ggaggcctcg aagcgccagg cgggcagccg cgtgcgggcg gcctccagat cggggatgtc
      181 cccggcgcct tcggccagga tcagctcctg ggggcccagg cgctccaggg tggcccgcag
      241 ggcttcctcg ccttcaccgg gcagcacccg cagggcgccg gaggccagct gcagcagggc
      301 caggccccaa gtggatccac agcgatgcag ggcgcagagc cagcgcgcat cgtcatccag
      361 ccaggtgccg ggcgtgatga tgcgcttgat ggcccggggc agcaggccct tgacctcttc
      421 aggcttggcg gtgggctcgg cgatggcggc ggaaaagccc gccgccagga gcttcggcag
      481 gtaggactcc agcgcgaagt ggggcacgcc gcacatgggc gtttcggatt cggagccctt
      541 gccgcgcatg gtcagcgcga tctccagcac cggcgccgcc cgcaccgcgt cctcgcccag
      601 gatctcgtag aagtccccca tgcgcgtgag cagcacggca tcccccgcct cgcgcttgag
      661 gccggcgatc tgctggagca tgggcgtgga catgggggct cgtagaatga aaagaacgga
      721 tcaggttaag cggaggattg cggaggggcc gaggaaagcg gaggaacacg agggttcaga
      781 atccgcttga tgcccccgtc cttcaggggc cagcgccaga aattcaggag aagacccagc
      841 cgttttccag agaatcggag ataggtcagg agctgtgcct cgtggaaatc cgtcaagcgt
      901 tccaccgttt tcagttccag aacgatcagg tcctccacca acaaatcgag ccggtaggcg
      961 gcggggatgt gaacttcccc gtaggtgatg tcgagtggaa cctgtcgctg gacacgaagt
     1021 cccgcatttt ccatttcata agccagacaa ctttcatagg cgctttcgag caatccagga
     1081 ccgagcccac gttgaacttt aatggcacac cccaggacca cctcggtgag agatgccaac
     1141 tcaaggtctc cgctttcctc cgccactccg cactcctccg cttccgaccc agcagttagc
     1201 accggaatgg gctttcggcc agatgatgcc aatcctcgat cttcccacag gatggtcctg
     1261 gaataatcga ccccgggagt ggcccatgac gccagctgaa accgccttcg accgctgccg
     1321 cggggatttc ccgtcgctcg cccgccagca ggatggacag cccctggcgt atttcgacgg
     1381 ccccggcggc acccaggttc cccgcagcgt catccaggcc atctccggct actacgaaca
     1441 gggcgcagcc aattcccatg gccagttcgc cacctcggaa gagaccgacc ggctcattca
     1501 gaacgcacgg aaaacggccg cggccctgct gggggccccg gactggcacg ccatctcctt
     1561 cggggcgaac atgaccagcc tcgccttcgc cctcggccgg gccctggggc gggcgatctc
     1621 tccgggcgac gagatcgtca tcacccagct ggatcacgag gccaaccgtg gcccctggaa
     1681 ggccctggcc gagcggggcg ccgtgatccg ggaagtggcc ctccggcccg acggcaccct
     1741 cgatcccgag gacttcgcgc ggcaggtgac gtcccgcacc cgcctggtgg ccgtgggcta
     1801 cgcctccaac ctcctgggca cggtgaacga cctggccctg gcccgctcct tggcatccgc
     1861 cgtgggagcg tggctgctgg tggacgcggt gcatggcgca ccgcatttcc ccctggacgt
     1921 ggcggccctg ggcgcggact tcctgctctg ctccgtctac aagttctatg gtccccatgt
     1981 gggcatcctc tacacccgcc cagggttgct ggaaacgctg gaaccggacc gcctctgcac
     2041 cgtggaccag gctgcgccct ggcgcatcga aacgggcacc ctccatcacg cggccctggc
     2101 gggcctggtg gccgccatcg agtacctcgc cggattcggt gaaggcgggg atctccgcag
     2161 ccgcctgctc gaggccatgg cccgcatcga ggcgcgcgag ggccgcctcg cccggaggta
     2221 cgccgagcag gccgcgacca tccggggcct gaaggtgtgg ggcccggcct tcggggccgg
     2281 gcgccgctcc cccaccgtgg ccgtcacact ggagggcgtg catcccacgg aggcagcccg
     2341 gcgcctcggc gagcggggcg tgctggtggg cgatggccac ttctacgccg cccgggcggt
     2401 ggaggttctg ggcctggccg agcggggcgg cgtgatccgg gcgggcatgt cgctctatac
     2461 gacggacgcc gaggtggacc ggctcctcga gggtcttgcc atcctggcga ggcactgatg
     2521 gaacgggtcg actgcatcgt catcggcgcc ggcgtggtgg gcttggccct ggcgcggcac
     2581 ctggcgctcc agggccgcga ggtggtgctt ctcgaagcgg aggaccgcgt cggcaccggc
     2641 atcagctccc gcaacagcga ggtcatccac gcggggatct actatccggc gggctccctc
     2701 aaggctcggc tctgcgtctc gggcaaccgc gccctctacg ccttctgcga gacccatcat
     2761 gtggcccacc gccgctgcgg caagctcatc gtggccaccg acccaaccca ggtggcagcg
     2821 ctccggagcc tccaggcccg ggccgaggcc aatggcgtgg cggatctcca gtggctcgac
     2881 gcgcccgaag cccggcggct ggaaccggag ctgcgctgcg aggcggccct gctgtccccc
     2941 agcacgggca tcgtggacag ccacggcctc atgcgggccc tgcgcatgga tgccgaagcc
     3001 gcgggcgccg ccctggtgct gaagagcccc gtcaccggag gcctggacac gccggagggc
     3061 ctgcggatcg aggtgggcgg cgccgaaccc atgcacctgc tggctcggcg cgtcttcaac
     3121 tgcgcgggcc tgggcgccct ggccctggcc caccgcttcg ccggcatccg ccgcgacgcc
     3181 ctgccgcccc tgccccggac cttcgccaag
//
LOCUS       DASUDT010000064         2895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_378866, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000064 DASUDT010000000
VERSION     DASUDT010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378866"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1408)
                     /locus_tag="VFV26_01380"
     CDS             complement(<1..1408)
                     /locus_tag="VFV26_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844836.1"
                     /translation="MTLLLAAAVGIAAHADQPNAAFSGFNDWLGSETRGVRIGADGRL
                     RLAPNLRRVGQLPEGVIWAAVPDGSGGAYLSAGTEGKLFHYAGGQVKPLGQVKGGIVF
                     ALARLGPDLIVAPTGEGKLLRVTPSGDVKPFAEIDARIVWSLAVEGDAVIVAGGSEKG
                     AVLVQAREGSSRRLAELADETAFTALIADGQGGWYLGSHGRGLVLRYSRLGDRLETLM
                     DTPFEEVRALALSDGQLYIGADNGLTPKFSTGQLERREGYLQADAAVTARSAVLRLDK
                     ERVPETLWQSAQSQVYALAAWKGQLLVGTGNRSRLFSLPLGKAPDAESFAVVQELGTA
                     QATAFLPSGGDLLVVGSNPAELHLLSEAQATEGTLESKILRGAPLADWGRAYLEAETP
                     TGTSVEFQFRTGSTETPDATWNPWTPPLRSGERPALPPSRFAQFRLRLGSTRGGATPV
                     VEAVTVHWAHRNLAPVWEG"
     gene            complement(1445..>2895)
                     /locus_tag="VFV26_01385"
     CDS             complement(1445..>2895)
                     /locus_tag="VFV26_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844837.1"
                     /translation="GALSTGIAFEKEPIGGITPIAEMLDQLRDIPEIPSSRTPLILPK
                     LEPPKVLKAALSGQMLDFKALLGDTDPQALPMFIAGSALGPEARSLWSGLPIAFAAGP
                     ALSGGREEASPLEPGGMAAITLMQGDLDLAASGTITYVSGKRILLFGHQLFNLGPVDL
                     PLWSATVASTVASYQGSFKLAMPVAPIGALRLDRSSGVAGLLGAEARMIPLRIGLNLG
                     GKRTLNFRFEIMDHPVATPALAATAVAQTLDAHVRGLGFQSLSMQGNIKLAGQPAILI
                     ENVIADLNPGRMSQYVGGLLQAVSLNPFERPVIEGISLTIKAEERLDLTSIASVRLLK
                     ARAKRGEVLPVLVTLQNIQGVRETATFNLQVSSSAAKGKAILMVGDGFSLMAADPDER
                     MIEVANLGDVVRLLNGALRNNHAYALLVQAQPGAGLRGARIEGIPPSVASLVSGDGAS
                     SDNRLQRRIVGRAVLPLDREVRGLSQLEVEIE"
BASE COUNT          424 a         1014 c         1041 g          416 t
ORIGIN      
        1 cgccctccca gaccggggcg aggttgcggt gcgcccagtg cacggtgacg gcctccacca
       61 ccggcgtggc gccgccccgg gtgctgccga ggcgcaggcg gaactgggcg aaccgcgagg
      121 gcgggagggc cggccgttcc ccgctgcgca gcggcggcgt ccagggattc caggtggcat
      181 ccggcgtttc ggtgctcccg gtgcggaact ggaactccac gctggtgccc gtgggggttt
      241 ccgcctccag gtaggcccgg ccccagtccg ccaggggcgc cccccgcagg atcttggatt
      301 ccagcgtgcc ctccgtggcc tgggcctcgg acagcaggtg cagttcggcg gggttggagc
      361 ccaccaccag cagatccccg ccggagggca ggaaggccgt ggcctgggcc gtgcccagtt
      421 cctggaccac cgcgaaggat tccgcatcgg gggccttgcc caggggcagc gagaagaggc
      481 gcgaacggtt gcccgtgccc accagcagct ggcccttcca ggcggccagg gcgtagacct
      541 ggctctgggc gctctgccac agggtctccg gcacgcgctc cttgtccagg cggaggacgg
      601 cggagcgcgc ggtgacagcc gcatccgcct ggaggtagcc ctcccgccgc tccagctgcc
      661 cggtgctgaa cttgggcgtc aggccgttat cggccccgat gtagagctgg ccgtccgaga
      721 gggccagggc ccgcacctcc tcgaagggcg tgtccatgag tgtctcgagc cggtcgccga
      781 gacggctgta gcgcagcacc agaccccggc catggctgcc caggtaccag cccccctgcc
      841 catccgcgat cagggccgtg aaggccgttt cgtccgccag ctccgccagg cggcggctgg
      901 agccttcgcg ggcctgcacc aggacggccc ccttctccga gccgcccgcc acgatcacgg
      961 catcgccttc cacggcgagg gaccagacga tgcgggcgtc gatctccgcg aaaggcttca
     1021 cgtcgccgga gggcgtcacc cggagcagct tgccttcgcc cgtgggcgcc acgatcagat
     1081 ccgggcccag ccgcgccagg gcgaacacga tgccgccctt gacctggccc aggggcttca
     1141 cctggccgcc ggcgtagtgg aagagcttgc cctccgtccc cgcggaaagg taggctccgc
     1201 cggagccgtc cggcaccgcc gcccagatca cgccttcggg cagctgcccc acacggcgca
     1261 gattgggcgc caggcgcagg cggccgtccg cgccgatgcg cacaccccgg gtctcggagc
     1321 ccagccaatc gttgaacccc gagaaggcgg cgttgggctg atccgcgtgg gcggctatcc
     1381 ccaccgcggc agccaggagc aaggtcatcc agcgcataga accctttcgt gtgcggctca
     1441 tggtctattc gatctccact tcaagctggc tgaggccccg cacctcgcgg tccagcggca
     1501 gcacggcccg ccccacgatg cggcgctgga gccggttgtc gctgctggcc ccgtcgccgc
     1561 tgaccaggct ggccaccgag ggggggatgc cctcgatgcg cgcgccccgc aggcccgcgc
     1621 ccggctgggc ctgcaccagg agggcatagg cgtggttgtt gcggagggcg ccgttcagga
     1681 ggcgcaccac gtcgccgagg ttggccactt cgatcatccg ctcgtcggga tcggcggcca
     1741 tgaggctgaa cccgtcgccc accatgagga tggccttgcc cttggcggcg gaggaggaca
     1801 cctggaggtt gaaggtggcc gtttcccgca cgccctggat gttctggagg gtcacgagca
     1861 ccggcagcac ctcgccgcgc ttggcccggg ccttgagcag gcgcacgctg gcgatgctcg
     1921 tgagatccag gcgctcctcg gccttgatgg tgagggagat gccttcaatg accggcctct
     1981 cgaagggatt gaggctgacg gcctggagca ggccacccac gtactgggac atgcggccgg
     2041 ggttcaggtc cgcgatgaca ttctcgatca ggatggcggg ttgccccgcc agcttgatgt
     2101 tgccctgcat ggacaggctc tggaacccga gcccacggac gtgggcatcc agggtctggg
     2161 ccacggccgt ggcggccagg gcgggggtgg ccacgggatg gtccatgatt tcgaagcgga
     2221 agttcagggt gcgcttgccc cccaggttca ggccgatccg cagggggatc atgcgggcct
     2281 cggcccccag caggcccgcc acacccgaac tgcgatccag cctcagggcc ccgatgggcg
     2341 ccaccggcat ggccagcttg aaggagccct ggtagctggc caccgtcgaa gccaccgtgg
     2401 cagaccacag cggcagatcc acgggcccga ggttgaacag ctggtgcccg aacagcagaa
     2461 tgcgcttgcc ggacacatag gtgatggtgc ccgaggcggc caggtccagg tccccctgca
     2521 tgagggtgat ggccgccatg ccgccgggct cgagggggct ggcctcctca cgtcctcccg
     2581 agagggccgg gcccgcggcg aaggcgatgg gcaggccgga ccacaggctc cgggcctccg
     2641 ggcccagcgc gctgccggcg atgaacatgg gcagggcctg gggatcggta tcccccagga
     2701 gggccttgaa gtccagcatc tgcccggaca aggccgcctt gaggaccttg ggcggctcca
     2761 gcttgggcag gatcaaaggc gtgcggctgg aggggatctc gggaatatcc cggagctggt
     2821 ccagcatttc cgcgatgggc gtaatgcccc cgatgggctc cttctcgaag gcgatgccgg
     2881 tgctcagggc cccga
//
LOCUS       DASUDT010000065         2914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_25620, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000065 DASUDT010000000
VERSION     DASUDT010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25620"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..447)
                     /locus_tag="VFV26_01390"
     CDS             complement(58..447)
                     /locus_tag="VFV26_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844838.1"
                     /translation="MSVMTEVSWGELIDKYTILAIKSERIQDPAKLKNVRAELEALGP
                     VRNQAHGLSAGLAEVEARLKAINEELWVIEDRIRDCERAKDFGPVFVELARSVYFRND
                     ARAEAKREINVLLGSSLVEEKSYQPYV"
     gene            558..1526
                     /locus_tag="VFV26_01395"
     CDS             558..1526
                     /locus_tag="VFV26_01395"
                     /inference="COORDINATES: protein motif:HMM:NF019242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1573 domain-containing protein"
                     /protein_id="HEX4844839.1"
                     /translation="MTPVRYVLPLLVSLALQAQAPAITFDKTHHAFGRITPDRKVAAK
                     YRVTNTGNAILSITQVRPSCGCTATVIGKWSIAPGESTDLEATFDPKGLKGAVRKSIE
                     VISNDPKAMATSLTLEAEVVQEIMPSVESIYFHMAPRSATTRSTLRYASGNGEPVQLV
                     DVKAPGAPFLAFAHRQDGKDLVLEVAFDGRKVPAGRFRGVEQATVRFSNPRMNQLPLN
                     IQWELKPSIQTTPSELVFQDAPGKELRQNLTLKQADGRAFRITGTRCSLSGVRVEGLG
                     QKAASQDITVVLPASLKAGRYSEILSLNTDDPDQPELTIRLAAILK"
     gene            1592..2542
                     /locus_tag="VFV26_01400"
     CDS             1592..2542
                     /locus_tag="VFV26_01400"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4844840.1"
                     /translation="MPESRASHLVAVISLAATAAIWGGGFPATKYCLQAGLSVGALLT
                     IRFAIGAAGLGLLMLLLRVPIRRRDALDGLWLGLVLATLFWLQTDGLRFTTTSKSGFI
                     TGLYVIFTPMVALLAGDRLRPSHGAGALVALLGLALLVREPGAAWGGWNRGDSETFLA
                     AVLCGFHIVMTAHFSRRSSGWVLAFMQVAVTGLISLAITLALPAPHGFQGAGAALSRA
                     GTWVSLGFMGLLATTLAFYVQSTMQARLGATESAIIFSLEPVWTAAIAVSGVVPGIRE
                     HMGPAQLAGGALILAATFVAELGPRLLKRLQRPEPEEAIG"
     gene            complement(2552..>2914)
                     /locus_tag="VFV26_01405"
     CDS             complement(2552..>2914)
                     /locus_tag="VFV26_01405"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEX4844841.1"
                     /translation="VVAGHCAPLRIVRGSQGGLQRSEVLRGKGFMLGLDTQLPFVEHE
                     AEFLPEDRLVLYTDGLVEVERGDRAMLEEAGLRRICAELPAEADEAAGAVIAQARAFN
                     HPAPFVDDVTLVILDRKA"
BASE COUNT          433 a         1067 c          926 g          488 t
ORIGIN      
        1 tgtgcccatg ctctgtgtct ccgtggtgga ttctttagga ttgaacgcga atgggaatca
       61 gacgtagggc tggtaggact tctcttccac caggctggag cccaggagga cattgatctc
      121 gcgcttggcc tcggcccggg cgtcgttccg gaagtagacc gaccgggcca gctccacgaa
      181 gaccggcccg aagtccttgg cccgctcgca atcgcggatc cggtcctcga tcacccagag
      241 ttcttcgttg atggccttga gccgggcctc gacctccgcc aatccggcac tgaggccgtg
      301 ggcctggttc cgcacggggc ccagggcctc cagttcggcc cggacgttct tcagcttggc
      361 cggatcctgg atgcgttcgg atttgatcgc caggatcgtg tacttgtcga tcagttcgcc
      421 ccagctcact tcggtcatca cggacatggc gctttctcca gtccaacagg atagcgggag
      481 cgggcgcatc gggcgccacg acaagaaccc gctttcccgg atagaatttc ggtccttacc
      541 ttctccgccg aggccccatg acccctgtcc ggtatgtcct cccccttctg gtgagcctgg
      601 ccctgcaggc ccaggcaccc gccatcacct tcgacaagac ccaccacgcc ttcggccgca
      661 tcacgccgga ccggaaggtg gccgccaagt accgcgtcac caacaccggc aacgccatcc
      721 tgagcatcac ccaggtgcgg cccagctgcg gctgcacggc cactgtcatc ggcaagtggt
      781 ccatcgcccc tggcgaaagc accgacctgg aagccacctt cgaccccaag gggctcaagg
      841 gcgccgtccg caaatccatc gaagtgattt ccaacgaccc gaaggccatg gccacgagcc
      901 tgaccctgga ggcggaggtg gtgcaggaga tcatgccctc cgtggaatcc atctacttcc
      961 acatggcgcc caggtccgcc accacccgga gcaccctccg ctacgccagc ggcaacggcg
     1021 aacccgtgca gctcgtggac gtgaaggctc ccggcgcccc cttcctggcc ttcgcccacc
     1081 gccaggacgg caaggacctg gtgctggagg tggccttcga cggccggaag gtgcctgcgg
     1141 ggcggttccg cggcgtggag caggccacgg tgcgcttctc caatccccgc atgaaccagc
     1201 tgcccctgaa catccagtgg gagctgaaac cctcgatcca gaccaccccg tcggaactgg
     1261 tcttccagga tgcccccggg aaggagctgc gccagaacct caccctcaag caggccgacg
     1321 gccgcgcctt ccgcatcacc ggaacccgct gctccctgag cggggtccgc gtggagggcc
     1381 tgggccagaa ggcggcctcg caggacatca ccgtggtgct gccggcctcc ctgaaggccg
     1441 ggcgctacag cgagatcctg tccctgaaca ccgatgatcc cgaccagccg gaattgacga
     1501 tccgcctggc cgccatcttg aagtagccac aaaccgtcaa ggcccttttc atttgtcctt
     1561 cgctccgccc ggagcgggat agcctggagg gatgccggaa tcccgcgctt cccacctcgt
     1621 cgccgtcatc tccctggccg ccaccgccgc catttggggg ggtggcttcc ccgcgaccaa
     1681 gtactgcctg caggcggggc tgtccgtggg ggccctgctc accatccggt tcgccatcgg
     1741 cgcggcgggc ctgggtctgc tgatgctgct gctccgggtg cccatccggc gccgggatgc
     1801 cctggatggc ctctggctgg ggctggtgct ggccaccctc ttctggctcc agaccgatgg
     1861 cctgcgcttc accaccacct cgaagtcggg cttcatcacg gggctctacg tgatcttcac
     1921 gcccatggtg gccctgctgg cgggggatcg cctgcggccc tcgcacgggg cgggcgccct
     1981 ggtggccctg ctgggactgg ccctgctggt ccgcgagccc ggcgcagcct ggggcggctg
     2041 gaaccgcggc gattccgaga ccttcctggc ggcggtgctc tgcggcttcc acatcgtgat
     2101 gacggcccac ttctcccggc ggtcttccgg ctgggtgctg gccttcatgc aggtggccgt
     2161 cacgggcctc atctccctgg ccatcaccct cgccctgccg gcgccccatg ggttccaggg
     2221 cgccggagcg gccctctccc gggccggcac ctgggtctcc ctgggcttca tgggcctgct
     2281 ggccaccacc ctggccttct acgtgcagag caccatgcag gcccggctgg gcgccacgga
     2341 aagcgccatc atcttcagcc tggaacccgt gtggacggcc gccatcgccg tcagcggcgt
     2401 ggtcccgggc atccgcgagc acatgggccc cgcccagctc gccggcggag ccctgatcct
     2461 cgcggccacc ttcgtggcgg agctgggccc gaggctgctg aagcggctcc agcgcccgga
     2521 gccggaagag gccatcggct agagactgtc ttcaggcctt gcggtccagg atcaccaggg
     2581 tcacatcatc cacgaagggc gcggggtggt tgaaggcgcg ggcctgggcg atcaccgccc
     2641 ccgccgcctc gtcggcctcg gcgggcagct cggcgcagat gcggcgcagg ccggcttctt
     2701 cgagcatggc gcggtcgccg cgctccactt ccaccaggcc atccgtgtag agcaccaggc
     2761 ggtcctccgg caggaactcc gcttcatgct ccacgaaggg gagctgggta tcgaggccca
     2821 gcatgaagcc cttgccccgc agcacttcgg aacgctggag cccgccctgg gagccccgca
     2881 cgatgcggag cggcgcgcag tggccggcca ccac
//
LOCUS       DASUDT010000066         5076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1417304, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000066 DASUDT010000000
VERSION     DASUDT010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417304"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1210
                     /locus_tag="VFV26_01410"
     CDS             62..1210
                     /locus_tag="VFV26_01410"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4844842.1"
                     /translation="MDKKILLVDDEANVLQGYHRVLNRTLALELAQGGTEALDLMERQ
                     GPFAVVVADMQMPGMTGLEFLARVKARYPDTTRLMLTGNSDQKTAMDAVNHGQVFRFL
                     TKPCPADELELAIRAGLRQHQLVMAEKELLEQTLTGAINLVSELLAGVDPLSFTRSQL
                     VRSQGARIARRLGCEDAWEVEVAALLAPIGRITLTAGVLQAAGNRPGAASLLASLPEV
                     GARLLDPIPRMQGVARIIRYQGKGFDGSGLPVDDIQGEAIPLGSRILKVLWDFSELAQ
                     TRKSRAVALEELRLRPRAYDPRVLSALGESLASPPPARATATVRVGDLQVGMCLAGEV
                     LTSDGSLVLPTGLHLGPGHLELLSVIAKRMDLQEFIPILLPTEESHET"
     gene            1200..2348
                     /locus_tag="VFV26_01415"
     CDS             1200..2348
                     /locus_tag="VFV26_01415"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4844843.1"
                     /translation="MKPRILLVDDEENLLQGYTRVLRGKFAVDTALGGEPALQAMADR
                     GPYAVVVSDMRMPGMDGVTFLAKAMRLFPDTVRIMLTGNADQGTAMEAVNQGEVFRFL
                     TKPCEVEQLARTLEHAVRQHQLITAEKSLVEDTLKGAIRMLVELLSCLDPISFGRAQA
                     MAAHAEAIGHEMGMENPWVLGIASILSQIGILTVPEGVAIKLHTGAFLNSHERELANR
                     IPEIGADLIRNIPRLEEVAEAVLYMNKNFNGTGFPEDGRKEEAIPIGGRILRVVWDFE
                     RLLSKFGNPLATVRDMEGRTSWYDLDVLRAFTRCLMAQEVETQIAPAQQIGLHELRTG
                     HVLLAGIETMEGMLVIPESTTIGMAHLQKLRNFARLSGIREPILVAGG"
     gene            complement(2491..2877)
                     /locus_tag="VFV26_01420"
     CDS             complement(2491..2877)
                     /locus_tag="VFV26_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844844.1"
                     /translation="MARIAVVDDSKLARAFAAAALSKTGHRVILIEPKSLQLTLGELV
                     KWAPDLILLDCSMPAFQGPSLVRACFELPGLSLVKVIILTAFQDKAIAQRMTKLGVDR
                     VLYKPISPRDLSEAVEEAVARPPRCE"
     gene            2967..4361
                     /locus_tag="VFV26_01425"
     CDS             2967..4361
                     /locus_tag="VFV26_01425"
                     /inference="COORDINATES: protein motif:HMM:NF021021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA Peptidase M64"
                     /protein_id="HEX4844845.1"
                     /translation="MLSHAFRSLFLLLATLACLAAPPRTLRVDYGHTGDATAERFGVD
                     RVVLEPLPWPGDPAKALDSSNLGKYCFEVADKATGRLLYSRGFASIYGEWETTDEAKS
                     ISRTFSESLRFPQPEAPVRIQVKKRDAVNAFRTLWTFDLDPKDPLMEQAPAPEAGGLI
                     ALQKAGDPADKVDFLILGDGYTAAERGKFEAQARKVMDLLFQQSPFKEHRSAFNVWAL
                     CPPSKESGISRPSTGVHKRTPLGTTYDAFGSERYVLTFDNRAWRDIAAQAPYEFVEIL
                     TNSETYGGGGIHNLYSTASAGNSTIGYLFVHEFGHHFAGLADEYYTSDVAVTNSPTRP
                     EPWEPNATADPKNPKWKALLTPGVPLPTPWKKAEFEAHSHAYQKERKAIRAANRPESE
                     MDALFAREKVFETKLLGTDVHSGKVGAFEGANYEAKGYYRSQEDCLMFTRNDAGFCVA
                     CRTAIEKVIRQYAK"
     gene            complement(4362..>5076)
                     /locus_tag="VFV26_01430"
     CDS             complement(4362..>5076)
                     /locus_tag="VFV26_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX4844846.1"
                     /translation="TVARDERVLVTVLTKKLAEQLTAYYQELGIKAEYLHSEIDTLER
                     VELLKNLRRGVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRNTRSLIQTIGRAA
                     RHVNGRAILYADVMTGSMKQAMGETERRRNKQLAHNAEHGITPETVKRNLDDVMGEAL
                     AREFINVTKEERAAEEPLLYLEDKAFEREVAKLEKRMKDLASQMKFEDAAELRDRILR
                     ARRERLLDVTGVPAAGPGI"
BASE COUNT          939 a         1699 c         1538 g          900 t
ORIGIN      
        1 gggcgacgcg agaactggga gttactggtg aatggggccg tgtccggctg agggggatgt
       61 catggacaaa aaaattctac tggtcgatga cgaggccaat gtcctccagg ggtatcaccg
      121 ggttctgaat cggaccttgg ccctggaatt ggcccagggc ggcaccgagg cccttgattt
      181 aatggagcgg caggggccat tcgcggtcgt ggtggcagac atgcaaatgc ctggcatgac
      241 cggattggag ttcttggctc gagtgaaggc ccgctatccc gacaccactc ggcttatgct
      301 cacagggaac tcggaccaga aaaccgccat ggatgccgtg aatcacggcc aggtgttccg
      361 tttcctcacc aagccatgcc cagcagatga gcttgagctg gccatcaggg caggactccg
      421 gcagcaccag ctggtgatgg ccgaaaagga gctgctggaa cagacactaa cgggggccat
      481 caacctcgtc tcagagctgc tggcaggcgt ggatcccctc tcattcaccc gcagccagct
      541 ggtgcgctcc cagggggcga gaatcgcccg gagattgggc tgcgaggatg cctgggaggt
      601 cgaagtggcg gccctgctgg ctcccattgg gcggataacg ctgaccgccg gcgtcctcca
      661 ggccgccggc aaccggccgg gtgccgcatc cctcctggcc tcccttcctg aagttggggc
      721 ccggctgctg gaccccattc cccggatgca gggggtggct cggatcattc gctaccaggg
      781 caaaggcttc gacggctccg gccttcccgt agatgacatc caaggcgagg ccattcccct
      841 cggttcccgg atcctcaagg tcctctggga tttttcggaa ctggcgcaaa cacggaagag
      901 ccgggcggtg gccctggagg agctgcggct ccgccccagg gcctacgatc caagggtgct
      961 gtcggccctc ggggagtccc tcgcctctcc gcctccggca cgggccacgg ccactgtcag
     1021 agttggggat ctgcaggtcg gcatgtgctt ggccggggaa gttctcacat cggacgggag
     1081 cctcgtattg cccacgggac tgcacctggg accgggtcat ctggagctat tgtcggttat
     1141 cgccaaacgt atggatcttc aggagtttat cccaatcctg ctccccaccg aggaatcaca
     1201 tgaaacctag gattctgctg gtggatgatg aggagaacct cctgcagggc tacacgcggg
     1261 tactgagggg caaattcgcg gtggacacgg ccctcggagg cgagcccgct ctgcaggcca
     1321 tggccgaccg tggtccttac gcggtggtgg tctccgacat gcggatgccc ggcatggatg
     1381 gtgtcacttt cctcgccaag gcgatgaggc ttttcccaga taccgtccgc atcatgctca
     1441 caggcaacgc ggaccagggc actgcgatgg aggccgtgaa ccagggtgag gtattccgtt
     1501 tcctcaccaa gccctgcgag gtggagcagc tggcacgcac actagagcac gccgtccgcc
     1561 agcatcagct catcacggcc gaaaagagtc tggttgagga caccctcaag ggcgccatcc
     1621 gcatgctggt ggagctgctt tcctgccttg atcccatctc cttcggacgg gcccaggcca
     1681 tggccgccca cgcagaagcc atcggccatg agatgggcat ggaaaacccg tgggttctgg
     1741 gcatcgcgtc catcctttcc cagatcggca tcctcaccgt gcccgagggc gttgccatca
     1801 agctccacac aggggccttc ctcaacagcc atgagcggga actcgctaac cgcatccccg
     1861 agataggggc cgacctcatc cggaacatcc cacgcctcga ggaggtcgcc gaggcagtgc
     1921 tctacatgaa caagaacttc aatggcaccg gatttccgga ggatgggcgc aaagaggagg
     1981 ccattcccat cggcggacgc attctccggg tggtctggga tttcgagcga ctcctctcca
     2041 agttcgggaa ccccctcgcc acagtgaggg acatggaagg gcggaccagc tggtacgacc
     2101 tggatgtact tcgcgccttc acccggtgcc tgatggccca agaggtggag actcagatcg
     2161 cacccgccca gcagattggc ctccacgaac tgcgcacggg ccatgttctt ctggcgggca
     2221 tcgaaaccat ggaaggcatg ctggtaatcc ctgaaagcac cacgattggc atggcccacc
     2281 ttcagaagct acgaaatttc gcccgcctct caggtattcg tgaacccatt ctcgtggcgg
     2341 gggggtagat cacaacacat cagatccttc gtaaccagaa tacctgtcgg ccagcaggcc
     2401 tggaacgcga gtcgaagcgc agcgagcact gcacccaacg gaggctccgg ctctgcaagc
     2461 cgaagatgag ggtgcgacac actcattctc tcattcacat cttggtggcc gggccaccgc
     2521 ctcctccaca gcctctgaaa gatccctggg ggaaatgggc ttgtacaaaa cccggtccac
     2581 gcccagttta gtcatccgct gagcaatggc cttgtcttga aaggcagtga ggatgatcac
     2641 cttgaccagg ctgaggccgg ggagttcgaa gcaggcccgg actaggcttg gcccttgaaa
     2701 ggcaggcatt gagcagtcca gcagaatcaa atccggggcc catttcacca gctcacccag
     2761 ggtgagttga agtgatttcg gttcaatcag gatgaccctg tgcccagtct tgctgagagc
     2821 agccgctgcg aaggccctgg ccagcttgct gtcatcaacc actgcgatgc gcgccaccag
     2881 ccctccaggt ttcgaagtat tatcggccaa ttcgccgccg gggttgcctc ccgcactcca
     2941 ggctttccta agttcagagg tatctcatgc tttctcacgc atttcgctct ctgtttcttc
     3001 tcctggccac ccttgcctgc ctggccgccc cgccccgcac cctgcgggtg gactacggcc
     3061 acacggggga cgccacggcc gagcgcttcg gggtggaccg ggtggtgctg gagcccctgc
     3121 cctggcccgg cgatcccgcc aaggccctgg acagcagcaa cctggggaag tactgcttcg
     3181 aggtggccga caaggccacg ggcaggctgc tctactcccg cggcttcgcc agcatctacg
     3241 gcgaatggga gaccacggac gaggccaagt ccatcagccg caccttctcc gaatccctgc
     3301 gcttccccca gccggaagcg cccgtgcgca tccaggtgaa gaagcgcgac gccgtcaacg
     3361 ccttcaggac cctctggacc ttcgacctcg atccgaagga tcccctcatg gagcaggctc
     3421 ccgcccccga ggccggcggc ctcatcgccc tccagaaagc gggtgatccc gcagacaagg
     3481 tggacttcct catcctgggc gatggctaca ccgccgccga gcggggcaag ttcgaggccc
     3541 aggcccggaa ggtgatggac ctgctcttcc agcagagccc cttcaaggag caccgcagcg
     3601 ccttcaacgt ctgggccctc tgcccgccct cgaaggagag cggcatctcc cgcccctcca
     3661 ccggcgtcca caagcgcacg ccgctgggca ccacctacga tgccttcggc agcgagcgct
     3721 acgtgctcac cttcgacaac cgcgcctggc gcgatatcgc cgcccaggcg ccctacgagt
     3781 tcgtggagat cctcaccaac tccgaaacct acggcggcgg gggcatccac aacctctaca
     3841 gcaccgcctc cgcgggcaac agcaccatcg gctacctctt cgtccacgaa ttcgggcatc
     3901 acttcgcggg cttggccgac gagtactaca cctccgatgt ggctgtgacc aacagcccca
     3961 cgcgtcccga gccctgggaa cccaacgcca cggcggatcc caagaacccc aagtggaagg
     4021 ccctgctgac gcccggcgtg cccctgccca ccccctggaa gaaggccgag ttcgaagccc
     4081 acagccacgc ctaccagaag gagcgcaagg ccatccgcgc cgccaaccgg cccgagtccg
     4141 agatggacgc cctcttcgcc cgggagaagg tcttcgagac gaagctcctg ggcaccgatg
     4201 tccacagcgg gaaggtgggg gccttcgagg gcgccaacta cgaggccaag ggctactacc
     4261 gcagccagga ggactgcctc atgttcaccc ggaacgatgc gggcttctgc gtcgcctgca
     4321 ggaccgccat cgagaaggtg atccggcagt acgcgaagta atcagattcc aggccccgcc
     4381 gccggtacac ctgtcacatc caacagccgt tcgcgccggg cacgcaggat cctgtcgcgc
     4441 agttccgccg catcctcaaa cttcatctgg gaggccaggt ccttcatgcg cttttcgagc
     4501 ttggccactt cgcgttcgaa ggccttgtcc tccaggtaga gcaggggttc ctcggcggcc
     4561 cgctcttcct tcgtcacgtt gatgaactcc cgcgccaggg cctcgcccat gacatcgtcc
     4621 aggttgcgct tcacggtctc cggcgtgatg ccatgctcag cgttgtgggc cagctgcttg
     4681 ttgcggcgcc gctcggtctc acccatggcc tgcttcatgg agccggtcat cacgtcggcg
     4741 tagaggatgg cccggccgtt cacgtggcgg gccgcgcggc cgatggtctg gatgaggctg
     4801 cgggtgttgc ggagaaagcc ctccttgtcc gcgtccagga tggccaccag gctcacttcc
     4861 ggcaggtcca ggccctcccg cagcaggttg atgcccacca gcacgtcgaa cacgccccgg
     4921 cggaggttct tcagcagctc cacccgctcc agggtgtcga tctcgctgtg caggtactcg
     4981 gccttgatgc ccagctcctg gtagtaggcc gtgagctgct ccgccagctt cttggtgagc
     5041 accgtcacca gcacccgctc gtcccgggcc acggtc
//
LOCUS       DASUDT010000067         4113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_842993, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000067 DASUDT010000000
VERSION     DASUDT010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_842993"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VFV26_01435"
     CDS             <1..224
                     /locus_tag="VFV26_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844847.1"
                     /translation="LDLNLGYGFKLAGAKQVRLMLDITNLFNSQSAVALDQRYNFSGL
                     DVGQTNTYFKSPTAFQAPRSVRFGVRFSF"
     gene            complement(279..563)
                     /gene="gatC"
                     /locus_tag="VFV26_01440"
     CDS             complement(279..563)
                     /gene="gatC"
                     /locus_tag="VFV26_01440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX4844848.1"
                     /translation="MDVTREDVLRCAALAHLSLQEDEVEPMREAMARMLSHAASLDDL
                     ALDQVEPMLAGLDRPLPRREDESRDTFTQAQALANAPEQDRGHFVVPKVL"
     gene            complement(565..1587)
                     /gene="tsaD"
                     /locus_tag="VFV26_01445"
     CDS             complement(565..1587)
                     /gene="tsaD"
                     /locus_tag="VFV26_01445"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX4844849.1"
                     /translation="MLVLGLESSCDDCSAAVVEETAAGPVLRSLVRESQDAIHGPFGG
                     VVPELAAREHLLQARAVMAGALAQAGIGLKGLDRIAVTRGPGLVGSLLATFSASKAVA
                     WREGLPWVGVHHLLGHLNAARFAAPDLPFPALVLLVSGGHTHLYLARDWTSLQLLQKT
                     RDDAAGEAFDKTARMLNLGYPGGPLVDACSQAAPRAAEPFTPPKFRDGKASWSFSGLK
                     TGVKLRVERTPHLAAAGASDPEVQGLCRSLQEAISAWLLKPIPALAREHGARSLVISG
                     GVACNSKLRADAAVLARREALVLAIPEPRLCTDNGAMIAAAGALLPVDAEPWIQNADA
                     DLKLGA"
     gene            1612..3882
                     /gene="priA"
                     /locus_tag="VFV26_01450"
     CDS             1612..3882
                     /gene="priA"
                     /locus_tag="VFV26_01450"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX4844850.1"
                     /translation="MNLVPTRIQLNRPLPPLTYLAPEGLPAGVRVRVRVRNSLAVGLV
                     LGPDPAPPAAKLRPVDAVIDPFPLLPPKLRELQTFAARYYGCLEAHLLPLSLPQALLP
                     HWEAGEDGQPLSFHRDRGAWQVLADLGEAWHRDPSILPTLLHRTALRGAGFTEVRLTG
                     APHPPRVTPSQAKVLLALEDAGGALMEPELLEAAGVGASVLGTLEKRGLVARMKRVDL
                     LGQRREAGVDRTVILNEEQRTALEAVVPGAFGVHLLHGVTGSGKTEVYLALAERVLAA
                     GRRVLWLVPEIGLTARLLDRLEARFPGRVAVGHAGLNAGEKHGDVVRLLFNGADLFVG
                     VRNAVLAPLRDIGLIVVDEEHEGSYKSEEHPRIHARDLAIKRAQIEGCPIVLGSATPS
                     LESWQAAQSGRYRLLQLKQRPAGITLPTVEIADLRDAYRQLRRKVILAPPLMQALSET
                     LARREQALLLLNRRGYENFWMCRACGKTLGCPHCAISLTYHRGDFRLRCHLCGHETVP
                     PEACPDCGADHLRGVGEGTEQVEEHLNQLFPTARILRLDRDTTRRRGSFEAGLLAAES
                     GEVDILVGTQMLAKGHTFPKLTLVGVLNADQGLKVADFRASERTFQLLTQVAGRAGRA
                     ELAGRVILQTYSPEHPAITFALAQDFEGFAASELPFREGLGYPPFTALSLYRAEADTL
                     QEAGGALDHFRQRLSVPGLRVLGPLEAPVPRIRDRWRMHLLLKGGRGALGEVLNRHPL
                     DPAGPISLDRDPMQFG"
BASE COUNT          589 a         1440 c         1459 g          625 t
ORIGIN      
        1 gcctggacct caacctgggt tatggattca agctggcggg cgcgaagcag gtgcgcctga
       61 tgctcgacat caccaacctc ttcaacagcc agagcgccgt ggcgctcgac cagcgctaca
      121 acttcagcgg cttggatgtg gggcagacga atacctactt caaatccccc acggccttcc
      181 aggccccccg gtccgtccgc ttcggggtgc gcttcagctt ctgatggcag cggggatcca
      241 gacaggcggc tcctccggga gccgcttcgt ttgaggctct acagcacctt gggcacgacg
      301 aagtgccccc ggtcctgctc cggggcgttg gccagggcct gggcctgggt gaacgtgtcg
      361 cgggattcat cctcccggcg gggcagggga cggtccaggc ccgcgagcat gggctccacc
      421 tggtccaggg cgaggtcgtc caggctggcc gcatgggaca gcatccgggc catggcctcg
      481 cgcatgggct cgacctcgtc ctcctgcagg ctcaggtggg ccagggcggc gcagcgcagc
      541 acatcctcac gggtcacgtc catgtcaggc tcccagcttg aggtccgcgt cggcgttctg
      601 gatccagggt tcggcatcca cgggcagcag ggcgcccgcc gcggcgatca tggcgccgtt
      661 gtccgtgcag aggcgcggct cggggatggc gaggaccagg gcctcccgcc gggcgaggac
      721 ggcggcatcg gcccgcagct tcgagttgca ggccacgccg ccgctgatga ccaggctgcg
      781 ggcgccgtgc tcgcgggcga gggcgggaat gggcttcagc agccaggcgc tgatggcctc
      841 ctgaaggctg cggcagaggc cctgcacctc gggatcggaa gcgcctgcgg cggccaggtg
      901 gggcgtccgc tccacgcgga gcttcacgcc ggtcttcagg cccgagaagc tccaggaggc
      961 cttgccgtcg cggaatttcg ggggcgtgaa gggctccgcc gcccggggag cggcctggga
     1021 gcaggcatcc accaggggcc cgccggggta gcccaggttc agcatgcggg cggtcttgtc
     1081 gaaggcctcg ccggcggcat cgtcccgcgt cttctggagc agctggagcg aggtccagtc
     1141 ccgcgccagg tacaggtgcg tgtggccgcc ggacaccagc agcaccaggg cggggaaggg
     1201 caggtccggc gcggcgaagc gggccgcgtt gaggtgcccc agcagatggt ggacgcccac
     1261 ccagggcagg ccctcgcgcc aggccacggc cttgctggcg ctgaaggtgg ccagcaggct
     1321 gcccacgagg ccggggccgc gggtgacggc gatgcggtcg aggcccttga ggccgatccc
     1381 ggcctgcgcc agggcgccgg ccatcacggc gcgcgcctgc agcaggtgct cgcgcgcggc
     1441 cagctccggc accacgccgc cgaaggggcc gtggatggcg tcctggctct cccgcaccag
     1501 ggagcgcagc acggggccag ccgccgtctc ctccaccacg gcggcggagc agtcgtcgca
     1561 ggaggattcg aggcccagga ccagcatctg ccaagtgtat cctggcctcc aatgaacctc
     1621 gtccccaccc gcatccagct gaaccgcccg ctgccgcccc tcacctacct ggcgccggag
     1681 ggactgcccg caggtgtgcg ggtgcgcgtg cgggtgcgga acagcctggc ggtggggctg
     1741 gtcctggggc ccgatcccgc gccgccggcg gcgaagctgc ggcctgtgga tgcggtcatc
     1801 gatccctttc ccctgctgcc acccaagctg cgggagctgc agaccttcgc cgcccgctac
     1861 tacggctgcc tggaggccca cctgctgccc ctgagcctgc cccaggccct gctgccgcac
     1921 tgggaggccg gcgaagatgg acagccactg tccttccatc gggatcgcgg tgcctggcag
     1981 gtgctcgccg atctgggtga agcctggcac cgggacccgt ccatcctgcc caccctgctg
     2041 caccggacgg ccctgcgcgg tgccggtttc accgaagtac gcctcacggg ggcaccgcac
     2101 ccgccccggg tgacgccctc ccaggccaag gtcctgcttg cgctggaaga tgccgggggc
     2161 gccctcatgg aacccgagct gctggaggcc gcgggcgtgg gcgcctcggt gctgggcacc
     2221 ctggagaagc ggggcctcgt ggcccgcatg aagcgggtgg atctgctggg ccagcggcgc
     2281 gaggcgggtg tggaccggac cgtcatcctg aacgaggagc agcggacggc cctggaggcg
     2341 gtggttccgg gggccttcgg cgtccatctg ctccatggcg tcacgggatc gggcaagacc
     2401 gaggtctacc tggccctggc ggagcgtgtg ctggcggcgg gccgccgcgt gctgtggctg
     2461 gtgccggaga tcggcctcac ggcgaggttg ctggaccggc tggaggcccg cttccccggc
     2521 cgggtcgccg tgggccacgc ggggctcaat gccggcgaga agcacggcga cgtggtgcgc
     2581 ctgctcttca acggggccga cctcttcgtg ggggtccgga acgccgtgct ggcgcccctg
     2641 cgcgacatcg ggctcatcgt cgtcgatgaa gaacacgagg gatcctacaa gtccgaggag
     2701 cacccccgca tccacgcccg ggatctggcc atcaagcggg cccagatcga gggctgcccc
     2761 atcgtgctgg gcagcgccac acccagcctg gaaagctggc aggcggcgca gagcggccgc
     2821 taccggctgc tccagctgaa gcagcggccc gcgggcatca ccctgcccac cgtggagatc
     2881 gccgacctgc gggatgccta ccgtcagctt cggcggaagg tgatcctggc gccgcccctg
     2941 atgcaggccc tgtcggagac gttggcgcgg cgtgagcagg cgctgctgct cctgaaccgc
     3001 cggggctacg agaacttctg gatgtgccgg gcctgcggga agacgctggg ctgcccgcac
     3061 tgcgccattt cactcaccta ccaccggggc gacttccgcc tgcgctgcca cctctgcggc
     3121 cacgagactg tgccgccgga ggcctgcccc gattgcggcg ccgaccacct gcgcggcgtg
     3181 ggcgagggga ccgaacaggt ggaagagcac ctgaaccagc tctttccaac agcccgcata
     3241 ctccggttgg accgcgacac cacgcgccgc cggggctcgt ttgaagccgg actcctggcc
     3301 gccgagtccg gcgaggtgga catcctggtg ggcacccaga tgctggccaa gggccacact
     3361 ttcccgaagc tcacgctggt gggtgtcctc aatgcggacc agggcctgaa ggtggccgat
     3421 ttccgggcct cggaacgcac cttccagctg ctcacccagg tggccggccg cgccggccgg
     3481 gccgagctgg cgggccgggt gatcctccag acctattcac cggagcaccc cgccatcacc
     3541 tttgccctgg cccaggattt cgaaggcttc gccgcctcgg agctgccctt ccgcgagggg
     3601 ctgggctacc cgcccttcac ggcgctctcg ctctaccgcg ctgaggccga caccctgcag
     3661 gaagccgggg gggccctgga ccatttccgg cagcggttgt cggttccggg gctgcgggtg
     3721 ctcggccccc tggaggcccc ggtgccgagg atccgggacc gctggcgcat gcacctgctg
     3781 ctcaagggcg gccggggcgc cctgggcgaa gtgctgaacc gccaccccct ggatcccgcg
     3841 ggccccatca gcctggaccg ggatcccatg caattcgggt aacgtataaa aagtagtcat
     3901 ttataatgga aatcggaacc gcacctcctc gccttgatta atcatgtgtt gaaagtagaa
     3961 ttgttataaa tcattacgat tccccacgcg cctgtccgac ccttttcctg aaccgaggtg
     4021 agcatgcact ccctgcgtcg cggctccggc tacacaatga tcgaacttct ggtggtgctg
     4081 gccattgtcg gcatcctcgc ctacgccggc gtg
//
LOCUS       DASUDT010000068         2494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1947353, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000068 DASUDT010000000
VERSION     DASUDT010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1947353"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1400)
                     /gene="fabF"
                     /locus_tag="VFV26_01455"
     CDS             complement(147..1400)
                     /gene="fabF"
                     /locus_tag="VFV26_01455"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX4844851.1"
                     /translation="MTRTVQRRRVVITGMGTVNPCGLTVPETWNNLLAGRSGIGTIDR
                     FDVTDFACKIAGQVKGFNPDLFIDKKEQKKMDIFIHYALGAAHEAWVDAGFDQIELTK
                     AEREVFGTYIGSGIGGLSTIWDEANGYRGPRRTSPFFIPSLIVNLASGQASIKYGLQG
                     PNSAVATACATGAHAIGDAARLIAFGYADRMMAGGSDSVVNQLGVGGFAAMRALSTRN
                     DEPERASRPFDVDRDGFVMGEGAGIVILEEYELAKARGAKIYAEVAGYGMSGDANHIT
                     TPAPEGEGGQRVMRAALKDADIAPEQVGYVNMHGTSTPVGDKLECMAIHKVFGDHSKT
                     IKVSSSKSMHGHLLGAAGGLETIVAALAVQTGKIPPTINVDHQDPECDLDVTANVAGT
                     LDAEYVMNNGFGFGGTNGCLVLRKV"
     gene            complement(1484..1723)
                     /gene="acpP"
                     /locus_tag="VFV26_01460"
     CDS             complement(1484..1723)
                     /gene="acpP"
                     /locus_tag="VFV26_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX4844852.1"
                     /translation="MADVRKKVIAIIAEQLAKPEDSISESSHFVDDLGADSLDTVEII
                     MAIEEAFSLEIPESEQEKIRTVGDAIAYIEKHAKA"
     gene            1822..>2494
                     /locus_tag="VFV26_01465"
     CDS             1822..>2494
                     /locus_tag="VFV26_01465"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX4844853.1"
                     /translation="MPRVRIHEEPEHGWPLGWAASLREFRTFLAVERGLSPHTASGYL
                     SDLSHLAVWACGRELPATDLSRDHLTAFLVAQQSEGKAPRSLARMSSSLRAFLAFLRM
                     EGGGGAGPEAVVKPPRPPRILPRTLGESQVEALLAAPDTATPLGVRDRAWLELLYASG
                     LRVSELADLPALSVFLDEGFLKVMGKGRKERLIPFGTGAERWIRAWLALRPGFKPRGG
                     ELFVGQ"
BASE COUNT          371 a          829 c          840 g          454 t
ORIGIN      
        1 gccttggcca tagatccaaa agcaaaccac caagacacca aggcaccaag aaaagaatag
       61 gcctttcttg gtgccttctc ggcatccgct ccgcggatgc gcgagacaaa gggaaatatg
      121 gtgtcttggt ggtgaattcg tttttcttag accttccgca gcaccaggca cccgttggtg
      181 ccgccgaagc cgaagccgtt gttcatgacg tattcggcat ccagcgtgcc cgccacattg
      241 gcggtcacgt ccaggtcgca ctcgggatcc tggtggtcca cgttgatggt gggggggatc
      301 ttcccggtct ggaccgccag cgcggccacg atggtctcca ggccgccggc ggcgcccagc
      361 aggtggccgt gcatggactt ggagctgctg accttgatcg tcttcgagtg gtcgccaaag
      421 accttgtgga tggccatgca ctccagcttg tcgcccacgg gcgtgctggt gccgtgcatg
      481 ttcacgtagc ccacctgctc aggcgcgatg tcggcgtcct tgagggccgc ccgcatgaca
      541 cgctggccgc cctcaccctc gggggcgggg gtggtgatgt ggttggcgtc gccgctcatg
      601 ccgtagccgg ccacctcagc gtagatcttc gccccgcggg ccttggccag ctcgtattcc
      661 tcgaggatga cgatgcccgc gccctcgccc atgacgaagc cgtcccggtc cacgtcgaag
      721 ggccgggagg cgcgctcggg ctcatcgttg cgggtgctga gggcgcgcat ggcggcgaag
      781 ccgcccacgc caagctggtt cacgacggaa tcgctgccgc cggccatcat gcggtccgcg
      841 tagccgaagg cgatgaggcg ggccgcatcg ccgatggcgt gggccccggt ggcgcaggcc
      901 gtggccaccg cgctgttggg gccctggagg ccgtacttga tgctggcctg gccgctggcc
      961 aggttcacga tgaggctggg gatgaagaag gggctggtgc ggcggggacc gcggtagcca
     1021 ttggcctcgt cccagatggt gctgaggccg ccgatgccgc tgccgatgta ggtcccgaag
     1081 acctcgcgct cggccttggt gagttcgatc tggtcgaagc ccgcatccac ccaggcctcg
     1141 tgggccgcgc ccagggcgta gtggatgaag atgtccatct tcttctgttc cttcttgtcg
     1201 atgaacagat ccgggttgaa gcccttcacc tgtcccgcga tcttgcaggc gaagtcggtg
     1261 acgtcgaagc ggtcgatggt gccgatgccg cttctccccg ccagcaggtt gttccaggtc
     1321 tcgggcacgg tgaggccgca gggattgacg gtccccatgc cggtgatgac gacgcggcgg
     1381 cgctggacgg tcctggtcat ggattcacct cgtgcaactg gcgtgaaaat gaacgtgccg
     1441 cagggccgat gggggcgctg cggcacgtca cgatcgcgat ggatcaggcc ttcgcgtgct
     1501 tctcgatgta ggcgatggcg tcgcccaccg tgcggatctt ctcctgctcg ctctcgggga
     1561 tctcgaggct gaaggcctct tcgatggcca tgatgatctc gacggtgtcg aggctgtcgg
     1621 caccgaggtc gtccacgaag tggctggatt cggaaatgga atcctcgggc ttggccagct
     1681 gctcggcaat aatcgcaata accttcttac gcacatcagc catcgtgggc tcctccaaac
     1741 gaacccggaa accgtaacac actctccacc ggattgccaa actccgggta ggttggctga
     1801 gtgcccatcc aggaatgtcc catgccgcgt gtgcgaattc atgaagaacc cgagcacggc
     1861 tggcctctcg ggtgggccgc cagcctgcgg gagttccgca ccttcctggc ggtggagcgg
     1921 gggctctccc cccacacggc ctcgggctac ctctcggacc tgagccatct ggccgtctgg
     1981 gcctgtggcc gggagctccc cgccacggac ctctcccggg accacctcac ggccttcctg
     2041 gtggcccagc aatccgaagg caaggccccc cgcagcctgg cgcggatgag ctccagcctc
     2101 cgtgccttcc tggccttcct gcgcatggag ggcggtggcg gcgcgggccc cgaggccgtc
     2161 gtcaagccgc cccggccgcc ccgcatcctg ccccgcaccc tgggcgaaag ccaggtggag
     2221 gccctgctgg cggcgccgga caccgccacg ccgctggggg tgcgggaccg cgcctggctg
     2281 gagctgctct acgcctcagg cctccgcgtc tccgaactgg cggacctccc cgccctgtcc
     2341 gtcttcctgg atgaagggtt cctcaaggtc atgggcaagg gccggaaaga gcgcctcatc
     2401 cccttcggca ccggcgccga gcggtggatc cgggcctggc tggccctgcg cccaggcttc
     2461 aagccccggg ggggcgagct gttcgtgggc cagc
//
LOCUS       DASUDT010000069         2979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1969671, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000069 DASUDT010000000
VERSION     DASUDT010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2979
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969671"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VFV26_01470"
     CDS             <1..652
                     /locus_tag="VFV26_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEX4844854.1"
                     /translation="LSQRAAKQQIRAAVVEATKRSWLRPNCVEALSGKNTGTNMDPFH
                     EHHPSIHFEEWDKPEVEISVMQKGGGCENVGAQYRLPDAALGAGRDIKGVRKCIIDAV
                     VKAQGQGCSPGILGVALGGDRVTSYEKSKELILRKLGTSNPDPKMDAFEKEIVNDLNT
                     LGIGPMGYGGNTTVLGVMAEEMYRHPASFYVSISYMCWSSRRGSITLKTNGEVSFD"
     gene            665..1243
                     /locus_tag="VFV26_01475"
     CDS             665..1243
                     /locus_tag="VFV26_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FumA C-terminus/TtdB family hydratase beta
                     subunit"
                     /protein_id="HEX4844855.1"
                     /translation="MIRLTTPITEDQIRQLKVGDEVLLNGRVVLSRDMGHKYMKEQKP
                     EWLKPILENMVIYHCGPVVKKNEDGTWSFVAAGPTTSIREEPYQADVIDTYKVRGVIG
                     KGGMGKKTSEGLQKTGAVYLHATGGAGSLLAERCKRVVDVKMLEEFGSPEAFWIIEVE
                     DFPLVVTMDSHGGSLHEIVAQQSQERAKVLTA"
     gene            1289..2119
                     /gene="prmC"
                     /locus_tag="VFV26_01480"
     CDS             1289..2119
                     /gene="prmC"
                     /locus_tag="VFV26_01480"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX4844856.1"
                     /translation="MGQTYRQLRLDLSAALAEFLDLSEAHAESVRWFEEGLDLSRSWM
                     AAHGGEQVPSSVRQQVGAWVRRRRTGEPWAYILGWALFRDRRFKVTRDTLIPRPETDL
                     LVEAALDVGKRLGVDRCVDVGTGSGIIAVSLALEAGWQVAASDVSAGALAVARENALA
                     LKAPVAFHEGSLLEAVPDPLGLVVANLPYVDPADEPGLQRELAFEPASALFAPDRGLA
                     LSTELLAQARTRKAPACLLEIGAGQGGELCRRAMGLGWGKAMVHQDFAGHDRVLIALG
                     "
     gene            2163..2837
                     /locus_tag="VFV26_01485"
     CDS             2163..2837
                     /locus_tag="VFV26_01485"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEX4844857.1"
                     /translation="MRKMLPIVLLLAGVGCSIPRRHDPSLVKKPAIPLVEEAPPSQPL
                     SDGSLWRDRPFVVDLRAFRINDLVTLRISESTNAISKADTTTSRDGSNKLTSPTLFGT
                     LATFGIGSGGDAARSTGTQNKFAGKGTTGRSATFTTVVTARVVKVIGNGNLIVEGFRD
                     IQLNNETQRLYVAGMVDPNRLDKDNSIASGQVAELRIGYGGQGVVDETLKPGFISRLL
                     NYIWPF"
BASE COUNT          526 a         1005 c         1007 g          441 t
ORIGIN      
        1 cctgagccag cgggcggcca agcagcagat ccgggcagcc gtggtcgagg ccaccaagcg
       61 ctcctggctg cgccccaact gcgtggaggc cctcagcggc aagaacaccg gcaccaacat
      121 ggatcccttt cacgagcacc acccctcgat ccacttcgag gaatgggaca agccggaggt
      181 ggagatctcc gtcatgcaga agggcggggg ctgcgagaac gtgggcgccc agtaccgcct
      241 gccggacgct gcgctgggcg cggggcgcga catcaagggc gtgcggaagt gcatcatcga
      301 tgctgtggtg aaggcccagg gccagggctg cagccccggc atcctcggcg tggccctcgg
      361 cggcgaccgc gtcaccagct atgagaaaag caaggagctg atcctccgca agctcggcac
      421 gtccaatccc gatcccaaga tggacgcctt cgagaaggag atcgtcaacg atctcaacac
      481 cctgggcatc ggtcccatgg gctacggcgg caacaccacg gtgctgggcg tcatggcgga
      541 ggagatgtac cgccacccgg ccagcttcta tgtgtccatc agctacatgt gctggagcag
      601 ccgccggggc tcgatcacgc tcaagaccaa cggcgaagtg tccttcgact gatacgaggc
      661 tcccatgatc cgtctcacca cccccatcac cgaagaccag atccgccagc tcaaggtggg
      721 cgatgaagtg ctgctcaacg gccgcgtcgt cctcagccgg gacatgggcc acaagtacat
      781 gaaggagcag aagcccgaat ggctgaagcc catcctcgag aacatggtca tctaccactg
      841 cggccccgtc gtgaagaaga acgaggacgg cacctggtcc ttcgtggccg ccgggcccac
      901 cacgtccatc cgcgaagagc cctaccaggc ggatgtcatc gacacctaca aggtgcgcgg
      961 cgtcatcggc aagggcggca tgggcaagaa gaccagcgaa ggcctccaga agaccggggc
     1021 cgtctacctc cacgccaccg gcggcgccgg cagcctgctg gccgagcgct gcaagcgcgt
     1081 ggtggacgtg aagatgctgg aggagttcgg cagccccgag gccttctgga tcatcgaggt
     1141 ggaggacttc cccctggtgg tcaccatgga cagccacggc ggcagcctcc acgagatcgt
     1201 ggcccagcag agccaggagc gcgccaaggt gctgacagcc tgaattccgg gttttcgggg
     1261 tccatccctc ccacggtagg ctggagggat gggccagacc taccgacagc tccgcctcga
     1321 cctgagcgcc gccctcgccg aattcctcga cctttccgag gcccacgcgg aaagcgtccg
     1381 ctggttcgag gaagggctgg acctttcccg gagctggatg gcagcccacg gcggcgagca
     1441 ggtgccttca agcgtccggc agcaggtggg ggcctgggtg cgccgccgcc gcacgggtga
     1501 gccctgggcc tacatcctag gctgggccct gttccgggac cgccgcttca aggtcacccg
     1561 tgacacgctg attccccgtc ccgagacgga cctgctggtg gaggcggccc tggatgtggg
     1621 gaagcggctg ggggtggacc gctgcgtgga tgtgggtacg ggcagcggca tcatcgccgt
     1681 gagcctggcc ctggaggccg gatggcaggt ggcggccagc gatgtgagtg cgggtgccct
     1741 ggccgtggcc cgcgagaacg ccttggccct gaaggccccg gtggccttcc acgagggaag
     1801 cctgctggag gctgtgcccg acccgctggg cctggtggtg gcgaatctgc cctatgtgga
     1861 tcccgcggat gaacccggcc tgcagcggga gctggccttc gagcccgcct cggcgctctt
     1921 cgccccggac cgtggcctgg ccctttccac cgagctgttg gcccaggccc gaacccggaa
     1981 ggccccggcc tgcctgctgg agatcggtgc gggccagggc ggcgagttgt gccgccgggc
     2041 catggggctt ggatggggca aagccatggt ccaccaggac ttcgcgggtc atgaccgggt
     2101 gctgatcgcc ctggggtgaa ccttggcacc ttcctcgccc ttccttggcg tggaggtgcg
     2161 tcatgcggaa aatgctgcct attgtcctgc tgttggcggg ggtcggctgc tccattcccc
     2221 ggcgccatga cccgagcctc gtcaagaagc cggccatccc cctggtggag gaggcccccc
     2281 cgagccagcc gctcagcgat ggcagcctgt ggcgggaccg gcccttcgtg gtggacctcc
     2341 gcgccttccg catcaacgat ctggtgacgc tgcggatcag cgaaagcacc aacgccatca
     2401 gcaaggcgga caccaccacc tcccgggacg gctcgaacaa gctgaccagc cccaccctgt
     2461 tcggcaccct ggccaccttc ggcatcggca gcgggggcga tgcagcccgc agcacgggca
     2521 cccagaacaa gttcgccggg aaggggacca ccggccgcag cgccaccttc accacagtgg
     2581 tcaccgcccg ggtggtgaag gtcatcggca acggcaatct catcgtcgaa gggttccggg
     2641 acatccagct gaacaacgag acccagcgcc tctatgtggc cggcatggtg gatccgaacc
     2701 gcctggacaa ggacaacagc atcgcctccg gccaggtggc ggaactgcgc atcggctacg
     2761 gcggccaggg cgtggtggac gagaccctga agccgggctt catcagccgc ctgctcaact
     2821 acatctggcc cttctgagga gatgaccatg cgcgtcgcag ccctgttcct ggcgaccctg
     2881 gccctcctgg gggccgagac ggcgaaggcc gacaagaagg tcgaatcccg cctgaaggag
     2941 gtggcccgcc tccagggcgt gcgcgccaac cagctgctg
//
LOCUS       DASUDT010000070         4264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_114027, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000070 DASUDT010000000
VERSION     DASUDT010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4264
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114027"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VFV26_01490"
     CDS             complement(<1..267)
                     /locus_tag="VFV26_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844858.1"
                     /translation="MNGVVISGPKRFLYGGLGSLLPTLYALAMGRDFENIFAHPSWAS
                     VLGWLVRTAALFAIGGLTVIFLKRNLKSISMIFLTGVVAPGIVRA"
     gene            complement(346..516)
                     /locus_tag="VFV26_01495"
     CDS             complement(346..516)
                     /locus_tag="VFV26_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844859.1"
                     /translation="MSFQTLITASAASLAALYFLRGALQDFRGGSRPGGSACGSCASG
                     GCPVARGARPAR"
     gene            complement(524..2695)
                     /gene="feoB"
                     /locus_tag="VFV26_01500"
     CDS             complement(524..2695)
                     /gene="feoB"
                     /locus_tag="VFV26_01500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEX4844860.1"
                     /translation="MTLTIALAGNPNCGKTTLFNALTGARHHVGNWPGVTVERRSGTF
                     EQDGSVLEVVDLPGTYSLSARSEDERVAAQFLASPEVDLVLNVLDASNLERNLYLSTQ
                     LLELGKPVAFVLNMVDDAENRGVRIDVPALELLLGGPVIPTVGNRDQGIPELKSLLAT
                     LARGESTRCRRITVDYGHDIEGELAKLQTEICRDERLEAAMPPRWLALQLLENNAEAK
                     KVVAESHAAEAIGQQLARSFAFLEPHLGADGATLVAERRYGFAHGLVKEVATAPDEKT
                     TPTARLDAVLTHRWLGIPIFLGILALVYSLSFILGKIPQDWIGEGFKALAGFAEARLP
                     AGELTSLLVDGVIPGVSAVIVFVPVIMILMGCIAFLEDTGYMARAAFIMDRLMHVMGL
                     HGKSFIPLIMGSGCNVPAIQAARTIESRQDRLITILVTPLVSCSARLQVFIVIAGTFF
                     APFKAALVIIAMHFLGLGLAVLMGRMLRSALFSGPSSPFVMELPPYRLPVMKATLIHM
                     WEKGSVFLTRAGTTIFAGATLIWFLSRYPGIANREWTAEYQLQRQAVAALNLPVAEAE
                     GRLKDLQLAHESRIVNTSLAARLGQKVEPLLRPILDPDHKRPEAWKDVIALTAGFVAK
                     EIVVSTMAVIHQASEEPKEGEQLSPLQVALRDGSGLSPLTALAFMIFTLIYTPCLGTI
                     AMIRREAGSWGWAGFTVAYGLVLGWGLAWATVAVGRALGFA"
     gene            complement(2695..2940)
                     /locus_tag="VFV26_01505"
     CDS             complement(2695..2940)
                     /locus_tag="VFV26_01505"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HEX4844861.1"
                     /translation="MTQNRPIPLSMLQPGDQGEVVEVQAHGQVRQRLLEMGFIRGAHL
                     RVEKLAPMGDPMELVIKGYHLSLRRDESSCILVYRVA"
     gene            3030..3599
                     /gene="pgsA"
                     /locus_tag="VFV26_01510"
     CDS             3030..3599
                     /gene="pgsA"
                     /locus_tag="VFV26_01510"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX4844862.1"
                     /translation="MTPSSPLTLPNALTLLRILAIPFFAIAVWYGHHWQAFILFAAAG
                     FTDLLDGLIARAFNQRSDLGAVLDPAADKLLMTTAFILMAWRTEGMAAAIPVWVSILA
                     ITRDLVISFYAFASVDRLSDSKFHPSLLGKLSTAMQLIAVSAGLLFNALGPRPWMEPF
                     LPEMYWAVAALVLASGIHYFMRATRPAAA"
     gene            3599..>4264
                     /locus_tag="VFV26_01515"
     CDS             3599..>4264
                     /locus_tag="VFV26_01515"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX4844863.1"
                     /translation="MDHRGRIPLRFALVAVGAALSLWLLRRALAPFFVAMVLAYLLGP
                     LVDRLARRIGRPWSVVATLSGFVAAAAGLLVVLLPWLAGQAERLATSLPRWKAALEAK
                     LLPWLQAHPVWRDRLSQGLEGLDSGLLLRGLRATGGGVLGCFLDLLALILVPLILYYL
                     LLEGPGLVATLRNLAPPRHRERLDRMAGAIHQRLGGYIRGQAAVAAVMALLQGLAFAI
                     LGVP"
BASE COUNT          634 a         1455 c         1492 g          683 t
ORIGIN      
        1 cgcgcggacg atgcccgggg ccaccacccc cgtcaggaag atcatggaga tgctcttcag
       61 gttccgcttg aggaagatga ccgtcagccc cccgatggcg aacagggccg cggtgcggac
      121 cagccatccg aggaccgagg cccagctggg gtgcgcgaag atgttctcga agtcgcgccc
      181 catggccagg gcgtagaggg tgggaaggag ggaacccagc cccccgtaca ggaaccgctt
      241 cggccccgag atcacgaccc cgttcatacg gctcccctgt ttctgatgct ggatgcgatc
      301 agaaaatagg ccttttttgc ctcaagggaa gggccaaatg ggagatcagc gcgccggacg
      361 cgcaccccgg gccaccggac atccgcccga agcgcaggat ccgcaggcgc tgcccccggg
      421 acggcttccg ccccggaagt cctggagggc tccccgcagg aagtagaggg ccgccagcga
      481 ggccgcggat gccgtgatca gagtctggaa gctcatggcc gcctcacgcg aaccccaggg
      541 cgcggcccac ggccaccgtc gcccaggcga gaccccagcc caggaccagg ccgtaggcca
      601 ccgtgaatcc ggcccagccc cagctgcccg cctcgcggcg gatcatggcg atggtgccca
      661 ggcagggcgt gtagatcagg gtgaagatca tgaaggccag ggccgtgagg gggctcaggc
      721 ccgacccgtc ccggagcgcc acctggagcg ggctgagctg ctcgccttcc ttgggctcct
      781 cgctggcctg gtggatcacg gccatggtgg agaccacgat ctccttggcg acgaagccgg
      841 ccgtaagcgc gatgacatcc ttccaggcct cgggccgctt gtggtccggg tcgaggatgg
      901 gccgcagcag gggctccacc ttctggccca gccgggcggc gaggctggtg ttgacgatgc
      961 ggctttcgtg ggccagctgc agatccttga ggcggccttc cgcctccgcc acgggcaggt
     1021 tcagcgcggc cacggcctgg cgctgcagct ggtactccgc cgtccactcg cggttggcga
     1081 tgccggggta gcgcgacagg aaccagatca gcgtggcgcc cgcgaagatg gtggtgccgg
     1141 cgcgggtgag gaagaccgag cccttctccc acatgtggat gagcgtggcc ttcatgaccg
     1201 gcaggcggta ggggggcagc tccatcacga agggggagct gggcccgctg aagagcgcgc
     1261 tgcggagcat gcggcccatg agcaccgcca ggccgaggcc caggaagtgc atggcgatga
     1321 tgaccagggc ggccttgaag ggggcgaaga aggtccccgc gatgacgatg aagacctgca
     1381 ggcgcgccga gcagctcacc aggggggtca cgaggatcgt gatgaggcgg tcctggcggc
     1441 tttcgatggt gcgggcggcc tggatggcgg gcacgttgca accgctgccc atgatgaggg
     1501 ggatgaagct cttcccgtgg aggcccatga cgtgcatgag gcggtccatg atgaaggccg
     1561 cccgggccat gtagcccgtg tcctccagga aggcgatgca gcccatgagg atcatgatca
     1621 cgggcacgaa gacgatcacc gcgctcacgc cggggatgac gccgtccacc agcaggctgg
     1681 tcagctcgcc cgcgggcagg cgggcctccg cgaagcccgc cagggccttg aagccctcgc
     1741 cgatccagtc ctgggggatc ttcccgagga tgaaggagag ggagtacacc agggccagga
     1801 tgcccaggaa gatggggatg ccgagccagc ggtgcgtgag aaccgcatcc agcctggcgg
     1861 tgggcgtcgt cttctcgtcc ggggccgtgg ccacctcctt caccaggccg tgggcgaagc
     1921 cgtagcggcg ctcggccacc agggtggcgc cgtcggcgcc caggtgcggc tccaggaagg
     1981 cgaagctcct ggccagctgc tggccgatgg cctcggcggc atggctttcc gccaccacct
     2041 tcttggcctc ggcgttgttc tccagcagct ggagggccag ccaccggggg ggcatggcgg
     2101 cttccaggcg ttcgtcgcgg cagatctccg tctggagctt ggccagctcg ccttcgatgt
     2161 catggccgta gtccacggtg atgcggcggc agcgggtgga ttcgccccgg gccagggtcg
     2221 cgagcagcga cttcagctcg ggaatgccct ggtcgcggtt gcccacggtg gggatcacgg
     2281 gaccgcccag caggagctcc agggccggga catcgatgcg gaccccgcgg ttctcggcat
     2341 cgtccaccat gttgaggacg aaggccacgg gcttgcccag ctccagcagc tgggtgctga
     2401 ggtagaggtt gcgctccaga ttcgaggcgt cgaggacgtt gaggaccagg tccacctcgg
     2461 gggaggccag gaactgcgcg gcgacgcgtt cgtcctcgct gcgggcggac agcgagtagg
     2521 tgccgggcag gtccaccact tccagcaccg agccatcctg ctcgaaggtg ccgctgcgcc
     2581 gctccacggt gacgccgggc cagttgccca catgatgccg cgcgccggtg agcgcgttga
     2641 agagggtggt cttcccgcag ttgggattgc ccgccagggc gatggtgagg gtcatcaggc
     2701 cacccggtag acgaggatgc aggagctctc gtcccgccgc agcgagaggt ggtagccctt
     2761 gatcacgagt tccatgggat cgcccatggg cgccagcttc tccacgcgca ggtgcgcgcc
     2821 gcggatgaag cccatttcca gcaggcgctg gcggacctgg ccatgggcct gcacctcgac
     2881 cacctccccc tgatcgccag gttggagcat gctcagggga attggtcgat tttgagtcat
     2941 agtctcaact ccgaaatcca gtgtagctca gcctcagagt cctacaaggt ccgggtcaaa
     3001 ggatgtgatc tccgtctaaa ctggagcaaa tgaccccctc cagccccctg accctgccca
     3061 acgcgctgac cctgctgcgg atcctcgcga tccccttttt cgccatcgcg gtctggtacg
     3121 ggcaccactg gcaggccttc atcctgtttg ccgcggccgg cttcaccgac ctgctggacg
     3181 gcctcatcgc ccgcgccttc aaccagcgct cggacctggg ggccgtgctg gatccggcgg
     3241 cggacaagct gctgatgacc acggccttca tcctcatggc ctggcgcacc gagggcatgg
     3301 ccgcggccat tcccgtgtgg gtgtcgatcc tggccatcac gcgggacctg gtgatctcgt
     3361 tctacgcctt cgcctccgtg gaccgcctga gcgacagcaa gttccatccg agcctcctcg
     3421 ggaagctcag cacggccatg cagctcatcg ccgtctccgc cggcctgctc ttcaacgccc
     3481 tgggaccccg gccctggatg gaacccttcc tgccggagat gtactgggcc gtggccgccc
     3541 tggtgctggc ctcgggcatc cactacttca tgcgcgccac ccggcccgct gcggcctgat
     3601 ggaccatcgg ggccggattc ccctgcgctt cgccctggtg gccgtgggtg cggcgctgtc
     3661 gctctggctc ctccggcggg ccctggcccc cttcttcgtg gccatggtcc tggcctacct
     3721 tctgggacct ctggtggatc gcctggcccg gcgcatcggc cgcccctgga gcgtggtggc
     3781 caccctcagc ggcttcgtgg ccgcggcggc cgggctgctg gtggtcctgc tgccctggct
     3841 ggcgggccag gccgaacgcc tcgcgacctc cctgccccgc tggaaggcgg cccttgaggc
     3901 gaaactgctg ccttggctcc aggcccatcc ggtctggcgg gatcgcctgt cgcaaggcct
     3961 ggaggggctg gattccggcc tgctgctccg gggcctgcgg gccacgggcg gcggggtgct
     4021 gggctgtttc ctggacctgc tggccctcat cctcgtgccc ctgatcctct actacctgct
     4081 gctggagggg cccggcctcg tggccaccct gaggaacctg gcgccccccc gccaccggga
     4141 acgcctcgac cgcatggcgg gcgccatcca ccagcggctg ggcggctaca tccggggcca
     4201 ggccgccgtg gcggccgtca tggccctgct ccagggactg gccttcgcca tcctcggcgt
     4261 gccc
//
LOCUS       DASUDT010000071         3606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_577939, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000071 DASUDT010000000
VERSION     DASUDT010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577939"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VFV26_01520"
     CDS             <1..423
                     /locus_tag="VFV26_01520"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX4844864.1"
                     /translation="ESFAEYTSALAMRAMKKKGQGTYEIIVKDWGEQAKKATQAASIP
                     TANFLHVARQGGDPEKFRYRQSLVYHKGAYLLACLHKELGEQKFMQFLRLYLDSFAWY
                     PPSFSQDVPDLLKKVTGRDYQAWMDKYFYGTEMPEWKP"
     gene            complement(451..1704)
                     /locus_tag="VFV26_01525"
     CDS             complement(451..1704)
                     /locus_tag="VFV26_01525"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEX4844865.1"
                     /translation="MSAADLSGPEGRPAPPPALPPEVAFCLELGRAFQAYGIPAHRFE
                     DALERVCRRLGLDGQFFGLPTAFFASLGQGGHHWTFIQRSPAGETNLEKLSDLQEATD
                     ALIDGHIDAAEARSRVRGILSAPDRWGPWLTVLCFGLGSAPAAMFLGGGWREMVLTAL
                     LGMLVGLAAVLLGRRAGLARLVHPVAGVLVGFLAVAAAWRFPQVSPQILTVAGLIVLV
                     PGLRLVVSMNELATGNLVAGTARLMDTAMTFLSLGFGVALGQRLTGPLLDRALLGTPL
                     PLPPWTVLPILLLAAAAFVVIFKARPRDLPWIFAACALAFYGTRHGSALLGPQFGVGL
                     GAFVLGLGSNLYTRLTRRPSVVTLLPGLMVLVPGGLGFKGLEFIIQKQLVVGLDTAFQ
                     ALFVAIALLTGLLLAHAAVQPRTAL"
     gene            1802..>3606
                     /locus_tag="VFV26_01530"
     CDS             1802..>3606
                     /locus_tag="VFV26_01530"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX4844866.1"
                     /translation="MAVHTTACPRNCYSTCAMRVTVEHGRITAIDPHEGNRATPEGPC
                     LKGLAYLDRTASPERILHPLRRTATGAFERVSWDAALDLITERLLTARREHGPQSVFH
                     YAGSGTKGLLNGCGMAFWRRFGGCTTTYGDLCWPAGLEATRLTFGDNRQSAPWDIAEA
                     RLIVMWGKNASETNLHQMRFVHQALAQGATLVVIDPRRTPTADRAHLLLQPRPGTDGA
                     LALGLAHLLIEAGRVDHAFIRDHVLGFEAYAALVKTWTPARTAEACGVPEAQIRALAE
                     LMGRIAPMSLCAGFGMQRYTNAGQAMRAIQALLPLTGNLGKPGAGWVYANLATQIFGP
                     VKDPLDFYPPERPDGVVRVSVSTARLGADMAAQQDPPLKVGWVERGNPACQNPETPAV
                     LAALRALDFLVVVDERLTDTAREAHLVLPSKSLFEQTDVIGAYWHAYLQLRQKVVEPP
                     GEVRPETEIYRALGQRLGMTPEDLAFLPAPGDAGVEAWLEARLAPHGITLDQLREGPV
                     LAPGAEPVAFADLRFTTPSGKVELVSEEASARWGVGPLPDHRPPVEGDPGGRYPLHLL
                     TPNTKNGIHSQFLPLQVIRQLMPGPSLEMGPEDALA"
BASE COUNT          584 a         1292 c         1295 g          435 t
ORIGIN      
        1 gaatccttcg ccgagtacac ctcggccctg gccatgcggg ccatgaagaa gaaggggcag
       61 ggaacctacg agatcatcgt gaaggactgg ggtgaacagg cgaagaaggc cacccaggcg
      121 gccagcatcc ccacggccaa cttcctgcat gtggcccgcc agggaggcga cccggaaaag
      181 ttccggtacc ggcagtcact ggtgtaccac aagggggcct atctgctggc ctgcctgcac
      241 aaggaactgg gggagcagaa gttcatgcag ttcctccgcc tctacctcga ttccttcgcc
      301 tggtacccgc ccagcttcag ccaggatgtc ccggacctgc tcaagaaggt cacgggcaga
      361 gactaccagg cgtggatgga caagtacttc tacgggaccg agatgccgga gtggaaaccc
      421 tgaggggatg accgctgccg cgccgacccg tcagagcgcc gtcctcggct gcacggcggc
      481 gtgggccagc agcaggcccg tcagcagggc gatggccacg aagagggcct ggaaggcggt
      541 gtcgaggccc accaccagct gcttctggat gatgaactcc agccccttga agcccagccc
      601 cccgggcacc agcaccatga ggcccggcag gagggtgacg acggaggggc ggcgcgtgag
      661 gcgggtgtag aggttgctgc ccaggcccag gacgaaggcc cccaggccca cgccgaactg
      721 ggggcccagc agcgccgagc cgtggcgggt cccgtagaag gccagggcgc aggcggcgaa
      781 gatccagggc aggtcccggg gccgggcctt gaagatcacc acgaaggcgg ccgccgccag
      841 cagcaggatc ggcagcacgg tccagggcgg caggggcagc ggcgtcccca gcagggcgcg
      901 gtccaggagg gggccggtca ggcgctggcc cagggccacg ccgaagccca aggagaggaa
      961 ggtcatggcc gtgtccatga ggcgggccgt gcccgccacc aggttgcccg tggccagctc
     1021 gttcatggac accaccaggc gcagtcccgg caccagcacg atgaggcccg ccaccgtgag
     1081 gatctggggc gagacctggg ggaaccgcca ggcggccgcc accgccagga agcccaccag
     1141 caccccggcc acgggatgga ccagccgcgc caggccggcc cggcggccca gcagcaccgc
     1201 cgccaggccc accagcatgc ccagcagggc cgtgaggacc atctcccgcc agcccccgcc
     1261 caggaacatg gcggcgggcg ccgagcccag gccgaagcac agcaccgtca gccagggccc
     1321 ccagcggtcc ggggccgaga ggatgccccg cacgcggctc cgggcctcgg cggcatcgat
     1381 gtggccgtcg atgagggcgt ccgtggcctc ctgcagatcc gacagcttct ccaggttggt
     1441 ctcccccgca gggctgcgct ggatgaaggt ccagtggtgg ccgccctggc ccagcgaggc
     1501 gaagaaggcc gtgggcaggc cgaagaactg gccgtccagg cccaggcggc ggcagacccg
     1561 ctccagggcg tcctcgaatc ggtgggcggg gatgccgtag gcctggaagg cccggcccag
     1621 ctccaggcag aaggccacct cgggagggag cgcagggggc ggggcggggc gcccttcggg
     1681 accggacaga tcggcagcgg acatgcccca gggtagcggg cccgggagat cccgcggacc
     1741 ttggtcacaa gcgcgggggg gaccgtcctc gcccggccgg tggtctctat gctttggagg
     1801 catggccgtc cacaccaccg catgtccgcg gaactgctac agcacctgcg ccatgcgggt
     1861 gacggtggaa catggccgga tcacggccat cgatccccac gagggcaacc gggccacgcc
     1921 cgaagggccc tgcctcaagg ggctggccta cctggaccgg accgccagcc ccgaacggat
     1981 cctccacccc ctgcggcgca cggccacggg cgccttcgag cgcgtgtcct gggacgcggc
     2041 cctggacctc atcaccgagc ggctgctaac cgcccggcgc gagcacggcc cgcaatccgt
     2101 cttccactac gccggcagcg gcaccaaggg gctgctgaac ggctgcggga tggccttctg
     2161 gcggcgcttc ggcggctgca ccaccaccta cggcgacctc tgctggcccg cgggcctgga
     2221 ggccacccgc ctcaccttcg gggacaaccg ccagagcgcg ccctgggaca ttgccgaggc
     2281 ccgtctcatc gtgatgtggg gcaagaacgc gtcggagacg aacctgcatc agatgcgctt
     2341 cgtgcaccag gccctggcgc agggcgccac cctggtggtg atcgacccgc gccggacgcc
     2401 cacggcggac cgggcccacc tgctgctcca gccccggccc ggcacggacg gggccctggc
     2461 cctggggctg gcccacctgc tcatcgaggc gggccgggtg gatcatgcct tcatccgcga
     2521 ccacgtcctg ggcttcgagg cctacgcggc gctcgtgaag acctggaccc cggcccgcac
     2581 cgccgaggcc tgcggcgtgc ccgaggcgca gatccgggcg ctggcggagc tcatggggcg
     2641 gatcgcgccc atgagccttt gcgcgggctt cggcatgcag cgctacacca acgcgggcca
     2701 ggccatgcgg gccatccagg ccctgctccc cctcacgggc aacctgggaa agcccggcgc
     2761 ggggtgggtc tacgccaacc tcgccaccca gatcttcggg cccgtgaagg atcccctgga
     2821 tttctacccg ccggagcggc ccgatggcgt ggtgcgggtg tccgtgagca cggcgcggct
     2881 gggcgcggac atggccgccc agcaggaccc gcccctgaag gtgggctggg tggagcgggg
     2941 caaccccgcc tgccagaatc cggagacccc cgcggtgctg gcggccctgc gcgccctgga
     3001 cttcctggtg gtggtggacg agcgcctcac ggacacggcc cgggaagccc acctggtcct
     3061 gcccagcaag agcctcttcg agcagacgga tgtgatcggc gcctactggc acgcctatct
     3121 gcagctgcgg cagaaggtgg tggagccgcc gggcgaggtg cggcctgaaa ccgagatcta
     3181 ccgcgccctg ggccagcgcc tgggcatgac gccagaggat ctggccttcc tgcccgcacc
     3241 cggcgacgcg ggcgtggagg cctggctgga ggcccggctg gcgccccacg gcatcaccct
     3301 cgatcagctt cgggagggcc ccgtgctggc cccgggggcg gagcccgtgg ccttcgcgga
     3361 tctgcgcttc accacgccct cgggaaaggt ggagcttgtc agcgaggagg cctcggcccg
     3421 ctggggcgtc ggtcccctgc cggaccatcg cccgcccgtg gaaggcgatc cgggcggacg
     3481 gtatcccctg catctgctga cgcccaacac caagaacggc atccacagcc agttcctgcc
     3541 cctgcaggtg atccgtcagc tcatgcccgg ccccagcctg gagatgggac cggaggatgc
     3601 cctggc
//
LOCUS       DASUDT010000072         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_25805, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000072 DASUDT010000000
VERSION     DASUDT010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25805"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VFV26_01535"
     CDS             complement(<1..772)
                     /locus_tag="VFV26_01535"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX4844867.1"
                     /translation="MDRLVIQGGHPLRGRIRVSGAKNAALPCLAAALLTPEPVVLSNL
                     PAVADIRTMVKVLQALGTEATLAPEGEGFELTATLACAGSEDPKAPYDLVKTMRASIL
                     VLGPLLARFGKATVSLPGGCAIGARPVNLHLEALERMGAVIEISHGYIHASVKGRLKA
                     IDHTFEKVSVGATENILMAAALAEGTTVLRNAALEPEIGDLARRLVKMGARIEGLDTG
                     TLTITGVAELRGCDHAVIPDRIEAGTYLCAVAAACGDVV"
     gene            920..2827
                     /locus_tag="VFV26_01540"
     CDS             920..2827
                     /locus_tag="VFV26_01540"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEX4844868.1"
                     /translation="MTILSKSCVMTGLILASFSVVRALLLARYWDIYQKKAKAGIAQA
                     FLRGLRFDLSIVLTFCGLPILMLLLPVPGLPALDGGVGPWSVGWLAVMLLLGLLMLLL
                     LTADLYYFGDVQRHIGNEILLLWDDRTEIMKMATGGYALPVAIFFVLVGALGWAWFWF
                     ARLPMTPVSHPGLVFTIVLLLVFFGVRGNYKGKSLNIIDAFRGGDTDLGNLSLNGVFT
                     AYHASRASQLTPHRFMEDAEALEKTLEGLGGADRPRVHAEYPLLRAYEENVPNGHNLV
                     FILLESWSRKYVDAFGGRGYGATPNLDRLAAEGIQFRRFHSVGQRSINAIQAVLSGAP
                     VLPGLPQLGAGLESSNVLQLGHAAVSHGYRTLFVKSSKRRSFRVDSIAHSAGFQEYYG
                     AEDMPMLLDYKNPNSSHFGWDYETLMFLKAKLDEGTGPFLGFTFTGTTHVPYPDLGPK
                     FSIRPHAVDTENGFLNTLHYGDWSLGEFFKAAESEPWFDRTIFVMTADTTLGLFQSGE
                     FSERFEVPLVLYAPKILKPGVVDTLGSQLDLLPTIYDLLGFQDPFTALGDSLFRKQCE
                     VALFDQGGVLGLIGKGGYLRHSLRNRLEAVSLGADLSDADFDRMEELLLAFAQTSYRQ
                     LKSNRWFPQAQ"
BASE COUNT          438 a          997 c          930 g          519 t
ORIGIN      
        1 gcaccacgtc gccgcaggcg gcggccaccg cgcagaggta ggtgccggcc tcgatgcggt
       61 cggggatgac tgcatggtcg cagccgcgca gctccgccac gccggtgatg gtgagagtgc
      121 cggtgtccag gccctcgatg cgggcgccca tcttcacgag cctccgggcc aggtcgccga
      181 tctcgggctc cagggcggcg ttgcgcagga ccgtggtgcc ctccgccagg gccgcggcca
      241 tgaggatgtt ctccgtggcc cccacgctca ccttctcgaa ggtgtggtcg atggccttca
      301 ggcggccctt cacggaagcg tggatgtagc cgtggctgat ctcgatgacg gcgcccatgc
      361 gctccagggc ttccaggtgg aggttcacgg ggcgggcgcc gatggcgcag ccgccgggca
      421 ggctcaccgt ggccttgccg aagcgggcga ggagggggcc cagcaccagg atggaggccc
      481 gcatggtctt caccaggtcg tagggggcct tgggatcctc gctgccggcg caggccaggg
      541 tcgcagtcag ctcgaagccc tcgccttccg gcgccagggt ggcctcggtg cccagggcct
      601 gcagcacctt caccatggtg cggatatccg ccaccgcggg caggttggac aggaccaccg
      661 gctccggggt cagcagggcc gccgccaggc agggcagggc cgcgttcttc gccccggaca
      721 cccggatgcg cccccgcagg ggatgtccac cttggatcac cagtcggtcc atcggaaact
      781 ccagccttcc agcctaaccc aggcgcgggc cgccggggcc gcccccttcc ttggaaggac
      841 ggggccccga tggcgtatcg ttgaggtaaa tccatgcagg ggacatttgt ctgtcccttt
      901 gtaccgagga atccgcccaa tgacgattct tagtaaatcc tgtgtcatga cggggctcat
      961 cctcgcgagc ttttccgtgg tccgggcgct gctgctggcg cgctactggg acatctacca
     1021 gaagaaggcc aaggccggga tcgcccaggc cttcctccgc gggctgcggt tcgacctttc
     1081 cattgtcctg accttctgcg ggctgccgat cctgatgctt ctccttccgg tgccaggcct
     1141 gcccgccctc gacggcgggg tgggtccctg gtccgtgggc tggctcgcgg tgatgctcct
     1201 cctggggctg ctgatgctcc tgctcctgac ggcggacctc tactacttcg gggacgtcca
     1261 gcgccacatc gggaacgaga tcctcctgct ctgggatgac cggaccgaga tcatgaagat
     1321 ggccaccggc gggtacgccc tgcctgtggc catcttcttc gtcctggtgg gcgccctcgg
     1381 gtgggcctgg ttctggttcg cccgtcttcc catgacgccc gtgagccacc cgggcctggt
     1441 gttcacgatc gtgctgctcc tggtcttctt cggggtgagg ggcaactaca aggggaagtc
     1501 gctgaacatc atcgacgcct tccggggcgg ggataccgac ctcggaaacc tctccctcaa
     1561 tggcgtgttc accgcctacc acgcttcccg ggcctcccag ctcacgcccc accgcttcat
     1621 ggaggatgcg gaggcgctgg agaagaccct cgaaggcctg ggcggcgccg accggccccg
     1681 ggtccacgcg gagtaccccc tcctccgggc ctacgaggag aacgtcccca acgggcacaa
     1741 cctggtgttc atcctgctgg aaagctggag caggaagtat gtcgacgcct tcggcggccg
     1801 gggctacggg gccacgccca acctggaccg gctcgccgcg gaaggcatcc agttccgccg
     1861 cttccactcc gtggggcagc ggagcatcaa tgccatccag gcggttctct cgggggcccc
     1921 ggtgctgccc gggctgccgc agctgggcgc gggcctggag tcctccaacg tgctgcagct
     1981 gggccatgcc gcggtcagcc acgggtaccg cacgctcttc gtgaagagtt ccaagcggcg
     2041 ctcgttccgg gtcgattcga tcgcccactc cgccggtttc caggagtact acggggccga
     2101 ggacatgccg atgctcctcg actacaagaa tccgaactcc tcccacttcg gctgggacta
     2161 cgaaacgctc atgttcctca aggcgaagct ggacgagggg acgggcccct tcctgggttt
     2221 caccttcacc ggcaccaccc acgtgcccta tcccgatctc ggcccgaagt tctcgatccg
     2281 gccccatgcc gtcgataccg aaaacgggtt cctcaacacc ctgcattacg gcgactggtc
     2341 cctcggggaa ttcttcaagg ccgctgaatc ggagccctgg ttcgaccgga ccatcttcgt
     2401 gatgaccgcc gacacgaccc tgggcctctt ccagtccggc gagttctcgg agcgcttcga
     2461 ggtgccgctc gtgctctacg cgcccaagat cctcaagccg ggtgtcgtgg atacgctggg
     2521 atcccagctc gacctgctgc ccaccatcta cgatctgctg ggcttccagg atcccttcac
     2581 cgcgctgggg gattccctct tccggaagca gtgcgaagtg gcgctcttcg atcagggcgg
     2641 cgtcctcgga ctcatcggga agggcggcta cctgaggcat tccctgcgga accgcctcga
     2701 agcggtgtcc ctgggggcag atctcagcga cgccgacttc gaccggatgg aggagctcct
     2761 cctggccttc gcccagacct cgtaccggca attgaagtcg aaccgctggt tcccgcaggc
     2821 ccagtaatac ccattcgcgt tcaatcgtaa agaatccacc acggagacac agagcatggg
     2881 caca
//
LOCUS       DASUDT010000073         2870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_909330, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000073 DASUDT010000000
VERSION     DASUDT010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_909330"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..919
                     /locus_tag="VFV26_01545"
     CDS             281..919
                     /locus_tag="VFV26_01545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HEX4844869.1"
                     /translation="MSQEVLIVPKREAFGKAAIRDLKKSGMIPAVVYGLNEPPVAIAI
                     SPKAVARVIASDAGMNSVVFLQREGTDIKRHVIIKDLQRDPITGRLRHIDFMRVDMTH
                     KVRVKVPVRLTGTSVGVKSQGGILDFAHREIEIECLPSIIPAHIDVDITGLAVGDSIR
                     FEQITLMPNVVFIGDAHQTVCSVRGKAAEEETAAPAAGEPEVAKKGKKEDKK"
     gene            980..1558
                     /gene="pth"
                     /locus_tag="VFV26_01550"
     CDS             980..1558
                     /gene="pth"
                     /locus_tag="VFV26_01550"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX4844870.1"
                     /translation="MWTLVPLGNPGSEYQDTRHNLGRLMLQRWMADRNLAPAPSRRFP
                     SGALYPLVPGLQALVPATYMNLSGEVCAQAGAAGIYPRNLVLLYDDKDLPLGTGRFRT
                     DGSDGGHNGLRSVFACLGTQEIARLRLGIGPFQRPLVDFVLEPWTDPEWERIEGLDAP
                     FARFLEVLGAAETLDRIANSVNSAGFWETPRP"
     gene            complement(1559..2764)
                     /locus_tag="VFV26_01555"
     CDS             complement(1559..2764)
                     /locus_tag="VFV26_01555"
                     /inference="COORDINATES: protein motif:HMM:NF016150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HEX4844871.1"
                     /translation="MAAIPLQPQERVEAMDVLRGFALLGVFVVNMLFFAAPYQTTLMR
                     PWPEAAQPWFMAFLLLFWQGKFYCLFSFLFGMGFAEQVDRLQGRGEASGPIYRRRLTW
                     LLVIGLAHGLLVWMGDILSIYALLGFLLLLFRTRQPKTLLLWALGLIVAPALLFAGLF
                     LLMKLIQGIPQAATQMAEAARQQDLKVGEAITRSFRIYGHGPYGDLFWLRAKELGMNY
                     GMTLSAAPQILAMFLLGAWTSRRGVLRNPEAHRGLISKVLGVGLAVGLLGNAFHVWCS
                     AKGLPPRNPLALLGMAVYFFAAPALTLAYAAGILRLLQGGAAALLKPLAWNGRMALTN
                     YLMHSLVFTCVFYFFGLGLFGKTSTMQGFCMALALWLLQIPLSKWWLSRHTMGPAETV
                     WRRLTYGKG"
BASE COUNT          540 a          972 c          953 g          405 t
ORIGIN      
        1 ccagctcagc tcgcggttga gcagttcctc ggggcggggg atggggtgga acacgggtgg
       61 ggtcctcggt gccaggatcg tacaacccag atgtaacgga ctgatggtac aggccatgga
      121 tcgtaccgcc cgaagaactt cctttgtttt cctggctttt tcggccagaa tcgatggttc
      181 ggccccccag gagggggaag ccgtacggtc cgcccggacc cgccaccaac gagagggcag
      241 ccaggctcga gccggggctg ccaggtagga ggaaagacgc atgtctcagg aagtcctgat
      301 cgtccccaag cgtgaagcct tcggcaaggc cgccatccgc gacctcaaga agagcggcat
      361 gatccccgcc gtggtctatg gcctcaatga gccccccgtc gccatcgcca tcagccccaa
      421 ggccgtggcc cgcgtcatcg ccagcgacgc cggcatgaac tccgtggtgt tcctccagcg
      481 cgagggcacg gacatcaagc gccacgtcat catcaaggac ctgcagcgcg accccatcac
      541 cggccgcctg cgccacatcg acttcatgcg cgtggacatg acgcacaagg tgcgcgtgaa
      601 ggtgcctgtg cgcctcaccg gcacctccgt cggcgtgaag agccagggcg gcatcctcga
      661 cttcgcccac cgcgagatcg agatcgaatg cctgcccagc atcatccccg cccacatcga
      721 cgtggacatc accggcctgg ccgtgggtga cagcatccgc ttcgagcaga tcaccctcat
      781 gcccaacgtc gtcttcatcg gcgatgccca ccagacggtc tgctccgtcc gcggcaaggc
      841 cgccgaagag gagaccgccg cccccgccgc cggcgagccc gaagtggcca agaagggcaa
      901 gaaggaagac aagaaatagt tccaaccatc attcagccat gcgcgggcgc ctctcggcgc
      961 ccgcggtgta taaggacata tgtggacgct cgtaccgctc ggaaacccgg gctctgaata
     1021 ccaggacacc cggcacaacc tcgggcggct gatgctccag cgctggatgg cggaccggaa
     1081 cctggctccg gccccttcgc gccgctttcc ctcgggcgcc ctctatccgc tggtccccgg
     1141 cctccaggcc ctggtgcccg ccacctacat gaacctgtcc ggcgaagtct gcgcccaggc
     1201 cggggccgcg ggcatctacc cccggaacct ggtgctcctc tacgacgaca aggacctgcc
     1261 cctgggcacc ggccgcttcc ggacggacgg ctcggatggc ggccacaacg gcctccgctc
     1321 ggtcttcgcg tgcctcggca cccaggagat cgcccgcctg cgcctgggca tcggcccctt
     1381 ccagcgcccc ctggtggact tcgtcctgga gccctggacc gaccccgaat gggagcgcat
     1441 tgagggcctg gacgccccct tcgcccggtt tctggaggtc ctcggagccg ccgaaactct
     1501 ggaccggatc gcgaactcgg taaacagcgc gggattctgg gagacgcccc ggccctgatc
     1561 agcccttgcc gtaggtcagc cgccgccaca cggtttcggc gggccccatg gtgtgcctcg
     1621 acagccacca cttcgacagc gggatctgca gcagccagag ggccagggcc atgcagaagc
     1681 cctgcatggt gctggtcttc ccgaagagcc ccagcccaaa gaagtagaag acgcaggtga
     1741 agacaaggga gtgcatcagg tagttggtga gggccatgcg gccgttccag gccagcggct
     1801 tgagcagggc cgccgcgccg ccctggagca ggcgcaggat tcccgcggcg taggccaggg
     1861 tgagggccgg ggccgcgaag aagtacacgg ccatgccgag cagggcgagg ggattgcgcg
     1921 gcggcaggcc cttggcggag caccagacat ggaaggcgtt ccccaggaga ccgacggcca
     1981 agccgacgcc aagcaccttc gagatcaagc cgcgatgcgc ctcggggttc ctcagcacgc
     2041 cccggcggga ggtccaggca cccagcagga acatggcgag aatctggggc gcggcggaca
     2101 gcgtcatgcc gtagttcatg cccagttcct tcgcccgcag ccagaacagg tcgccgtagg
     2161 ggccgtggcc gtagatccgg aagctgcggg tgatggcctc gcccactttc agatcctgct
     2221 gcctggcggc ctcggccatc tgagtggcgg cctgggggat gccctggatc agcttcatca
     2281 acaagaacaa cccagcgaag agaagggccg gagccacgat caggccgagc gcccagagca
     2341 ggagggtctt cggctggcgg gtgcggaaca gcagcagcag gaagcccagc agggcgtaga
     2401 tgctgaggat gtcgcccatc cagaccagca ggccgtgagc caggccgatg accagcagcc
     2461 aggtcagccg ccgccggtag atggggcccg acgcctcccc ccggccctgg aggcggtcca
     2521 cctgctccgc gaaccccata ccgaagagga aggagaagag gcagtagaac ttcccctgcc
     2581 agaagagcag gaggaaggcc atgaaccagg gctgcgcggc ttcgggccag ggccgcatca
     2641 gggtggtctg gtagggcgcg gcgaagaaca gcatgttcac cacgaagacg cccagcaggg
     2701 cgaagccccg cagcacatcc atggcctcga cgcgttcctg gggctggagg ggtatggcag
     2761 ccatggcaac ctcggaggga tgctccaggc taggcggaaa cggccggggg atgggggcgc
     2821 tctgtcgaaa cgtgtgaacc cgggacccgg gattccagac ttttcattga
//
LOCUS       DASUDT010000074         2448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_798849, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000074 DASUDT010000000
VERSION     DASUDT010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798849"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VFV26_01560"
     CDS             <1..295
                     /locus_tag="VFV26_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844872.1"
                     /translation="VSAARALKEKQQGFYDRVTELRWSQKGPVAYIEGLPAPIYLSRQ
                     DVTKNVPNFQGLFVDRLSQRPDLARLRYIDLRWDEEVAVGEPEDAPVPAKPGR"
     gene            389..1603
                     /gene="ftsA"
                     /locus_tag="VFV26_01565"
     CDS             389..1603
                     /gene="ftsA"
                     /locus_tag="VFV26_01565"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX4844873.1"
                     /translation="MAQRAVLLGLDLGASKVVAVVAVQEEDGTLNVTGTGQASPQGGF
                     TQGQITDMDLCTRAIVRAVEEAMNTAGQTKVDGIRVAVDGIQFKGENLRDSITISSGD
                     KIITASDRDRVLEQATNGCKLAKEELVLHRIPQMFHIKGQRDIRNPVGMFGESLEAEV
                     RIIVAPSPVIMNIQLALKNAGLHGADLIYSPLASAEAVLSREDRENGAVVLDIGEHLT
                     HLGIFLHGTLFHSAVIPIGGMHFTRDLEITKHLGGIAASERIKIRFGTVLHTHVPPEE
                     AIELEEEGRLVPRREIAEVLQARAAELLNLVLAEMGRTGLMHEIHGGVHLVGGGALLT
                     HLAILAQTILGRPRVVLGRILGVAGLPQATGNPYFVNALGAVKSLARDMGEIRGKQDR
                     GDGFLGRFKKLF"
     gene            1627..2010
                     /locus_tag="VFV26_01570"
     CDS             1627..2010
                     /locus_tag="VFV26_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4844874.1"
                     /translation="MRGELIHGEITEKVLGAAIEVHKHLGPGLLESTYEACLCHELEI
                     RGLSFQRQVQLPLEYKGLHVQAAFRLDLVVEDKIIVELKSQDGIHPIHEAQLMTYMKL
                     TGIRVGLLLNFNVPIMKDGIVRRVL"
     gene            2105..>2448
                     /locus_tag="VFV26_01575"
     CDS             2105..>2448
                     /locus_tag="VFV26_01575"
                     /inference="COORDINATES: protein motif:HMM:NF012320.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844875.1"
                     /translation="MSETPFLPCPHSLPGANIKVLGVGGAGCNAINRMIDGGVTGVQF
                     IAMNTDQQSLAQSKAHLKLPLGPQSSRGLGAGGSAERGAVAAEESRDEVLAALQGADM
                     IFITAGMGGGTGT"
BASE COUNT          450 a          807 c          782 g          409 t
ORIGIN      
        1 cgtgagcgcc gcccgggctt tgaaggaaaa gcagcagggc ttttatgatc gggtcacgga
       61 gctccgttgg agccagaagg ggcctgtggc ctacatcgag ggccttccgg cgccgatcta
      121 cctttcccgc caggatgtga cgaaaaacgt gcctaatttc cagggcctgt tcgtggatcg
      181 tctctcccag cggccggatc tggcccggct ccgctacatc gacctgcggt gggacgagga
      241 ggtggccgtg ggagaacccg aggatgcccc agtcccggcc aagccgggac gctgagcaga
      301 agcggaagtt ccaagtctat tttccgggtg caaaggctcg aacacagccc ggaactggtg
      361 tacacctaga gcaaggaaaa ggatcttcat ggctcagcgt gccgttcttc tcgggctcga
      421 cctcggggca agcaaggtgg tggcggtggt ggccgtccag gaggaagacg ggacgctgaa
      481 tgtgaccggc acgggccagg cctcgcccca gggcggcttc acccagggcc agatcaccga
      541 catggacctc tgcacccggg ccatcgtgcg ggccgtggaa gaggccatga acaccgccgg
      601 ccagaccaag gtggatggca tccgcgtggc cgtggacggc atccagttca agggcgagaa
      661 cctccgcgat tccatcacca tcagcagcgg cgacaagatc atcacggcct cggaccggga
      721 ccgggtgctg gagcaggcca ccaacggctg caagctggcc aaggaggagc tggtcctcca
      781 ccgcatcccc cagatgttcc acatcaaggg ccagcgcgac atccgcaacc ccgtgggcat
      841 gttcggcgaa tcgctggagg ccgaggtccg catcatcgtg gcgcccagcc ccgtgatcat
      901 gaacatccag ctggccctca agaacgcggg gctccatggc gcggacctga tctactcgcc
      961 cctggccagt gccgaggcgg tgctgagccg cgaggaccgc gagaacggcg ccgtggtgct
     1021 cgacatcggc gagcacctca cccacctggg catcttcctg cacggcaccc tgttccattc
     1081 ggcggtgatc cccatcggcg gcatgcactt cacccgcgat ctggagatca ccaagcacct
     1141 gggcggcatc gccgcctcgg agcgcatcaa gatccgcttc ggcaccgtgc tgcacaccca
     1201 cgtgcccccc gaggaagcca tcgaactcga ggaggagggc cgcctggtgc cccgccgcga
     1261 gatcgccgaa gtgctccagg cccgggccgc ggaactgctg aacctggtgc tggcggaaat
     1321 gggccgcacg ggcctcatgc acgagatcca cggcggcgtg catctcgtgg gcggcggcgc
     1381 cctgctgacc cacctcgcca tcctggccca gaccatcctg ggccgtcccc gcgtggtcct
     1441 gggccgcatc ctgggcgtgg ccgggctgcc ccaggccacc ggcaacccct acttcgtgaa
     1501 cgccctgggc gccgtgaagt ccctcgcccg ggacatgggc gaaatccgcg gcaagcagga
     1561 ccggggcgat ggattcctcg gccgattcaa gaaactgttc tgaaggcttc accacggaga
     1621 cacggagtgc gcggagaact gattcacgga gagatcacgg agaaggtgct tggggctgcc
     1681 atcgaagtcc acaagcacct tggtcctggc ctccttgagt cgacctatga ggcctgcctt
     1741 tgtcatgaat tggaaatccg cgggctttct ttccagcggc aagtgcagct tcccctcgag
     1801 tacaaaggcc ttcatgtcca ggcagccttc cgtctggatc tggtggtcga agacaagatc
     1861 atcgttgagt tgaaaagcca ggatgggata caccctattc atgaggcgca gctgatgacc
     1921 tacatgaaat tgaccgggat ccgtgtgggc ctcttgttga acttcaatgt tccaatcatg
     1981 aaagacggca tcgtccgtcg agtcttgtag ctctccgtgc ttttctcaac gctttctctc
     2041 agtgttctcc gtgtctccgt ggtgaatcct gctttttgaa ttgccccagc ctccgggagc
     2101 cccgatgtcc gagaccccct tcctcccctg cccccacagc ctgcccggcg ccaacatcaa
     2161 ggtgctcggc gtcggcgggg ccggatgcaa tgccatcaac cgcatgattg atgggggcgt
     2221 caccggcgtg cagttcatcg ccatgaacac ggaccagcag agccttgccc agagcaaggc
     2281 ccacctgaag ctgcccctgg gcccccagag cagccggggc ctgggcgcgg gcggcagcgc
     2341 cgagcgcggg gccgtggccg ccgaggagag ccgcgacgag gtgctggcgg ccctccaggg
     2401 cgccgacatg atcttcatca ccgcgggcat gggcggcggc acgggcac
//
LOCUS       DASUDT010000075         6901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1483845, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000075 DASUDT010000000
VERSION     DASUDT010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6901
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483845"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VFV26_01580"
     CDS             <1..340
                     /locus_tag="VFV26_01580"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HEX4844876.1"
                     /translation="FILNDPPYGTERSYNGLRLAAAAAKREGIEVRVFLMGDAAACAK
                     KGQTTPNGYYNLERMLKAVTMRHGQVGVCGTCMDARGITEAELGEDCRRSTLEELTDW
                     TLWADQVLVF"
     gene            complement(337..1356)
                     /gene="holA"
                     /locus_tag="VFV26_01585"
     CDS             complement(337..1356)
                     /gene="holA"
                     /locus_tag="VFV26_01585"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEX4844877.1"
                     /translation="MAAPAWLDHSFALVHGEDGDGRRKAVAEWTRRHVDAEWADFSLT
                     VCSEGCPWPEVVAALQEAAPLGADVRTVLVPAADNLFTRAKELPGAVKSLLEKPPQGV
                     NLLLVAWNTLPAAPGKALGAKPWTDWTKAGRILKVGALEPAEIPGFIEAEARRLGLSL
                     HGAAATLLTQRQGGNPGLIKRALEVLDLLSEDRRVSEAMVDQVTFRLAEQKAFAWSGA
                     WQKGDAAGALKALRMALEDGDEPLMLLGQARREVDRLLRYAEAQAAGLKGPELTSALG
                     LSPKQAFLLDGYRGAFEKLKAQGIKALLGRLNQCERDLKGMALSRSEAPLLDLTLSLC
                     RAWGR"
     gene            complement(1356..1829)
                     /gene="lptE"
                     /locus_tag="VFV26_01590"
     CDS             complement(1356..1829)
                     /gene="lptE"
                     /locus_tag="VFV26_01590"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HEX4844878.1"
                     /translation="MRSAAWAKQGETIRLARFRNLTPRLGLEDRFTKALENRVVAASP
                     WRLVGAGEPSRWVLQGTLETYTSRPIGLTLGNDRAKASAGSASRVEVAVVASVELLDG
                     QTGAVVLSRRGLTFSNQYRVDQNFASFDSRELQVLESLADDFAESFLIQLLEGTD"
     gene            complement(1919..2359)
                     /locus_tag="VFV26_01595"
     CDS             complement(1919..2359)
                     /locus_tag="VFV26_01595"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4844879.1"
                     /translation="MDPQEHDDACGETGPYTELTWSVIRAGIEVQKCLGPGLLESAYE
                     ACLAYELELAGHTVERQVAVPIRYRDLIVPNAFRMDLLIDGLLVVELKVAEAITKEHE
                     AQVLSYLRFSGKPVGLLMNFALQPLAKRGVRRFLMSSPFSASSV"
     gene            complement(2432..2953)
                     /gene="hpt"
                     /locus_tag="VFV26_01600"
     CDS             complement(2432..2953)
                     /gene="hpt"
                     /locus_tag="VFV26_01600"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEX4844880.1"
                     /translation="MRDRITPLLTEAQIRTRVQELGAQLSRDYAGQDLVVVGLLNGVF
                     PFFADLVRAMDLDIDVSFMQVSSYGAGTESTGEVHILKDLDRSIQGRHALVVEDIVDT
                     GLTLFKVRNLLRDREPLSLKICTLLDKPSRRKVEVPVDYIGFTIEDHFVVGYGLDFDG
                     KLRNLPYVGVYHP"
     gene            3110..3724
                     /locus_tag="VFV26_01605"
     CDS             3110..3724
                     /locus_tag="VFV26_01605"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX4844881.1"
                     /translation="MSLTAPRAADRIPGPASPYHAPEVRMWVEAAQGGDQAAFASLVR
                     LFSRDVYGKAFSIVKNHQDADDVVQETFIRVFRALPGFRFESSFRTWLITIATRQALN
                     FRERMAREHDSLEGPDGALDHPALRVEETQASALLDQEARRLLHEALPKLPRRQKEAL
                     TLKLQHDWKYEQIAQQMGTSVGSVKAHIFHAIQNLTRHVKGGRA"
     gene            3721..4227
                     /locus_tag="VFV26_01610"
     CDS             3721..4227
                     /locus_tag="VFV26_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844882.1"
                     /translation="MTAQPLPLPETCLAALAAVERDPLDPGPMAEAHLKACTACAEAR
                     VFFLAQEDSPEALAPAGYFEHLPGRLLRKLPARPPLHGRLGPLGWAAAAVVLMAVGTG
                     AFLAGRANRTPYVEAALPRQPDILETSTSDTPFHNHEEDAAQVQALSPEEMKALLKRL
                     DSAPAPTR"
     gene            4233..4733
                     /locus_tag="VFV26_01615"
     CDS             4233..4733
                     /locus_tag="VFV26_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844883.1"
                     /translation="MLRPALLMTLLLFALPGLAQAEDERPLARFRLDQLQQTVGLPED
                     QARAVVDRWSRYDREQFEKTQQIQQLRRRFNDILLGPGSEEDKNAKVRPMLEQFVELR
                     RQQADLKFKFEEDIRARLSPAQQVRLIIQVEDMQRRMLEAIRQGGVGNRPGLRPGMGG
                     GRRGGR"
     gene            complement(4734..6452)
                     /locus_tag="VFV26_01620"
     CDS             complement(4734..6452)
                     /locus_tag="VFV26_01620"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX4844884.1"
                     /translation="MISVAPEFETWMEAPAADELRLIPIGGLGEFGMNALVVHSARSL
                     FLVDCGQLFPSDDQPGIDSIVPDFAYLEPFADRLQAVLLTHGHEDHIGALPYFLRRWP
                     VPVYGTAFTLALLEGKLREHGLDTGLLHPVKDYGRIKVGDGEIEAEWIPVTHSIPDAC
                     ALALHTPQGVLVHSGDFKIDPEPLDGRLTGLDRLKALGDAGVRLLMADSTNVGRPGRS
                     PSEAVCRDGLEAAFEQTKGRLFVTTFSSNIHRLQTLVDLAYEFRRRVVLLGRSLDRNL
                     TLARSLKLLDLPDDILTDVKDAQLFDRDELLVLCTGSQGEPMSGLARLLRQEVKGLRI
                     EPGDRLVVSARSIPGNEVAISRMLDTAERLGAETSLEGLGPVHASGHGSRDELADLIR
                     AVRPAQMVPVHGTFRNLRAHGKLAAELGWVPERISLLDGGLCLRLFADGRLDMPGTVP
                     VGKCFVHEGVDHMVDARVVKDRLILQEDGVVFATLLVDPQTGDLAADPTILSRGFVML
                     SDDESYAELLSGVARKAYEEAPPPVRKDGEALRDTLRLALRRIIRKTTQSRPLVIPVI
                     LEAPSS"
     gene            complement(6449..>6901)
                     /locus_tag="VFV26_01625"
     CDS             complement(6449..>6901)
                     /locus_tag="VFV26_01625"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HEX4844885.1"
                     /translation="ARLLTEDIPWGRMVLMFQLEVAQKLMGEPGTKAYGPLSVVAQLC
                     CRLTRLVKLGPGSFRPAPKVDSAVVQFDPRPEAPSLAERRALLTVLHRSFAHRRKTLA
                     NNWQGALPAEALAAAGLAPALRAEVIAPAAWLAATRSLLIHHPEVFPS"
BASE COUNT         1159 a         2417 c         2291 g         1034 t
ORIGIN      
        1 gttcatcctc aacgatccgc cctacggcac cgagcgcagc tacaacggcc tgcgcctcgc
       61 agccgccgca gccaaacgcg aaggcatcga agtccgggtc ttcctcatgg gcgacgccgc
      121 ggcctgcgcc aagaagggcc agaccacacc caacggctac tacaacctgg aacgcatgct
      181 gaaggccgtc accatgcgcc acggacaggt aggcgtatgc ggcacctgca tggacgcccg
      241 gggcatcacc gaagccgagc tgggcgagga ctgccgccgc agcacgctgg aggaactcac
      301 ggactggacg ctgtgggcgg accaggtgct ggtcttctag cgtccccagg ccctgcatag
      361 ggagagcgtc aggtccagca ggggtgcctc gctgcgggac agggccatgc ccttgaggtc
      421 gcgttcgcac tggttcaggc ggcccagcag ggccttgatg ccctgggcct tcagcttctc
      481 gaaggcgccc cggtagccgt ccagcaggaa ggcctgcttg ggggacaggc ccagggccga
      541 agtcagttcg ggccctttga gccccgccgc ctgggcttcc gcgtagcgca gcagacggtc
      601 tacctcgcga cgggcctggc ccagcagcat caggggctcg tccccatcct ccagcgccat
      661 gcggagggcc ttgagggccc cggcggcatc gcccttctgc caggctcccg accaggcgaa
      721 ggccttctgc tccgccagcc ggaaggtcac ctggtccacc atggcctcgg aaacgcggcg
      781 atcctccgac agcaggtcca gcacctccag ggcccgcttg atgaggcccg gattcccgcc
      841 ctggcgctgg gtcagcaggg tggccgcggc cccgtggagg gacagcccca gccgccgggc
      901 ctccgcctcg atgaagccgg ggatctccgc aggctccagg gcccccacct tgagaatccg
      961 gcccgccttg gtccagtccg tccagggctt ggcgcccagg gccttcccgg gggccgcggg
     1021 cagggtgttc caggccacca gcagcaggtt caccccctgg ggaggtttct ccagcagcga
     1081 cttcacggcg cccggcagtt ccttggcgcg ggtgaacagg ttgtcggcgg cgggcacgag
     1141 cacggtgcgg acatccgccc caagcggcgc cgcctcctgg agggccgcca ccacctcggg
     1201 ccaggggcag ccctcggagc agaccgtcag cgagaagtcc gcccattcgg catccacatg
     1261 ccgccgggtc cattccgcca cggccttccg gcgcccatcg ccatcctccc cgtggaccag
     1321 ggcaaaagaa tggtccagcc aggcgggagc cgccatcagt ccgtgccttc cagcagctgg
     1381 atgaggaagc tttctgcgaa atcgtccgcc aggctctcca gcacctgcag ttcccggctg
     1441 tcgaagctgg cgaagttctg atccacccgg tactggttgg agaaggtcag gccccggcgg
     1501 gagagcacca cggccccggt ctggccgtcc agcagctcca cgctggccac cacggccacc
     1561 tccacccggg aggccgagcc ggcgctggcc ttggccctgt cattgccaag ggtgaggccg
     1621 atggggcggg atgtgtaggt ttccagggtg ccctggagca cccagcgcga gggttcgccc
     1681 gcccccacca ggcgccaggg gctggccgcc accacgcggt tttccagggc cttggtgaag
     1741 cggtcctcca ggcccagccg gggtgtcagg ttgcggaacc gcgccaggcg gatggtctcc
     1801 ccctgcttgg cccaggccgc cgaccgcacc tgccggtcca ggcggtggta tccgcacgcc
     1861 agggaggccg caagaacgag agagaaaaaa acaaggcgga acacagaaga cacagaaatc
     1921 acacagaaga cgcagagaaa ggagaggaca tcaggaacct ccggacgcca cgcttggcaa
     1981 gaggttggag ggcaaaattc atcagcaggc cgacaggctt tcccgaaaat cgcaggtaac
     2041 tcagaacctg agcctcatgt tccttcgtga tggcttcggc cactttcaat tcgacgacga
     2101 gaagaccatc tatcagaaga tccattctga acgcattggg cacaatcagg tcacggtacc
     2161 gaatgggcac agcaacctgc ctttccacgg tatgcccagc caactccaac tcataggcga
     2221 ggcaggcttc ataggccgat tcaagcaacc caggaccaag gcatttctga acttcgatcc
     2281 ccgcacgaat cacagaccag gtcagctctg tgtaagggcc cgtttcgcca catgcatcat
     2341 cgtgctcttg tgggtccatg ctgccgcacc tccgatgtat ttctgtgccc tctgcggccc
     2401 tctgtgttct ccgtgttcca actctttaaa actatggatg ataaacaccc acgtacggca
     2461 ggttgcggag cttgccgtcg aagtcgaggc cgtagccgac cacgaagtgg tcctcgatgg
     2521 tgaatccgat gtagtccacc ggcacctcga ccttgcggcg gctgggcttg tccaggaggg
     2581 tgcagatctt caggctgagg ggctcccggt cccggagcag gttgcggacc ttgaacaggg
     2641 tgaggccggt atccacgatg tcctccacca ccagggcatg gcggccctgg atggagcggt
     2701 ccaggtcctt gaggatgtgg acctcgcccg tgctttccgt gcccgcgccg tagcttgaga
     2761 cctgcatgaa gctcacatcg atgtccaggt ccatggcccg gaccagatcg gcgaagaagg
     2821 ggaacacgcc gttcaggagc cccaccacca cgagatcctg gcccgcatag tccctggaca
     2881 gctgggcgcc cagttcctgt acccgggtcc ggatctgcgc ttccgtgagc agcggggtga
     2941 tgcggtcgcg catgaagact cctgaaaacc ggggctgaaa agattcgcct cattcccatt
     3001 caaccccaga agggcttccc gggtccatcc agggacggcg tgaaccctcg tcaatatccc
     3061 cgcgccggag actaggatga tggcggaagc cactttgaac gagcccctga tgtccctgac
     3121 ggccccccgc gccgccgacc ggatccccgg tccggcctcg ccgtaccatg cgccggaggt
     3181 gcggatgtgg gtcgaggctg cccagggggg cgaccaggcg gccttcgcca gcctggtgcg
     3241 cctgttttcc cgcgatgtct atggcaaggc cttttccatc gtcaagaacc accaggacgc
     3301 ggacgacgtc gtgcaggaga ccttcatccg ggtcttccgg gccctgcccg ggttccgctt
     3361 cgaatcgtcc ttccgcacct ggctcatcac catcgccacc cgccaggccc tgaacttccg
     3421 ggaacgcatg gcccgggagc acgacagcct cgaagggccg gacggcgccc tggaccaccc
     3481 ggccctgcgg gtggaagaga cccaggcctc cgccctgctg gaccaggagg cccggcgcct
     3541 gctgcacgag gccctgccca agctgccgcg gcgccagaag gaggccctca ccctgaagct
     3601 gcagcacgac tggaagtacg agcagatcgc gcagcagatg ggcacctccg tgggcagcgt
     3661 gaaggcccac atcttccacg ccatccagaa cctcacccgc cacgtcaaag gaggccgcgc
     3721 atgactgccc agcccctccc tcttcccgag acctgcctcg cggccctcgc tgcggtcgag
     3781 agggatcccc tggatcccgg ccccatggcc gaggcccatc tgaaggcctg caccgcctgc
     3841 gccgaagccc gggtgttctt cctggcccag gaggacagcc ccgaggcgct ggcccccgcc
     3901 gggtatttcg agcacctgcc gggccgcctc ctccgcaagc ttccggcccg cccccccctg
     3961 catggccgcc tgggccccct cggctgggcc gccgccgcgg tggtcctcat ggccgtgggc
     4021 accggcgcct tcctcgcggg ccgcgccaac cggactccct atgtggaggc cgccctgccg
     4081 cgccagcccg acatccttga aacatccact tccgacaccc ccttccacaa ccatgaagaa
     4141 gatgcggctc aggtccaggc cctcagcccc gaggaaatga aggcgctcct gaagcgtctg
     4201 gattcggctc cggcccccac gaggtgatcc ccatgctccg ccctgccctg ctcatgaccc
     4261 ttctgctctt tgccctgcct ggcctggccc aggccgagga tgagcgcccc ctggcccggt
     4321 tccgcctgga tcagctccag cagaccgtgg gccttcccga ggaccaggcc cgcgccgtgg
     4381 tggaccgctg gtcccgctac gaccgcgagc agttcgagaa gacccagcag atccagcagc
     4441 tccgccggcg cttcaacgac atcctcctgg ggcccggctc tgaggaggac aagaacgcca
     4501 aggtccggcc catgctggag cagttcgtgg agctgcgccg ccagcaggcg gacctcaagt
     4561 tcaagttcga ggaggacatc cgggcccggc tgagccccgc ccagcaggtg cgcctcatca
     4621 tccaggtgga ggacatgcag cggcgcatgc tggaggccat ccgccagggc ggggtcggca
     4681 accggcccgg cctccgcccg ggcatgggcg gaggccgcag aggcgggcgc tgatcaggag
     4741 cttggtgctt ccaggatcac cggaatgacc aggggccggg attgcgtggt cttccggatg
     4801 atgcggcgca gggccaggcg cagggtgtcg cgcagggcct cgccatcctt gcggaccggg
     4861 ggcggcgcct cctcgtaggc tttgcgggcc acgcctgaca gcagctcggc gtaggactcg
     4921 tcatcggaca acatgacgaa gccgcggctg aggatggtgg ggtccgccgc caggtcgccc
     4981 gtctggggat ccaccagcag ggtggcgaac accacgccgt cctcctggag gatgagccgg
     5041 tccttcacca cgcgggcatc caccatgtgg tccacccctt cgtgcacgaa gcacttgccc
     5101 acgggcaccg tgcccggcat gtccagccgg ccgtccgcga agaggcggag gcagagcccc
     5161 ccgtccagga gcgagatgcg ctctggtacc cagcccagct cggcggcgag tttcccgtgg
     5221 gcccggaggt tccggaaggt gccatgcacc ggcaccatct gggccggacg cacggcccgg
     5281 atgaggtcgg ccagctcgtc acggctgccg tggccggagg cgtggacggg accgaggccc
     5341 tccagcgagg tctccgcccc caggcgctcg gccgtgtcca gcatgcgcga gatggccacc
     5401 tcattgccgg ggatggaccg ggcgctcacc accagccggt cgccgggctc gatgcgcagg
     5461 cccttgacct cctggcggag cagccgggcc aggccgctca tgggctcgcc ctggctgccc
     5521 gtgcagagca ccagcagttc atcgcgatca aaaagctgcg cgtccttgac gtcggtcagg
     5581 atgtcgtccg gcaggtccag cagcttcagc gaccgggcca gggtgaggtt gcggtcgagg
     5641 ctgcggccca gcagcaccac ccggcggcgg aactcgtagg ccaggtccac cagcgtctgg
     5701 aggcggtgga tgttggagct gaaggtggtg acgaagagcc gccccttcgt ctgttcgaag
     5761 gccgcttcca ggccgtcgcg gcacacggct tccgaaggcg accggcccgg ccggcccacg
     5821 ttggtggaat ccgccatgag caggcgcacc ccggcgtcgc ccagggcctt cagccggtcc
     5881 aggcccgtga gcctgccgtc caggggctcc ggatcgatct tgaagtcgcc cgaatgcacc
     5941 agcacgccct ggggcgtgtg cagggccagg gcgcaggcat cggggatgct gtgcgtgacg
     6001 ggaatccact cggcctcgat ctcgccatcc cccaccttga tgcggccgta gtccttcacc
     6061 ggatggagca ggcccgtatc cagtccgtgt tcccgcagct tgccctccag cagggccagg
     6121 gtgaaggcgg tgccgtacac gggcacgggc cagcgccgca ggaagtaggg cagcgcgccg
     6181 atgtggtcct cgtggccgtg ggtgagcagc accgcctgga ggcggtcggc gaagggctcc
     6241 aggtacgcga agtccggcac gatggaatcg atgcccggct ggtcatccga ggggaagagc
     6301 tggccgcagt ccaccaggaa gaggctgcgg gcgctgtgga ccaccagcgc gttcatgccg
     6361 aattcgccga ggcctccgat ggggatcagc cgcagttcat cggcggcggg cgcctccatc
     6421 caggtttcga attcgggtgc gacggatatc acgatgggaa tacctccggg tggtggatca
     6481 acagggatcg ggtggcggcc agccacgccg cgggcgcgat cacctccgcg cgcagggccg
     6541 gagccaggcc cgcagctgca agggcttcgg caggcagcgc tccctgccag ttgttcgcca
     6601 gggtcttgcg gcggtgggcg aaggagcggt gcaggaccgt cagcagggcc ctccgctcag
     6661 ccagggaggg cgcctccggg cggggatcga actgcaccac ggccgaatcc actttggggg
     6721 ccgggcggaa ggaaccgggg ccgagcttga ccagccgggt gaggcggcag cagagctgcg
     6781 cgaccacgga gagcggtccg taggccttcg tgccgggctc gcccatgagc ttctgggcca
     6841 cctccagctg gaacatcagc accatgcggc cccaggggat gtcctcggtg agcagccggg
     6901 c
//
LOCUS       DASUDT010000076         2350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1108397, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000076 DASUDT010000000
VERSION     DASUDT010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108397"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VFV26_01630"
     CDS             <1..276
                     /locus_tag="VFV26_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844886.1"
                     /translation="EAFLVGAAGRLRHRAHARGHKRHLSSAQERLDSAWGALEAEVKA
                     LEDSMQGLDEAQREALKEILTRGRTLAFRALIQTQPKPTPNAEAEQP"
     gene            404..1282
                     /gene="hemC"
                     /locus_tag="VFV26_01635"
     CDS             404..1282
                     /gene="hemC"
                     /locus_tag="VFV26_01635"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX4844887.1"
                     /translation="MRTVTVATRGSALAVGQAEPLVRYLESKGYEVSWRKFSTSGDQW
                     LQGPLDKQVGGGFFTKELEDAMAAGAADLLIHSLKDVSLERPAGIVPACIPLREDPAD
                     WLVMRPDAPEELTIGTSAVRRERVLSQLFPKARFTWIRGNVQTRLQRVRDGVLRDEPL
                     HATLLAAAGLKRLGLDLSGLTVRPLTPEELPSAPGQGALLAEARADRPDLIEALAGMH
                     DAMTARCVTLERQVLAGIGGGCQQPLGALATPQADGTLLLQAAYAPEGDLRRAEARGT
                     DDALLLKAVLQGIGLS"
     gene            1279..1971
                     /locus_tag="VFV26_01640"
     CDS             1279..1971
                     /locus_tag="VFV26_01640"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX4844888.1"
                     /translation="MTSTAPAPRLALARPAQHPLADTVRKAGWEPVPYSFTSLKVSSA
                     PPPIPFAEAQALLVLSPSGARVAAPRLPAGMVCLVQGAGTADALGREDLAVHLPDEAR
                     AEALWELLQSRFPGGGDFILARGERSREYLEVATRGSEWRIHPWITHRESAKDPFPPL
                     PEVEGVLALSPLQAEILAPLASDVQRFAWGEATAEAFAKAGAPAHAQCEPKPSLLWAM
                     LSHHLNKEESPC"
     gene            1965..>2350
                     /locus_tag="VFV26_01645"
     CDS             1965..>2350
                     /locus_tag="VFV26_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEX4844889.1"
                     /translation="MLNRSRRLRTTAAMRNLVAETDLRPRHLIQPHFVQPHPGSSDIA
                     SLPGIVRAGVDETVRQVEQDLKKGLASVLLFGVPDAESKSPDGRYACDHNGVIPVAVK
                     ALKKAFGSDLIVMTDVCLCGCTSHGH"
BASE COUNT          341 a          878 c          809 g          322 t
ORIGIN      
        1 gaggccttcc tggtgggcgc cgcgggccgt ctccgccacc gggcccatgc ccgggggcac
       61 aagcgccatc tctcctcggc ccaggagcgg ctggattcgg cctggggcgc cctggaagcc
      121 gaggtgaagg ccctggagga ctccatgcag gggctggacg aggcccagcg cgaagccctc
      181 aaggaaatcc tgacccgggg ccggaccctg gccttccggg ccctgatcca gacccaaccc
      241 aagcccaccc cgaacgcaga ggcggaacag ccatgagaac agagcaggag cgtcgttcca
      301 ctttggcgaa gccgaagccc gcagggtgcg gcacagggag gctccgcctc ggcgagtgga
      361 gcgagccgga gcacgcgtcg cgtgcgatag gcggaggtgc cgcatgagaa cagtgaccgt
      421 tgccacccgt ggatccgccc tggccgtggg ccaggccgag cctctggtga ggtatctcga
      481 atcgaagggc tatgaggtct cctggcggaa gttctccacc tctggcgacc agtggctcca
      541 gggccctctg gacaagcagg tgggcggcgg cttcttcacc aaggagctgg aggacgccat
      601 ggccgcgggc gcggccgacc tcctgatcca cagcctcaag gacgtgtccc tggagcggcc
      661 cgcgggcatc gtgccggcct gcatccccct tcgcgaggat cccgccgact ggctggtgat
      721 gcgcccggac gcgcccgagg aactcaccat cggcaccagc gccgtgcggc gcgagcgcgt
      781 gctgagccag ctcttcccca aggcccggtt cacctggatc cgcggcaacg tccagacccg
      841 cctccagcgc gtgcgcgacg gcgtcctgcg ggacgaaccc ctccacgcca ccctgctggc
      901 cgccgcgggc ctgaagcgcc tgggcctgga tctctccggc ctcaccgtgc ggcctttgac
      961 tcctgaggaa ctcccgtcgg ctccggggca gggcgccctg ctggccgagg cgcgggcgga
     1021 ccggcccgac ctgatcgagg ctctggcggg gatgcatgac gccatgaccg cccgctgcgt
     1081 caccctcgag cgccaggtgc tcgcgggcat cggcggcggc tgccagcagc ccctgggcgc
     1141 cctggccacg ccgcaggcgg atggcacgct gctgttgcag gccgcctacg cgccggaggg
     1201 ggacctgcgc cgggccgagg cccggggcac cgacgacgcc ctcctcctga aggccgtcct
     1261 ccaggggatc gggctctcgt gacctccacg gcaccggccc cccgcctggc cctggcccgg
     1321 cccgcccagc acccgctggc ggacacggtg cgcaaggccg gatgggagcc cgttccctat
     1381 tccttcacca gcctgaaggt gtcctcggcg ccacccccca ttcccttcgc agaagcccag
     1441 gccctgctgg tattgagccc ttcgggggcg agggtggctg cgccgcgcct gccggcgggc
     1501 atggtctgtc tggtgcaggg cgccggcacc gcggatgccc tgggacggga ggacctggcg
     1561 gtccacctgc cggacgaggc ccgggccgag gccctctggg agctgctgca atcccggttt
     1621 cccgggggcg gcgacttcat cctggcccgc ggcgagcgga gccgggagta tctggaagtg
     1681 gccacccggg gcagcgagtg gcggatccat ccctggatca cccaccgcga atcggcgaag
     1741 gatccctttc cgccgctgcc cgaggtggaa ggcgtgctgg ccctgagccc gctccaggcc
     1801 gagatcctcg cgcccctggc ctcggacgtg cagcgtttcg cctggggtga ggccaccgcg
     1861 gaggccttcg ccaaggctgg cgcaccggcc catgcccagt gtgaaccgaa gcccagcctg
     1921 ctctgggcca tgctctcgca ccacctgaac aaggaggagt ccccatgctg aaccgctccc
     1981 gccgcctccg caccaccgcg gccatgcgca acctggtggc cgagacggac ctccgccccc
     2041 ggcacctcat ccagccccac ttcgtgcagc cccacccggg cagcagcgac atcgccagcc
     2101 tgccgggcat cgtccgcgcc ggggtggatg agacggtccg ccaggtggag caggatctga
     2161 agaaggggct cgccagcgtg ctgctcttcg gcgtgcccga tgcggaatcc aagagccccg
     2221 atggccgcta cgcctgcgac cacaatggcg tcatccctgt cgctgtgaag gccctgaaga
     2281 aggccttcgg gtccgacctc atcgtcatga ccgacgtctg cctctgcggc tgcaccagcc
     2341 acggccactg
//
LOCUS       DASUDT010000077         4530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_379441, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000077 DASUDT010000000
VERSION     DASUDT010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4530
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379441"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1135)
                     /locus_tag="VFV26_01650"
     CDS             complement(62..1135)
                     /locus_tag="VFV26_01650"
                     /inference="COORDINATES: protein motif:HMM:NF025094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEX4844890.1"
                     /translation="MAEAIHCPSCSTRYRLRAERLRPAIRRARCFSCGGVFPVGDVVQ
                     RLLAEAPAATASFGREVVDAALNHAPMAPPAPSSLTLGDLEGVDSEILEKTLVDLPSA
                     LPETKIEAIPAPPSPAPAPIVPEAGESTLTGSYSSARDAIDKLFAGAPAVAQSAKVPR
                     DPSAMDMEATLSALEATLGGASLSTPQPDSDTPTASGRLPGIGQTPATATVRLSQEDL
                     RAALRAGNPEEPSPSPLRTIPEEAQPEPAPAFVHAQVPEPVAGEDPGAEQLRLKIGEE
                     VYPGLTMTQLAAWVEEGRILEHHLVARQHSENWLEAHKVPGLRPVFERQRRERSGSSP
                     ILDPSSPDPAHKKSLFGGLFGKG"
     gene            1219..1884
                     /gene="tmk"
                     /locus_tag="VFV26_01655"
     CDS             1219..1884
                     /gene="tmk"
                     /locus_tag="VFV26_01655"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX4844891.1"
                     /translation="MRGVFITIEGVEGSGKSTQMLRLSERLRHLGLPLVVSKEPGGTA
                     LGRELRRLLLERHASGEAWCPDAELLLFYADRAQHLEMVIRPALAQGKVVLVDRFEDS
                     TRAYQGASGVSEASLDRLSELVLRGLRPNLTVLLDMDPEASLQRVEVRNLSLGAEFSE
                     TRFDEAALDFHRKVRNRFLVIAQSHPARVALVPARDPVEQVEAAIWARVAPLLRSAGF
                     VVD"
     gene            1884..2897
                     /locus_tag="VFV26_01660"
     CDS             1884..2897
                     /locus_tag="VFV26_01660"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844892.1"
                     /translation="MFAPEVVGHRAIRQRLLDRLQGGRIRGSLLFTGPEGIGKRRVAL
                     ELARREICLRRNACGQCEGCRMLLGEDLPFELPNLLRIAPEGKAGVIRIDQIREGLDS
                     SNQPRFSRGVIEWASLAPAVGCHRWIVVEEAHRLNESSGNILLKTLEEPPEGTHFILV
                     THRPEALLQTIRSRCERIPFAPLSPDEAWAVAARLGWAEAERPRWTALGEGSLRFLDE
                     AAFRRAEAQVEAWLALLVGRPFTEAGEALLPEKDSLLAQGEQLRQPLELLLRLLTDLA
                     RIRAGQTPALEPWRQALESLAAQPRNLRPPQEAALEALRHLPRNLSPEPLLREVGLAL
                     QGA"
     gene            2963..3205
                     /locus_tag="VFV26_01665"
     CDS             2963..3205
                     /locus_tag="VFV26_01665"
                     /inference="COORDINATES: protein motif:HMM:NF022143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2492 family protein"
                     /protein_id="HEX4844893.1"
                     /translation="MSEPLYGHDLLTLLMDKGGSCSLEDLRAASIAAHGASATYCNCH
                     GDSFDFDGVIAFLGHKGKIQVAGGTVTLGMAPACQH"
     gene            3301..4494
                     /locus_tag="VFV26_01670"
     CDS             3301..4494
                     /locus_tag="VFV26_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844894.1"
                     /translation="MDASLPKPPPRPFLLWLGVGLLAVNLFVAVMAGLSLRRSWRNHQ
                     ERAVATAHNLAQVLDRYVADTFRKADLAVLAIKDEVERPVTGSRSGRPDLDDFIRRQH
                     ERAPELLALRTTDAQGLIQHGSGPGMGTHANVSDREHFIRLRDDPQASLVISKPILGR
                     LTGTWVIILARRLEHADGSFEGMVQAVIALDQFGKVFSALDVGPRGSVALRDLDLRLV
                     ARHPEPLSAGTAIGQQNVSREFTSFAQSGQGLGTYRALTPFDQVQRTFAIRRIAGHPF
                     YLLVGLADQDYLAPWRAELAQEIAEVVLFAAMTLAGAWLMRRAWLRQQAAHEQLEGLL
                     AEVKTLGGMLPICSHCKKIRDDKGYWNQIEAYLNEHTDAEFTHGICPDCAKEVFPNSG
                     KHSAL"
BASE COUNT          659 a         1586 c         1608 g          677 t
ORIGIN      
        1 cggcgcagcg ggaggtgcct gggccaggca gaggagggcc gcaagggcga gggtctgcat
       61 gtcagccctt tccgaagagg ccgccgaaga ggctcttctt gtgcgcggga tcgggggagg
      121 acggatcgag gatgggactg ctgccgctcc gttcccggcg ctggcgctcg aagaccggcc
      181 gcaggcccgg aaccttgtgg gcctccagcc agttctcgct gtgctgacgc gccaccaggt
      241 ggtgctcgag gatgcgtccc tcctccaccc aggccgccag ctgggtcatg gtgaggcccg
      301 ggtagacctc ctctccgatc ttcaggcgaa gctgctcggc gcccggatcc tcacctgcaa
      361 ccggctctgg aacctgggcg tggacgaagg ctggcgcggg ttccggctga gcctcctccg
      421 gaatcgtcct caagggggaa ggggatggct cctcggggtt tccggcccgc agggcggctc
      481 gcagatcctc ctgggacagg cgaaccgtgg ccgtggccgg ggtctggccg atcccgggca
      541 gacggccgga ggcggtgggg gtatcgctgt cgggctgggg cgtggacagg ctggcgccgc
      601 ccagggtggc ctccagggcc gagagggtgg cttccatgtc catggccgag ggatccctgg
      661 ggactttcgc ggattgggcc acggcaggcg cgccggcgaa cagcttgtcg atggcgtccc
      721 gggccgagga gtagcttccg gtcagggtgc tttcgccggc ttccggcacg atgggcgcag
      781 gggcggggct ggggggtgct ggaatggcct cgatcttggt ctcggggagg gccgagggca
      841 ggtccaccag ggtcttttcc aggatctccg aatccacccc ctccagatcg cccagggtca
      901 gggaggaggg cgccgggggg gccatggggg catgattcag cgccgcgtcc acgacctccc
      961 ggccaaagct ggcggtggcg gctggcgcct cggccagcag gcgctggacc acgtccccca
     1021 cggggaacac accgccgcag gagaagcacc gggcccggcg gatggcaggc cgcagccgct
     1081 cggcgcgcag gcggtagcgg gtggagcagc tggggcaatg gatcgcttcg gccacctgga
     1141 actcctggag tttcaagcag gatagcactc cggccgggcg cggccaaacc gcgggtatcc
     1201 tcatcggacg gaggtccggt gcggggcgta ttcatcacca tcgaaggcgt ggagggttcg
     1261 gggaaatcca ctcagatgct gcggctttcc gagcggctcc ggcacctcgg ccttcccctg
     1321 gtggtgtcca aggaacctgg tggcacggcc ctgggccgcg aactgcggcg cctgctgctg
     1381 gagcggcacg ccagcggcga ggcctggtgc ccggatgccg aactgctgct cttctacgcg
     1441 gatcgcgccc agcacctgga gatggtgatc cggcccgcct tggcccaggg gaaggtggtg
     1501 ctggtggacc gcttcgagga ttccacccgg gcctaccagg gcgccagcgg agtctccgaa
     1561 gccagcctgg accgcctcag cgagctggtg ctgcggggcc tgcgccccaa tctcacggtc
     1621 ctgctggaca tggatcccga ggcctcgctc cagcgcgtgg aggtgcgcaa cctgtccctg
     1681 ggcgctgaat tctcggagac ccggttcgat gaggcggccc tggacttcca ccgcaaggtg
     1741 cggaaccgct tcctcgtcat cgcccagagc caccccgccc gggtggccct ggtgcccgcc
     1801 cgggatccgg tggagcaggt ggaagcggcc atctgggcgc gcgtggcgcc gctgctgcgc
     1861 agcgccggct tcgtggtgga ctgatgttcg cgccggaagt cgtcggccac cgcgccatcc
     1921 gccagcgcct gctggaccgg ctccaggggg ggcggatccg cggctcgctg ctcttcacgg
     1981 gccccgaagg catcggcaag cgccgcgtgg cgctggaact ggcccgccgc gagatctgcc
     2041 tccgccggaa cgcctgcggc cagtgcgaag gctgccgcat gctgctgggc gaggacctgc
     2101 ccttcgagct cccgaacctg ctgcgcatcg cgcccgaggg caaggcgggg gtgatccgca
     2161 tcgaccagat ccgggaaggc ctcgattcca gcaaccagcc ccggttcagc cgcggggtca
     2221 tcgaatgggc ctccctggcg cccgccgtgg gctgccaccg gtggatcgtg gtggaagagg
     2281 cccaccgcct caacgagtcc agcggcaaca tcctgctgaa gaccctggag gaaccccccg
     2341 agggcaccca tttcatcctg gtgacgcacc gccccgaagc gctgctccag accatccgca
     2401 gccgctgcga acgcatcccc ttcgcgcccc tcagtcccga cgaggcctgg gccgtggcgg
     2461 cccggctggg ctgggccgag gccgagcgcc cccgctggac ggccctgggc gaaggcagcc
     2521 tgcggttcct ggacgaggcc gccttccgcc gcgccgaggc ccaggtggaa gcctggctgg
     2581 ccctgctggt cgggcggccc ttcaccgagg cgggcgaggc cctgctgccg gaaaaggatt
     2641 ccctcctggc ccagggcgag cagctgcgcc agcccctgga gctgctcctg cgtctgctga
     2701 cggacctggc gcggatccgc gccggccaga ccccggccct ggaaccctgg cggcaggccc
     2761 tggaatccct ggcggcccag ccccggaatc tgcggccccc gcaggaggcg gccctggaag
     2821 ccctgcgtca cctgccccgg aacctcagcc ccgagccgct gctgcgggag gtggggctgg
     2881 cgctgcaggg ggcgtgatcc gaatcaccgg catccgggct aaactgagtt caggagtcga
     2941 gactcctgaa atggagcccg ccatgtccga acccctctac ggccacgacc tgctgaccct
     3001 gctcatggac aagggcggaa gctgcagcct ggaagacctc cgggcggcct ccatcgccgc
     3061 ccacggcgcc tcggccacct actgcaactg ccatggggac agcttcgact tcgacggcgt
     3121 catcgccttc ctgggccaca agggcaagat ccaggtggcc ggcggcaccg tgaccctggg
     3181 catggccccc gcctgccagc actgaacgaa gggtcgggac cgcccctgaa ccggtggacc
     3241 caggccaggt tgttgctagt ctctccaggc ggtccctggc gaccgctgga tgatatgccc
     3301 ttggacgcct ccctcccgaa acccccgccc aggcccttcc ttctctggct gggagtgggc
     3361 ctcctggccg tgaacctgtt cgtggcggtc atggcgggac tttccctccg gagaagctgg
     3421 cggaaccacc aggaacgggc ggtcgccacg gcccacaacc tggcccaggt gctggaccgc
     3481 tacgtggcgg acaccttccg caaggccgac ctcgcggtgc tggccatcaa ggatgaggtc
     3541 gaacggcccg tcacgggctc ccggagcggc cgccccgatc tggatgactt catccggcgg
     3601 cagcatgagc gggccccgga gctgctggcc ctccgcacca ccgacgccca gggcctgatc
     3661 cagcacggca gcggccctgg catgggcacc cacgccaacg tgtcggaccg ggagcatttc
     3721 atccgcctcc gggacgaccc ccaggccagc ctggtgattt ccaaacccat cctggggcgg
     3781 ctcacgggaa cctgggtgat catcctggcc cggcgcctcg aacatgcgga tggcagcttc
     3841 gagggcatgg tccaggccgt gatcgccctg gaccagttcg gcaaggtctt ttccgccctg
     3901 gatgtggggc cccgcggctc ggtggcgctg agggacctgg acctgaggct ggtggcccgg
     3961 catcccgagc ccctcagcgc ggggaccgcc atcggccagc agaacgtctc ccgggagttc
     4021 acgtccttcg cccagtcggg ccaggggctt ggcacctacc gggcccttac ccccttcgac
     4081 caggttcagc ggaccttcgc catccggcgc atcgccggcc accccttcta cctcctggtg
     4141 ggcctggccg atcaggacta cctggccccc tggcgggcgg agctggccca ggaaatcgcg
     4201 gaggtggtcc tgttcgccgc catgaccctg gcgggcgcct ggctcatgcg ccgggcctgg
     4261 ctccggcagc aggcggccca cgagcagctg gaagggctgc tggcggaggt gaagacgctg
     4321 ggcggcatgc tgcccatctg cagccactgc aagaaaatcc gcgacgacaa ggggtactgg
     4381 aatcagatcg aggcctacct gaacgagcac acggatgccg agttcaccca cggcatctgc
     4441 ccggactgcg cgaaggaggt ctttccgaac tccgggaagc actcggccct ttaggtttga
     4501 gtctggagtc cgccctacac tggtcccggg
//
LOCUS       DASUDT010000078         2044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1307256, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000078 DASUDT010000000
VERSION     DASUDT010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307256"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1842
                     /locus_tag="VFV26_01675"
     CDS             <1..1842
                     /locus_tag="VFV26_01675"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX4844895.1"
                     /translation="PTEGTYSFVYPTVVGPRYAGKAGTASSTGEPWVANPYTHAGEKP
                     ATTFDLEVRLSAGLPIQRMACDTHKTAIAYDGKAEATLRLDPSEAHGGNRDVIVKYQL
                     AGSAVQSGLLLHQGQEGNTFLLMAQPPKRVTPKDLPPREFVFIMDVSGSQMGFPIEVS
                     KTLMRSMIQGLRPQDLFNVMVFEGTSAFWSPSGSQHATPEATAQALAFVGSQHGGGGT
                     ELGSALRKALGLPRVPGISRTFVVSTDGYISADSQMFDLIRKNLGAANLFAFGIGSSV
                     NRHLIEGMARAGQGEAFVITKPEQAALEAERFRAYVSSPVLTNVKLTTNGFHAQNLEP
                     LQLPDVLADRPVICLGTWTGEARGTVTLSGMTAAGPWSQTFEVGQVKDRSHGALRQLW
                     ARQRIQALSDDDQFGADEGRKAEIIRLGLAHSLLTAHTSFVAVDTQVRNASGGSTTVT
                     QPLPLPEGVSDTAVGGMAGHAMAYAPAPMKMRYAASPAIAVEVMAQDQARQESRRMIQ
                     PEPKAAPSLRILAFSGITGTSDPASLRRELGARLKDPALLAALASLPPGTDLELKVDG
                     SGQVVAATFSQPFPGATRAKALIEAWRLRSWTGGLAGQLDLTLSFQP"
BASE COUNT          324 a          769 c          658 g          293 t
ORIGIN      
        1 ccgacggaag gcacgtacag cttcgtctac ccgaccgtgg tggggcctcg ctacgccgga
       61 aaggcgggca cggcctccag cacgggcgag ccctgggtgg ccaatcccta tacccacgcc
      121 ggggagaagc ccgccaccac cttcgatctg gaggtgaggc tgtccgcggg cctgcccatc
      181 cagcgcatgg cctgcgacac ccacaagact gccatcgcct acgatggcaa ggccgaggcc
      241 accctgcgcc tggaccccag cgaagcccac ggcggcaacc gcgatgtcat cgtgaagtac
      301 cagctggcgg gaagcgccgt gcagtcgggc ctgctgctcc accaggggca ggaggggaac
      361 accttcctgc tcatggccca gccgcccaag cgggtgacgc cgaaggatct gccgccccgg
      421 gagttcgtct tcatcatgga tgtctccggc agccagatgg gcttccccat cgaagtgtcg
      481 aagacgctca tgaggtcgat gatccagggc ctgcgtcccc aggacctctt caacgtcatg
      541 gtcttcgagg gcacctcggc cttctggtcg cccagcggat cgcagcacgc cacgccggaa
      601 gccacggcgc aggccctggc cttcgtgggg tcgcagcacg gggggggcgg cacggagctg
      661 ggcagcgccc tgcgcaaggc cctgggcctc ccccgggtgc ccggcatctc gcgcaccttc
      721 gtggtgtcca cggacggcta catcagcgcc gacagccaga tgttcgacct catccgcaag
      781 aacctgggcg ccgcgaacct cttcgccttc ggcatcggca gctccgtgaa ccgccacctc
      841 atcgagggca tggcgcgcgc gggacagggc gaggccttcg tcatcacgaa gccggaacag
      901 gccgcccttg aagcggagcg cttccgcgcc tacgtgtcct cgccggtgct caccaacgtg
      961 aagctcacca ccaacggctt tcacgcccag aaccttgagc ctctgcagct gccggacgtc
     1021 ctggcggacc ggcccgtgat ctgcctcggc acgtggaccg gcgaagccag gggaaccgtc
     1081 acgctctccg gcatgaccgc cgccggcccc tggagccaga ccttcgaggt gggccaggtg
     1141 aaggaccgca gccacggcgc cttgcgccag ctctgggccc ggcagcgcat ccaggccctg
     1201 tcggacgatg accagttcgg cgcggacgag ggccgcaagg cggagatcat ccgcctgggc
     1261 ctcgcccaca gcctgctcac cgcccacacc tccttcgtgg cggtggacac ccaggtgcgg
     1321 aacgccagcg gcggcagcac gaccgtcacc cagcccctgc ccctgcccga aggcgtgtcc
     1381 gacacggctg tgggcggcat ggccggccat gccatggcct acgcaccggc tccgatgaag
     1441 atgagatacg ccgcgtcccc cgccatcgcg gtggaagtca tggcccagga ccaggcccgc
     1501 caggaatccc gccgcatgat ccagcccgaa cccaaggccg cgccctcgct ccgcatcctg
     1561 gccttctcgg gcatcacggg cacctccgac ccggcctccc tccgccgcga actcggcgcg
     1621 cgcctcaagg atccggccct cctcgccgcc ctggcttccc tgccccccgg cacggatctg
     1681 gagttgaagg tggacggttc cggccaggtg gtggcggcga ccttcagcca gcccttcccc
     1741 ggcgccaccc gggccaaggc cctgatcgaa gcctggcgcc tgcggagctg gactggcggc
     1801 ctggccggac agctggacct cacactgagc tttcagccct gaattcaatg atttgaccta
     1861 cgcggatccc cggcttgccg gggatctgcg ctggcgttag aagccgggag gggtaccttc
     1921 gtacccatgc gaaggcacct gggagtggcc ttgatgctca ccttcggggc ttgtgatccg
     1981 gaacccgccc gtcccgccgc ccccctgccg gaggcggtcc atgcccaggc ccgggcgcgc
     2041 atgg
//
LOCUS       DASUDT010000079         2470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_600428, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000079 DASUDT010000000
VERSION     DASUDT010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600428"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VFV26_01680"
     CDS             <1..715
                     /locus_tag="VFV26_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844896.1"
                     /translation="GNVAITGGAGTSTPWVGSQAPFWNGIQGFNRTPSGQSAAVAWSP
                     GTAGVTSIAAPAGEVWLSFLSNRFSINAVLQAMESEGTLKIVSSPKVVTQNNKKATIL
                     SGEKIPYPTQQGGAAGGAITVAFIDANLQLDVTPQITNEGTIIMDIKLEKAEADFSRT
                     VNGTPTILRKMLETQMLVRDGGTAVLGGVYVTNTSKGQTGVPFLSKIPLLGFLFRRDA
                     KAEKNSELLIFITPRILRQ"
     gene            complement(778..978)
                     /locus_tag="VFV26_01685"
     CDS             complement(778..978)
                     /locus_tag="VFV26_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844897.1"
                     /translation="MAAISCTHCGADLTAPQSVRIAEYQFGRLEKTDEDPGFKYHFEQ
                     ADNFTILCNSCKRLVRTLPIAK"
     gene            complement(1004..1156)
                     /locus_tag="VFV26_01690"
     CDS             complement(1004..1156)
                     /locus_tag="VFV26_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844898.1"
                     /translation="MNPVELIVGGLALLFVIYVAYRIGKVLLRVLVGLAVLALLSWGL
                     WKLFHT"
     gene            complement(1153..2022)
                     /locus_tag="VFV26_01695"
     CDS             complement(1153..2022)
                     /locus_tag="VFV26_01695"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4844899.1"
                     /translation="MKGVLAILGPGTLGLSAAQWAAECGLEVRLLGRDGDHARRGIQE
                     VERRWDSALRKGTMAPEDLARARSLIRAGAFGPAALEDVSILLEALPESSDQKVPALA
                     SAVAWGNADLLLLSGTSALPIAGLAQSSGTRERLLGFHLFVPVPRMALVELAVPEGAP
                     ESLVARARALGAALRKRVVTVKDQPGFAAARMALAQGLEAMRLLEAGAASAEDLDALM
                     TLGYGHPVGPLELSDRIGLDLRLRIAEGLSSATGDPRFEPPRLLREKVARGETGRKSG
                     RGFFRWDGQGRRL"
     gene            complement(2019..>2470)
                     /locus_tag="VFV26_01700"
     CDS             complement(2019..>2470)
                     /locus_tag="VFV26_01700"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4844900.1"
                     /translation="SVTLAYRGSEFAKANEVNRKILQDLEASQQATVWRNADIAALRD
                     TGEKPRIEATFKDGRSARFDHVVFALGGATPEGFLRQAGVELDGKHPRVDHRFHSTVP
                     GLFLAGDLVAGGKGSIVKAFNTGRAVVWEGLCQDHLECRIPDAGNGL"
BASE COUNT          436 a          863 c          793 g          378 t
ORIGIN      
        1 cggcaatgtg gccatcaccg gcggggccgg caccagcacc ccctgggtgg gcagtcaggc
       61 tcccttctgg aacggaattc agggcttcaa ccgtacgccc tcaggtcagt cggccgccgt
      121 ggcctggtca cctggcacgg ccggcgtgac ctccatcgcc gctcccgcgg gtgaagtctg
      181 gctctccttc ctcagcaacc gcttcagcat caacgcagtc ctgcaggcca tggaatccga
      241 gggtaccctc aagatcgtgt cgtccccgaa ggtcgtgacc cagaacaaca agaaggccac
      301 catcctcagc ggcgagaaga tcccctatcc cacccagcag ggcggggccg ccggcggcgc
      361 catcacggtc gccttcatcg acgcgaacct ccagctcgat gtgacgcccc agatcaccaa
      421 cgagggcacc atcatcatgg acatcaagct ggagaaggcc gaggccgatt tcagccgcac
      481 cgtgaatggc acccccacca tcctccgcaa gatgctcgaa acccagatgc tcgtgcggga
      541 tggcggcacg gcggtgcttg gcggcgtcta tgtgacgaac accagcaagg gccagaccgg
      601 ggttcccttc ctttccaaga tccccctcct gggcttcctc ttccggcgcg atgccaaggc
      661 cgagaagaac agcgaactgc tgatcttcat cacgccgcgc atcctgcgcc aatagtccag
      721 tcccccacac aaggaaacgg ccccgatcgg ggccgtttcc ttgttgggat gaaaaaacta
      781 cttggcgatg ggaagggtgc ggacgaggcg cttgcagctg ttgcagagga tggtgaagtt
      841 gtccgcctgc tcgaagtggt acttgaaccc gggatcctcg tcggtcttct ccaggcggcc
      901 gaactggtac tcggcgatgc gcacgctctg gggggcggtc agatcggcgc cgcaatgggt
      961 gcaggaaatg gcggccatgc ttgctcctcg ggaggcttgg gattcaggtg tggaacagtt
     1021 tccagagccc ccagcttagc agagccagaa cggcgaggcc caccaagacc cgcagcagca
     1081 ccttgccgat ccgatatgcg acatagatca cgaagaggag ggcgaggccg cccacgatga
     1141 gttcaaccgg attcacagac gcctcccttg tccatcccag cgaaagaaac cccggcccga
     1201 cttccggccg gtttcgccgc gggccacctt ctcgcggagc aggcggggcg gctcgaatcg
     1261 cgggtcaccg gtggccgatg acaggccctc ggcgatgcgc aggcgcaggt ccaggccgat
     1321 gcggtccgag agctccaggg gccccacggg gtgcccgtaa cccagggtca tgagggcatc
     1381 gagatcctcg gccgaggcgg caccggcctc cagcagccgc atggcctcca gtccctgggc
     1441 cagggccatg cgggccgccg cgaaacccgg ctggtccttc acggtcacca cccgcttgcg
     1501 caaggccgct cccagggccc tggcccgggc caccagagat tccggcgcgc cctctggcac
     1561 cgcgagctcc accagggcca tcctgggcac gggcacgaag aggtggaaac ccagcagccg
     1621 ctccctggtt ccgctggatt gcgccaggcc tgcgatgggc agggccgagg tgccggagag
     1681 cagcagcaaa tccgcgttcc cccaggccac agccgaggcc agggccggaa ccttctggtc
     1741 cgaggattcc ggaagggcct caaggaggat ggaaacgtcc tccagggctg cggggccgaa
     1801 agccccggct cggatcaggc tccgggcccg cgccaggtcc tccggcgcca tggttccctt
     1861 gcggagggcg gaatcccagc gccgctccac ttcctggatg ccccgccggg catggtcccc
     1921 atcccggccc agcaggcgca cctccagtcc gcactccgcc gcccattggg ctgcggacag
     1981 gcccagggtt ccggggccaa ggatggccag gacgcctttc aaaggccgtt cccggcatcc
     2041 gggatccggc attccagatg gtcctggcag agaccctccc acaccacggc gcgccctgtg
     2101 ttgaaggcct tgacgatgga tcccttgccc ccggccacca ggtctcccgc cagaaagagg
     2161 cccggcaccg tggaatggaa gcggtggtcc acccgggggt gcttgccgtc caactcgacg
     2221 cccgcctggc gcaggaagcc ctccggcgtg gccccgccca gggcgaatac cacatggtcg
     2281 aagcgggctg accggccgtc cttgaacgtg gcttcgatcc ggggtttctc tcctgtatcc
     2341 cgcagagcgg cgatatcggc gttccgccag acggtggcct gctgggaggc ctccaggtcc
     2401 tggaggatct tccggttcac ctcgttggcc ttggcgaatt cggagccgcg ataggccagg
     2461 gtcacggagc
//
LOCUS       DASUDT010000080         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1439984, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000080 DASUDT010000000
VERSION     DASUDT010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1439984"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1753
                     /locus_tag="VFV26_01705"
     CDS             <1..1753
                     /locus_tag="VFV26_01705"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX4844901.1"
                     /translation="PIQSLHLDAAQTLIEAQPIAATSAPTPAPGAPYRAKLLAEAPEP
                     PKPRPTVAKAQVAKDRYGRESIQPPLPLTEPTPSRPLPALPAAPDPGPVSRETLPPRR
                     LFDPPGQHAKVDLAMLEIIKERIGQKLSEFKIKGAVTGMQPGPVVTVFEFQPDAGIPL
                     SRILGMEEDLALALQAEAVRMDRIPGKNLVGIEVPNPKREIITFREVIDSPAFRDAGG
                     LLHLALGKDIAGKPVVADLNKMPHLLIGGSTGSGKSVGVNAMICSCLVRAMPDEVKLI
                     LVDPKMVELGVYEDIPHLWAPVVTDMKEAGRVLKWVVAQMEDRYRRLALLSVRDLKGF
                     NAKIAEAGGSMDLTDRTPNPRWPDRPAVLEHLPYVLVVIDELADLMMVARSEVEDSIA
                     RIAQKARAVGIHLILATQRPSVDVVTGVIKANLPSRLSYRVRTKIDSRTILDCGGGEQ
                     LLGAGDALFLPNGASHPKRIHAPFLSEEETLRLVTWLRERGRPDYNQALISAMEAEEE
                     TALFDEADMGGGDDIYVRALAVVRRERKASTSLLQRKLNLGYGRAARLIDRMEEEGIV
                     GPDRGAGKPREVLVEAE"
BASE COUNT          382 a          718 c          653 g          253 t
ORIGIN      
        1 gcccatccag tccctgcatc tggacgccgc ccagaccctg atcgaagccc aacccatcgc
       61 cgccacctcc gcgccgacac ccgcgcccgg cgccccctac cgggccaagc tgctggcgga
      121 agcgccagaa ccgccgaagc cccggcccac ggtggccaag gcccaggtgg cgaaggaccg
      181 ctacggccgg gagagcatcc agccgcccct gccgctcacg gagcccaccc cttccaggcc
      241 cctgcccgcc ctcccggcgg cgcccgaccc ggggcccgtc agccgcgaaa ccctgccgcc
      301 ccgccgcctc ttcgatccgc cgggccagca cgccaaggtc gacctggcca tgctggagat
      361 catcaaggaa cggattggac agaaactgtc cgagttcaag atcaagggcg ccgtcaccgg
      421 catgcagccg ggccccgtgg tcacggtctt cgagttccag ccggatgccg gcatcccgct
      481 ctcccgcatc ctgggcatgg aggaggatct ggcgctggcc ctccaggccg aggccgtgcg
      541 catggaccgc atccccggca agaacctggt gggcatcgaa gtgcccaacc ccaagcggga
      601 aatcatcacc ttccgcgagg tcatcgacag ccccgccttc cgcgacgccg gcggcctgct
      661 gcacctggcc ctgggcaagg acatcgccgg caagcccgtg gtggccgatc tcaacaagat
      721 gccccacctg ctcatcggcg gcagcaccgg cagcggcaag agcgtgggcg tgaacgccat
      781 gatctgctcc tgcctcgtgc gcgccatgcc tgacgaggtg aagctcatcc tggtggaccc
      841 gaagatggtg gaactgggcg tctacgagga catcccgcac ctctgggccc ccgtcgtgac
      901 cgacatgaag gaggcgggcc gcgtcctcaa gtgggtggtc gcccagatgg aggaccgcta
      961 ccgccgcctg gccctgctca gcgtgcgcga cctgaagggc ttcaacgcca agatcgccga
     1021 ggcgggcgga tccatggacc tcacggaccg gacgcccaac ccccgctggc cggaccgccc
     1081 cgccgtgctg gagcatctgc cctacgtgct cgtggtcatc gacgagctgg cagacctcat
     1141 gatggtggcc cgcagcgagg tggaggacag catcgcgcgc atcgcccaga aggcccgggc
     1201 cgtggggatc cacctcatcc tcgccaccca gcggcccagc gtggacgtgg tcaccggtgt
     1261 catcaaggcc aacctgccca gccgcctcag ctaccgcgtg cgcaccaaga tcgacagccg
     1321 caccatcctg gactgcggcg gcggcgagca gctgctgggc gcgggcgatg cgctcttcct
     1381 gcccaacggc gccagccatc ccaagcgcat ccacgccccc ttcctcagcg aggaggagac
     1441 cctccgcctc gtcacctggc tgcgcgagcg gggccgcccc gactacaacc aggccctcat
     1501 cagcgccatg gaggcggaag aggagacggc cctgttcgac gaggcggaca tgggcggcgg
     1561 ggatgacatc tacgtgcgcg ccctcgccgt ggtgcggcgc gagcggaagg ccagcaccag
     1621 cctcctccag cggaagctca acctcggcta tggccgggcc gcgcggctca tcgatcgcat
     1681 ggaggaagag gggatcgtgg gaccggaccg gggcgcaggg aagccgcggg aagtgctggt
     1741 cgaggcggaa tagtcccgag ggtgtgggct ctacttccag ctctaaagag ctggaacgca
     1801 gaggacacag aaacgcacag aggacgcaga gaaaagcaaa aggccattcg tgcttattgg
     1861 cgagcctcag cctggaagtg tgaaaccgca gaaaccgtag atgccgcaga tgggcacaga
     1921 tgggcacaga aaaggcatcc ataagcggag gtttgcggag gagccgagga aagcagagga
     1981 aaagaaaatg cacctggcac tccagc
//
LOCUS       DASUDT010000081         2406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1572637, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000081 DASUDT010000000
VERSION     DASUDT010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572637"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /gene="asd"
                     /locus_tag="VFV26_01710"
     CDS             complement(<1..987)
                     /gene="asd"
                     /locus_tag="VFV26_01710"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF006416.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX4844902.1"
                     /translation="MTAKIPVTVLGATGVVGQRFVRRLANHPLFRVEHLAASERSAGK
                     RYRDACAWRLDGEPYGGLGDQVMAEGTPEFALSPVVFSALDTAPAQELEPAFARAGAM
                     VFSNAAAFRMSPEVPLLVPEVNAAHLGLLDIQRHHHGWTGGIVTNANCTATVLVMALA
                     PLQAAFGIEAVMMTSMQAISGAGYPGVASLDILGNVIPFIRNEEPKVEEETPKMLGRF
                     TGREVELAPMAVSALCHRVPVLEGHTEAVSVKLKDNPSLEDVRQAWLAWRPEPQRLRL
                     FSAPPVPIHVHTLEDRPQVRRDVEADEGMSVHVGRLRPCPILGVKFALLGHNT"
     gene            complement(991..2025)
                     /locus_tag="VFV26_01715"
     CDS             complement(991..2025)
                     /locus_tag="VFV26_01715"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX4844903.1"
                     /translation="MNATPADLRSWLASSLQSLCACETTSGREDAGLPALRTLLRDLG
                     ATLHEQPVAGGRTNVLATWGRPRVLFSTHLDTVPPFLPPRLEGDTLHGRGACDAKGQI
                     VAQLGAVKSLLAEGREGLAWLGVVGEETDSAGARAALGLADRLQDLRALINGEPTELK
                     LATGQRGAQHLCLHCLGKAAHSGSPELGHNATWPLLDWLQRLREQPRPVDPQLGPEVW
                     NLGLLQAGESPNTVPAGAEALLMARTVPGSTFAEEARRLAPPEGTVDLRLDEPPDRYP
                     EVPGFEHAAMPFGSDAPTLRALVPDGTVVLAGPGSISVAHTLEEHITLAELEAGVGLN
                     RRLALHFLGD"
     regulatory      complement(2087..2262)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00168"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Lysine riboswitch is most abundant in Firmicutes
                     and Gammaproteobacteria where they are found upstream of a
                     number of genes involved in lysine biosynthesis, transport
                     and catabolism; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="lysine"
                     /db_xref="RFAM:RF00168"
BASE COUNT          312 a          878 c          875 g          341 t
ORIGIN      
        1 agtgttgtgg cccagcagcg cgaacttcac gcccaggatg gggcagggcc gcaggcgtcc
       61 cacgtggacg ctcatgccct cgtccgcctc cacgtcgcgg cgcacctggg gccggtcctc
      121 cagggtgtgg acatggatgg ggaccggcgg cgccgagaag agcctcaggc gctggggttc
      181 gggcctccag gccagccagg cctggcgcac gtcctccagg gaggggttgt ctttcagctt
      241 cacgctcacg gcctccgtgt ggccctcgag gacgggcacc cggtggcaga gggcgctcac
      301 cgccatgggg gccagctcca cttccctgcc cgtgaagcgg cccagcatct tgggggtctc
      361 ctcctccacc ttgggctcct cgttccggat gaaggggatc acgttgccca ggatgtccag
      421 gctggccaca ccgggataac ccgcgccgct gatggcctgc atggaggtca tcatcaccgc
      481 ctcgatgccg aaggccgcct gcagcggcgc cagggccatc accagcaccg tggcggtgca
      541 gttggcgttg gtgacgatgc ccccggtcca gccgtggtga tggcgctgga tgtccagcag
      601 ccccaggtgg gcggcgttca cctcgggcac cagcaggggc acctccggcg acatgcggaa
      661 ggccgcggcg ttggagaaca ccatggcccc cgcccgggcg aaggcgggct ccagctcctg
      721 ggccggcgcc gtgtccaggg cgctgaacac cacgggcgac agggcgaatt ccggcgtgcc
      781 ctcggccatg acctggtcgc ccaggccgcc gtagggctcg ccatccaggc gccaggcgca
      841 ggcgtcgcgg tagcgcttgc ccgcgctgcg ctcgctggcg gcgaggtgct ccacgcggaa
      901 aaggggatgg ttcgccaggc ggcgcacgaa tcgctggccg acgacgccgg tggcgcccag
      961 gacggtgacg gggattttcg cggtcatggt tcagtctccc aggaagtgca gggccaatcg
     1021 gcggttgagg cccacgcccg cctccagttc ggcgagggtg atgtgttctt ccagcgtgtg
     1081 cgccacgctt atgctcccgg ggcccgccag caccaccgtg ccgtccggca ccagggcccg
     1141 cagggtgggc gcgtccgatc cgaagggcat ggccgcatgc tcgaagcccg gcacctctgg
     1201 atagcgatcc gggggctcgt ccaggcgcag gtccacggtg ccctccgggg gcgccaggcg
     1261 ccgcgcctcc tccgcgaagg tgctgcccgg cacggtccgg gccatgagga gggcctccgc
     1321 ccccgcgggc acggtgttgg gggattcgcc cgcctgcagc aggcccaggt tccacacctc
     1381 gggccccagc tgggggtcca cgggccgggg ctgctcccgc aggcgctgga gccagtccaa
     1441 caggggccag gtggcgttgt ggcccagctc cgggctgccg ctgtgggcgg ccttgcccaa
     1501 acaatgcagg cagaggtgct gggcgccccg ctggcccgtg gccagcttca gctccgtggg
     1561 ctccccgttg atgagcgccc gcagatcctg caggcggtcc gccaggccca gggccgcccg
     1621 ggccccggcg ctgtcggtct cctcgcccac cacgcccagc caggccaggc cttcgcggcc
     1681 ctcggccagg agggacttca cggcccccag ctgcgccacg atctggccct tggcatcgca
     1741 ggcgccgcgg ccgtgcagcg tatccccctc cagccggggc gggaggaagg gcggcaccgt
     1801 gtccaggtgg gtggagaaca gcacccgggg acggccccag gtggccagca cgttggtgcg
     1861 gcccccggcc acgggctgct cgtggagggt ggcgcccaga tcccgcagca gcgtgcgcag
     1921 cgccggaagg cccgcgtcct cccggcccga ggtcgtttcg caggcgcaga gggattggag
     1981 gctgctcgcg agccagcttc ggagatcggc gggggtggcg ttcatggaaa cctcggcggg
     2041 ccgacggtgc catcaggaac gcggtggggt gggtcccgcc gccgcgcctc aggccctccg
     2101 cgccgggtga ccggcacgac agccgccggg ctttcgcctc gacgtccagg ggccgcgccg
     2161 atgattcgcg aacccttcgg cgatcctccc ctttcccacc gggtcatcgg gttcatcccc
     2221 ctcgccgccg gtactgatgg ggaccgctcc tccatcggaa ggtccacctt cccatgggcg
     2281 acgcccttcc gcaagccgct cccgctcagg cccttcccgc gggcaccagg gcatcggcca
     2341 ggtggcgcac gaagccgctg aggtccgtca cgtccttcac ggcccggggc gtggcgcgca
     2401 gcagct
//
LOCUS       DASUDT010000082         3817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1639010, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000082 DASUDT010000000
VERSION     DASUDT010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639010"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1650
                     /locus_tag="VFV26_01720"
     CDS             <1..1650
                     /locus_tag="VFV26_01720"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4844904.1"
                     /translation="LQEAQDADGALVAARRAVALAPRHAEARAHLGLLLFQFSQKDPA
                     RAPEAARELRVAAGLLPQDPELWARLGEVSEQLKDNEGALRAWLRLGRLRPGFMAAWE
                     RAAIHARALQNYEGRRESVLALNARNPEARHLRMLEDLARDQVQAGYLAHAEEGFLLL
                     ARHLPEEAGLWENVALVRLQTSRFAEALESLEKAEALSPSSRIAFNTARALMNLGRFP
                     EAEARLAGLLAGKIEDAGIADGSQALYAEALLLQGKGGALLAYLKNHPGRPRVAGELQ
                     VFTCQALIARNDWKSALAALKDGIARFPKVPFFQQAAALPPEHLEYRFFSRKGTRTAL
                     EQLHQEGMASIWSEFQRWDKCLEAIDKARALGPIQGVDTLIMQSSAYDQVGRHADSLR
                     VLREAQKADPDNPMVQNNLGYLLLERDLNLEEAAALIEASAKATPDNGNVLDSLGWVQ
                     FKLGKIAEAEATLRRAAELSPFSPEVRKHLGEVLVKQGKLLEATEQWERALAFVFPDR
                     AALEKRLSELRIRLAKEQARKAEDPQAPLPDSTPDDDEEHP"
     gene            1647..2111
                     /locus_tag="VFV26_01725"
     CDS             1647..2111
                     /locus_tag="VFV26_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844905.1"
                     /translation="MMPLQVPPAMMAPAPAETVRAQYGWGYAGSDGEGTGTLNLLMEP
                     GSGRLVAELHGMGERLMLLEGDRASGYRLQVPRQKVDLRAATLAELPLPFLPQVASVE
                     ALLRLLRTGEGPGVSVLKKDGTGPRKLHWRGRDHRGKDEQVWMDRKRWEEGK"
     gene            complement(2208..3086)
                     /gene="lepB"
                     /locus_tag="VFV26_01730"
     CDS             complement(2208..3086)
                     /gene="lepB"
                     /locus_tag="VFV26_01730"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX4844906.1"
                     /translation="MAADTAPGKTTDIEIELPPGAAKGAVRDNLEVICFAMVLILFFK
                     AFVGQQFKIPSASMRNTLMIGDHLLANKFIFARPQWAWEEALFPMRSVQRGDIIVFRW
                     PIDRDQDYVKRCVAKEGDTVEMRNKRLYVNGRQVTGPFEHMFGRSPEGPTPGPWPVTR
                     NAGEAESPVGLWRHADPEVLALHERNQMQAMNSLRQDGFKDNLGPVTVPPGHVFAMGD
                     NRDNSEDSRYWGFLPVDHLRGRPFMVWWSFREGDTDNDNGRVPTGPTDVAADFIDAAR
                     HFFTRTRWERTGTIPE"
     gene            complement(3108..>3817)
                     /locus_tag="VFV26_01735"
     CDS             complement(3108..>3817)
                     /locus_tag="VFV26_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844907.1"
                     /translation="ARALGARHGDLAVRAHGEVQQGPPVMRRGTALRRCPALLAPAVL
                     LLALACQSRSAQPVYGPWEEGLTLIFEDPSLPQPERMSDRLQVRVAQSSMAPGAPRLV
                     RLDLANVRGQASLWVRHQDGGIALLGEDGRVVAQTLPPGFPATAAWQDRGTQFSVVGR
                     AAWEGAGILPSTSDPVGVWVEAQPAHGPRRRTLYLPNLGEVESLEERGGAWVAVNRLV
                     GRGFVDLPSIPPSNQRP"
BASE COUNT          575 a         1285 c         1416 g          541 t
ORIGIN      
        1 ctgcaggagg cccaggatgc cgatggcgcc ctggttgccg cccgccgggc cgtggccctc
       61 gcgccgaggc atgcggaagc gcgggcccac ctgggccttc tgctgttcca gttctcgcag
      121 aaggatccgg ccagggcgcc ggaggccgcc agggaactgc gggtggcggc gggtctgctg
      181 ccccaggatc ccgagttgtg ggcgcgcctg ggcgaagtct ccgagcagct gaaggataac
      241 gagggcgccc tccgggcctg gctgcgcctg ggcaggctcc ggcccggatt catggccgcc
      301 tgggagcggg ccgccatcca cgcccgggcc ctgcagaact acgagggacg gcgggaatcg
      361 gtgctggcgc tcaatgcccg gaatcccgaa gcccgccacc tccgcatgct ggaggacctg
      421 gcgcgggacc aggtccaggc gggctacctg gcccatgcag aggagggctt cctgctgctg
      481 gcccggcacc tgccggagga ggcgggcctc tgggagaacg tggccctggt gcggctccag
      541 acctcgcgat tcgcggaggc cctggaaagc ctggagaagg ccgaggccct cagcccctcg
      601 tcccggatcg ccttcaatac cgcccgtgcg ctcatgaacc tcgggcgctt cccggaggcg
      661 gaggcccggc tggcggggct gctcgccggg aagatcgagg acgccgggat cgcggacggc
      721 tcccaggccc tgtacgcgga ggccctgctg ctccagggca agggcggcgc cctgctggcc
      781 tacctgaaga accatcccgg ccggccccgg gtggcggggg agctgcaggt gttcacctgc
      841 caggcgctca tcgcccgcaa cgactggaag agcgccctgg ctgcgctgaa ggacggcatc
      901 gcccgcttcc ccaaggtgcc cttcttccag caggccgcgg cgcttccgcc cgagcacctg
      961 gaataccgct tcttctcgcg gaaggggacc cgcacggccc tggagcagct gcaccaggag
     1021 ggcatggcgt ccatctggtc cgagttccag cgctgggaca agtgcctgga ggcgatcgac
     1081 aaggcccgcg ccctgggccc catccagggc gtggatacgc tgatcatgca gagcagcgcc
     1141 tacgatcagg tggggcgcca cgccgactcc ctgcgggtgc tgcgggaggc gcagaaggcc
     1201 gatccggaca atcccatggt gcagaacaac ctcgggtacc tgctgctgga gcgggacctg
     1261 aacctggagg aggccgcggc cctcatcgaa gccagcgcca aggccacgcc ggacaatggc
     1321 aacgtgctgg acagcctggg ctgggtccag ttcaagctgg ggaagatcgc cgaggccgaa
     1381 gccaccctcc gccgcgccgc ggaactgagc cccttcagcc ccgaagtgcg caagcacctg
     1441 ggggaggtcc tggtgaagca gggcaagctg ctggaagcca ccgagcagtg ggagcgggcc
     1501 ctggccttcg tcttcccgga ccgtgcggcc ctggagaagc gcctgagcga actccgcatc
     1561 cgcctggcca aggagcaggc ccggaaggcc gaggatccgc aggcgcccct tcctgattcc
     1621 acaccggatg acgacgagga gcacccatga tgccgctcca ggtgcctccc gccatgatgg
     1681 cccccgcgcc cgcggagacg gtccgggccc agtacggctg gggctatgcc ggttccgatg
     1741 gcgaagggac cggcacgctg aacctgctga tggagcccgg ctccggccgc ctggtggcgg
     1801 aactgcacgg gatgggcgag cgcctgatgc tcctggaagg ggatcgcgcc tcgggctacc
     1861 ggctgcaggt gccccggcag aaggtggatc tgcgggccgc caccctggcg gagctgccct
     1921 tgcccttcct gccccaggtg gccagcgtcg aggccctgct gcgtctcctc cgcaccggcg
     1981 aggggccggg cgtctccgtg ctgaagaagg acgggacggg cccccggaag ctccattggc
     2041 ggggcaggga tcaccgcggt aaggacgagc aggtgtggat ggaccgcaag cggtgggaag
     2101 aggggaagta ggctctcatc gtcccttccc gctgaaatcg ccgcgaacgc ggcgatttca
     2161 gctcaccggc ttcgccggaa cggcaggtca gctgcttgga ttcccggcta ctccggaatg
     2221 gtcccggtgc gctcccagcg ggtgcgggtg aagaagtggc gggcggcatc gatgaagtcc
     2281 gcggccacat ccgtggggcc ggtgggcacg cggccattgt cgttgtccgt gtcgccctcg
     2341 cggaagctcc accagaccat gaagggccgt ccccgcaggt ggtccacggg caggaagccc
     2401 cagtaccggc tgtcctcgct gttgtcgcgg ttgtcgccca tggcgaagac atgtccgggg
     2461 ggcaccgtga cggggcccag gttgtccttg aaaccgtcct ggcggaggct gttcatggcc
     2521 tgcatctggt tgcgctcatg gagggccagc acctcgggat ccgcgtggcg ccagaggccc
     2581 acgggggact cggcctcgcc ggcgttgcgg gtgaccggcc aggggcccgg cgtggggccc
     2641 tcggggctgc gcccgaacat gtgctcgaag gggcccgtca cctgcctgcc gttcacgtag
     2701 aggcgcttgt tgcgcatctc cacggtgtcg ccctccttgg ccacgcagcg cttcacgtag
     2761 tcctggtcgc ggtcgatggg ccagcggaac acgatgatgt cgccgcgctg cacgctccgc
     2821 atggggaaca gggcctcctc ccaggcccac tggggccggg cgaagatgaa cttgttggcc
     2881 agcaggtggt cgccgatcat cagcgtgttg cgcatggagg ccgaggggat cttgaactgc
     2941 tggcccacga aggccttgaa gaagaggatc agcaccatgg cgaagcagat cacttccagg
     3001 ttgtcccgca ccgcgccctt ggcggcgccc gggggcagct cgatctcgat gtcggtggtc
     3061 tttccgggtg cggtgtcagc ggccatgtcg gctccgggaa tggtcgatca gggacgttga
     3121 ttcgagggag ggatggaagg caggtccacg aagccgcggc cgacgaggcg attgacggcg
     3181 acccaggcgc cgccccgttc ttccagcgat tccacttcgc cgaggttggg caggtagagg
     3241 gtgcggcggc gggggccgtg ggccggctgg gcctccaccc acacgcccac ggggtcggag
     3301 gtggacggca ggatgccagc gccttcccag gcggcgcggc ccaccacgct gaactgggtg
     3361 ccccggtcct gccacgccgc ggtggcgggg aaacccggcg gcagcgtctg ggcgaccacg
     3421 cggccgtcct cacccaggag ggcgatgccc ccgtcctggt gccggaccca caggctggcc
     3481 tgcccgcgga cgttggcgag atcgagccgc accaggcggg gcgcgccggg cgccatggag
     3541 gactgggcca cgcgcacctg caggcggtcg gacatccgtt cgggctgggg cagggaggga
     3601 tcctcgaaga tcagggtcag gccctcctcc cagggcccgt agacaggctg ggcggagcgg
     3661 gactggcagg ccagcgccag gagcaggacc gcgggagcca gcagggccgg gcaccttcgc
     3721 agggcggttc cccggcgcat caccgggggc ccttgttgaa cttcgccatg agctcggaca
     3781 gcgaggtccc cgtggcgggc accgagggct cgcgctt
//
LOCUS       DASUDT010000083         4413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1241479, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000083 DASUDT010000000
VERSION     DASUDT010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241479"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VFV26_01740"
     CDS             complement(<1..770)
                     /locus_tag="VFV26_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX4844908.1"
                     /translation="MSEVGANYVAPLQQLLKTMVEYGGTDLHITTESAPQIRIDGRMV
                     PLKLPPMDASQTRWLCYGVMTDQQKHRLEEDLEVDFSFGLQGVARFRANVFNQRGATA
                     GVFRTIPENIRSFDQLGLPPSIQALCDKPRGLVLVTGVTGSGKSTTLAAMVDKINTEE
                     PVHILTIEDPVEYVHKHKRALVNQREIHADTHSFKKALRSALRQDPDVVLVGEMRDLE
                     TIESALTIAETGHLTFGTLHTNSAAQTINRIVDVFPAH"
     gene            complement(825..1232)
                     /locus_tag="VFV26_01745"
     CDS             complement(825..1232)
                     /locus_tag="VFV26_01745"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4844909.1"
                     /translation="MLVMPEGHATDELSGRVIGAAMRVHSVLGPGFTESVYQNALALE
                     MALDGIPFEREVKLEVRYRGELVGQYRADLLVNGVLILELKAVQAVLPEHEVQVVNYL
                     AATGLEQALLLNFGTRSLQVKKKFRTPRQPESC"
     gene            complement(1311..3161)
                     /locus_tag="VFV26_01750"
     CDS             complement(1311..3161)
                     /locus_tag="VFV26_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEX4844910.1"
                     /translation="MVSKLGEMLVKAQLITDAQLEEVVKIQRREGGKLGSIVVRQGFC
                     SDQDIVSFLGMQYGVPAADLEQWPPIDAGVIALIPKDLAQRHKVLPLQRTGNVLTLAM
                     SDPTDIFAMDDVRFHTGYNVDPVVSSEMGLVRAVEKYYGGASAVRLADGMGSRTTSGG
                     NAGSGAAAAGPTSTTGIAQPFNEQDEQFDLSELEQELDADAEFDTTDDDEESINVGAL
                     KRGSEDAPVVKLVNMVLIDAIKRGASDIHIEPYEKNYRIRFRIDGILMEVMRPNLKLK
                     DPLTSRVKILAKLNIAEKRLPQDGRIKLRVNMGGRQKVIDYRVSILPTLFGEKIVLRL
                     LDSDKLMLDLTKLGFEQESLDRWDRQISKPYGMVLVTGPTGSGKTNTLYSSIAKLNTV
                     DTNIITAEDPVEFNFPGINQVQMKEQIGLNFAAALRSFLRQDPNIILVGEIRDFETAE
                     IAIKASLTGHLVLSTLHTNDAPSTINRLMNMGVEPFLVATSVNIICAQRLVRRLCASC
                     KAVDTHHQPEEALVSVGFTPEEIRKGITFYKPVGCETCNKRGYKGRVGLYEVLEMSET
                     LKDMILTGASAIELREQAQKEGMITLRRSGCRKVLDGVTTIEEIIRETVL"
     gene            3242..>4413
                     /locus_tag="VFV26_01755"
     CDS             3242..>4413
                     /locus_tag="VFV26_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844911.1"
                     /translation="MPLSGTPPQRLMAARQLIREKGLSRTDLTLLEDILKEGAGDLDP
                     LLEAPPREPPSGGESPAQADLRRSLGLFLAFLHQFSPRRLGEARASMGQVMQHSLARL
                     GHLAEAAHREMMVEQAQPAWVVLVLDLLASLRVMAPPLGEEDGTLRALWAAFLEDHRE
                     SFRQILAALQQRDTGPETVARLNAQMKVVNRAIQGKGRLEESLARLAEQLEGCIPPDI
                     HARVEPLILLQHVISNLRLSLMRPLDRGIHWPAVEQVRGSLRWLWDHLGWVLPRMDAG
                     LFQERMPAELRRLLQNLRRENPAAFSVVARALASHISLLGLLESLEPALGADTRERYA
                     AVPTFLVVESELGRMSDRTYDPGRAPLLDPEHPEVPRLRAYLRQAVLSLRQDQGTLR"
BASE COUNT          697 a         1425 c         1457 g          834 t
ORIGIN      
        1 tggtgggccg ggaacacgtc cacgatgcgg ttgatggtct gcgcggccga gttcgtgtgc
       61 agggtgccga aggtgaggtg gcccgtctcg gcgatggtca gggcggattc gatggtttcg
      121 agatcgcgca tctcgcccac cagcaccacg tcgggatcct ggcggagggc cgagcgcagg
      181 gccttcttga agctgtgggt atccgcgtgg atctcacgct ggttcaccag ggcccgcttg
      241 tgcttgtgga cgtattccac cggatcctcg atggtgagga tgtggacggg ttcctcggtg
      301 ttgatcttgt ccaccatggc ggcgagagtc gtggacttgc cggaacccgt cacccccgtc
      361 accagcacca ggccgcgggg cttgtcgcag agggcctgga tggaaggcgg caggcccagc
      421 tggtcgaagc tgcggatgtt ctcggggatg gtgcggaaca cccccgccgt ggcgccccgc
      481 tggttgaaga cgttggcgcg gaaccgggcc acgccctgca ggccgaagga gaagtccacc
      541 tcgagatcct cctcgagccg gtgcttctgc tgatcggtca tgacgccata gcagagccac
      601 cgggtctggg acgcgtccat gggcggcagc ttgaggggca ccatgcggcc gtcgatgcgg
      661 atctgcgggg cggattccgt ggtgatgtga aggtcggtcc ccccgtactc caccatggtc
      721 ttgagcagct gctgcagcgg agctacgtag ttggcgccga cttcactcat ggggacctcg
      781 gaaagacaaa agctgggaca ggattaacag gatgaaaagc aggattaaca ggattctggc
      841 tggcgtggag tccggaattt cttcttcacc tggaggctgc gggttccgaa gttcagcagc
      901 aatgcctgtt ccaagcctgt tgcggccaga tagttgacga cctgcacttc atgttcggga
      961 aggacggctt gcacggcctt cagttcaagg atcagcaccc cgttcaccag aaggtctgcc
     1021 cggtactgcc ccaccagttc cccgcggtag cgcacctcga gtttcacctc gcgctcgaac
     1081 gggatgccgt ccaaagccat ttcaagggcc agcgcattct ggtacacgga ttcggtgaat
     1141 cccggcccca ggacagaatg aaccctcatc gccgcgccaa tcacacgacc cgaaagctca
     1201 tccgtggcat gcccctcagg catcacaagc attccccttc ttgaatcctg ttaatcgatc
     1261 tttcaatcct gttaatcctg tcaaagaact tggcatgcgt gggtcggcgc ctacaacacg
     1321 gtttcgcgga tgatctcttc gatggtggtg acgccgtcga gcaccttgcg gcagccggag
     1381 cggcgcaggg tgatcatgcc ctctttctgg gcctgctcgc gcagctcgat ggccgaggcc
     1441 ccggtgagga tcatgtcctt gagcgtttcg gacatctcca gcacttcgta gagccccacc
     1501 cggcccttgt agccccgctt gttgcaggtt tcgcagccca cgggcttgta gaacgtgatg
     1561 cccttcctga tctcctcggg ggtgaacccc accgagacca gggcttcctc aggctggtgg
     1621 tgcgtgtcca ccgccttgca gctggcacag aggcggcgca ccaggcgctg ggcgcagatg
     1681 atgttcacgg aggtggccac caggaagggc tccacgccca tgttcatgag gcggttgatg
     1741 gtgctggggg cgtcgttcgt gtgcagggtc gagagcacca ggtgcccggt cagcgaggcc
     1801 ttgatggcga tctcggcggt ctcgaagtcg cggatctcgc ccaccaggat gatgttggga
     1861 tcctgccgga ggaaggaccg cagcgcggca gcgaagttca ggccgatctg ttccttcatc
     1921 tgcacctggt tgataccggg gaagttgaac tccaccggat cctcggcggt gatgatgttg
     1981 gtatccaccg tgttgagctt ggcgatggat gagtacaggg tgttggtctt gccggatccc
     2041 gtggggccgg tgacgagcac catgccgtag ggcttggaga tctggcggtc ccagcggtcg
     2101 aggctctcct gctcaaagcc cagcttggtg agatcgagca tgagcttgtc gctgtccagc
     2161 agccgcagca cgatcttttc gccgaagagc gtgggcagga tgctcacgcg gtagtcgatg
     2221 accttctgcc ggccgcccat gttcacgcgc agcttgatgc ggccgtcctg gggcaggcgc
     2281 ttctcggcga tgttgagctt cgccaggatc ttcacgcggg aggtcagcgg atccttcagc
     2341 ttgaggttcg gccgcatgac ctccatgagg atgccgtcga tgcggaaccg gatgcggtag
     2401 ttcttctcat agggctcgat gtggatgtcg gaggcgccgc gcttgatggc gtcgatgagc
     2461 accatgttca cgagcttcac cacgggggcg tcttcgctgc cccgcttcag ggcgccgacg
     2521 ttgatgctct cctcgtcgtc atccgtggtg tcgaactccg cgtcggcatc cagctcctgt
     2581 tccagctccg acaggtcgaa ctgctcgtcc tgctcgttga agggctgggc gatccccgtg
     2641 gtggaggtgg ggcccgcggc ggccgcgccg ctgcccgcgt tcccgccgga cgtggtccgg
     2701 gagcccatgc catccgccag gcgcacggcg ctggcgccgc cgtagtactt ctcgacggcc
     2761 cgcaccaggc ccatctcgct ggaaaccacg ggatccacgt tgtagcccgt gtggaaccgc
     2821 acatcgtcca tggcgaagat atccgtggga tcggacatgg ccagggtcag cacattgccc
     2881 gtgcgctgga ggggcaggac cttgtggcgc tgggccagat ccttcggaat cagggcgatg
     2941 acgcccgcgt caatgggagg ccactgctcc agatccgcgg cgggcacgcc gtactgcatg
     3001 cccaggaagc tcacgatgtc ctgatccgaa cagaagcctt ggcgcacgac gatacttccg
     3061 agcttgccgc cttcgcgccg ctggattttc acaacttctt ccagctgggc atccgtgatg
     3121 agctgcgcct tgacgagcat ttccccgagc ttgctgacca ctggctgcct ccggatgggg
     3181 tgtggcgatg gtatcacctc cctggcccgt cgcgaggcct aacccattgt atgcttttgc
     3241 catgcccctc tcaggaaccc cgccccagcg cctgatggcg gcccggcagc tgatccggga
     3301 gaaggggctt tccaggacgg atctgaccct gctggaggac atcctcaagg agggtgccgg
     3361 ggacctggac ccactgctgg aagccccacc tcgcgagccc ccctccggcg gggaatcccc
     3421 ggcccaggcg gatttgaggc gcagcctcgg ccttttcctg gccttcctgc accagttctc
     3481 gccccgccgc ctgggcgaag cccgggcctc catgggacag gtcatgcagc acagcctggc
     3541 ccgcctggga cacctggccg aggccgccca ccgggagatg atggtggagc aggcccagcc
     3601 cgcctgggtg gtgctcgtgc tggacctgct ggcgtcgctg cgggtgatgg ccccgcccct
     3661 gggcgaagag gatggaacgc tccgcgccct ctgggccgcc ttcctggagg accaccgcga
     3721 atccttccgc cagatcctgg cggccctcca gcagcgcgac accggcccgg agaccgtggc
     3781 ccgcctgaat gcgcagatga aggtggtgaa ccgggccatc cagggcaagg ggcggctgga
     3841 ggaatccctg gcgcggctgg cggaacagct ggagggctgc atccccccgg acatccatgc
     3901 ccgggtggaa cccctgatcc tgctccagca cgtcatctcc aacctgcgcc tgagcctgat
     3961 gcgccccctg gaccgcggca tccattggcc tgcggtggaa caggtgcggg gcagcctgcg
     4021 ctggctctgg gaccacctgg gctgggtcct gccccgcatg gatgccgggc tgttccagga
     4081 acgcatgccc gccgagctgc gccggctgct ccagaatctc cggcgcgaga atccggcggc
     4141 cttttccgtg gtggcccggg ctctcgccag ccacatctcc ctgctgggat tgctggaatc
     4201 cctggaaccc gctttgggcg ccgacacccg ggagcgctat gcggcggtgc ccaccttcct
     4261 cgtggtcgaa tccgagctgg gccgcatgtc cgaccgcacc tacgaccccg ggcgggcccc
     4321 cctgctggat cccgagcacc cggaagtgcc gcggctccgg gcctacctcc gccaggccgt
     4381 gctgagcctc cgccaggacc aggggactct gcg
//
LOCUS       DASUDT010000084         5460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1506603, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000084 DASUDT010000000
VERSION     DASUDT010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1506603"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..623
                     /locus_tag="VFV26_01760"
     CDS             <1..623
                     /locus_tag="VFV26_01760"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX4844912.1"
                     /translation="EAGQIKHVAISCVVPPLHPVLMSLSKLYFGVDAFYIEPGVKTGV
                     KVLIDNPAELGADRLVNAVAGIEKYGAPLIVVDFGTATTFDVINAKKEYLGGLICPGL
                     KISADALFQRASRLPRVEIAEPERLVGRNTVQAMQSGIFYGYVGMVDGILDRLLAECP
                     EAKVAATGGLGQVIAPHTKHIRQIAPDLTLDGLRILWFRNQGSGRK"
     gene            627..1298
                     /locus_tag="VFV26_01765"
     CDS             627..1298
                     /locus_tag="VFV26_01765"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844913.1"
                     /translation="MDLPLIRLAEVDSTQAFLRRNAHLGFCAVVADLQVDGRGRQGNR
                     WESAAGTGLWLSAALPSPSGVAPGLVLQRAMAAAARVLDPEGATLGLKWPNDLVAWKG
                     GRLVKLGGILGEQVGGRLILGLGVNLTSAPVIPERAIPPACLAELGLPVPATADLAIR
                     IISSWTDLREDLQPPFRWPEAGAALQWEDGQGTCLGWEPDGRLKVATAQGIRRLSAGD
                     VVGLG"
     gene            complement(1299..2501)
                     /locus_tag="VFV26_01770"
     CDS             complement(1299..2501)
                     /locus_tag="VFV26_01770"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LeuA family protein"
                     /protein_id="HEX4844914.1"
                     /translation="MTLDELINDWNGPLPRGARIPQLNDETLRDGLQSPSVRDPDIAA
                     KRDLVHRMARLGVDAMDLGMPGAGPKALAAVRALMVEIRDHRLPLSPNVAVRTLESDL
                     AQVAEIQQRAGFRLEAGAFIGSSPVRMDVEGWDLAFLVDTARKAVAFCRRQEVPVMMV
                     TEDSTRAQPEVLKAIYTAALDEGAQSICLSDTCGHATPDGARRLVRFIKDEVVKDRSV
                     RIDWHGHNDRGLGVANAIAAFEAGADRLHGSILGIGERCGNVALDQLMINLHLMGFPK
                     GDLSDLPALAERVAELCDVEIPANYPVLGRDAFRTGTGVHAAAIVKALHRGDVELADA
                     VYSGVPAALVGRRQEIEIGPMAGHSNVVYWLEMNGYDPTPDRVDRILQSAKNSPRILN
                     ETEIRAVL"
     gene            complement(2509..4005)
                     /locus_tag="VFV26_01775"
     CDS             complement(2509..4005)
                     /locus_tag="VFV26_01775"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX4844915.1"
                     /translation="MRIAAIDVGSNSIHLVVVEADSMGGQQVLAREKAMVRLALGEAR
                     SGEIGPTAYRAGLDALAQMARIIRDFACETIMACGTAALRDAKNAQAFVMEAEALGIP
                     IQVISGEEEARLIHQAVSHAIPFPPEPVTLVDIGGGSTELTWVQAGRVAASISLPWGL
                     QRLADAAQTSDPPSAIDLRRLRKMIRKILKKARKDLPTELPEPTLLLGTSGTLEDLAK
                     GAAEGRAFTAQQLRAYALKLWRADAQQRIDRLGVDPKRAEVLHVGAIWALSLMEWLGT
                     PPLRHLPVGLREGMIWEALKHGGAAIPPLAERRRASVEQLAARLDPDPGHSRHVARLA
                     DQLFVALQPHFELGDTERQWLAYAARLHDIGFSISEKSHHKHGEYLVRNAALPGFWPE
                     EVDLLAQVVRFHRGKAPHHAKHEAFRALAPWHRQVVRKLAALVRGADALDRRRRQAVR
                     SLSVDMDDQTLWVRLEAAGEVEAEMEAFLEKSALLGTLLDRRIEVTVI"
     gene            4107..4493
                     /locus_tag="VFV26_01780"
     CDS             4107..4493
                     /locus_tag="VFV26_01780"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX4844916.1"
                     /translation="MSAAPIRPSDGELAILRILWSRGPSTVRDVHTELSKDRDMGYTT
                     VLKLMQIMVEKGLVARDERARSHTYRPLQGEAETQRCLLKELLQKAFAGSRRELVLQA
                     LEAEPASAEELEDIRKLLNEVKGRAR"
     gene            4490..>5460
                     /locus_tag="VFV26_01785"
     CDS             4490..>5460
                     /locus_tag="VFV26_01785"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX4844917.1"
                     /translation="MNDLASIPLLQAIGWALLHSLWQGALLALLAAMALWLARRRSAE
                     FRYTIASTTLGLLVLAFAGTLAWISTGGDPLSTTNDVLITPMVEGGGLGSWMFQLHAV
                     LGPWIPWLFLAWVLGFSFRLVLVGHAMAWLYGPCLGSLQPPPAEWLTRFEALRVRARV
                     RIPVRLGLSTRVDSLVVLGWLKPVVLVPAAAFLALSPEALEALLAHELAHVRRGDFLA
                     NLVQTFAEALLFYHPAVWWLSRRIRQEREHCCDDAAVQACGDPILYASALVGLEELRS
                     QSILIPDLAPAASGGHLMSRIQRLLRPHPSHVAAAPLAIFIPVLLLVA"
BASE COUNT          771 a         1871 c         1895 g          923 t
ORIGIN      
        1 tcgaggccgg ccagatcaag catgtggcca tctcctgcgt ggtgccgccc ctccatcccg
       61 tgctcatgag cctgtcgaag ctctacttcg gggtggatgc cttctacatc gagcccggcg
      121 tgaagaccgg cgtgaaggtc ctcatcgaca atcccgccga gctgggcgcc gaccggctgg
      181 tgaacgccgt ggcgggcatc gagaagtacg gcgcgccgct catcgtggtg gatttcggca
      241 ccgccaccac cttcgatgtc atcaacgcga agaaggaata cctgggcggc ctcatctgcc
      301 cgggcctgaa gatcagcgcc gatgccctgt tccagcgggc cagccgcctg ccccgcgtgg
      361 agatcgccga gcccgagcgc ctggtgggcc gcaacaccgt gcaggccatg cagtccggca
      421 tcttctacgg ctacgtgggc atggtggacg gcatcctgga ccgcctgctg gcggaatgcc
      481 cggaggccaa ggtcgccgcc accggcgggc tgggccaggt gatcgcgccc catacgaagc
      541 acatccgcca gatcgcgccg gacctcaccc tggatggcct gcgcatcctc tggttccgca
      601 accagggttc gggacgcaag taatccatgg atctgccgct gatccgcctg gccgaggtgg
      661 attccaccca ggctttcctc cggcggaacg cccacctggg cttctgcgcc gtggtggcgg
      721 accttcaggt ggatggccgg ggccgccagg gcaaccgctg ggagagcgcc gccgggaccg
      781 ggctctggct gtccgctgcg ctgccgtccc cctccggcgt ggcccctggc ctggtgctcc
      841 agcgggccat ggccgccgcc gcccgggtgc tggatccgga aggggccacg ctcggcctca
      901 agtggcccaa cgacctggtg gcctggaagg gaggccgcct ggtgaagctg gggggcatcc
      961 tcggcgagca ggtgggcggc cgcctcatcc tgggcctggg cgtgaacctg acctcggccc
     1021 cggtcattcc ggagcgggcc attcccccgg cctgcctggc cgagttggga ttgccggttc
     1081 cggccacggc cgatctggcg attcgcatca tcagctcatg gacagatttg agagaagatc
     1141 ttcaaccgcc cttcaggtgg cccgaggctg gggccgccct ccagtgggag gatggccagg
     1201 gcacctgcct gggctgggaa cccgatggcc gcctgaaagt ggcgaccgcc cagggcatcc
     1261 gccgcctcag cgcgggggat gtggtggggc tgggctgatc acagcaccgc ccggatctcc
     1321 gtttcgttga ggatcctcgg gctgttcttg gcggactgga ggatgcggtc cacgcggtcg
     1381 ggggtggggt cgtagccgtt catttcgagc cagtagacga cgttgctgtg gccggccatg
     1441 gggccgatct cgatttcctg gcggcggccc accagggcgg cggggacgcc ggagtagacg
     1501 gcgtccgcca gttccacgtc gccgcggtgc agggccttca cgatggcggc ggcgtggacg
     1561 ccggtgccgg tgcggaaggc atcgcggccg agcacgggat agttggcggg gatctccaca
     1621 tcgcacagct cggccacgcg ctcggccagg gcaggcagat ccgacaggtc gcccttggga
     1681 aagcccatga ggtgcaggtt gatcatgagc tggtccaggg ccacgttgcc gcagcgctcg
     1741 ccgatgccca ggatgctgcc atgcagccgg tcggccccgg cctcgaaggc ggcgatggca
     1801 ttggccacgc ccaggccgcg gtcgttgtgg ccgtgccagt cgatgcgcac ggagcggtcc
     1861 ttcaccacct cgtccttgat gaagcgcacc agccgtcgcg cgccatccgg ggtggcatgg
     1921 ccgcaggtgt cggagaggca gatggactgg gcgccctcgt ccagcgcggc ggtgtagatg
     1981 gccttgagca cctccggctg ggcccgggtg ctgtcctcgg tcaccatcat cacgggcacc
     2041 tcctgacggc ggcagaaggc cacggccttc cgggccgtat ccacgaggaa ggccaggtcc
     2101 cacccttcga catccatgcg cacggggctg gagccgatga aggcgccggc ttcgaggcgg
     2161 aagcccgctc tctgctggat ctcggccacc tgggcgagat ccgactccag ggtgcgcacg
     2221 gccacgttgg ggctgagggg caggcggtgg tcgcggatct ccaccatgag cgcccgcacg
     2281 gccgccaggg ccttggggcc cgcgccgggc atgcccagat ccatggcatc cacgcccagg
     2341 cgggccatgc ggtggaccag gtcgcgcttg gcggcgatat cgggatcgcg cacggagggg
     2401 ctctggaggc cgtcccgcag ggtctcgtcg ttgagctgag gaatgcgcgc gcccctggga
     2461 agggggccgt tccagtcgtt gatgagctcg tccagggtca tggaaggttc agattacggt
     2521 gacttcgatc cggcggtcca gcagcgtgcc cagcagggcg ctcttctcca ggaaggcctc
     2581 catctccgct tccacctctc ccgcggcttc cagccgcacc cacagggtct gatcgtccat
     2641 gtccacggac aggctgcgca cggcctgtcg ccgccttctg tccagggcat cggcgccccg
     2701 caccagggcc gccagcttgc gcaccacctg gcggtgccag ggcgccaggg cgcggaaggc
     2761 ctcgtgcttg gcgtggtggg gcgccttgcc ccggtggaag cgcaccacct gggccagcag
     2821 gtccacctcc tcgggccaga agccgggcag ggcggcattg cgcaccaggt actcgccgtg
     2881 cttgtggtgg ctcttctcgg agatggaaaa gccgatgtcg tgcaggcggg ccgcataggc
     2941 cagccactga cgttcggtat cgcccagctc gaagtggggc tggagggcaa cgaagagttg
     3001 gtccgccagc cgtgccacgt ggcggctgtg gccgggatcg ggatccaggc gggcggccag
     3061 ctgttcgacg gaggcccggc gccgctccgc caggggcggg atggccgcgc cgccatgctt
     3121 cagcgcctcc cagatcatgc cttcgcgcag gcccacgggc aggtggcgca ggggcggggt
     3181 gcccagccat tccatgagcg acagggccca gatggcgccc acgtgcagca cctcggcgcg
     3241 cttgggatcc acgcccaggc ggtcgatccg ctgctgggca tccgcccgcc acagtttcag
     3301 cgcataggcc cgaagctgct gcgccgtgaa ggcgcggccc tcggcggcgc ccttggccag
     3361 atcctccagg gtgcccgagg tgccgaggag cagcgtgggc tccggcagct cggtggggag
     3421 gtccttgcgg gccttcttga ggatcttccg gatcatcttg cggaggcgcc ggagatcgat
     3481 ggcgctggga ggatccgatg tctgggccgc gtccgccagg cgttgcagtc cccagggcag
     3541 ggagatgctg gcggccacgc ggcccgcctg cacccaggtg agctccgtgc tgcccccgcc
     3601 gatatccacc agggtcacgg gttcgggggg gaaggggatg gcgtgggaca cggcctggtg
     3661 gatgagccgg gcctcctcct cgcccgagat cacctggatg gggatgccca gggcctcggc
     3721 ctccatgacg aaggcctgcg cgttcttcgc gtcccgcagg gccgccgtgc cgcaggccat
     3781 gatggtctcg catgcgaagt cccggatgat ccgcgccatc tgagccaggg catccaggcc
     3841 cgcccggtaa gccgtggggc cgatctcgcc agatctcgcc tcgcccaggg ccaggcgcac
     3901 catggccttc tcccgggcca gcacctgttg gccgcccatg gaatcggcct ccaccaccac
     3961 caggtggatg gagttcgagc cgacatcgat ggctgcgatc cgcatgggac gattgtggcc
     4021 gcggggcggc cccaaaaagt acgaatcgat tcgttgacaa cctacgaatc gattcgtatg
     4081 ttgtctccat accccctgga ggccccatgt ccgccgcgcc catccgtccg tccgatggtg
     4141 agctcgccat cctgcggatc ctgtggtcgc ggggcccttc cacggttcgg gacgtgcata
     4201 ccgaactgtc gaaggaccgg gacatgggct acaccaccgt gctgaagctc atgcagatca
     4261 tggtggagaa gggcctggtg gcgcgggacg aacgcgcgcg ctcccacacc taccggcccc
     4321 tccaggggga ggccgaaacc cagcgctgcc tgctgaagga acttctgcag aaggcctttg
     4381 cgggcagccg ccgggaactc gtcctccagg ctctcgaagc cgaaccggcc tcggcggagg
     4441 aactggagga catccgcaag ctgctgaatg aagtcaaagg gagagcccga tgaacgatct
     4501 ggcgtccatc cccttgttgc aggccatcgg ctgggccctg ctccacagcc tttggcaggg
     4561 cgcgctgctg gccctgctgg cagcgatggc cctctggctc gcccggcgcc gctccgcgga
     4621 attccgctac accatcgcgt cgacgaccct cggcctgctg gtccttgctt tcgcgggaac
     4681 cctggcttgg atctcgaccg gcggcgatcc actttccacg accaatgacg ttttgatcac
     4741 ccccatggtt gagggaggcg gtttggggag ctggatgttc cagctgcacg ccgtgctcgg
     4801 cccctggatt ccctggttgt tcctggcctg ggttctgggg ttcagcttcc gccttgtcct
     4861 ggtggggcat gccatggcct ggctctacgg gccttgcctc ggcagcctcc agcctccgcc
     4921 cgccgaatgg ctgacgcggt tcgaggcttt gagggtccgt gcccgcgtgc ggattcccgt
     4981 ccgcctgggg ctttcaaccc gggtggattc cctcgtggtg ctgggctggc tgaaacccgt
     5041 ggtgctggtt ccggccgcgg ctttcctggc cctgtccccc gaggctctgg aggcccttct
     5101 ggcccatgaa ctggcccatg tccgccgggg ggatttcctc gcgaaccttg tccagacctt
     5161 tgcggaagcc ctgttgttct accaccccgc cgtctggtgg ctctcccggc gcatccgcca
     5221 ggagcgcgag cactgctgcg atgacgcggc cgtgcaggcc tgcggtgatc cgatcctcta
     5281 cgcctccgcc ctcgtcgggc tggaggaact ccgctcccaa tcgatcctga ttcccgatct
     5341 ggcccccgcg gccagtggag gccacctcat gtcccgcatt caacgactgc tgcgcccaca
     5401 tccaagccat gtcgccgccg cgcccttggc catcttcatt ccggtcctcc tgctagtggc
//
LOCUS       DASUDT010000085         3469 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1418114, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000085 DASUDT010000000
VERSION     DASUDT010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418114"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VFV26_01790"
     CDS             complement(<1..847)
                     /locus_tag="VFV26_01790"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF005394.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HEX4844918.1"
                     /translation="MNPGYLAHLNREIEQLKEAGLYKTERVITSPQQPQMKANGRDVV
                     CLCANNYLGLANNPEVIQAAKAVMDGHGFGMASVRFICGTQDIHRELELKLADFLGFE
                     DTQLYSSCFDANGAIFEGLLGEEDAVISDALNHASIIDGIRLCKAKRFRYANSDMADL
                     EAQLKAADAAGARFKLVVTDGVFSMDGYIAKLGEICDLAERYNAMVMVDDSHAVGFMG
                     VNGRGTHEHCGVMGRVDFMTGTFGKALGGASGGYIAGKREAIDWLRQKARPYLFSNSV
                     APAIVA"
     gene            958..1503
                     /locus_tag="VFV26_01795"
     CDS             958..1503
                     /locus_tag="VFV26_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844919.1"
                     /translation="MRPLLLLPALLLTLACSSKLERGKAEDLIRKDYPVVVPVTVPER
                     ASADKGSPEHLRLVALKENLDRSGWFDSAVQTEGARETFTFRLKADAPKTIKAAPKGF
                     SMPAAEAVFVRALRMEPTREGARVTYEIRLEKPTAQFPIFQALHPDAKVGQVKQRHAT
                     FERRRGSWERTGTDEAFRKSE"
     gene            1571..2914
                     /locus_tag="VFV26_01800"
     CDS             1571..2914
                     /locus_tag="VFV26_01800"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4844920.1"
                     /translation="MDHSPAFRLRRFLNWFPLGLTYAAMYMGRYNFNIVKNDIGAWYH
                     LDKAQMGFIASAGFWTYGLSVALNGPLADRIGGRKAILVGAIGAALVNLAIGFMFLNG
                     DASQVLVSMSLLWSLNMYFQSFGALSVVKVNSTWFHVKERGVFGGIFGIMISSGYFLA
                     TTIGAWLLASSQSWTVIWFVPAAVMAFMFGVDWFLVRNRPSHAGHADFDTGDGSNAHH
                     AEDAPLPLGDLMRKVFHNPVIVALIFAEFCTGFVRQGVMLYFTEYLQEVYHLSKKEHL
                     FWWTGIAFMGGGILGGLLCGWMSDKLFQSRRPPVAFVFYLVQVVMLGLLGMTLGQGST
                     GGQIWAVLLLGLTAMFIFGVHGMLSGTASMDFGGRKAAATVTGALDGIQYIGSGLTGF
                     GLGWILKTYGWDGVAAHGHQPAHAWVWVGSIIPFSLMGAYIMTRIWNAKAGASAH"
     gene            complement(2996..>3469)
                     /locus_tag="VFV26_01805"
     CDS             complement(2996..>3469)
                     /locus_tag="VFV26_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844921.1"
                     /translation="EAARGGAHGSAFPLCPPHGYDTAFQTLSPAILEKAAVLYVWVDP
                     AESRRKNIERGRPDGQGSILHHSVPMEVMLGQYGTDDMAWLMEQSDRPGAIRVERLIQ
                     AGDRYETKVYHLPVARFDNRNDLTTFVREDQKLWKPADVQAIHGGLKAAFDQLAK"
BASE COUNT          535 a         1164 c         1140 g          630 t
ORIGIN      
        1 cggccacgat ggcgggcgcc acagagttgg agaacaggta ggggcgggcc ttctggcgca
       61 gccagtcgat ggcttcgcgc tttcccgcga tgtagccgcc cgaggcccca cccagggcct
      121 tgccaaaggt gccggtcatg aagtccacac ggcccatgac gccacagtgc tcgtgcgtgc
      181 cacggccatt cacgcccatg aagcccacgg cgtggctgtc atccaccatc accatggcgt
      241 tgtatctctc ggcgagatcg cagatctcgc cgagcttggc gatgtagccg tccatgctga
      301 acacgccgtc cgtcaccacc agcttgaagc gggcgcccgc ggcgtcggcg gccttcagct
      361 gggcttccag atcggccatg tccgagttgg catagcggaa gcgcttggcc ttgcagaggc
      421 ggatgccgtc gatgatggag gcgtggttca gggcgtcgct gatgacggcg tcctcctcgc
      481 ccagcaggcc ctcgaagatg gcgccgttgg cgtcgaagca gctggaatac agctgggtgt
      541 cctcgaagcc caggaagtcc gccagcttga gctccagctc ccggtggatg tcctgggtgc
      601 cgcagatgaa gcgcaccgag gccatgccga agccgtggcc gtccatcacc gccttggcgg
      661 cctggatgac ctccgggttg ttggccagac ccaggtagtt gttggcgcag aggcacacca
      721 cgtccctgcc gttggccttc atctgcggct gctggggcga ggtgatgacg cgctcggtct
      781 tgtagagccc ggcctccttc agctgctcga tctcgcggtt gaggtgggcc aggtagccag
      841 gattcacggc gggtctccta ttcatcggag cccacaggat actccggggc gccgttgatg
      901 cccgtcatgt cgccccggat gtgtcaccat ccttgcgaac tggaaaggat tccgatcatg
      961 cgccccctcc tgctcctgcc cgccctgctc ctcaccctgg cctgcagctc caagctggag
     1021 cgcggcaagg ccgaggatct gatccgcaag gactaccccg tggtggtgcc ggtcacggtg
     1081 cccgaacggg cctcggcgga caagggcagc cctgagcacc tgcgcctggt ggcgctcaag
     1141 gagaacctgg accgcagcgg ctggttcgac agcgcggtcc agaccgaggg tgcccgggag
     1201 accttcacct tccgcctgaa agccgatgcc cccaagacca tcaaggccgc gccgaagggg
     1261 ttctccatgc ccgcggcaga ggccgtcttc gtccgggccc tgcggatgga gcccacccgc
     1321 gagggggccc gtgtcaccta cgagatccgc ctggagaagc ccacggccca gttccccatc
     1381 ttccaggccc tgcatccgga cgccaaggtg gggcaggtca agcagcgcca cgccaccttc
     1441 gagcggcggc ggggatcctg ggagcggacc ggcactgacg aggccttccg caaatccgag
     1501 tgaccgaggt tacaacctga ccgcttgggc gtcggccgtg gctccattac cctgaggcat
     1561 cgaggttccc ttggatcaca gccccgcctt ccgcctccgc cgattcctga actggttccc
     1621 cctggggctg acctacgcgg ccatgtacat gggccgctac aacttcaaca tcgtgaagaa
     1681 cgacatcggc gcctggtacc acctggacaa ggcgcagatg ggcttcatcg cctccgcggg
     1741 cttctggacc tacggcctgt ccgtggccct caacgggccc ctggcggacc gcatcggggg
     1801 ccgcaaggcc atcctcgtgg gcgccatcgg cgcggccctg gtgaacctgg ccatcggatt
     1861 catgttcctg aacggtgacg cctcccaggt gctggtgagc atgagcctcc tctggagcct
     1921 gaacatgtac ttccagagct tcggggccct ctccgtggtg aaggtgaaca gcacctggtt
     1981 ccacgtgaag gagcggggcg tcttcggggg catcttcggc atcatgatca gctcgggcta
     2041 cttcctggcc accaccatcg gcgcctggct gctggccagc tcccagagct ggaccgtcat
     2101 ctggttcgtg ccggccgcgg tcatggcctt catgttcggc gtggactggt tcctggtgcg
     2161 caaccggccc agccacgcgg gtcacgcgga cttcgatacg ggggacggat ccaacgccca
     2221 ccacgccgag gacgcccccc tgcccctggg cgacctcatg cgcaaggtct tccacaatcc
     2281 cgtgatcgtc gccctgatct tcgcggagtt ctgcacgggc ttcgtccgcc agggcgtgat
     2341 gctctacttc accgagtatc tgcaggaggt ctaccacctc agcaagaagg agcacctgtt
     2401 ctggtggacc ggcatcgcct tcatgggcgg cggcatcctg ggcggcctgc tctgcggctg
     2461 gatgagcgac aagctgttcc agtcccgccg cccccccgtg gccttcgtgt tctacctcgt
     2521 ccaggtggtg atgctgggcc tgctgggcat gaccctgggc cagggcagca ccggcggcca
     2581 gatctgggcc gttctcctgc tgggcctgac ggccatgttc atcttcggcg tccacggcat
     2641 gctcagcggc accgccagca tggacttcgg cgggcgcaag gccgccgcca ccgtcacggg
     2701 cgcgctggac ggcatccagt acatcggctc gggcctcacg ggcttcggcc tgggctggat
     2761 cctcaagacc tacggctggg acggcgtggc cgcccatgga caccagccgg cccatgcctg
     2821 ggtgtgggtc ggatccatca tccccttcag cctcatgggc gcctacatca tgacccgcat
     2881 ctggaacgcc aaggcggggg cttcggcgca ctgaacaaga agttggtcca cagattccac
     2941 agattcacac agatttccgt tcgagcttga atctgtgaaa tctgtggact tttttttact
     3001 tcgccagctg gtcgaaggcc gccttcaggc cgccatggat ggcctggaca tcggcgggtt
     3061 tccacagctt ctggtcttcg cgcacgaagg tggtgaggtc gttccggttg tcgaaacggg
     3121 ccacgggcag gtggtagacc ttggtttcgt agcggtcgcc agcctggatg aggcgctcca
     3181 cgcggatggc gccggggcgg tcgctctgct ccatgagcca ggccatgtcg tccgtgccgt
     3241 actggcccag catcacctcc atggggacgc tgtggtggag gatgctgccc tggccgtccg
     3301 ggcgaccgcg ctcgatgttc ttgcggcggc tttcggcggg atccacccag acgtagagga
     3361 cggcggcctt ctccaggatg gcgggcgaca gggtctggaa ggccgtgtcg tagccgtggg
     3421 gcgggcacag ggggaaggcc gagccgtggg cgccgccgcg ggcggcctc
//
LOCUS       DASUDT010000086         9649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_92608, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000086 DASUDT010000000
VERSION     DASUDT010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9649
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92608"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VFV26_01810"
     CDS             complement(<1..396)
                     /locus_tag="VFV26_01810"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HEX4844922.1"
                     /translation="MRDSLRTRLFRWAFNLWPCFRGTGARVVFIASDWSEVRVRLPLS
                     WRTRNYVGTIFGGSLYAGVDPFYMLMLMHRLGPHYVVWDKAASIRFRKPGRSTLNAAF
                     RVEEAEVEEIRRLLQDQPKVDRTYVVELVD"
     gene            complement(404..1384)
                     /gene="glpX"
                     /locus_tag="VFV26_01815"
     CDS             complement(404..1384)
                     /gene="glpX"
                     /locus_tag="VFV26_01815"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEX4844923.1"
                     /translation="MEQTLSLEFLRVVEQAAIACATSIGHGRRKHSDRLAVEAMRKTM
                     ENVRMDGTIVIGEGERDEAPMLYIGEKVGMGADMDGDHPAVDIAVDPLEGTNLCATGA
                     PNAIAVLAATEKGGLLHAPDLYMEKLVVGPAAKGKVSLDAPVQENLEIIARSLDRKVE
                     EITVSVLDRERHAQLIDDIRKAGARIQLIGDGDLSAAISAAVSGTGIHAVMGTGGAPE
                     GVLSAAALKCLNGEIQGRLKVDTNTASREKAEAMGVDFNRIYFTDDLCPGQQIVFAAC
                     GVTHGNLLKGVLHFGHGVRTSSLILTYGARQVRFIDTVHMKEGEQVTVRF"
     gene            complement(1419..1745)
                     /gene="cutA"
                     /locus_tag="VFV26_01820"
     CDS             complement(1419..1745)
                     /gene="cutA"
                     /locus_tag="VFV26_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEX4844924.1"
                     /translation="MSDACTILTTCGSEETALTIAAALVDQAYAACVNIVPSIKSYYY
                     FKGETHLDEEVLLIIKTTRELFPRVSEVITDLHTYEVPEILMFPVEAGSEPFLDWIRQ
                     SVNRLA"
     gene            complement(2073..2149)
                     /locus_tag="VFV26_01825"
     tRNA            complement(2073..2149)
                     /locus_tag="VFV26_01825"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2113..2115),aa:Pro,seq:cgg)
     gene            complement(2198..2602)
                     /locus_tag="VFV26_01830"
     CDS             complement(2198..2602)
                     /locus_tag="VFV26_01830"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX4844925.1"
                     /translation="MAAPRRPPRLVPLGARLPDQKALARLSRAWAFVVGPALADRTRP
                     LRVERDVLVMGCWELARIATLREAAAAVWPQIRDRIHRALGLRLSGLQIAPCDPPAET
                     DAPPQDPDPLRRALHLLEARRKERIRLGLEKE"
     gene            complement(2602..3720)
                     /locus_tag="VFV26_01835"
     CDS             complement(2602..3720)
                     /locus_tag="VFV26_01835"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX4844926.1"
                     /translation="MPKPLSHFRIVDLSCVLAGPFATQLLADFGAEVQKLEPPDGDPT
                     RGWGPPFEEGEAGESAYFRCANRGKRSRPIDLHTEDGRADLFDLLKDADVLVENFRAD
                     SADRLGLGWKRLHAKFPKLILASVRGFASDVTASRRAGYDFIIQAESGWMAVTGEPEG
                     RPMKVGVALVDVLAGLYCANGIQAALLHRERTGEALHIEVPLMEAALAGLVNVAAGSL
                     MTGKAPQRWGNAHPQIVPYQSFRCSDGDVAIGVGSDRQFEVLAMWLGLDLDARPEWRK
                     NRGRVKDREELVARIEARTLASTVAEVLAFCESNAIPASPVRSVDDVLFRHGGGLHNL
                     LQPLFDTETNTMVPTLASPVLLNGERACAPLPPPRWRP"
     gene            complement(3754..4182)
                     /locus_tag="VFV26_01840"
     CDS             complement(3754..4182)
                     /locus_tag="VFV26_01840"
                     /inference="COORDINATES: protein motif:HMM:TIGR04191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HEX4844927.1"
                     /translation="MSNYPEPMVAPMREELTQAGFQQLLTPAQVDAALQRPGTTLLVV
                     NSVCGCAAAGARPGVAEALRSQGLRFDHLVTVFAGMEKEATAQAREYFEGAMPTSPQA
                     AILKDGQLVHLMQRQDFLGHSPEEIAATLSAAYRRTIAAS"
     gene            4266..4808
                     /locus_tag="VFV26_01845"
     CDS             4266..4808
                     /locus_tag="VFV26_01845"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEX4844928.1"
                     /translation="MRVALMGGSLRPGSLNTRLLGHLAGQLEARGHEVSRFAGEALRL
                     PLYEDSLAASAEILTLHGALLGAQGLVIVSPEYNAGIPGHLKNAVDWLSTLKPSPWPG
                     LPVLLCAASPGAFGGARGLMAWRATLANMGALALPEALTVPHADQQLDAQGAPTDART
                     AAAVPKVLDGLLSLAARLRS"
     gene            4851..6623
                     /gene="sppA"
                     /locus_tag="VFV26_01850"
     CDS             4851..6623
                     /gene="sppA"
                     /locus_tag="VFV26_01850"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEX4844929.1"
                     /translation="MKSFFKSFFATLLALMVAGGLAFVLFFGMLAAIGSSGKPTVPGK
                     AVLVFDLDTSLSDGERDPEPSEALSDALAGGAARSQSLPVAIEALDRAAADSRITALF
                     LTGSLQNAGPAQLRELREAIQRFKAKKPVLAYNLGWTKRDYYLAAGATTVFINPFGEM
                     EVNGLASEPMFFGEAFKKYGVEVQVTRVGKYKSAVEPFITDRMSEPNREQIQKLLNDI
                     WSEWKDTVAKDRKKTPADLQVIADEKGLVEAEDARKLGLVDRIAPYDEVLDELKKLAG
                     KQAKDKDFPQITLATYAGIPGDAKSGKARIAVVVAEGEIVDGEGKSSQVGGERLSREL
                     RRLRLDDRIKAVVLRVNSPGGSASASELIQREVILTKKVKPVVVSMGHLAASGGYWIS
                     TYGDRIFAEPSTITGSIGVFGLLPNVKKLANGHGITWDSVQTARLANPMTLTRPKNEL
                     ELARIQGLVDRIYEQFVAKVADSRKMKPEAVKEIAQGRVWSGQEAVKLGLVDELGGLG
                     AAVKHAAERIKAGDDYQVVGPEHEPDALKEILKNLGGKSRKLAKPGPVDTLAGGLLRQ
                     LDVLTSLNDPRGVYARLPFEIELK"
     gene            6630..7238
                     /locus_tag="VFV26_01855"
     CDS             6630..7238
                     /locus_tag="VFV26_01855"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX4844930.1"
                     /translation="MDSSSFVSAIVLLVLVTDPLGNIPLFVGLLRQVDPARRQRIIIR
                     EVLFAFVILLFFAFFGQRVLRLMHLTDTSLGIAGGVILFLIALKMVFPHAEGRVGHPI
                     HGEPFLVPLAIPFIAGPSAIATVLLLVSREPHRLWEWLGALSVAMLISAVVLGFAERI
                     ADFLGEQVTMAFERLMGLVLTAIAIEMLLAGIEKFVLQLRAV"
     gene            complement(7235..7720)
                     /locus_tag="VFV26_01860"
     CDS             complement(7235..7720)
                     /locus_tag="VFV26_01860"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HEX4844931.1"
                     /translation="MSSPFERLKQTFGMRLFGWLKIPLLASVRPSVVELTDTRCVVRI
                     PLRRWTRNHLGSMYFGALAIGADCAGGLLAMDQIRRSGKPVSLVFKAFQASFLKRPES
                     DVYFICEEGGAIRDQVRRALDSEERITEPMRIQAAVKLPDGTFEPVAEFTLELSLKRK
                     A"
     gene            complement(7732..8283)
                     /locus_tag="VFV26_01865"
     CDS             complement(7732..8283)
                     /locus_tag="VFV26_01865"
                     /inference="COORDINATES: protein motif:HMM:NF013907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844932.1"
                     /translation="MLLAGHLAKVQGLKGEFLFHAVMDEPEKLDGMQGLVLAPPQQDL
                     EHGEAAPPARSVALRLFRWHQDRPCLAFTDVPDRTAAEPLKGWALWMPEAAADLPEGE
                     SFRHQWIGCEVFIGGRKVGEVLRLDPGPAGYDMVVMRDLRPGRTGQRDIPYIKAWWTL
                     DLPNRRLDLDPPEGLLDVNLPGD"
     gene            complement(8288..8536)
                     /locus_tag="VFV26_01870"
     CDS             complement(8288..8536)
                     /locus_tag="VFV26_01870"
                     /inference="COORDINATES: protein motif:HMM:NF024483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEX4844933.1"
                     /translation="MNFEAFLRDVLTPLLDHPEALRVEVAGEGRKRDVLVFADPMDRG
                     RIIGKHGRMISALRTLCKTAGEKAGLVVNLELDDQDEA"
     gene            complement(8600..8842)
                     /gene="rpsP"
                     /locus_tag="VFV26_01875"
     CDS             complement(8600..8842)
                     /gene="rpsP"
                     /locus_tag="VFV26_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX4844934.1"
                     /translation="MLSIRLARNGAKKRPFYHIVVSENDRIPTGRAVEVLGFVNPIAG
                     SGEEVRIDAEKAKSWLQKGAQPSKTVLDLFKKNQIL"
     gene            complement(8900..>9649)
                     /locus_tag="VFV26_01880"
     CDS             complement(8900..>9649)
                     /locus_tag="VFV26_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844935.1"
                     /translation="FLWSLMLTDTGNQDRALRVLEQATHLRPGIPDLYHGFAYAGRTA
                     GLLEGAKGALARQQALLGAMAQPSSWFAETTYLYLGDWDTFGQELLRARAVRLDANVV
                     FYQGYYALLQGDRQAALAHMKAGVAMAGGPAPFQDLCRVYLAYLEGRREDGLAELRRI
                     DDIRGKLRIPDGEWTFKEAEAYSLLGDADRAVDCATRAFVQGFSCARWYETSPFLDRM
                     RTHPRWPTLRRNIQERQAVLEGSFPPSAFGP"
BASE COUNT         1499 a         3112 c         3482 g         1556 t
ORIGIN      
        1 gtccaccagt tccaccacat aggtgcggtc caccttgggc tggtcctgga ggaggcggcg
       61 gatctcctcc acctcagcct cttccacccg gaaggctgcg ttcagggtgc tgcggccggg
      121 tttgcggaag cggatggagg cggccttgtc ccacacgacg taatgggggc ccagccggtg
      181 catcagcatg agcatgtaga agggatcgac ccccgcgtag aggctgccgc caaagatggt
      241 gcccacgtag ttccgggtcc gccaggagag gggcaggcgc acgcggacct cggaccagtc
      301 cgaggcgatg aataccaccc gggctcccgt gccccggaag cagggccaga ggttgaaagc
      361 ccagcggaag aggcgggtgc ggagggagtc gcgcaaggtg ggcctagaag cggaccgtga
      421 cctgctcgcc ttccttcatg tgcaccgtgt cgatgaagcg cacctggcgg gcgccgtagg
      481 tgaggatgag gctggaggtg cggacgccgt ggccgaagtg cagcacgccc ttgagcaggt
      541 tgccgtgggt gacgccgcag gccgcgaaga cgatctgctg gccggggcag aggtcgtccg
      601 tgaagtagat gcggttgaag tccacgccca tggcctcggc cttctcgcgg ctggcggtgt
      661 tggtgtccac cttgagccgg ccctggattt cgccgttgag gcatttcagg gcggcggcgg
      721 agagcacgcc ctcgggggct ccgcccgtgc ccatgaccgc gtggatgccc gtgccgctca
      781 cggcggcgct gatggcggcg ctgaggtcgc catcgccgat gagctggatg cgggcgccgg
      841 ccttgcggat gtcgtcgatg agctgggcgt ggcgctcgcg gtccagcacg ctgacagtga
      901 tctcctcgac cttgcggtcc agggaccggg cgatgatctc gaggttctcc tgcacaggcg
      961 cgtcaaggct caccttgccc ttggcggcgg ggcccaccac cagcttttcc atgtagaggt
     1021 cgggggcatg cagcaggccg cccttttccg tggccgccag cacggcgatg gcgttggggg
     1081 cgccggtggc gcagaggttg gtcccctcca gggggtccac ggcgatgtcc accgccgggt
     1141 ggtcgccgtc catatcggcg cccatgccca ccttctcacc gatgtagagc atgggggcct
     1201 cgtcgcgctc gccttcgccg atgacgatgg tgccgtccat gcggacgttc tccatggtct
     1261 tccgcatggc ttccaccgcc agcctgtcgc tgtgcttgcg acggccgtgg ccgatggagg
     1321 tggcgcaggc gatggcggcc tgttcgacca cccgcaggaa ttcgagggac agagtctgtt
     1381 ccatggggtg gctcccggga aggctggtcg aggcagggtc aggcgaggcg gttcacgctc
     1441 tggcggatcc agtcgaggaa gggctcggag ccggcctcca cggggaacat caggatctcg
     1501 gggacttcgt aggtgtgcag gtccgtgatg acctcggaca cccggggaaa gagctcccgg
     1561 gtggtcttga tgatgagcag aacctcttca tcgagatggg tttcgccctt gaagtagtag
     1621 tagctcttga tgctggggac gatgttcacg caggcggcgt aggcctgatc caccagggcc
     1681 gccgcgatgg tcagggcggt ttcttcgctg ccacaggtgg tcaggatggt gcaggcgtcg
     1741 ctcatcgggt gggctccccg cccggcgggc ggaaccggtc attgtagctc gggagcggtg
     1801 ctgccgcgga tcacgaaagg cggggcgggg ggtggtgtgg tctgaccgcg gaacgcactc
     1861 cgcgattcca ctcggaggtt ggccgtactc cgtattcggc gccgacccac cagggctgcg
     1921 gattcgaacg cgtctggctg cgccagccgc cggtctcgtt ccggcgcgac atctagtcgc
     1981 gcctccacga tcccactcgg aggttcgaat cttttttcgt ttcatccaga taggcaaagg
     2041 ggggtgcctg cgggcacccc cctttgccta tctggtcggg gcgagaggat tcgaacctcc
     2101 gacctctcgg tcccgaaccg agcgctctac caggctgagc cacgccccga cgaaggtttg
     2161 actctactgg aaacgggcgg aggcgtccag tctggctcta ttccttctcg aggccgaggc
     2221 ggatgcgctc tttgcggcgg gcttccagga ggtgcagggc gcggcgcagg gggtcggggt
     2281 cctggggagg ggcgtcggtc tcggcgggcg gatcgcaggg ggcgatctgg aggcccgaca
     2341 ggcggaggcc cagggcccgg tggatgcggt cccggatctg gggccacacg gcggcggcgg
     2401 cttcgcgcag ggtggcgatg cgggccagct cccagcagcc catgacgagg acatcccgct
     2461 ccacgcgcag ggggcgggtg cggtcggcca gggcggggcc cacgacgaaa gcccaggcgc
     2521 gggaaaggcg ggccagggcc ttctgatccg gcaggcgcgc gcccaggggc acgaggcgcg
     2581 gcgggcggcg gggggcggcc atcagggcct ccagcggggc gggggcaggg gggcgcaggc
     2641 gcgctcgccg ttgagcagca cgggcgaggc gagggtgggg accatggtgt tggtttcggt
     2701 gtcgaagagg ggctggagca ggttgtggag tccgccgccg tggcggaaca gcacgtcgtc
     2761 cacgctgcgc acggggctgg cggggatggc gttggactcg cagaaggcca gcacctcggc
     2821 cacggtgctg gcgagggtgc gggcttcgat gcgggcgacc agttcctccc ggtccttcac
     2881 ccggccgcgg ttcttccgcc attcgggacg ggcatcgaga tccaggccca gccacatggc
     2941 cagcacctcg aactggcggt cgctgcccac gccgatggcc acgtcgccgt cgctgcaccg
     3001 gaaggactgg tagggcacga tctggggatg ggcgttgccc cagcgctggg gggccttccc
     3061 ggtcatgagg gagcccgcag ccacgttcac caggcccgcc agggccgcct ccatgagggg
     3121 cacttcgatg tggagggcct cccccgtgcg ctcccggtgg agcagggccg cctggatgcc
     3181 attggcgcag tagaggcccg ccagcacgtc caccagggcc acgcccacct tcatgggtct
     3241 gccctccggc tcgccggtga cggccatcca gccactctcg gcctggatga tgaagtcgta
     3301 gcccgcccgg cgggaggcgg tgacgtccga ggcgaagccg cggacggagg ccaggatgag
     3361 tttcgggaac ttcgcgtgca accgcttcca gcccaggccc agccggtcgg cggaatcggc
     3421 gcggaagttc tccaccagca catcggcgtc cttcagcagg tcgaagagat ccgcgcggcc
     3481 gtcctctgtg tggaggtcga tgggccggct gcgcttgccc cggttggcgc agcggaagta
     3541 cgcgctttcg ccggcctcgc cctcctcgaa tggggggccc cagccccggg tgggatcgcc
     3601 atcggggggc tcgagcttct gcacctcggc accgaaatcc gccagcagct gggtggcgaa
     3661 agggcccgcc agcacgcagg acagatccac gatcctgaag tgggacaggg gcttgggcat
     3721 cgggttctcc ggtgtccagc ctactggaat ggatcagctg gcggcgatgg tccgtcggta
     3781 ggcggcgctc agggtggcgg cgatctcctc ggggctgtgg cccaggaaat cctggcgctg
     3841 catgaggtgg accagttgcc cgtccttgag gatggcggcc tgggggctgg tgggcatggc
     3901 gccctcgaag tattcccggg cctgggcggt ggcctccttc tccatgccgg cgaagaccgt
     3961 caccaggtgg tcgaagcgca ggccctggga ccgaagggcc tcggcgacgc cggggcgggc
     4021 ccccgccgcg gcacagccac agacgctgtt caccaccaac agggtggtgc cgggccgctg
     4081 gagggccgca tccacctggg ccggcgtgag gagctgctgg aaacccgcct gggtcagttc
     4141 ctcgcgcatc ggtgcaacca tgggctcggg gtagttggac acgggatcct cctcagggaa
     4201 gaaaagttta ccaatcaagt cgagattgat ccaggtcaca ctttccccag tcatgaggag
     4261 gagcgatgcg cgtggccttg atgggcggaa gccttcgtcc cggttccctg aatacccgcc
     4321 tgctgggcca cctcgccggc caactggaag cgcggggtca tgaggtgtcc cgtttcgcgg
     4381 gcgaggccct gcgcctgccg ctctacgaag acagcctggc ggcttcggcg gagatcctga
     4441 ctctccacgg ggccctcctc ggggcccagg gcctggtgat cgtatcgccg gagtacaacg
     4501 cgggcatccc gggccacctg aagaacgcgg tggactggct gagcaccctg aagcccagtc
     4561 cctggcccgg tctgccggtg ctgctgtgcg ccgcgagccc tggtgccttt ggcggtgccc
     4621 gggggctcat ggcctggcgg gccaccctgg cgaacatggg ggccctggcc cttcccgagg
     4681 cgctcacggt gccccacgca gaccagcagc tcgatgccca gggagccccc acggacgccc
     4741 gcaccgccgc ggcggtgccg aaggtcctcg acggcctcct gtcgctggcg gcccggctgc
     4801 gttcctagcc ccagaggtat gcgatcctgg acagtcactc cggagccccc atgaagtcct
     4861 tcttcaagag cttcttcgcc accctgctgg ccctgatggt ggccggcggg ctggccttcg
     4921 tcctgttctt cgggatgctg gcggccatcg gttcctcggg caagcccacg gtgccgggca
     4981 aggcggtgct ggtcttcgat ctggacacca gcctgtccga tggggagcgg gatcccgagc
     5041 ccagcgaggc cctcagtgat gcgctggcgg gtggcgcagc ccggagccag tcccttcctg
     5101 tggccatcga ggctctggat cgggctgccg ccgacagccg catcacggca ttgttcctca
     5161 cgggcagcct gcagaacgcc ggacccgccc agttgcgcga actgcgcgag gccatccagc
     5221 gcttcaaggc gaagaagccc gtgctggcct acaacctggg ctggaccaag cgggactact
     5281 acctggccgc cggcgccacc accgtgttca tcaatccctt cggcgagatg gaggtgaacg
     5341 gcctggccag cgagcccatg ttcttcggcg aggccttcaa gaaatacggt gtggaagtgc
     5401 aggtcacgcg cgtcggcaag tacaagagtg ccgtggagcc cttcatcacc gaccgcatga
     5461 gcgagcccaa ccgcgagcag atccagaagc tgctgaacga catctggtcc gagtggaagg
     5521 acacggtggc gaaggaccgc aagaagacgc ctgcggacct gcaggtcatc gcggacgaaa
     5581 agggcctggt ggaagccgag gatgcccgga agctgggcct ggtggaccgc atcgcgccct
     5641 acgacgaggt gctcgacgag ctgaagaagc tggcgggcaa gcaggcgaag gacaaggact
     5701 tcccccagat cacgctggcc acctatgcgg ggatccctgg cgacgccaag agcggcaagg
     5761 cccgcatcgc cgtggtggtg gcggaaggcg agatcgtgga tggcgagggc aagtccagcc
     5821 aggtgggcgg cgaacgcctc agccgcgagc tgcgccgcct gcgcctggac gaccgcatca
     5881 aggccgtggt cctgcgggtg aacagccccg gcggcagcgc gtcggcttcg gagctcatcc
     5941 agcgcgaagt catcctcacg aagaaggtga agccggtggt ggtctccatg ggccatctgg
     6001 cggcctccgg cggctactgg atcagcacct atggcgaccg catcttcgcg gaacccagca
     6061 ccatcacggg gtccatcggc gtcttcggcc tgctgcccaa cgtgaagaag ctggccaacg
     6121 gccacggcat cacctgggac agcgtgcaga ccgcgcggct ggccaatccc atgaccctga
     6181 cgcgccccaa gaacgagctg gaactggcgc gcatccaggg cctggtggac cgcatctacg
     6241 aacagttcgt ggccaaggtg gccgacagcc ggaagatgaa gccggaggcc gtcaaggaga
     6301 tcgcgcaggg ccgcgtctgg tcgggccagg aggccgtgaa gctgggcctg gtggacgagc
     6361 tcggcggcct cggggcggcg gtgaagcacg cggcggagcg gatcaaggcg ggcgatgact
     6421 accaggtggt ggggcccgag cacgagcccg acgccctgaa ggagatcctg aagaacctgg
     6481 gcggcaagtc ccggaaactg gccaagcccg gcccggtgga cacactggcg ggcggactcc
     6541 tccgtcagct ggacgtgctg acttcgctca acgatcccag gggcgtctac gccaggctgc
     6601 ccttcgagat cgagctgaag tagccctgca tggactcgtc ctcgttcgtc tccgcgatcg
     6661 tcctgctggt gctggtgacg gatccccttg gcaacatccc gctcttcgtc gggctgctgc
     6721 gccaggtgga tccggcccgg cgccagcgga tcatcatccg ggaagtgctg ttcgccttcg
     6781 tcatcctgct cttcttcgcg ttcttcgggc agcgggtgct gcgcctcatg cacctcacgg
     6841 acacctcgct gggcatcgcg gggggcgtga tcctcttcct catcgcgttg aagatggtct
     6901 tcccccacgc ggagggccgg gtgggccatc ccatccatgg cgagcccttc ctggtgcccc
     6961 tggccatccc cttcatcgcc ggcccttcgg ccatcgccac ggtgctgctg ctggtgagcc
     7021 gggagccgca ccgcctgtgg gagtggctgg gcgccctgtc cgtggccatg ctcatctcgg
     7081 cggtggtgct gggcttcgcg gagaggatcg cggacttcct gggtgagcag gtcaccatgg
     7141 ccttcgagcg gctcatgggc ctggtgctca cggccatcgc catcgagatg ctgctggcgg
     7201 gcatcgagaa gttcgtgctg cagctgcgcg cagtctaggc cttccgcttg aggctcagct
     7261 ccagcgtgaa ctccgccacg ggttcgaagg tgccgtccgg cagcttcacg gcggcctgga
     7321 tgcgcatggg ttccgtgatg cgctcttcgg aatccagggc ccgccgcacc tggtcccgga
     7381 tggccccgcc ctcctcgcag atgaagtaga catcggattc cgggcgcttg aggaaggagg
     7441 cctggaaggc cttgaagacg agggacacgg gtttccccga gcgcctgatc tggtccatgg
     7501 ccaggaggcc cccggcgcag tccgcgccga tggccaatgc gccgaaatac atggagccaa
     7561 ggtgattgcg ggtccagcgg cggagtggga tgcgcaccac gcagcgggtg tcggtcagct
     7621 cgacgacgct gggccgcacc gaggccagga gggggatctt cagccacccg aacaggcgca
     7681 tgccgaaggt ctgtttcagg cgttcgaatg gggaggacat gcctctgatt gtcagtcccc
     7741 cggcaggttc acgtccagca ggccctcggg cgggtccagg tccaggcggc ggttcggcag
     7801 gtccagggtc caccaggcct tgatgtaggg gatgtcacgc tggcccgtgc gcccggggcg
     7861 cagatcccgc atcaccacca tgtcgtagcc cgcgggcccg gggtccaggc gcagcacctc
     7921 gcccaccttg cgccccccga tgaagacctc gcagccgatc cactggtggc ggaagctctc
     7981 gccttccggc aggtcggcgg cggcttcggg catccacagg gcccagccct tgaggggttc
     8041 ggcggcggtg cggtcgggca catccgtgaa ggcgaggcag ggacggtcct gatgccagcg
     8101 gaagagacgc aaggccacgg agcgggcggg cggggcggcc tcgccatgct cgagatcctg
     8161 ctggggcggg gccagcacca ggccctgcat gccgtccagt ttttccggtt cgtccatgac
     8221 ggcgtggaag aggaactcgc ccttcaatcc ctgcaccttg gccagatgac ctgccagcag
     8281 catggcgcta cgcctcgtcc tggtcgtcca gttcgaggtt caccaccagg cctgccttct
     8341 ccccggcggt cttgcagagg gtgcgcagcg ccgagatcat ccgcccgtgc ttgccgatga
     8401 tgcggccccg gtccatggga tccgcgaaga ccagcacgtc gcgcttgcgg ccctcgcccg
     8461 cgacctcgac ccggagggcc tccggatggt ccagcagggg agtcagcaca tcacgcagga
     8521 aggcttcgaa gttcatggct tctccgggtg aacgaaagaa agccggacct gggcccggct
     8581 ttcgaaggtc ggaaaccggc tacaggatct ggttcttctt gaacagatcg aggacagtct
     8641 tggagggctg ggcgcccttc tggagccagg acttggcctt ctcggcatcg atgcggacct
     8701 cttcgccgga accggcgatg gggttcacga agcccagcac ttccacggcg cggcccgtgg
     8761 ggatgcggtc gttctcggag acgacgatgt ggtagaacgg gcgcttcttg gcaccattgc
     8821 gagcaagacg gatcgaaagc atgggcactc cctgagcagg aaagtgtatc gcggaaaggg
     8881 gttccgccca agtcctaatt cagggcccga aggcggacgg cgggaagctg ccttccagca
     8941 ctgcctggcg ttcctggatg ttccggcgca gcgtgggcca gcgcggatgg gtgcgcatgc
     9001 ggtcgaggaa tggggaggtc tcgtaccagc gggcacagct gaagccctgg acgaaggccc
     9061 gggtggcgca gtccacggcc cggtccgcat cgcccaggag cgaataggct tcagcttcct
     9121 tgaaggtcca ctccccatcg ggaatccgga gcttgccgcg gatgtcgtcg atgcggcgca
     9181 attcggccaa gccatcttcc cgccgcccct ccaggtaggc gaggtagacc cggcagaggt
     9241 cctggaaggg ggccgggcca ccggccatgg ccacccccgc tttcatgtgg gcgagcgccg
     9301 cctggcggtc gccctggagc agggcgtaat agccctggta gaacaccacg ttggcgtcca
     9361 ggcgcacggc cctggcacgc agcagctcct ggccgaaggt gtcccagtcg ccgaggtaca
     9421 ggtaggtggt ctccgcgaac caggaggacg gctgggccat ggcccccagc agcgcctgct
     9481 gtcgggccag ggcccccttg gcgccttcca gcagcccggc ggtgcggccg gcataggcga
     9541 agccatggta gaggtccggg atgccgggac ggagatgggt ggcctgctcc agcacccgca
     9601 gcgcccggtc ctggttgccg gtgtccgtga gcatcaagga ccagaggaa
//
LOCUS       DASUDT010000087         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1484445, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000087 DASUDT010000000
VERSION     DASUDT010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484445"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..502)
                     /gene="purE"
                     /locus_tag="VFV26_01885"
     CDS             complement(5..502)
                     /gene="purE"
                     /locus_tag="VFV26_01885"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEX4844936.1"
                     /translation="MTTIPLVGILMGSKNDWETMKHTVLTLKELGIACEAHVASAHRT
                     PEKVVAFCQGAEGRGLKVIIAAAGGAAHLAGVCASKTHLPVLGVPMKGWATEGMDALL
                     STVQMPTGIPVGTLAIGKAGAINAALLAASILSLGDPSIRERYLAYRKAQTEKALADD
                     DLVMP"
     gene            720..>2217
                     /locus_tag="VFV26_01890"
     CDS             720..>2217
                     /locus_tag="VFV26_01890"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4844937.1"
                     /translation="MRLLGLGLLRGLLDEKAVVEVAGEPDPIVTLQHRGLLEPEEATA
                     LARILDSGALPSPFPGTDGAPLPAIHGKGQSPWDSLPPAGPHSDGSGRQVLRALTLAT
                     WKHYRDLRFLAEGGMGRVFKAYDPTLKRPVALKFLRRDDPEMAARFAQEAQHQAMVEH
                     PRICRVYEVGEWQGQSYIAMQYIEGETLDAAIPNLSLAEKIQVMEEVAEAIHAAHHAR
                     LIHRDLKPANIMVARRGNALEPTILDFGLAKGMDAEGLTQQGLAMGSVHYMAPEQVRG
                     HHDRINRRTDVYGLGAALHKVLTGEPPFGAYEGVEVFRRTIETDVPPLRRLVPDLPSD
                     LDTLTRKCLEKDPARRYDSALAVAEDLRRWREGEPILARRPTVPYLAAKWARRHKLVM
                     AVGGVALLGLLVLGGFALATASSAWARVRHAQHFGQEAERIEALLRYSHLLPPHDVRP
                     VLDQARTRMAALEQEARRAGRLATGPADYALGRGHLALGDHERAKERLE"
BASE COUNT          355 a          785 c          745 g          332 t
ORIGIN      
        1 catgtcaggg catcacgaga tcgtcgtcgg ccagggcctt ttccgtctgg gccttgcggt
       61 aggcgaggta ccgttcgcgg atcgagggat cgcccagcga caggatggaa gcggccagca
      121 gcgccgcatt gatggcgccc gccttgccaa tggccagggt gcccaccgga atgcccgtgg
      181 gcatctgcac cgtcgaaagc agggcgtcca tgccctccgt ggcccagccc ttcatgggca
      241 cgcccagcac gggcagatgg gtcttgctgg cgcagacgcc cgccagatgg gctgctccac
      301 ctgccgcggc gatgatcacc ttcagacccc ggccctcggc gccctggcag aaggccacca
      361 ccttttccgg cgtgcggtgg gcgctggcca catgggcctc gcaggcgatg cccagctcct
      421 tcagcgtcag gaccgtgtgc ttcatggtct cccagtcgtt cttggagccc atcaggatgc
      481 ccaccagagg gattgtcgtc atggatgcct cggctgtttc aacatggttg gtagagggac
      541 aggagcccct tgggcctccg gagggaatcc gcggaccggc gccctggaag ggccatgtta
      601 tcggagccgg cttcgcctgg ctcgcccaac cttggcctgg ccttgagagc cgctggccga
      661 tgttgcacac tcgcaggaac gcattggacg ggagccgggc cgtggacaga gaacgccagg
      721 tgcgattgct cggcctgggc ctgctccgcg gcctgctgga tgagaaggct gtcgtcgaag
      781 tggcgggaga gcccgatccc atcgtaactc tgcagcaccg cggcctcctg gaaccggagg
      841 aggccacggc cctggcccgg atcctggaca gcggggccct gccctccccc ttcccgggca
      901 ccgatggagc tcccctcccg gccatccatg gaaaaggcca aagcccctgg gacagcctgc
      961 cgccggccgg cccccactcc gatggcagcg ggcggcaggt gctgagggcc ctcacgcttg
     1021 ccacgtggaa acactaccgc gacctgcgct tcctggcgga aggcggcatg gggcgggtgt
     1081 tcaaggccta cgatcccacc ttgaaacggc ctgtggcgct caagttcctg cggcgggacg
     1141 atcccgagat ggccgcgcgc ttcgcccagg aggcgcagca ccaggccatg gtcgagcacc
     1201 cccgcatctg ccgcgtctac gaggtgggcg agtggcaggg ccagagctac atcgccatgc
     1261 agtacatcga gggggaaacc cttgatgcgg ccattccgaa cctctccctg gcggaaaaga
     1321 tccaggtgat ggaggaggtg gccgaggcca tccacgccgc ccaccacgcc cgcctcatcc
     1381 accgcgacct caaacccgcc aacatcatgg tggcccggcg gggcaacgca ctggaaccga
     1441 ccatcctgga cttcggcctg gccaagggca tggacgccga aggattgacc cagcagggcc
     1501 tggccatggg ctccgtccac tacatggccc cggagcaggt gcggggccac catgaccgca
     1561 tcaaccggcg cacggatgtc tacgggctgg gcgccgccct gcacaaggtg ctgacggggg
     1621 agcccccctt cggggcctac gagggcgtgg aggttttccg ccgcaccatc gaaaccgatg
     1681 tgccacctct gcggcgcctc gttccggacc ttccgtctga cctcgacacc ctcacgcgga
     1741 aatgcctgga aaaggatccc gcccgccgct acgacagcgc cctggctgtg gccgaagatc
     1801 tgcgccggtg gagggagggc gagcccatcc tggcccgcag gccgacggtg ccctatctgg
     1861 ccgcgaaatg ggcccggcgg cacaagctgg tcatggccgt gggcggcgtg gcgctgctgg
     1921 gcctcctggt cctcgggggc ttcgccctcg ccaccgcctc ctcagcctgg gcccgcgtcc
     1981 ggcacgcgca gcacttcggc caggaagcgg aacgcatcga agccctgctg cgctactccc
     2041 acctgctgcc cccccacgat gtgcgccccg tgctggatca ggcccgcacc cgcatggcgg
     2101 ccctggaaca ggaggcccgg cgtgccgggc gtctggccac aggccccgcg gactatgccc
     2161 tgggtcgcgg ccatctggca ctgggagacc atgagcgggc caaggaacgc ctggagg
//
LOCUS       DASUDT010000088         2408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1616880, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000088 DASUDT010000000
VERSION     DASUDT010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616880"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VFV26_01895"
     CDS             complement(<1..628)
                     /locus_tag="VFV26_01895"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4844938.1"
                     /translation="MPNSHSHGLDLKGFLLRIDRLDAISRLQQAEARVRALEGRLQEL
                     SLLDPVTGLANHRHFADRLAQALRLAQRHGHVLSVLFLDLDRFKRVNDLLGHQGGDEL
                     LRLVGQRLQGALRQGDTLACMGGGRFMALLPEIKDVMAAARVGQKLLEALQPPFRAGA
                     RELDLTASIGVCVHPQDGLDAATLQAHAESAMYRAKERGGNRLECFTST"
     gene            complement(753..2261)
                     /locus_tag="VFV26_01900"
     CDS             complement(753..2261)
                     /locus_tag="VFV26_01900"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX4844939.1"
                     /translation="MLGSWDLAIALDRSNAEPLYLQLVKALEEGIRNGRFKPGDALPG
                     TRAMAELLGVNRNTALAAYRELEAEGWIEVAPDRGTFVARKQPFVLEAATGISAQDSA
                     SWKRATPRSGPFFQPGAPALESFQLIPDTTDLRLAPTDAIHRAYGRVLKLHPERLLQP
                     GWDPRGFLDLRNSLGKMLRDMRGLSVEAGNLLLTRGLMSTLNLVSRVLFAPGDAVAVE
                     NPGLFRVAEAFRSAGARLFPVPVDAQGLDVEALEALLVQEPIRLLYLTASPQHPTQVT
                     LDAARRARLLELSRVHGFRILEGDPSLGFHREKNPSLPLAAEDPHGRVLYFSSFEQIL
                     APGLQVGFLAGEAGLIKALAQQRQLVDWPGNLVQEATIEETLRDGEIARHLRRIRKLT
                     EERRETMVDRLLLHLHPAISVKNPQEGLSLWVRVAEGVPLEAWTERCLAHGVVFYPGA
                     LYDLHRQTLPRICLGFAAHTLDEQNEACSRMALALKEARAGLPRDRNPAPRR"
BASE COUNT          357 a          806 c          897 g          348 t
ORIGIN      
        1 gggtgctggt gaagcactcc agccggttgc cgccccgctc cttggcgcgg tacatggcgc
       61 tctccgcatg ggcctgcagg gtggcggcgt cgagaccatc ctggggatgc acgcagacgc
      121 cgatgctggc ggtgaggtcc agttcccgcg cgccggcgcg gaagggcggc tggagcgcct
      181 ccagcagctt ctgccccacc cgggccgccg ccatgacgtc cttgatctcc ggcagcaggg
      241 ccatgaagcg gcccccgccc atgcaggcca gggtgtcgcc ctggcggagg gccccctgga
      301 ggcgctgccc caccagccgc agcagctcgt cgccaccctg gtggcccagc aggtcgttga
      361 cgcgcttgaa gcggtccaga tccaggaaga ggacgctgag cacatggccg tgccgctggg
      421 ccaggcgcag ggcctgggcc agccggtcgg cgaagtggcg gtggttggcg agcccggtga
      481 cggggtccag caggctcagt tcctgcagcc gcccctccag cgcccggacc cgcgcctcgg
      541 cctgctggag ccggctgatg gcatcgagac ggtcgatcct gagcaggaag cccttgaggt
      601 cgagcccgtg ggaatgcgag ttcggcaaat gggctcccgg tgatgggtga atcctaatga
      661 ttgaacccga attgcgccag gaggaaaggg tttgtctatg taaaaatcga tgaacaggga
      721 atcgtgaaac cggatgacga agcccccgcg cctcagcgcc tgggggcggg gttccggtcg
      781 cgtggaaggc cggcgcgggc ctccttcagg gcgagggcca tgcgcgagca ggcctcgttc
      841 tgctcgtcga gggtgtgggc cgcgaatccc aggcagatgc gggggagggt ctggcggtgc
      901 aggtcgtaga gggccccggg atagaagacc accccgtggg cgaggcagcg ctcggtccag
      961 gcctccagcg gcaccccctc ggccacgcgc acccagaggg agagcccctc ctgcgggttc
     1021 ttcacggaga tggccgggtg caggtgcagc aggagccggt ccaccatggt ctcccggcgt
     1081 tcttcggtga gcttgcggat gcgccggagg tgccgggcga tctcgccgtc gcgcagggtc
     1141 tcctcgatgg tggcctcctg gaccaggttc ccgggccagt ccaccagctg ccgctgctgg
     1201 gccagggcct tgatgaggcc ggcctcgccc gccaggaacc ccacctgcag tcccggggcg
     1261 aggatctgct cgaagctgct gaagtagagc actcggccat ggggatcctc ggcggccagg
     1321 ggcaggctgg ggttcttctc ccggtggaaa cccaggctcg gatccccctc caggatccgg
     1381 aacccatgca ccctggacag ctccagcagg cgcgcccgcc gggcggcgtc cagcgtcacc
     1441 tgggtggggt gctgggggct ggcggtcagg tacagcaggc ggatgggctc ctggaccagc
     1501 agggcttcga gggcctccac atccaggccc tgggcatcca cggggaccgg aaacagccgc
     1561 gcccccgcgg accggaaggc ttcggccacc cggaagaggc ccgggttctc cacggccacc
     1621 gcatcccccg gggcgaagag cacgcgggag accaggttga gggtgctcat caggccgcgg
     1681 gtgagcagga ggttgccggc ctccacggac aggccccgca tgtcgcgcag catcttgccc
     1741 agcgagttcc gcaggtcgag aaaccccctg ggatcccagc ccggctgcag cagccgctcc
     1801 gggtgcagct tcagcacccg gccgtaggcc cggtggatgg cgtccgtggg ggcgagccgc
     1861 aggtccgtcg tgtcggggat cagctggaag gattccagcg cgggggcccc cggctggaag
     1921 aagggcccgc tgcggggcgt ggcccgcttc caggaggccg aatcctgggc ggagatcccc
     1981 gtggcggcct ccaggacgaa gggctgtttc cgggcgacga aggtgccccg gtccggggcg
     2041 acttcgatcc agccctccgc ctcgagttcc cggtaggcag ccagggcggt gttgcggttg
     2101 acgcccagca gctccgccat ggcgcgggtt cccggcaggg cgtccccggg cttgaagcgc
     2161 ccgttccgga tgccctcctc gagggccttc accagctgca ggtaaagggg ttccgcattg
     2221 gatcggtcca gcgcgatggc gagatcccag ctgcccaaca tggaactccg tggctcgggt
     2281 cagaatccgg ttgcgggcag atcccgtcaa ggcggccggg atggtccacg gcccaggttg
     2341 gggcccgggt gggcccccgc ccagatccgg tttggaaagg ggaggccctc cggtgccaca
     2401 gacggcct
//
LOCUS       DASUDT010000089         3264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1815729, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000089 DASUDT010000000
VERSION     DASUDT010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815729"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..959)
                     /locus_tag="VFV26_01905"
     CDS             complement(18..959)
                     /locus_tag="VFV26_01905"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX4844940.1"
                     /translation="MHIQELILRLQRFWADRGCLIGQPYDLEKGAGTMNPLTFFGALG
                     SKPWNVAYVEPSRRPADGRYGENPFRVYKHLQFQVILKPSPAKVQELYIESLEALGID
                     LSKHDLRFEEDNWESPSLGAWGVGWQVVLDGMEISQFTYFQQVGGLDCRPVSAELTYG
                     IERICMFLGGYDNIFDLVHGEVKTDDGVFPVTYGQMRQREEFELSAYSFEHADLDLHR
                     TLFEAFEKEGWRLLKDHGHFLSAYEQALKMSHTFNVLDARGAVSTTERPGIIKRVRDL
                     ACACARAYLEFENGKTPTAENAEGVEKSVNAGKGGAK"
     gene            1018..1551
                     /locus_tag="VFV26_01910"
     CDS             1018..1551
                     /locus_tag="VFV26_01910"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4844941.1"
                     /translation="MLIRPALSTEAQDLAVLGRRLWRETYTGLIPESNLAMHLTETFG
                     SVQQAAELADPACRILVIEHDGALLGYALLRAGGPDPEPPSFHFVKPLEVARFYVDAS
                     LHGQGAAQQLMAAALDHAASAGHDGVWLQVWEQNPRAIRFYAKAGFIDAGDATYRIGN
                     QVDRDRLLVHGLMVRPL"
     gene            1602..2549
                     /locus_tag="VFV26_01915"
     CDS             1602..2549
                     /locus_tag="VFV26_01915"
                     /inference="COORDINATES: protein motif:HMM:NF009007.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEX4844942.1"
                     /translation="MTRKIALLAIGGNALLKEKERGLQEEQLENARETAEMLARVVAE
                     GYALCVVHGNGPQVGNLLIQQEAGSGQIPPYSLDICGAMTQGSMGYMLERMLINRLRF
                     LGVEAPVTSVLTEVVVDKEDKGFQDPTKPVGPFYPEFRALELMKAKRWKMKEDSGRGW
                     RKVVPSPKPIEIVQLDAIKTLLQSGSSVIAGGGGGIPVIRDASGFLVGVEAVIDKDRL
                     SALLAAQLGADLFIILTGVAKVAIDFGKPTQAWVDRLTASEARRHLAEGQFPPGSMGP
                     KIESALAYLEGGGHEVLITTAEALATEDPTTVGTRIVRD"
     gene            2625..2918
                     /locus_tag="VFV26_01920"
     CDS             2625..2918
                     /locus_tag="VFV26_01920"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4844943.1"
                     /translation="MYALMLVRYRRPLPEIEAVTQAHRAYLRTLKEQGVLLASGPMDP
                     RNGGMFLLRVQDADPLADLDTIRDNDPFFKAGLANYEPLVWNVVMGKEALDQI"
BASE COUNT          545 a         1116 c         1023 g          580 t
ORIGIN      
        1 gaaggtcttc gtgccgctca cttcgcacct cccttcccag cattcacgct tttctcgacg
       61 ccctccgcgt tctctgcggt tggcgttttc ccgttctcga actccaggta cgcccgggcg
      121 caggcacacg ccaggtcgcg cacgcgcttg atgatgcccg gccgctccgt ggtgctcacg
      181 gcgccgcggg cgtccagcac gttgaaggtg tggctcatct tgagggcctg ctcgtaggcg
      241 ctgaggaagt ggccgtggtc cttgagcagg cgccagccct ccttctcgaa ggcttcgaag
      301 agggtgcggt gcaggtccag gtccgcgtgc tcgaagctgt aggcactgag ctcgaactcc
      361 tcgcgctggc gcatctggcc gtaggtcacg gggaacacgc cgtcgtccgt cttcacctcg
      421 ccatgcacca ggtcgaagat gttgtcgtag ccgcccagga acatgcagat gcgctcgatg
      481 ccgtaggtca gctcggcgct cacgggccgg cagtcgagcc cgcccacctg ctggaagtag
      541 gtgaactggc tgatctccat gccatccagc accacctgcc agcccacgcc ccaggcgccc
      601 agggaaggtg attcccagtt gtcctcctcg aagcgcaggt cgtgcttgga caggtcgatg
      661 cccagggcct ccaggctttc gatgtagagc tcctgcacct tggcggggct gggcttgagg
      721 atcacctgga actggaggtg cttgtagacg cggaaggggt tctcgccgta gcggccgtcc
      781 gccgggcgcc gcgagggctc cacataggcc acgttccagg gcttgctccc cagggctccg
      841 aagaaggtga gcggattcat ggtgcccgcg cccttttcca gatcgtaggg ctggccgatg
      901 aggcagcccc ggtcggccca gaaccgctgc aagcggagga tcagttcctg gatgtgcatg
      961 ggggctcgcc aaaacgagca ttctagcggg ttttcgggcc tttgataagc tacgaggatg
     1021 ctcatccgcc ccgccctttc caccgaagcc caggacctgg cggtcctggg caggcgcctc
     1081 tggcgcgaaa cctacacggg gctgattccc gaatcgaacc tggccatgca cctgaccgag
     1141 accttcggct cagtccagca ggccgcagaa ttggcggatc cggcctgccg gatcctggtg
     1201 atcgaacacg acggcgccct gctgggctat gccctgctcc gggccggtgg ccccgatccg
     1261 gaaccaccct ctttccactt cgtcaaaccc ctggaagtgg cgcgattcta tgtggacgca
     1321 tctctgcatg ggcagggcgc cgcccagcag ctgatggcgg ccgccctgga ccatgcggcc
     1381 tccgcgggcc acgacggcgt ctggttgcag gtctgggagc agaatccccg cgccatccgg
     1441 ttctacgcca aggccggttt catcgatgcc ggcgacgcca cctatcgcat cggaaaccag
     1501 gtggaccggg accggctgct ggtccacggc ttgatggttc gtccactgtg atggccgtcc
     1561 gcccggcacc ttgctagaat cccggtttcc cggggatctg catgacccga aaaatcgccc
     1621 tcctggccat cggcggcaac gccctgctga aggagaagga acgcgggctc caggaggagc
     1681 agctggagaa cgcccgggag accgctgaga tgctggcccg ggtggtggcc gagggctatg
     1741 ccctctgcgt ggtccacggc aacgggcccc aggtgggcaa cctgctcatc cagcaggagg
     1801 ccgggtcggg ccagatcccg ccctacagcc tggacatctg cggcgccatg acccagggtt
     1861 ccatgggcta catgctggag cgcatgctca tcaaccgcct gcgcttcctg ggcgtcgagg
     1921 cccccgtgac gtccgtcctc accgaggtgg tggtggacaa ggaggacaag ggcttccagg
     1981 accccacgaa accggtgggt cccttctatc ccgagttccg cgccctggaa ctcatgaagg
     2041 ccaagcgctg gaagatgaag gaggactcgg gccgcggctg gcgcaaggtg gtgccctcgc
     2101 ccaagcccat cgagatcgtc cagctggacg ccatcaagac cctgctgcag tccggcagct
     2161 ccgtcatcgc cggcggcggc ggtggcattc ctgtgatccg ggatgccagc ggcttcctgg
     2221 tgggggtgga ggccgtcatc gacaaggacc gcctcagcgc cctgctggcg gcccagctcg
     2281 gcgccgatct gttcatcatc ctcacgggcg tggccaaggt ggccatcgac ttcggcaagc
     2341 ccactcaagc ctgggtggat cgcctcacgg ccagcgaagc ccggcggcac ctggcggagg
     2401 gccagttccc gcccggcagc atgggcccca agatcgaaag cgccctggcc tatctggaag
     2461 gcggcgggca tgaagtgctc atcaccaccg ccgaggccct ggccaccgag gatcccacca
     2521 ccgtggggac gcggatcgtg cgggactgag ttcggcactc ggcgcacgac ccgcttttca
     2581 tcctggtgca tccatgctca tctggggcaa atcctggagt gccgatgtac gccctcatgc
     2641 tcgtccgcta ccgccgtccg ctgcctgaga tcgaggccgt cacccaggcc caccgcgcct
     2701 acctccgcac gctgaaggag cagggcgtcc tgctggcctc gggccccatg gatccccgca
     2761 atggcggcat gttcctcctg cgcgtgcagg atgcggatcc cctggcggac ctcgacacca
     2821 tccgggacaa cgatcccttc ttcaaggccg gcctcgccaa ctacgagccc ctcgtatgga
     2881 acgtggtgat gggcaaggaa gccctcgacc agatctgaac ccggcacgcc tgcaccagcc
     2941 cccgccgacc gctccgcgcg cggccagtgg ggctggcgca gcgtacccgt gaaggcacga
     3001 tcttgctgct ggcaagaaat acatgcgaat ccaaagggga ccgaacctgg aatccgatcc
     3061 ggatttttct gttttttatt catgatgtgg tgatcaccat cacaccctgg ccatcaaacc
     3121 tcacccgtcc ttgttcaaag ccgatggggg gactgtccct cgctttttcc ttctccactt
     3181 gaaggccacc cacccattca cgcccttcac cggaggtcct ccatgaagtt cctggacaac
     3241 atcaaggtcg gtcccaagct catc
//
LOCUS       DASUDT010000090         4969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_998548, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000090 DASUDT010000000
VERSION     DASUDT010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4969
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998548"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1766
                     /locus_tag="VFV26_01925"
     CDS             <1..1766
                     /locus_tag="VFV26_01925"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4844944.1"
                     /translation="KAKKAIRDMADELLKLSAQRKLEKGHAYPPDGPDMAAFDASFPF
                     TPTPDQVEAIEAVKADLESPRPMDRLLVGDVGFGKTEVAMRAAAKVALEGRQVAVLCP
                     TTVLCFQHFRTFKERFAGFPIRIEMLNRFVDPAEQKRILQEVGDGKVEIVIGTHQMLG
                     AKVKFADLGLVVIDEEQRFGVSHKEKLKKLRLNVDQLALSATPIPRTLHMSLTGLREI
                     SLIETPPKDRLAIETVVAPWSDELVQTAIQFELRRGGQVYLVHNRVESIVSIAARVRE
                     LVPDARVGVGHGQLTDEGLEQVMVGFMEGRIDVLVATTIVENGLDVPNANTLIVHRAD
                     AFGLSQLYQLRGRVGRSDVPAYAYLLIPPKHEISDDARKRLQALEDFSELGSGFRVAA
                     MDLELRGAGNLLGGEQSGHIHDIGFELYVKLLEETLSELQGQPSGTFEVKLDHLAPGA
                     QLSRRWIDQAAERLVAYKRISRLREEKDLELYKLDLEDRFGRIPEDDPDTLRFFELLK
                     VKLRAQALGVSEVAVEKGQLKLRLSPQTALDPAKLMAWVGQQKGASLSPDGAVRLPLL
                     GTEDGPVLQAQRVLAAWAGLG"
     gene            1869..3281
                     /locus_tag="VFV26_01930"
     CDS             1869..3281
                     /locus_tag="VFV26_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844945.1"
                     /translation="MLSFLMSEVASLGRVLQTLTAFILALVLGSTVLHSAEVKPEPRI
                     VSLKGFEAVEVRSQGFTLPRAMKVHVYAKGGGLRRVMHTRSDTPLFASGWILNAATRE
                     VVWQMDGSNTKRDWEYRVADQYLDLPAGSYEAYFGNHGFGQSLLLAQWTRNIDRRALS
                     SERSERPRGFLAAFGADRASQLRHWQEQVGNYGLEIYLPGGDPAQVPLFEAPLRWKNI
                     VVALGAATDNGHWNQAFRVKKPVALHIYAEGEGSGRRMHDHGWIIDARTRVRVWEMTM
                     EKAQFAGGGRKNRRQVETIQLPAGDYEATFVTDDSHSPADWNAAPPCDPGMYGLTLAA
                     PSDTDLAAISLTKPMAQPVVAELIGVGNGQDRSAPFALAGAHSLRIHAIAESGGGEMA
                     DEAWIEDAAGQRVWVMDYSRTHHAGGASKNRLADEVVNLPKGRYTLRFRTDDSHASGQ
                     WNSPAPWDPERYGVTVYGSR"
     gene            complement(3345..4538)
                     /locus_tag="VFV26_01935"
     CDS             complement(3345..4538)
                     /locus_tag="VFV26_01935"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844946.1"
                     /translation="MTPPTVLVVDDEELFLRTALDGFAGSSSDLTVLTAKNGKLAAQI
                     LDDRHVDLVVTDLKMPEMDGYGLLSHMSRHHPGIPAIVMTAFGTPEIEGRLRNQGVTC
                     VLDKPFDFPRLQKAVSQALSAMASGHLTGISLATFLQMIQIERKTCVVRVASKEGQGL
                     LHFKEGQLIQAELGETSGDAAALTILAWEESVIELLKVRTPTRGQPMQSLPTLLMEAC
                     RIKDESRMNATSDPKPPPSEAIPLTPEDLEDLLPLKPSSSTLTSHKEHPMAAADKLKE
                     LAQIDGFAGCGLFTPTGEALAILGADGVNLKDIGVLANNVLMNAQKASLDMGTGRGQQ
                     VHVEAEHAHILVRCLNEGTDPLRSMPGKAHIHLVMILKSDSSIGMAKLKIGSVIAKLA
                     DDFRV"
     gene            complement(4667..>4969)
                     /locus_tag="VFV26_01940"
     CDS             complement(4667..>4969)
                     /locus_tag="VFV26_01940"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4844947.1"
                     /translation="LATYAWPGNVRELKNVLERAYLLEAPPSTFLLGPGMPGPVSAPT
                     AQGAASLQTLEELEQAHLLHALRLHQGNYTRTAEALGISLSTLKRRVKERPALGSI"
BASE COUNT          837 a         1619 c         1719 g          794 t
ORIGIN      
        1 gcaaggccaa gaaggccatc cgcgacatgg ccgacgagct gctgaagctc tctgcccagc
       61 gcaagctgga gaagggccac gcctaccccc cggacggccc cgacatggcg gccttcgacg
      121 ccagcttccc cttcacgccg acgccggacc aggtggaggc catcgaggcc gtgaaggccg
      181 atctggagtc gccgcgcccc atggaccgcc tcctggtggg cgacgtgggt ttcgggaaga
      241 ccgaagtggc catgcgcgcc gcggcgaagg tggccctcga aggccgccag gtggccgtgc
      301 tgtgccccac caccgtgctc tgcttccagc acttccgcac cttcaaggag cgcttcgcgg
      361 gcttccccat ccgcatcgag atgctcaacc gcttcgtgga ccccgccgag cagaagcgca
      421 tcctccagga ggtgggtgac ggcaaggtgg agatcgtcat cggcacccac cagatgctgg
      481 gtgccaaggt gaagttcgcg gacctgggcc tggtggtcat cgacgaggag cagcgcttcg
      541 gcgtgagcca caaggagaag ctgaagaagc tgcgcctgaa tgtggaccag ctggcgctga
      601 gcgccacgcc catcccccgc accctgcaca tgagcctcac gggcctgcgc gagatcagcc
      661 tcatcgagac gccgcccaag gaccggctgg ccatcgagac cgtggtggcg ccctggagcg
      721 acgagctggt gcagaccgcc atccagttcg agctgcgccg cggcggccag gtgtacctgg
      781 tgcacaaccg cgtggaatcc atcgtcagca tcgccgcccg cgtgcgcgag ctggtgccgg
      841 acgcccgggt gggcgtgggc cacggccagc tgacggacga gggactggaa caggtgatgg
      901 tcggcttcat ggagggccgc atcgacgtgc tggtggccac caccatcgtg gagaacggcc
      961 tggacgtgcc caacgccaac acgctcatcg tgcaccgggc cgacgccttc ggcctcagcc
     1021 agctctacca gctgcggggc cgcgtgggcc gcagcgacgt gccggcctac gcctacctgc
     1081 tcatcccgcc caagcacgag atcagcgacg acgcccgcaa gcggctccag gccctggagg
     1141 acttctcgga gctgggctcg ggcttccgcg tggcggccat ggatctcgag ctccgcgggg
     1201 cgggcaacct gctgggtggc gaacagtccg gccacatcca cgacattggc ttcgaactct
     1261 acgtgaagct gctggaggag acgctctcgg agctgcaggg ccagcccagc ggcaccttcg
     1321 aggtgaagct cgaccacctg gcccccggcg cccagctgag ccgccgctgg atcgaccagg
     1381 ccgccgagcg cctggtggcc tacaagcgca tctcgcgcct ccgcgaggag aaggacctgg
     1441 aactctacaa gctggacctg gaggaccgct tcggccgcat tcccgaggac gacccggaca
     1501 cgctgcggtt cttcgaactg ctgaaggtga agctgcgggc ccaggccctg ggcgtttccg
     1561 aggtggccgt ggagaagggc cagctcaagc tccgcctcag cccccagacg gccctggacc
     1621 ccgcgaagct catggcctgg gtgggccagc agaagggcgc cagcctcagt cccgacggcg
     1681 ccgtgcgcct gcccctgctg ggcaccgagg acggccccgt gctccaggcc cagcgtgtgc
     1741 tggcggcgtg ggccgggctg ggctgacccc gccggccttc caccggcacc gtccgtccat
     1801 tggccggttc ggtgggattc ccggggcggg ggcgcctacc ttgaaaggcg ttccacctgg
     1861 gggttcccat gctgtccttc ctgatgtccg aagtggcctc cctgggccgc gtgctccaga
     1921 cgctcaccgc cttcatcctg gccctggtcc tcgggtccac tgtcctgcac agcgcggagg
     1981 tgaagcccga gccccgcatt gtctccctca agggcttcga ggccgtggag gtgcgcagcc
     2041 agggcttcac cctgcccagg gccatgaagg tccatgtgta cgccaagggc ggcgggctcc
     2101 ggcgcgtgat gcacacccgc agcgacaccc cgctcttcgc cagcggctgg atcctcaacg
     2161 ccgccacccg cgaggtggtc tggcaaatgg acggatccaa caccaagcgg gactgggaat
     2221 accgggtggc cgatcagtac ctcgacctgc ccgccgggag ctatgaggcc tatttcggca
     2281 accacggctt cggccagagc ctcctgctgg cccagtggac ccggaacatc gaccggcgcg
     2341 ccctgtcctc ggagcggtcc gagcgccccc gcggcttcct ggcggccttc ggcgcggatc
     2401 gggccagcca gctgcgccac tggcaggagc aggtggggaa ctacggcctg gagatctacc
     2461 tgccgggcgg ggatcccgcg caggtgcccc tctttgaggc acccctgcgc tggaagaaca
     2521 tcgtggtggc cctcggcgcc gccaccgaca acggccactg gaaccaggcc ttccgcgtga
     2581 agaagcccgt ggcgctccac atctacgccg agggcgaggg cagcgggcgg cgcatgcacg
     2641 accacggctg gatcatcgat gcccgcaccc gggtgcgcgt gtgggagatg accatggaga
     2701 aggcccagtt cgccggtggc gggcgcaaga accgccgcca ggtggagacc atccagctgc
     2761 ccgcagggga ctacgaggcc accttcgtca ccgatgattc ccattccccg gcggactgga
     2821 atgccgcccc gccctgcgac cccgggatgt acggcctgac gctggccgcg ccgtcggaca
     2881 cggacctggc ggcgatctct ctgacgaagc ccatggccca gcccgtggtg gccgagctga
     2941 tcggtgtcgg caacggtcag gatcgcagcg cgccctttgc ccttgccggg gcccattccc
     3001 tgcggatcca cgccatcgcc gaaagcggcg gcggggagat ggccgacgag gcctggatcg
     3061 aggatgccgc gggccagcgg gtttgggtca tggattacag ccgcacccac catgcgggcg
     3121 gtgcctccaa gaaccgcctg gccgacgagg tggtcaacct gcccaagggg cgctacaccc
     3181 tgcgcttcag gaccgacgac agccacgcct ccggccagtg gaacagcccg gcgccctggg
     3241 accctgaacg ctacggggtg acggtctacg gatcacgatg agcccaaggc ggcaggggcc
     3301 ccggtggaga gcggatcccc tgccgcttcg atgcgccgga ggtctcagac gcggaaatcg
     3361 tccgccagct tggcgatcac ggaaccgatc ttgagcttgg ccatgccgat ggacgagtcg
     3421 ctcttcagga tcatgaccag atggatgtgg gcctttccgg gcatggagcg gagggggtcg
     3481 gtgccttcgt tgaggcagcg cacgaggatg tgggcgtgtt ccgcctccac atgcacctgc
     3541 tggccccggc cggtccccat gtcgagggag gccttctggg cgttcatcag cacgttgttg
     3601 gccaggaccc cgatgtcctt gaggttcacg ccatcggcgc cgaggatggc aagcgcctcg
     3661 ccggtggggg tgaacaggcc gcagcctgcg aacccgtcga tctgggccag ttctttcagt
     3721 ttgtcagcag cagccatggg gtgctcctta tgggaagtga gggtggatga agagggcttg
     3781 aggggtagga ggtcttcgag gtcctcgggg gtaagcggga tggcttccga gggtgggggt
     3841 ttgggatcag aggtcgcatt catgcgggac tcgtccttga tgcgacaggc ctccatgagc
     3901 agggtcggca gggattgcat gggctgtccg cgagtgggtg tgcgaacctt caggagctcg
     3961 atgacggatt cctcccaggc gagaatggtc agggccgcgg catcccctga cgtttctccg
     4021 agctcggcct ggatgagttg accctccttg aagtggagga gcccctggcc ttcctttgac
     4081 gccacgcgca ccacacaggt tttgcgctcg atctggatca tctggaggaa ggtggccagg
     4141 ctgatgccgg tgaggtggcc actggccatg gctgagagag cttggctgac ggctttctgg
     4201 aggcgcggaa aatcgaaggg cttgtcgagc acacaggtga cgccctggtt ccgcaggcgg
     4261 ccttcgatct ccggggtgcc aaaggcggtc atgacgatgg cggggatacc cgggtggtgg
     4321 cggctcatgt gggagaggag cccgtagcca tccatttcag gcatcttcag gtcggtcacg
     4381 acgaggtcca catgccggtc atcaagaatc tgggcggcca atttgccgtt cttcgcggtg
     4441 agcacggtca ggtccgagga agatccggca aaaccgtcca acgctgtcct caggaacagc
     4501 tcctcatcgt ccacgaccag cacagtcgga ggggtcatcg cgaaacatcc atgccccgag
     4561 gagagcaggg aaggtgccaa tatttaaatc atttaaaatc aattattaaa cgatcttgat
     4621 cgcagggatt gattcaaaat gaaccagcca atccggcccg gaaaagtcag attgacccga
     4681 gggccgggcg ctccttgacc ctgcgtttga gggtcgaaag tgagatgccg agggcctcgg
     4741 ctgtgcgcgt gtaattgccc tggtgcagcc ggagggcgtg gaggagatgt gcctgctcca
     4801 gttcctccag ggtctggagg gaggccgcgc cctgggctgt gggtgcggag acgggcccgg
     4861 gcatgccggg gcccagcagg aaggtggagg gtggcgcttc gagaaggtag gcgcgttcca
     4921 ggacattctt cagttcgcgc acatttcccg gccaggcgta ggtggccag
//
LOCUS       DASUDT010000091         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2169448, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000091 DASUDT010000000
VERSION     DASUDT010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2169448"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VFV26_01945"
     CDS             complement(<1..1055)
                     /locus_tag="VFV26_01945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX4844948.1"
                     /translation="MAATTGAAKIAGLYALISAVWILASDRLVQILAPNAAWMTGLSI
                     LKGWLFVAVTATMLFFMVKRLVAGLASREAQLHTLIHTIPDLVWLKDPHGIYLACNRA
                     FERLFGAAEADIVGKTDHDFVPKDLADFFRQKDREALEAGGPRVNEEWVTMADSGERV
                     LLETLKTPMRDGTGALVGVLGIGRDMTLHHALVRDQARLQAQLHQAQKMETVGRFAGG
                     VAHDYNNMLGVILANADLALHQMDPDRPERKFVGEIVKAARHSADLTAQMLAFARRQP
                     LDPKVVDLNQAVEDLRGVLERMAGPRIQLVWSPGQDLWPIRVDPTQLDQVVTNLVVNA
                     RDAIQGEGRIELETRNAV"
     gene            complement(1170..1907)
                     /locus_tag="VFV26_01950"
     CDS             complement(1170..1907)
                     /locus_tag="VFV26_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX4844949.1"
                     /translation="MKPLRVALADDEPLARARLARLLREAGCEVKAELADGAAVLAWL
                     QEPKEVDALFLDIQMPGATGLEVAAELADGRQVPPVVFVTAHSEHAVRAFEAAAADYI
                     LKPVSAERLARTLDRLREGGARRSEPGPSPSQRFPVKAGEGHAFLDLKRTTHFEVEEE
                     IVWAWALAQGVPSRHRTAWTTLAEVEAAFPGEAFMRIQRHLLLRPEAVRGLRPLEGGR
                     ASVRLGEGLDLEVSRSATPRLKERLGL"
     gene            complement(1904..>2596)
                     /locus_tag="VFV26_01955"
     CDS             complement(1904..>2596)
                     /locus_tag="VFV26_01955"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX4844950.1"
                     /translation="LLVNLMVGAPMMTIIGGIISFAVITEEEKATAERRLEEAQWVLL
                     RGQLSPHVLFNSLNGLAELVRQDPVAAEQAILDLSELYRALLRHGDRAAAPLGEERAL
                     VQRFLSVEGLRLGTRLRVRWDWDPALDEVLAPPFLLQPLVENALKHGLAPHPDGGELA
                     IILRREGRGLHLGVENTGRGLGLVPGTGVGLRNLEARLQLAYGPAAAFRLRSEGAATV
                     ATVDLPNLEMRR"
BASE COUNT          383 a          949 c          873 g          391 t
ORIGIN      
        1 acggcattcc gggtctccag ctcgatgcgc ccttcgccct ggatggcatc ccgggcgttg
       61 accaccaggt tcgtcaccac ctggtccagc tgggtgggat ccacccggat cggccagagg
      121 tcctggcccg gcgaccagac cagctggatg cgcggtccgg ccatccgctc caggacgccc
      181 cgcaggtcct ccaccgcttg attcaagtca acgaccttcg gatccagcgg ctgccgccgg
      241 gcgaaggcca gcatctgcgc cgtgaggtcc gcggagtggc gcgcggcctt gacgatctct
      301 cccacgaatt tccgctcagg acggtccggg tccatctggt gcagggccag gtccgcgttg
      361 gcgaggatga cccccagcat gttgttgtag tcgtgggcca cgccgcccgc aaagcggccc
      421 acggtctcca tcttctgggc ctggtgcagc tgggcctgca gccgcgcctg atcacggacg
      481 agggcgtggt ggagggtcat gtcgcggccg atgcccagca cgcccaccag ggccccggtc
      541 ccgtcgcgca tgggggtctt gagggtctcc agcagcaccc gctcgccgga gtcggccatg
      601 gtcacccact cctcgttcac ccggggcccg cctgcctcca gggcctcccg gtccttctga
      661 cggaagaaat ccgccaggtc cttcggcacg aagtcatggt ctgtcttccc cacaatgtcc
      721 gcctctgcgg ctccgaagag gcgttcgaag gcgcggttgc aggccaagta gatcccatgg
      781 ggatccttca gccacaccag gtcgggaatc gtgtggatga gggtgtgaag ctgggcctcg
      841 cggctggcca gacccgccac caggcgtttc accatgaaga agagcatggt cgccgtcacg
      901 gccacgaaga gccagccctt caggatgctg agacccgtca tccaggccgc gttcggcgcc
      961 aggatctgca ccaggcggtc cgaggccagg atccacacgg ccgagatcag ggcatagagc
     1021 ccggcgatct tcgccgcacc ggtggtggcg gccatgggcc tggccgttcg gggttgtctg
     1081 gattggggca tggcgtgggg tccgtctgcc aagaggctag cgcactctgc gggcctttgt
     1141 gaaaaccggc atccacgtga ggggcaggat cagagcccca gccgctcctt caggcggggg
     1201 gtggcgctgc ggctcacctc cagatccagg ccctccccca gccgcaccga agcccgccct
     1261 ccctccaggg ggcgcagccc ccgcacggct tccgggcgca ggagcaggtg ccgctggatg
     1321 cgcatgaagg cttctcccgg aaaggcggcc tccacttccg ccagggtcgt ccaggccgtg
     1381 cggtggcggc tcggcacgcc ctgcgccagc gcccaggccc agacgatttc ctcctccacc
     1441 tcgaagtggg tggtgcgctt gaggtccagg aaggcatgcc cttcgccggc cttcacgggg
     1501 aagcgctggg acggcgatgg acccggttcg gaccgccgcg ccccgccttc ccgcaggcgg
     1561 tccagggtcc gggccagacg ttcggcggag accggcttga ggatgtagtc cgcggcggca
     1621 gcttcgaagg cgcgcaccgc atgctccgag tgggcggtga caaagaccac cggcggaacc
     1681 tggcggccgt ccgccagctc cgcggccacc tccagccccg tggccccggg catctggatg
     1741 tccaggaaca gcgcgtccac ctctttcggt tcctgcagcc aggccagcac cgcggcgccg
     1801 tccgccagct cggccttcac ctcgcagccg gcttcccgca gcaggcgcgc caggcgcgcc
     1861 cgggccaggg gttcgtcgtc ggccagggcc acgcgcaggg gtttcatcgg cgcatctcca
     1921 ggttcggcag gtccacggtg gccacggtgg cggccccctc gctccgcagg cggaaggccg
     1981 ccgccggacc gtaagccagc tggagccggg cctccagatt cctcagcccc acgccggtcc
     2041 ccggcaccag gcccagaccc cgacccgtgt tttccacccc caggtggagc ccccggcctt
     2101 cgcggcgcag gatgatggcc agttctcccc cgtccggatg aggcgcgagg ccgtgcttga
     2161 gggcattttc caccaggggc tggaggagga agggcggagc cagcacctcg tccagggccg
     2221 ggtcccagtc ccagcgcacc cgcaggcggg tgcccaggcg cagcccctcc accgacagga
     2281 agcgctgcac gagcgcccgc tcctcgccca gaggcgccgc agcgcggtcc ccgtgccgca
     2341 gcagggcccg gtacagctcc gacagatcaa ggatggcctg ttccgcggcc accggatcct
     2401 ggcgcaccag ttccgccagg ccgttcaggg aattgaacag cacgtggggg ctcagctgcc
     2461 cccggagcag cacccactgg gcctcttcca gccgccgctc ggccgtggcc ttctcctctt
     2521 ccgtgatcac ggcgaaggag atgatgcccc cgatgatggt catcatgggc gctcccacca
     2581 tgaggttgac caggag
//
LOCUS       DASUDT010000092         2189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1683397, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000092 DASUDT010000000
VERSION     DASUDT010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1683397"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VFV26_01960"
     CDS             complement(<1..456)
                     /locus_tag="VFV26_01960"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HEX4844951.1"
                     /translation="MSDQPSSLYGNEPEAPRPPAPGLVDQIVGVFTAPVELFQRLNKA
                     PSWGWALGVLLVASLAVVVIWGLKVDVDEMLRPMLERNPQIQSAQIDMAIEIQKKFIL
                     PFGVLGALFGTPAIMALLGLFYWLMGRALPEGEAPSYPQALSAAVVPGLV"
     gene            674..1885
                     /gene="rocD"
                     /locus_tag="VFV26_01965"
     CDS             674..1885
                     /gene="rocD"
                     /locus_tag="VFV26_01965"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HEX4844952.1"
                     /translation="MATPAAKSEALIAQENQFGAHNYHPLDVVCTKGEGVFLTDVDGK
                     KYMDFLAAYSAVNQGHNHPKIGEAMIAQIKTLALTSRAFRNDQFPPLLEKLCKLTGFD
                     KALLMNSGAEAVETALKAMRKWGYDKKGIEYGKAEIIVADGNFHGRTISIVGFSTDPD
                     STSKFGPFTPGFVIVPYGDLEAVKQAITPNTCAIFMEPIQGEGGVVIPPEGFLKGLRE
                     VATANNCLLVLDEIQSGLGRTGKLFAFEHEGIRPDGITIGKALSGGYYPVSAFLASDE
                     VMDVFTPGIHGSTYGGNPLACAVASAALDVLVDENLVERTAELGEYFAKRLKGMKSDK
                     VELVRVRGLWAGVQLKESAGKARPYCYQLKDRGMLCKDTHEQIIRLAPPLVITKEQID
                     WAVDQLEAVLA"
     gene            complement(1946..>2189)
                     /locus_tag="VFV26_01970"
     CDS             complement(1946..>2189)
                     /locus_tag="VFV26_01970"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4844953.1"
                     /translation="LMDCQMPVMDGFEATRAIRARERGLMAPRTPILAITANALSGDA
                     ERCFQAGMDAYLAKPYTLKALRDMLTMWLEGGSKPE"
BASE COUNT          392 a          768 c          701 g          328 t
ORIGIN      
        1 caccaggccg ggcacgacgg cggcgctgag ggcctggggg tagctgggcg cttcaccctc
       61 ggggagggcc ctgcccatca gccagtagaa gagacccagc agggccatga tcgctggcgt
      121 accgaacagg gcgccgagca cgccgaaggg caggatgaac ttcttctgta tctcgatggc
      181 catgtcgatc tgggcggact ggatctgcgg attccgctcc agcatgggcc gcagcatctc
      241 gtccacatcc accttgaggc cccagatgac caccacagcc aggctggcga cgagcaggac
      301 ccccagggcc cagccccagc tgggcgcctt gttcaggcgc tggaagagtt ccacgggggc
      361 cgtgaacacc cccacgatct gatccaccag gcccggggcg gggggccgcg gcgcttcggg
      421 ttcgttgccg tacagggaag aaggctggtc gctcatggga gtctccggag gcatcaccgt
      481 actggataga agatgccatt gtcccacttc ctccgcccag cggcgggaaa ccaccgcccg
      541 gcggggcggt aattccgggg atggggcatg acacttcgtc aaggaagcct tgagaaccct
      601 gacaaccagg cccgccgggc ctaaactggc cctttcccgt ctggcaccct tccatcccct
      661 tccggagatc cccatggcca cccccgccgc caagtccgaa gccctgatcg cgcaggagaa
      721 ccagttcggc gcccacaact accacccgct ggacgtggtc tgcaccaagg gcgagggtgt
      781 cttcctcacc gatgtggacg gcaagaagta catggacttc ctcgccgcat actccgccgt
      841 gaaccagggc cacaaccacc ccaagatcgg cgaggccatg atcgcccaga tcaagacgct
      901 ggccctcacc agccgggcct tccgcaacga ccagttcccc ccgctgctcg agaagctctg
      961 caagctgacg ggcttcgaca aggccctgct catgaacagc ggcgccgagg ccgtggagac
     1021 cgccctcaag gccatgcgca agtggggcta cgacaagaag ggcatcgagt acggcaaggc
     1081 cgagatcatc gtggcggacg gcaatttcca cggccgcacc atctccatcg tgggcttcag
     1141 caccgatccc gacagcacca gcaagttcgg ccccttcacc ccgggtttcg tgatcgtgcc
     1201 ctacggcgac ctggaggccg tgaagcaggc catcaccccg aacacctgcg ccatcttcat
     1261 ggagcccatc cagggcgagg gcggcgtggt catcccgccc gagggcttcc tcaagggcct
     1321 gcgcgaggtc gccacggcca acaactgcct gctggtgctg gacgagatcc agtccggtct
     1381 gggccgcacg ggcaagctgt tcgccttcga gcacgagggc atccgccccg acggcatcac
     1441 catcggcaag gccctcagcg gcggctacta ccccgtgagc gccttcctcg ccagcgacga
     1501 ggtcatggac gtcttcaccc ccggcatcca cggcagcacc tacggcggca accccctggc
     1561 ctgcgccgtg gcctccgcgg ccctagacgt gctggtggac gagaatctgg tggagcgtac
     1621 ggccgagctg ggcgagtact tcgccaagcg cctgaagggc atgaagtccg acaaggtgga
     1681 gctggtgcgc gtgcgcggcc tctgggccgg cgtgcagctg aaggagagcg ccgggaaggc
     1741 ccgcccctac tgctaccagc tcaaggaccg cggcatgctc tgcaaggaca cccacgagca
     1801 gatcatccgc ctggcgcccc ccctcgtcat caccaaggag cagatcgact gggccgtgga
     1861 tcagctcgag gccgtgctgg cctagacctc cgacacatgt cccaggggcc tccggcggat
     1921 acctaccccg gaggcccttg gggcatcact cgggtttcga tccgccttcg agccacatcg
     1981 tgagcatgtc ccgcagcgcc ttgagggtgt agggcttggc gaggtaggcg tccatgccgg
     2041 cctggaagca gcgctcggcg tccccgctca gggcgttggc cgtgatggcg aggatcggcg
     2101 tgcgtggcgc catcaggccc cgctcccggg cgcggatggc gcgggtcgct tcgaagccgt
     2161 ccatcaccgg catctggcag tccatgagc
//
LOCUS       DASUDT010000093         2120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1242058, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000093 DASUDT010000000
VERSION     DASUDT010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242058"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VFV26_01975"
     CDS             <1..527
                     /locus_tag="VFV26_01975"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX4844954.1"
                     /translation="FGPAETSRTLSALKGAVPCLLRVPTQDPEGLSEAAALGAEGLIV
                     PHVDTAEQAGAAVRAVEGRALVVVQAESEAALANIGAIARVPGVDAVFVGPYDLSDSL
                     GISGQFSHPVFLDAVASIVRACREAAMPLGIFRMSAAEMRPHEAAGFTLLATGLDGTL
                     LEAGARSLLAELRG"
     gene            complement(679..>2120)
                     /locus_tag="VFV26_01980"
     CDS             complement(679..>2120)
                     /locus_tag="VFV26_01980"
                     /inference="COORDINATES: protein motif:HMM:NF020071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent helicase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4844955.1"
                     /translation="ARPGFDTPELQRSDLAEPLLSLHGMGIAEPGALDWFEAPPESAI
                     AAAEALLTRLGALAEGALTPVGRRMAELPLHPRLARLAIAGDELGVPQLALRAAALLE
                     TGNLSARQGLDRAPIKTGHGADSDLLLRLDQFEEAEAAGFGAGACRAAGLDAAAAHRA
                     RRAVQSLARLLPSPVEPADAETRLLKALLLAYPDRVGQLSANGTCAFAGGGGAKLDAA
                     SRVRRPGLILALEAEAVKQGTGAQTLIRVASRCEADWLLDAFPDRLEDVDEVVFNASA
                     GRVERRTEIRYDGLVIDASRGPADPADPRVGGLLAQALRERPLDEVPARFLARLSFLR
                     KHRPDLDLPEDLLEPLLAGACAGRTTLREVQDVDWPAALRQAFPAETLRLLDAWAPET
                     IQLPKGRPTKVHYEDDPPWIASRLQDFWGLKKTPAVAGGAVPLVLHLLAPNMRALQVT
                     TDLAGFWQRVYKELRPALSRRYPKHHWPE"
BASE COUNT          277 a          761 c          781 g          301 t
ORIGIN      
        1 gcttcggccc cgccgagact tcaaggaccc tctcagccct gaagggcgcc gtgccctgcc
       61 tgctgcgggt tcccacccag gatcccgagg ggctttccga ggcggccgcc ctcggcgcag
      121 agggcctcat cgtgccccac gtggatacgg cggagcaggc cggggccgcc gtgcgggcgg
      181 tcgagggccg ggccctggtg gtggtccagg ccgaatcgga ggcggccctc gccaacatcg
      241 gggccatcgc ccgcgttccc ggcgtggatg ccgtgttcgt gggcccctac gacctgagcg
      301 atagccttgg catctccggg cagttcagtc atccggtctt cctggacgcc gtggcttcca
      361 tcgtccgcgc ctgccgggag gccgccatgc ccctgggcat cttccgcatg tccgccgcgg
      421 agatgcggcc ccacgaagcc gctggcttca ccctcctggc caccgggctg gacggcaccc
      481 tgctggaggc cggggcgcgg agcctgctgg ccgagttgcg gggctgaaga aacgtctgga
      541 gaccggagtc tggagtctgg aggtactgct ccctgatgcg gcccttctgg ccgcgtctgt
      601 gtttgccttt ggggcgttcc ggcacatagc ggccgacggg ttcatcggga ccagactcca
      661 gactccagac tgattccctc actccggcca gtggtgcttg ggataccgcc gcgacagggc
      721 cgggcgcagc tccttgtaga cccgctgcca gaagccggcg aggtcggtgg tgacttgcag
      781 cgcccgcatg ttcggcgcca gcaggtgcag caccaggggc acggctccgc ccgccacggc
      841 gggggtcttc ttcagtcccc agaaatcctg gagccgcgag gcgatccagg ggggatcgtc
      901 ctcgtagtgg accttggtgg gccgtccctt gggcagctgg atggtttcgg gcgcccaggc
      961 atccagcagg cgcagggtct cggccgggaa ggcctgccgc agggccgcgg gccagtccac
     1021 gtcctgcacc tcgcgcaggg tggtgcggcc cgcgcaggcg cccgccagca gcggctccag
     1081 caggtcctcg ggcagatcca ggtccggccg gtgcttccgc aggaaggaga ggcgggccag
     1141 gaaccgcgcc ggaacctcat ccagaggtcg ttccctcaag gcctgcgcga gcaggcctcc
     1201 tacccgcggg tccgcaggat ccgcgggccc ccggctcgca tcgatcacca agccgtcgta
     1261 gcggatttcg gtgcgccgct ccacccgtcc cgccgaggcg ttgaacacca cctcatccac
     1321 gtcctccagg cgatcgggga aggcgtccag cagccagtcc gcctcgcacc gggaggccac
     1381 gcggatgagg gtctgggcgc ccgtgccctg cttcacggcc tcggcttcca gggccaggat
     1441 caggcccggc cgccgcacgc gggaggcggc atccagcttc gccccgccac ccccggcgaa
     1501 ggcgcaggtg ccgttggcgg acaactgacc cacgcgatcc gggtaggcca gaagcagggc
     1561 tttcagcagg cgcgtttcgg cgtccgcggg ttccacgggc gagggcagca gccgcgccag
     1621 ggattgcacg gcccgcctgg cgcggtgcgc ggcagcggca tccagcccgg cggcccggca
     1681 ggcgcccgcg ccgaaacccg cggcctcggc ctcctcgaac tggtccaggc gcaacagcag
     1741 gtccgagtcc gcgccgtggc ctgtcttgat gggtgctcgg tccagcccct ggcgggccga
     1801 caggttgccg gtctccagga gggccgcggc gcggagggcc agctggggca cgccgagctc
     1861 gtcgccggcg atggcgagcc gggccaggcg ggggtgcagg ggcagctccg ccatgcgccg
     1921 gcccacgggg gtgagggcgc cctccgccag ggcgcccagg cgtgtgagca gggcctcggc
     1981 ggccgcgatg gccgattccg gcggcgcctc gaaccagtcc agggcgccgg gctcggcgat
     2041 gcccatgccg tgaagggaga gcagcggttc ggccagatcc gaccgctgga gttctggcgt
     2101 atcgaaccct gggcgggcct
//
LOCUS       DASUDT010000094         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_314306, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000094 DASUDT010000000
VERSION     DASUDT010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314306"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VFV26_01985"
     CDS             <1..199
                     /locus_tag="VFV26_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844956.1"
                     /translation="FAGFGAIVEVPPGEGGFLGPRLRVGWAFHPNWALSLEAEHLERP
                     FTDGLGVRRRSSIGLVLTTRF"
     gene            complement(473..1333)
                     /locus_tag="VFV26_01990"
     CDS             complement(473..1333)
                     /locus_tag="VFV26_01990"
                     /inference="COORDINATES: protein motif:HMM:NF014881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HEX4844957.1"
                     /translation="MPATLSGRLDCQETARHYLELVRSNVKKLGFSPGLGVILGSDDP
                     GSVTYQRWLMKDCEDLGINAADLRVSNGMQLVKLLARLNQDEKTHGVFIFYPLRYPEI
                     KDDEVMDLVDPGKDIEGLHAINIGFLNKYRKRMDDGTQHRCMTPCTARAVVKTLKRGF
                     GDAWLAGRTVLVINDSLRIGRPLTAMVANLKGTPILCHANTNKEHLEGFIRMADVIVS
                     AVPAPNYRIHTDWIKDGALCFDLSGEGNFDYEALERRGIPYTDTTKNSVGKVTRAMAL
                     LNLTYAAGVE"
     gene            1403..1864
                     /locus_tag="VFV26_01995"
     CDS             1403..1864
                     /locus_tag="VFV26_01995"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844958.1"
                     /translation="MRSSKSASTEIQARLRAAYPDARCALDHLDPYQLVVATILSAQC
                     TDARVNLTTPALFARFPDAASLAEARQEDVEALIKSTGFFRNKAKNLIGLGQALMARH
                     GGQVPSDPAELGALPGVGQKTTNVVLANAFGVPALAVDTHIFRVARRLGLS"
BASE COUNT          290 a          713 c          660 g          367 t
ORIGIN      
        1 cttcgcgggc ttcggcgcca tcgtggaagt gccgcccggc gagggcggct tcctcggccc
       61 ccgcctccgc gtgggctggg ccttccatcc gaactgggcc ttgagcctgg aggccgagca
      121 cctggaacgc cccttcacgg acggcctggg cgtccgccgc cgcagcagca tcggcctggt
      181 gctcaccacc cgcttctgat agcccgcttc ccgtttccgg ccgcgccggt gttctatacc
      241 gagtggcgtt caaagataga gattcaccac ggagacaccg aggccacaga ggaggcacga
      301 aggcctcggt gatcctccgt catgggcagg ccgaaggccg cttccggcca agccggaagc
      361 cacggtaggc ggcgggcccg gatccttgtg ggacatcctg gctcgccgtc taccgtgtgc
      421 ccatgctctg tgcctccgtg gtggattctt ttacgattga acgcgaaggg tattattcca
      481 cgcctgccgc gtaggtcagg ttcagcaggg ccatggcccg cgtgaccttg cccacgctgt
      541 tcttggtggt gtcggtgtag gggatgcccc ggcgctccag ggcctcgtag tcgaagttgc
      601 cctcgccgct gaggtcgaag cagagggcgc cgtccttgat ccagtcggtg tggatgcggt
      661 agttgggggc gggcacggcg ctgacgatga catcggccat gcggatgaag ccctccaggt
      721 gctccttgtt cgtgttcgcg tggcagagga tgggggtgcc cttgaggttg gccaccatgg
      781 ccgtgagggg ccggccgatg cggaggctgt cgttgatgac gagcacggtc ctgcccgcca
      841 gccaggcgtc gccgaagccc cgcttgaggg tcttcacgac ggcccgcgcc gtgcacgggg
      901 tcatgcagcg gtgctgggtg ccgtcatcca tgcgcttccg gtacttgttc aggaacccga
      961 tgttgatggc gtgcaggccc tcgatgtcct tgcccggatc caccaggtcc atcacctcgt
     1021 cgtccttgat ctcgggatag cgcagggggt agaagatgaa cacgccgtgg gtcttctcgt
     1081 cctggttgag gcgggcgagg agcttcacca gctgcatgcc gttgctgacg cggagatccg
     1141 ccgcattgat gcccaggtcc tcgcagtcct tcatgagcca gcgctggtag gtgacgctgc
     1201 ccggatcgtc gctgcccagg atgacgccca gccccggcga gaagcccagc ttcttcacgt
     1261 tcgagcgcac cagctccagg tagtggcggg cggtttcctg gcagtccagt cttcccgaga
     1321 gcgtggcggg catggggcac ctcgccttcc agtctatcga atcctccgca ttcatcggca
     1381 tcccgccccg tatcctggtc ccatgcgctc ttccaagtcc gcttccaccg agatccaggc
     1441 ccgcctccgc gccgcctatc ccgatgcccg ctgcgccctg gaccacctgg atccctacca
     1501 gctggtggtg gccaccatcc tcagcgccca gtgcacagac gcgcgggtga acctcaccac
     1561 gccggccctc ttcgcccggt tcccggatgc cgccagcctg gcggaggccc gccaggagga
     1621 cgttgaggcc ctcatcaaat ccacgggctt cttccgcaac aaggccaaga acctcatcgg
     1681 cctgggccag gccctgatgg cgcggcacgg cggccaggtg ccctcggatc cggcggaact
     1741 gggcgccctg ccgggcgtgg ggcaaaagac caccaacgtc gtgctggcca atgccttcgg
     1801 cgtgccagcc ctggccgtgg acacccacat cttccgcgtg gcccggcgcc tgggcctgtc
     1861 gtaggccgcc acccccgaga aggtggaggc cgacctctgc cgcatcttcc cgcgcgagga
     1921 ctggatcaag ctgcaccacc agctcatctt ccacggccgc cgcgtctgcg acgcccgccg
     1981 cccggactgc gccgcctgcc ccctgctgga cctgtgtccc acgggactcg
//
LOCUS       DASUDT010000095         2708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1153655, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000095 DASUDT010000000
VERSION     DASUDT010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153655"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VFV26_02000"
     CDS             complement(<1..739)
                     /locus_tag="VFV26_02000"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4844959.1"
                     /translation="MQDRMQSESRLLGLLYGAVFGTLFPLFHFAARSFARRERGHEIA
                     DQIANAFMELRPRYLEAVLGNTAQVLGLRPSHPRVDRVARDMVRQHARAWVDFFFYGQ
                     RPPEEALAQFASLEGLEHMDAAMAGGRGVILLTAHAGNYELGGLLLKARNLKIHAVYK
                     PDRFEAVERLREGLRAQGGVVGIPVDGIGFSTLPLVKLLREGRLVGMQGDRDFSLNGV
                     PMPFFGREVPFPRGPWELAAMTGAPIVT"
     gene            complement(744..2387)
                     /locus_tag="VFV26_02005"
     CDS             complement(744..2387)
                     /locus_tag="VFV26_02005"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4844960.1"
                     /translation="MVLLLAGNAILPLFYGKHLLAIVLDYLGVFTLAFWAAGLAWRRA
                     RREGPAAFGLLGLGAALGGLHYAPTLLRLPYAALAGPAISILGLLALGAGFLRWPQQI
                     RMARDRMRTSLDGLAIALAVFTAAWVAMGPMEGVGSLSRGRLIIYLAQISAVLGLLTL
                     WLLQETRLMLPEQARAKALVKGALVALLAHSALAALLRVTGHYHGGYLGHGVEVLHQV
                     ASLLLALAALSPASTVEPPLPRKAPSPLRALLPSLVSLGVLFLAAFHLLRPHTDPQRA
                     LMGLSLGLLSVLMLRHGLLILDLERLSHDLEIRVEERTRKLEDHHREAMSGLRMRIMA
                     GLAAGLAHDLNNLLGIIRLRVDLLDEDCTPEQKKHLSVLAETSERAVAMTQRILASSR
                     MQEAHPSAFDFTAWMKERSGLFQALLGPRQRLDLQVAPGLHAFADPHSLDQILQNLVS
                     NARDAMGPEGLLLLRAEARAETLRVEVRDDGPGIPAGHQAQMFEPFFTTKAQGTGLGL
                     ATVRNLVLQNRGSIQVESEPGRGTAFIIDLPVPERLLLA"
BASE COUNT          427 a          898 c         1007 g          376 t
ORIGIN      
        1 tggtgacgat gggggcgccg gtcatggcgg ccagttccca gggccctctg gggaagggga
       61 cttcccggcc gaagaagggc atgggcacgc cgttcaggct gaagtcccgg tccccctgca
      121 tgcccaccag gcgcccctcc cgcaggagct tcaccagggg cagggtggag aacccgatgc
      181 catccacggg gatgcccacc acgccgccct gggcgcgcag gccctcgcgc aggcgctcca
      241 cggcctcgaa gcggtcgggt ttgtagaccg cgtggatctt caggttccgg gccttcagca
      301 gcagtccgcc cagctcgtag ttgccggcgt gggccgtgag caggatgacg ccccggcccc
      361 cggccatggc cgcgtccatg tgctccagcc cctcgaggct cgcgaactgc gccagggctt
      421 cttccggggg ccgctgtccg tagaagaaga agtccaccca ggcacgggca tgctggcgca
      481 ccatgtcccg cgccacgcgg tccacccgcg gatgcgaggg gcgcaatccc agcacctgcg
      541 cggtgttgcc gaggaccgcc tccaggtacc tgggccggag ttccatgaag gcgttggcga
      601 tctggtcggc gatctcgtgg ccccgctccc gccgggcgaa ggaccgggcg gcgaagtgga
      661 acagggggaa cagggtgccg aagacggccc cgtagaggag gccgaggagc ctcgattcgc
      721 tttgcatgcg gtcctgcatg gcctcaggct agcagcagcc gctcgggcac cggcaggtcg
      781 atgatgaagg ccgttccgcg ccccggctca ctctccacct ggatgctgcc gcggttctgg
      841 agcacgaggt tgcggaccgt ggcaaggccg agccccgtgc cctgggcctt ggtggtgaag
      901 aagggctcga acatctgggc ctggtgcccg gcggggatgc ctgggccgtc atcgcggacc
      961 tccacccgga gcgtttcggc gcgggcctct gcccgcagga ggagcaggcc ttcgggaccc
     1021 atggcatccc gggcattgga cacgaggttc tggaggatct ggtccaggga gtggggatcg
     1081 gcaaaggcgt ggagccccgg cgcgacctgg agatccaggc gctgacgggg ccccagcagc
     1141 gcctggaaca agccgctgcg ctccttcatc caggcggtga aatcaaaggc cgaggggtgg
     1201 gcctcctgca tgcggctgga ggcgaggatg cgctgggtca tggccacggc ccgttcggac
     1261 gtctccgcca gcacgctcag atgcttcttc tgctccggcg tgcagtcctc gtccagcagg
     1321 tccacgcgga gccggatgat gccgagcagg ttgttcaggt cgtgggccag ccccgccgcc
     1381 agcccggcca tgatgcgcat ccgcaagccg ctcatggcct cgcggtggtg gtcctccagc
     1441 ttccgggtgc gctcctccac ccggatctcc agatcgtggg acaggcgttc gaggtccagg
     1501 atcagcaggc cgtgccggag cataaggacg ctcaacaggc ccaggctgag gcccatgagg
     1561 gcccgctgag ggtcggtgtg gggacggagg aggtggaagg ccgccaggaa cagcaccccc
     1621 agggatacca gggaggggag gagggcccgc aggggcgagg gcgccttccg gggcagcggc
     1681 ggttccaccg tcgatgccgg gctgagggcc gccagggcca gcagcaggct ggccacctgg
     1741 tggagcacct cgaccccatg gcccaagtag cccccgtggt agtggcccgt gacccgcagc
     1801 agggccgcca aggcgctgtg ggccaggagg gcgaccaggg cccccttcac caaggccttg
     1861 gcccgcgcct gctcgggcag catcaggcgg gtctcctgga ggagccacag ggtcaggagg
     1921 cccaggacgg cgctgatctg cgccaggtag atgatcagtc tgccccggga caggctgccc
     1981 acgccctcca tggggcccat ggccacccat gcggcggtga agacggccag ggcgatggcc
     2041 agcccgtcga ggctggtgcg catgcggtcc cgggccatgc ggatctgctg gggccaccgc
     2101 aggaacccgg cacccagcgc caggagcccc aggatcgaga tggccgggcc cgcgagggcc
     2161 gcgtagggca gacggagcag cgtgggggcg tagtgcaggc cgcccagagc ggcgccgagg
     2221 cccaggaggc cgaaggcggc gggaccttcg cggcgggccc gccgccaggc cagtccggcc
     2281 gcccagaagg ccagggtgaa tacgcccagg tagtccagga cgatcgccag gaggtgcttg
     2341 ccgtagaaga ggggcaggat ggcgtttccc gccagcagca ggaccaaccc gccgaccaca
     2401 gcccggtgcg atggccggag ggcggccggg ggcgcgggcg agaccggagg ttctggcatc
     2461 tgttgagtgt ccacggactc atcgaagggt gcaatccttg cctgttacga cgtggccagc
     2521 gtaacaaaag gtacgcccct gcttcagcgc cacacgttct ggttcggatt gcggtcttcc
     2581 atttccagcc acagccgctg caggctctgg agacgctcgg ggtagtggag ccccagcctc
     2641 tccagggtgg cctcgtcatc gggatcgaag gcggtgggat cttccagcac ttcggcgggg
     2701 aactcggg
//
LOCUS       DASUDT010000096         5522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1153744, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000096 DASUDT010000000
VERSION     DASUDT010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5522
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153744"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1681
                     /locus_tag="VFV26_02010"
     CDS             <1..1681
                     /locus_tag="VFV26_02010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4844961.1"
                     /translation="PADVTVLKHSNVSVTDLQTGQAADPQELLEGALKSNMETARLYS
                     ELKQAKDSLEKKNEELSQLYTHLDQANQDNQKTRKYLEGLIQNMGEAVVSFAPDGKIL
                     TWNAAAERMFGYTRPEIIGRSMSELTPDHLQDELARIIQQVGHGQVVRDARTVRIRKG
                     GETFSVSITYAPVRGADDRVLALSAMVRDTSQTQALEDRLVHSQKHEALGRLVPALFH
                     EASNRLTPVLLEARLIAEAAMEPHLAEQATRLVKAVDAVQSLLHPLQTVLNPPPARRM
                     ETQLNQVIQEAAALVEVNAQHVGVSVELNLEPTLPLAGLDPALMVQALTNLLLNGIQT
                     SAAGPTKRLRVATRLADGQLQVVVQDSGPALSEARQAEVFDPAAAATPDALGLPVADI
                     IARQHGGRLTVRSQEGLGNAFLLEVPYQGVPAAVNGARAGLQGRRALVVDDEEFLLEC
                     LVDALHAWGLDVTAASRGDEAVQRLEEGAFDLIVSDIRMPGLSGVELFDWLKAQRPAM
                     TKRILYTTGDSFDAMTRSFLDANQVPYLGKPFDLKQLKQSLEHLLETRNEA"
     gene            1739..2863
                     /locus_tag="VFV26_02015"
     CDS             1739..2863
                     /locus_tag="VFV26_02015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844962.1"
                     /translation="MHQSWVLAVIVGSGLLAQAPPPAPPPPVPAEAQVPHPEPKPEPK
                     PDPKADLPPVPKPEAEAKPFDQLRPSQRKLAYTLHRAALSAHELGYYRSHPKALEVRE
                     ALEALMAVKADLPEKARTALPAVEAYLAKLRANQGLYDLDGKKILLEGSWKDLQTAAR
                     AAAKAGAKGLEPRLLKLKGLLFDAKVDAAAPSWAAPEPPAKGKKAKAVKDPKAPEGFA
                     AQKAITALWVKRAQAWIENTPQEVEVKGEKKVRRVPDPAQTKALNALLIWLENEDLDL
                     LRDPGFAWLDLRRLGATPGAALMAHANDIATSKAPDGPVGELALLPTYEPVVADSKFS
                     KGEEKRPVLSDVKQGAPAADLAAQMATFQKLGRSREFDAK"
     gene            complement(2910..3629)
                     /locus_tag="VFV26_02020"
     CDS             complement(2910..3629)
                     /locus_tag="VFV26_02020"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4844963.1"
                     /translation="MPEPKILLVEDELSLAEGIKLNLELEGLACTWIPRGDQALKAIL
                     TETFDLVVLDVMLPGMDGFTICEKVREAKNFTPILFLTAKNTDDDRMHGFETGADDYL
                     GKPFQVKELLLRVRAILRREAWYKSREISSRQAFGPHWVDFDNYCGEGPGGPFQLGVK
                     ESMILKLLMERPGQVVSRTDILDKVWGEDAYPTSRTVDNFIVRIRRVMEQDPHHPRWV
                     HTIRSVGYQFDPEGKQRKGED"
     gene            3683..4633
                     /locus_tag="VFV26_02025"
     CDS             3683..4633
                     /locus_tag="VFV26_02025"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4844964.1"
                     /translation="MDPYLSIVIPIYNEEENIPVLWERLSRVMAEHFTDPAKPWEIVL
                     TDDGSRDRSLALLVDIAKAEPRVKIVEFNRNYGQHSAIFGAFAEVKGQIIVTLDADLQ
                     NPPEEIPKLVAKVEEGYDVVGGWRQGRQANDSFFRTMPSKIVNAVTRKTTGVKLHDYG
                     CMLRAYSRDVVDAMLLCKERSSFIPALANSFARRITEVPVAHAERAAGESKYGLWKLI
                     NLQFDLLTSFSLLPLQALSVFGVITAAFGFLLFLGLVVYRFLHPEGTAQGVFTLFAIL
                     FFFVGCQFIAFGLLGEYIGRIYQEVRDRPRYMVKKVHQGK"
     gene            complement(4757..4945)
                     /gene="yacG"
                     /locus_tag="VFV26_02030"
     CDS             complement(4757..4945)
                     /gene="yacG"
                     /locus_tag="VFV26_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEX4844965.1"
                     /translation="MTLRPCPLCRTPAAWEGNPFKPFCSERCRIRDLGAWSSESYRVP
                     EKPQEEDGEGWTGEISEG"
     gene            5111..>5522
                     /locus_tag="VFV26_02035"
     CDS             5111..>5522
                     /locus_tag="VFV26_02035"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX4844966.1"
                     /translation="MGKIIGIDLGTTNSCVAILDGSSTRVIENAEGARTTPSIIAYME
                     DGEVLVGAPAKRQAVTNPKNTLYAVKRLIGRKFTEKEVQKDIDLMPYTITAADNGDAW
                     VEVRGKKMAPPQVSAEVLRKMKKTAEDFLGEEVTE"
BASE COUNT         1006 a         1861 c         1808 g          847 t
ORIGIN      
        1 cccggcggat gtgacggtgc tgaagcacag caacgtgagc gtcaccgacc tgcagacggg
       61 ccaggcggcg gacccgcagg agctgctgga aggcgcgctc aagtcgaaca tggagaccgc
      121 gcggctctac tcggagctga agcaggccaa ggactcgctg gaaaagaaga acgaggagtt
      181 gagccagctg tacacccacc tggaccaggc gaaccaggac aaccagaaga cccgcaagta
      241 cctggaaggc ctcatccaga acatgggcga ggccgtggtt tccttcgcgc cggacggcaa
      301 gatcctcacc tggaacgccg cggcggagcg catgttcggg tacacccggc ccgagatcat
      361 cggacgcagc atgtccgagc tcacacccga ccacctccag gatgagctgg cgcggatcat
      421 ccagcaggtg ggccacggcc aggtggtgcg ggatgcccgc accgtccgga tccgcaaggg
      481 tggcgagacc ttctccgtca gcatcaccta tgcgccggtc cgcggggccg atgaccgcgt
      541 cctcgccctt tccgccatgg tccgcgacac gagccagacc caggccctgg aggaccggct
      601 ggtccattcc cagaagcacg aggccctggg gcgcctggtg ccggccctct tccacgaagc
      661 ctcgaatcgg ctcacccccg tgctgctgga ggcccgcctc atcgctgaag cggccatgga
      721 gccgcacctg gccgagcagg ccacccgcct ggtgaaggcg gtggatgccg tgcagagcct
      781 gctccacccc ctgcagaccg tgttgaaccc gcctccggcc cggcgcatgg agacccagct
      841 caaccaggtc atccaggaag ccgcggccct ggtggaggtc aacgcccagc acgtgggggt
      901 ttcggtggag ctgaacctgg agcccaccct tcccttggcc gggcttgacc cggccctgat
      961 ggtgcaagcc ctgaccaacc ttctgctgaa cggcatccag accagcgccg ccggtcccac
     1021 gaagcgcctt cgggtggcca cgcgcctcgc ggacggccag cttcaggtgg tcgtgcagga
     1081 ttccggtccc gccctgtcgg aagcccggca ggcggaggtt ttcgatcccg ccgccgcggc
     1141 cacgcccgat gccctggggc tgcctgtggc cgatatcatc gcgcggcagc acggggggcg
     1201 gctgacggtc cggagccagg agggactggg gaatgccttc ctgctggagg tgccgtacca
     1261 gggggttccc gcggccgtca atggggccag ggcggggctc cagggccgcc gcgccctggt
     1321 ggtggacgac gaggagttcc tgctcgaatg cctggtggac gccctccatg cctggggctt
     1381 ggatgtcacc gccgccagcc gcggagacga agcggtccag cgcctggagg aaggggcctt
     1441 cgatctgatc gtctccgaca tccgcatgcc gggcctttcg ggggtggagc tcttcgactg
     1501 gctgaaggcg cagcggcctg ccatgacgaa acgcatcctc tacaccacgg gggattcctt
     1561 cgacgccatg acccgaagct tcctggacgc gaaccaggtg ccctaccttg gtaagccttt
     1621 cgatctaaaa caattgaagc aaagtctgga gcacctgcta gagactcgga acgaggcgtg
     1681 agggcctatc ctgcggcata ctgagggcct ccaccgcaca tccaacgagg agcctccgat
     1741 gcatcaaagc tgggtcttgg cagtcatcgt ggggtcgggc ctcctggccc aggcgccccc
     1801 tcccgcaccg ccgcccccgg ttccggcgga agcccaggtt ccccatcccg aacccaagcc
     1861 cgaacccaag cccgatccga aggcggacct tccaccggtg ccgaaacccg aggccgaggc
     1921 caagcccttc gaccagctcc gacccagcca gcgcaaactg gcctacacgc tgcaccgggc
     1981 cgccctctcg gcccacgagc tgggctacta ccggagccac cccaaggctc tcgaggttcg
     2041 cgaggccctg gaagccctga tggccgtgaa ggcggacctg cccgagaagg cccggacggc
     2101 ccttccggcg gtggaggcct acctggcgaa actgagggcc aaccagggcc tctacgacct
     2161 ggacgggaag aagatcctcc tggaaggaag ttggaaggac cttcagaccg cggcccgggc
     2221 cgcggccaag gcgggcgcca agggtctgga accccgcctc ctgaagctca agggcctgct
     2281 cttcgacgcc aaggtggatg ccgccgcgcc cagctgggcg gcgcccgagc cccccgccaa
     2341 ggggaagaag gccaaggctg tgaaggaccc gaaggctccc gagggcttcg cggcccagaa
     2401 ggccatcacc gccctctggg tgaagcgcgc ccaggcctgg atcgagaaca cgccccagga
     2461 agtggaggtc aagggcgaga agaaggtgcg ccgcgtgccc gatcccgccc agaccaaggc
     2521 cctgaacgcc ctgctgatct ggctggagaa cgaggacctg gacctgctgc gggatcccgg
     2581 attcgcctgg ctggacctgc gccgcctggg cgccacaccc ggcgccgcgc tgatggccca
     2641 cgccaatgac atcgccacct ccaaggcgcc cgacggcccg gtgggggaac tggccctgct
     2701 gcccacctat gagcccgtgg tcgccgacag caagttcagc aagggcgagg agaagcgccc
     2761 ggtgctgagc gacgtcaagc agggggcccc cgcggcggac ctcgccgccc agatggccac
     2821 cttccagaag ctgggccgca gccgcgagtt cgacgccaag tagctttcca gcccaaaaaa
     2881 gcggggcgcg atcgcgcccc gctttttcgt taatcctcgc ccttccgctg cttcccttcc
     2941 gggtcgaact ggtagcccac gctccggatg gtgtggaccc agcggggatg gtggggatcc
     3001 tgctccatta cgcggcggat gcggacgatg aagttgtcca cggtgcggct ggtgggatag
     3061 gcgtcctcgc cccagacctt gtccaggatg tccgtgcggc tcaccacctg gccgggccgc
     3121 tccatgagca gcttgaggat catgctttcc ttgaccccca gctggaaggg gccgcccggg
     3181 ccctcgccgc agtagttgtc gaagtccacc cagtgggggc cgaaggcctg gcggctgctg
     3241 atctcccggc tcttgtacca ggcctcgcgc cggaggatgg cccgcacccg cagcagcagc
     3301 tccttcacct ggaagggctt gccgaggtag tcgtcggcgc cggtctcgaa gccgtgcatg
     3361 cggtcgtcat cggtgttctt ggccgtgagg aagaggatgg gggtgaagtt cttcgcctcg
     3421 cgcaccttct cgcagatggt gaagccatcc atgccgggca gcatcacgtc gaggacgacg
     3481 aggtcgaagg tttccgtgag gatggccttc agggcctgat ctccgcgggg gatccaggtg
     3541 caggcgagac cctccagctc gaggttgagc ttgatgccct cggcgaggct cagctcgtct
     3601 tcgaccagca ggatcttggg ttcgggcatg ggaaactcca gggcaggctt gatcgtacta
     3661 gaatgaaggc tccggagcgc ccatggaccc gtatctcagc atcgtcatcc ccatctacaa
     3721 cgaggaggag aacatccccg tgctgtggga gcggctgtcc agggtgatgg cggagcactt
     3781 cacggatccg gcgaagccct gggagatcgt gctcacggat gacggcagcc gggaccgcag
     3841 cctggccctg ctggtggaca tcgccaaggc cgagccccgg gtgaagatcg tggagttcaa
     3901 ccggaactat ggccagcaca gcgccatctt cggggccttc gccgaggtga agggccagat
     3961 catcgtcacc ctggacgccg acctccagaa cccccccgag gagatcccca agctcgtggc
     4021 caaggtggag gagggctacg acgtggtggg cggctggcgc caggggcgcc aggccaacga
     4081 cagcttcttc cggaccatgc ccagcaagat cgtcaacgcc gtcacccgga agaccacggg
     4141 tgtgaagctc cacgactacg gctgcatgct gcgggcctac agtcgcgacg tggtggacgc
     4201 catgctgctc tgcaaggagc gctcgagctt catcccggcg ctcgccaaca gcttcgccag
     4261 gcggatcacc gaggtgcccg tggcccacgc ggagcgcgcc gcgggggaaa gcaagtacgg
     4321 cctctggaag ctcatcaacc tccagttcga cctcctcacc agcttcagtc tgctgcccct
     4381 ccaggccctc agcgtgttcg gcgtcatcac ggcggccttc ggcttcctgc tcttcctggg
     4441 cctggtggtc taccgcttcc tgcatcccga gggcacggcc cagggtgtgt tcaccctgtt
     4501 cgccatcctg ttcttcttcg tgggttgcca gttcatcgcc ttcggcctgc tgggcgagta
     4561 catcggccgc atctaccagg aagtgcggga ccgcccccgg tacatggtca agaaggtcca
     4621 ccagggaaag tgatcgaagg attcaccacg gagccacgga gaacaaggga ggaaccacgg
     4681 agaaggagat gggctcgcct ttttctctcc gtgtgctttc ctcagtgccc tccgtgcctc
     4741 tgtggtgatt ctcgggtcac ccctccgaaa tctccccggt ccagccttcg ccgtcctctt
     4801 cctggggctt ctcggggacg cggtagcttt cgctggacca ggcgccgagg tcccggatcc
     4861 ggcagcgctc cgagcaaaag ggcttgaagg ggttcccctc ccaggcggcg ggggtccggc
     4921 agagggggca ggggcgaagc gtcatgtggt cagcatatcc ctgattgaat agccaacgat
     4981 caagaagaaa atatgagcac aatattgaag atcgtattga caaggggtgc tcgtccttta
     5041 ttctcatggg agcagggtgg gcctagcccg gcctgctacc cccaccagca cccccagaag
     5101 gagcgacacc atgggcaaga tcatcggcat tgacctcggc accaccaaca gctgcgtggc
     5161 catcctggac ggcagcagca cgcgcgtgat cgaaaacgcc gaaggcgcac gcaccacccc
     5221 gtccatcatt gcctacatgg aagacggcga ggtgctggtg ggcgcgcccg ccaagcgcca
     5281 ggccgtcacc aaccccaaga acacgctgta cgcggtgaag cgcctgatcg gccgcaagtt
     5341 caccgagaag gaagtgcaga aggacatcga cctgatgccc tacaccatca ccgccgccga
     5401 caacggcgac gcctgggtgg aagtgcgcgg caagaagatg gccccgccac aggtcagcgc
     5461 cgaagtgctg cgcaagatga agaagaccgc cgaggatttc ctgggcgagg aagtgaccga
     5521 gg
//
LOCUS       DASUDT010000097         2981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1264211, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000097 DASUDT010000000
VERSION     DASUDT010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264211"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VFV26_02040"
     CDS             <1..325
                     /locus_tag="VFV26_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844967.1"
                     /translation="GDYIGATHLGRDLGGYGNASPANGKLGQYGRTPAVNNVDFHIDW
                     AYKIGKKYKLIPSVDVFNLFNTRYATSVRQQATDGNGVADPRYGVANAWQVGRRYRFG
                     VKFQF"
     gene            complement(403..960)
                     /locus_tag="VFV26_02045"
     CDS             complement(403..960)
                     /locus_tag="VFV26_02045"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX4844968.1"
                     /translation="MKLYTRTGDDGSSGLFGGERVSKSHLRLVAYGTLDELNSVMGLL
                     CLHVTAPCATRETLQRIQHDLFVLGAILATPASRQELLGARMSTPTWALGDMEADIDR
                     LTALAPPMTAFVLPGGTAASAHAHLARTVCRRAEREVVTLAQEESLNPAVLAYLNRLS
                     DWLFALARAENATAGVADVLWLPKD"
     gene            complement(1133..1774)
                     /gene="pyrE"
                     /locus_tag="VFV26_02050"
     CDS             complement(1133..1774)
                     /gene="pyrE"
                     /locus_tag="VFV26_02050"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX4844969.1"
                     /translation="MPLSPRDLVASLLDAGAVRLQPMDPFTWASGLKSPIYCDNRQLL
                     GFPEARGLIVEALVARTASFAPTLIAGAATAGVPWAAMVADRMGLPMAYVRPTPKNHG
                     MGRQVEGPMAKGHRAVLIEDLISTGMSSLKCADALKAEGAEVPAVLALFSYGLPQAEK
                     AFASARITFDVLGSFEVLSAEAEHRGILDASGLAALKDWRSDTVAWSRARGGA"
     gene            complement(1984..2931)
                     /locus_tag="VFV26_02055"
     CDS             complement(1984..2931)
                     /locus_tag="VFV26_02055"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HEX4844970.1"
                     /translation="MSAAPKFLPPVVDSVLDLVGNTPLLRLTRFAPEFQLFSKLEYLN
                     PGGSVKDRIGVGMIRAAEALGQIQPGISTIIEPTAGNTGVGLAIAAKALGYRCILCVP
                     TKYSREKMMLMKALGAELVLIPKDKGMVGAIEKCKELAASIPHAFVPQQFDNPSNPDS
                     HYATTGPEIWTQMEGRVDAVVLGAGSGGTFTGIARYLKEKNPKIQAVVVQPVGSVYCG
                     APLKEWVVEGVGNGFIPASLDLSIADQIMDVADADSLATARELIATEGCLVGASSGAN
                     AWAAREVARALPAGARIVTLFPDGAERYMSKQPVADLEL"
BASE COUNT          528 a          967 c          983 g          503 t
ORIGIN      
        1 cggcgactac atcggcgcca cccacctcgg ccgcgatctg ggcggttacg gcaacgcctc
       61 ccccgccaac ggcaagctgg gccagtacgg ccggaccccc gcggtcaaca acgtggactt
      121 ccacatcgac tgggcctaca agatcggcaa gaagtacaag ctgattccca gtgtggatgt
      181 cttcaacctg ttcaacaccc gctatgccac cagcgtgcgt cagcaggcca ccgacgggaa
      241 cggtgtcgcc gatccccgct acggcgtcgc caatgcctgg caggtcggcc gccgctaccg
      301 tttcggcgtg aagttccagt tctagccgga acccacgacc gcaaaagaaa cgggcccgaa
      361 agggcccgtt tcttttggat gaaatcaatg cgcccgggtc cttcaatcct taggcaacca
      421 cagaacatca gccacgcccg cggtggcgtt ttcggcgcgg gcgagggcga agagccagtc
      481 gctgaggcgg ttcaggtagg ccagcaccgc gggattcagg gattcctcct gggcgagggt
      541 caccacctcg cgctcggcgc ggcggcagac cgtgcgggcc aggtgggcat gggcggaggc
      601 ggcggtcccc ccgggcagca cgaaggcggt catgggcggg gccagggccg tgaggcggtc
      661 gatgtcggcc tccatgtccc ccagggccca ggtgggcgtg ctcatgcggg cccccagcag
      721 ctcctgccgg gaggcgggcg tggcgaggat ggcccccagc acgaagaggt cgtgctggat
      781 ccgctggagc gtctcgcggg tggcacacgg cgccgtgacg tgcaggcaga gcaggcccat
      841 gacgctgttc agctcgtcca gggtgccgta ggccaccagc cgcaggtgcg acttgctcac
      901 ccgctcaccc ccgaagagcc ccgaggagcc atcgtcgccc gtgcgcgtgt agagcttcat
      961 gatcggacct cgaaaaaaca gggacaggat taacaggatt ttaaaggatt aacaggattc
     1021 aaaaatcaaa taatgtggac aaaaccaaag cgtttttcct tcattaatcc tgttaatcca
     1081 tcttttcatc ctgttaatcc tgtccatgtc tttcgccggt atgggtcggc gcctacgccc
     1141 cgccgcgggc gcggctccag gccacggtat cggatcgcca gtccttcagg gcagccaatc
     1201 cggaggcgtc cagaattccg cgatgctccg cttccgcgga aagcacctcg aaggagccaa
     1261 gcacgtcgaa agtgatgcgg gccgaggcga aggccttctc cgcctggggc aggccgtagc
     1321 tgaagagggc cagcacggcg ggcacttcgg cgccctcggc cttcagggca tctgcgcact
     1381 tcaggctgga catgcccgtg gagatcaggt cctcgatgag cacggcgcgg tggcccttgg
     1441 ccatggggcc ttccacctgg cggcccatgc cgtggttctt gggcgtgggc cgcacgtagg
     1501 ccatggggag gcccatgcgg tccgccacca tggccgccca gggcacgccc gcggtggcag
     1561 cgcctgcgat gagggtgggc gcgaagctgg ccgtccgggc caccagcgcc tccacgatca
     1621 ggccccgggc ctccggaaag cccagcagct gccggttgtc gcagtagatc ggggacttca
     1681 gcccgctggc ccaggtgaag ggatccatgg gctggaggcg cacggcaccg gcatccagca
     1741 ggctggctac gaggtcgcgg ggagacaggg gcatcacaga ctccaaagca ttgttaacca
     1801 ccgatgagca cagctgaaca cggctggaag tggcctaaaa agggaacaac catcccaccc
     1861 gtgacttggg tttgtgcggc atctaatccg tgtgcatccg tgttcatccg tggctcattt
     1921 ccttttcatc tcgggccttt cttcatgcca atgcaggagt gggcaggagt ggacaggagt
     1981 gaatcacagc tccaggtcgg ccacgggctg cttggacatg tagcgctcgg cgccatcggg
     2041 gaagagcgtc acgatgcggg ctcccgcagg cagagccctg gccacttccc gggcggccca
     2101 ggcgttggcg ccgctggagg cgccgaccag acagccctcg gtggcgatga gttcccgggc
     2161 ggtggccaga ctgtccgcgt cggccacgtc catgatctga tcggcgatgg agagatccag
     2221 actggcggga atgaagccgt tgcccacgcc ctccaccacc cactccttca ggggcgcacc
     2281 gcagtagacc gagcccacgg gctgcaccac cacggcctgg atcttcggat tcttctcctt
     2341 caggtagcgc gcgatgcccg tgaaggtgcc gccgctgccc gcgcccaaca ccacggcatc
     2401 cacgcggccc tccatctgcg tccagatctc gggacccgtg gtggcgtagt ggctgtcggg
     2461 attgctgggg ttgtcgaact gctggggcac gaaggcgtgg gggatgctgg cggccagttc
     2521 cttgcacttc tcgatggcgc ccaccatgcc cttgtccttg gggatgagca ccagctccgc
     2581 gcccagggcc ttcatgagca tcatcttctc gcggctgtat ttcgtgggca cacagaggat
     2641 gcagcggtag ccgagcgcct tggccgcgat ggccaggccc acccccgtgt tgccggccgt
     2701 gggctcgatg atggtgctga tcccgggctg gatctggccc agggcctcgg cggcgcggat
     2761 catgcccacg ccgatgcggt ccttcacgct gccaccggga ttcaggtact ccagtttcga
     2821 gaagagctgg aactccggcg cgaagcgcgt gaggcgaagc aggggcgtgt tccccaccag
     2881 gtccaggacg gaatcgacga caggaggaag gaacttgggt gcggcagaca taggttctcc
     2941 gaacccctaa ttctactttg tcggcttcct ggctcccacc a
//
LOCUS       DASUDT010000098         4521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1220382, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000098 DASUDT010000000
VERSION     DASUDT010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4521
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220382"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..1550
                     /locus_tag="VFV26_02060"
     CDS             72..1550
                     /locus_tag="VFV26_02060"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HEX4844971.1"
                     /translation="MAQKGVQIITVEPGSLAEEAGIRPGDTLLEIHGEAVLDQLNYQF
                     LITREDEAVLLVQRPDGSTFEAAVENGGEGIGVDLAQDEVKVCKQNCVFCFVHQMPKG
                     FRKSLYLKDEDVRLSFLYGHFTTLSSSDDAELDRIVRERLSPIHVSVHATDPVARVKV
                     VGNPREGDILRKIDRLLDGGIDVHTQAVVAPGLNDGAIWQRTVDDLWARRKDGRGSVL
                     SLSCVPVGLTGHREHLPSVQDVDTAFARDWVAQWTPEVRTYAKANEGEPWLLLADEWF
                     TRAGIEVPGRAFYSRSWAQLENGVGLVRRFLEHSRRFIKSPRARGFTGRRVLLLTGAS
                     FAPVLSRVAAELNRQVGSHLRVAAAKNISFGESVTVAGLLCGEDLKYAAHADRDAKGG
                     RADWVDAVVVPSSSLRTHTGPTDQYTLRGVVVREEGTFLDDLTLPQLAGDLGVPTVPS
                     GANLSHLLDHLEAADRGAFRGGALQSAFHTAGLNLPQGAYNP"
     gene            1709..2539
                     /locus_tag="VFV26_02065"
     CDS             1709..2539
                     /locus_tag="VFV26_02065"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4844972.1"
                     /translation="MAGSALCFGLMAILARKLTQPAVGFTAGHLAVLRFVVGAALSLA
                     AFGLIPGLYRPCNYRLLVTRGLSGGAVVVLYFYALAHIPAGEAGLLYNVFPVIAVAMS
                     LAIFRERPTVHLWLAILAASLGVVLVLRQGHLGFGFGRGELAALAAAVFAATSANAIR
                     AARHTENAATIFFFFCLAGLPVVLPFALSPWPGGLAAWGLALLMSLLAFGGQLLMSEA
                     YGALSVSEAAVWLQLLPIVQYLLAVPLLGERATAFGLAGVLITVAGVAYGTVMGHRKA
                     "
     gene            complement(2582..3076)
                     /locus_tag="VFV26_02070"
     CDS             complement(2582..3076)
                     /locus_tag="VFV26_02070"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX4844973.1"
                     /translation="MDAGSPKGKQKSDINVTPLIDIVLVLLIVFIVMVPGLDKATKVV
                     VPQVQVTSTPPKPDPNNIMIQLDQDGSLTLQQDKIDADGIKAKLPEAVMLQPLNYRKV
                     FLKVDEDVKFQAMVDVLDAIRVASDAAKKKSLEQLDKFQGQDGGDVKVAVSLKRRITA
                     APVS"
     gene            complement(3076..3540)
                     /locus_tag="VFV26_02075"
     CDS             complement(3076..3540)
                     /locus_tag="VFV26_02075"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX4844974.1"
                     /translation="MKADINVTPLVDIVLVLLIIFIVITPAVNSSVKLPLAKHSPKAE
                     KNKDEKYLTLLFQSKRNDKYEVIGPGAVLIDDKDAKDERFFINEEAQRQKLEDYINRN
                     VSQLSQKVVFVKADADLPFKYINELFQVCRKGGADEASIVTSEDKDKKEGGN"
     gene            complement(3628..4356)
                     /locus_tag="VFV26_02080"
     CDS             complement(3628..4356)
                     /locus_tag="VFV26_02080"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX4844975.1"
                     /translation="MNLLSSPLMLGLAEGGHDSFSAAEIWRAASLANKGIIVILFVLL
                     AYQIYVTVERFVTYAQSNQASDKFLKLFMDTLRRGDFEAAKRAATTHNKSHIALVLKH
                     GLDIFQYEKQLKAMNPNHDAIQPVERAIERGTAEVVELLKKGMSGLATIGALAPFIGL
                     LGTVIGIINVFSQLKAKGAGDINALAGAIGEALATTALGLVVAIPAVWIYNLLTNKQD
                     VVVTNINNAASQMIDEFIRRESQG"
BASE COUNT          683 a         1411 c         1568 g          859 t
ORIGIN      
        1 tctatagcct ttcggatgag acaatctatc tccggattcc cgccagggaa tccggagcat
       61 ggagcgtccc cttggcccag aaaggcgtcc agatcatcac ggtggaaccc ggcagcctgg
      121 ccgaggaggc cgggatccgg cccggcgaca ccctgctgga gatccacggc gaggcggtgc
      181 tggaccagct gaactaccag ttcctcatca cccgcgagga cgaggcggtg ctgctcgtgc
      241 agcggccgga tggcagcacc ttcgaggccg ccgtggagaa cggtggcgaa ggcatcggcg
      301 tggacctggc ccaggacgag gtgaaggtct gcaagcagaa ctgcgtgttc tgtttcgtgc
      361 accagatgcc caagggcttc cggaaatccc tctacctcaa ggacgaggac gtgcgcctgt
      421 ccttcctcta cggccacttc accacgctct ccagcagcga cgacgccgag ctggaccgca
      481 tcgtgcgcga gcggctcagc cccatccatg tctcagtcca cgccacggat cccgtggccc
      541 gggtgaaggt ggtgggcaat ccccgcgaag gcgacatcct ccgcaagatc gaccggcttc
      601 tggatggggg cattgatgtc cacacccagg cggtggtggc gccggggctc aacgacggcg
      661 ccatctggca gcgcacggtg gacgacctct gggcgcggcg gaaggatggc cggggcagcg
      721 tcctgagcct gtcctgcgtg cccgtggggc tcacgggcca ccgcgagcac ctgccttctg
      781 tacaggacgt ggacacggcc tttgcccggg actgggtggc ccagtggacg ccggaggtgc
      841 ggacgtacgc caaggccaat gagggggaac cctggctgct gctggcggac gaatggttca
      901 cccgggcggg gatcgaggtg ccggggcggg ccttctattc gcggtcctgg gcccagctgg
      961 agaacggcgt gggcctggtg cgccggttcc tggagcacag ccgccgcttc atcaagtcgc
     1021 cacgggccag gggattcacg ggtcgtcgag tcctcctctt gaccggcgcg agtttcgcgc
     1081 cggtactcag ccgcgtcgcg gctgagctta accgccaggt gggcagccac ctgcgggtgg
     1141 cggcggcgaa gaacatcagc ttcggagaga gcgtgaccgt cgcgggcctg ctctgcggcg
     1201 aggacctcaa gtacgcggcc catgcggatc gtgacgccaa gggcggccgg gcggattggg
     1261 tggacgcggt ggtggtgccc tcctccagcc tccgcaccca cactggcccc acagaccagt
     1321 acaccctgag gggcgtggtc gtccgcgaag aaggcacctt cctggatgac ctgaccctgc
     1381 cccagctggc gggagacctg ggcgtgccca cggtgcccag cggcgccaac ctgtcccacc
     1441 tgctggatca cctggaggcc gcggaccgcg gcgccttccg gggcggggcc ctgcagtccg
     1501 ccttccacac cgccggcctg aacctgcccc agggcgcgta caacccctga ggaaaggcaa
     1561 ggactcacca ccaaggcacc aaggcaccaa gaaaagagaa gggcagttct tggtgtcttg
     1621 gtgtcttggt ggtgatcatt ttcttttcga gcgagtgccc atgtccgttt ctgcgtctgc
     1681 ccgtcgccgc acaatggctc gtgtggagtt ggcgggttct gcgctctgct tcgggctcat
     1741 ggccatcctg gcccggaagc tcacgcagcc ggccgtggga ttcacggcgg gccacctggc
     1801 ggtgctgcgc ttcgtggtgg gcgcggcgct gagcctcgcg gccttcgggt tgatcccggg
     1861 cctctaccgg ccctgcaact accgcctgct ggtgacgcgg gggctctccg ggggggccgt
     1921 ggtggtgctc tacttctacg ccctggccca catcccggcg ggggaggcgg gccttctcta
     1981 caacgtgttc ccggtgatcg ccgtggccat gtccctggcc atcttcaggg aacggcccac
     2041 ggtccacctc tggctggcca tcctggcggc ttccctcggc gtggtgctgg tgctccgcca
     2101 gggccacctc ggcttcggct tcggccgcgg cgagctggcg gccctggccg ccgcggtctt
     2161 cgcggccacc agcgccaatg ccatccgggc cgcgcggcac acggaaaacg ccgccaccat
     2221 cttcttcttt ttctgcctgg cgggcctgcc ggtggtgctg cccttcgccc tgtctccctg
     2281 gcccgggggc ctcgcggcct gggggctcgc cctcctcatg agcctgctgg ccttcggggg
     2341 gcagctcctg atgtccgagg cctacggcgc gctgtccgtg tccgaggcgg cggtctggct
     2401 gcagctgctc cccatcgtgc agtacctcct ggcggtgccc ctgctggggg agcgggccac
     2461 ggccttcggg ctggcggggg ttctcatcac cgtggcgggc gtggcctacg gcacggtgat
     2521 ggggcaccgg aaggcatgaa aaagggcccc ggaaggggcc cttttcgtgg atcgcggaag
     2581 cctagctgac gggcgccgcg gtgatgcgcc gcttgaggga gacggccact ttcacatcgc
     2641 cgccgtcctg gccctggaac ttgtcgagct gttcgaggga cttcttcttc gcggcgtccg
     2701 aggcgacgcg gatggcgtcg aggacgtcca ccatggcctg gaacttcacg tcctcgtcca
     2761 ccttcaggaa gaccttccgg tagttgaggg gctgcagcat gacggcttcg ggcagcttgg
     2821 ccttgatgcc atcggcgtcg atcttgtcct gctggagggt cagcgagccg tcctggtcca
     2881 gctggatcat gatgttgttc ggatcaggct tgggcggagt gctggtcacc tgaacctggg
     2941 gcaccacgac cttggtggcc ttgtcgaggc cgggcaccat cacgatgaag acgatgagga
     3001 gcaccagcac gatgtcgatg agcggggtga cgttgatatc ggatttctgt ttgcccttgg
     3061 ggctgccggc atccatcagt tacccccttc cttcttgtcc ttgtcttcgc tggtgacgat
     3121 ggacgcctcg tcggcgccac ccttccggca gacctggaaa agctcattga tgtacttgaa
     3181 gggaaggtcc gcatcggcct tcacgaacac caccttctgg ctcagctgcg agacattgcg
     3241 gttgatgtag tcctcaagct tctggcgctg ggcttcttcg ttgatgaaga agcgctcgtc
     3301 cttggcgtcc ttgtcgtcga tgagcacggc gccgggtccg atcacttcgt acttgtcatt
     3361 gcgcttggac tggaagagca gggtgaggta cttctcatcc ttgttcttct cggccttcgg
     3421 gctgtgcttg gccagcggca gcttcacgct gctgttcacc gcgggcgtga tcacgatgaa
     3481 gatgatcagc agcaccagca cgatgtccac aagcggcgtg acgttgatgt cggccttcat
     3541 tccacccttg gaaccacctg catccatggt gtgttctcct cagaaaatcg cccgggagct
     3601 cgcgcccccg ggcgggggtg gaaagtctta gccctggctc tcgcggcgga tgaactcgtc
     3661 gatcatctgg gaggccgcgt tgttgatgtt ggtgacgacc acatcctgct tgttggtcag
     3721 caggttgtag atccacacag ccgggatggc gacgacgagg ccgagcgcgg tggtggccag
     3781 ggcctcaccg atggcgccgg cgagggcgtt gatgtcgcca gcgcccttgg ccttcagctg
     3841 ggagaacacg ttgatgatgc cgatcacggt gccgagcagg ccgatgaagg gggccagggc
     3901 gccgatggtg gccaggccgc tcatgccctt cttgaggagc tcgacgacct cggcggtgcc
     3961 gcgctcgatg gcccgctcca cgggctggat ggcatcatgg ttggggttca tggccttgag
     4021 ctgcttctcg tactggaaga tgtccaggcc gtgcttgagc accagggcga tgtggctctt
     4081 gttgtgggtg gtggcggcgc gcttggcggc ctcgaagtcg ccgcggcgca gggtgtccat
     4141 gaagagcttg aggaacttgt cggaagcctg gttgctctgg gcgtaggtga cgaagcgctc
     4201 gacggtcacg tagatctggt aggccagcag gacgaacagg atgacgatga tgcccttgtt
     4261 ggccagggag gccgcgcgcc agatttcggc cgcggagaag ctgtcgtggc cgccttcggc
     4321 gagaccgagc atcagggggg aggaaagcag gttcatgagg tttccttatg gagtgtaaag
     4381 aaaagagatg gacgcgtgga taagggcccg gctacttgag ccggaagggc atcgtcagct
     4441 tgaagcgcgc gtactgcggg gcgccgttca ggagcgccgg ttcgaatttc caatgcatgg
     4501 cataggcttc agccgtgggg c
//
LOCUS       DASUDT010000099         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1286675, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000099 DASUDT010000000
VERSION     DASUDT010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286675"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..933
                     /locus_tag="VFV26_02085"
     CDS             <1..933
                     /locus_tag="VFV26_02085"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX4844976.1"
                     /translation="VQRQTLKRMGTLLLEGGKVTPSDLQDALFSQATAILHRTFRWVE
                     GDYRFDSFLPSDLDREHFVPIPVDTVLMEAARIQDEWPEVERRLPGLDTPLAKSATAQ
                     ALHLDIDRDVSTVLDGKGRMQHGSSGLTHEQEMVLSYFDSPQSAKDVIQISRYEELDT
                     CKAVADLLEAGLLQPISGVAVKVSRPWVDGHLERAAAEWQPSPFFWPLVALGLALPLA
                     LYVPHHRGSMNLGLASLQPVDILVVPEGPTRVRQEWALRMAAPKDGGMALAQRLGRPL
                     EGKNLIPDLTHLPDPMIPVPAAAAASEPPQQPKP"
     gene            943..1542
                     /locus_tag="VFV26_02090"
     CDS             943..1542
                     /locus_tag="VFV26_02090"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF003296.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEX4844977.1"
                     /translation="MFVHQRQGSLEVICGPMFSGKSEELIRRIKRAIIAKQKVQVFKP
                     ALDDRYDASAIASHSQRKHDAIPVKDSVELARHLDPETQVVALDEVQFMDEGLIPIIE
                     DLANHGVRVIAGGLDQDSNGEPFGIMPILLAKAEYVTKLQAICMVCGALAGRTQRMVH
                     TGGQVLVGAAEAYEARCRHCHETPHATGNRLLEEPTQGG"
     gene            1710..2900
                     /locus_tag="VFV26_02095"
     CDS             1710..2900
                     /locus_tag="VFV26_02095"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4844978.1"
                     /translation="MAGAYATFTHITDYMGFEGLLTDEERMIRESARKFVNAEVLPII
                     EKHAQDQTFPRHLIPKMGELGFYGPSLPEEYGCMGVSNVAYGLLMYELERGDSGLRSF
                     ASVQGSLVMWPIYAYGSEEQRKHWLPKLATGEKIGCFGLTEPDFGSNPGGMLTKAVRE
                     PGGKWRINGTKMWITNGTVADVAVVWAQTEEGIRGFLVEKGTPGFSAPEMKGKWSLRA
                     STTSELVLEDVIVDEATSLLPNVKGLKGPLGCLTQARYGIAWGALGAADACYQCALDY
                     AKTRIQFDKPIASYQLQQEKLAWMVTELTKGQLLVHQLGRLKDAKTYTTAQVSMAKMN
                     NVNIALEVCRKARTILGANGILDEYPVMRHMANLESVYTYEGTHDMHTLIIGQEVTGI
                     PAYR"
BASE COUNT          528 a         1038 c          911 g          455 t
ORIGIN      
        1 gtgcagcgcc agaccctcaa gcgcatgggg accctgttgc tcgagggcgg caaggtgacg
       61 ccctcggacc tgcaggatgc gctcttcagc caggccacgg ccatcctcca ccgcaccttc
      121 cgctgggtgg aaggggacta ccgtttcgat tccttccttc cctcggatct ggaccgggaa
      181 catttcgtcc ccatcccagt ggacaccgta ttgatggaag ccgcccgcat ccaggacgag
      241 tggcctgaag tggagcgccg cctgccgggc ctcgacacgc ccctcgccaa atcggccacc
      301 gcccaggccc tgcacctgga catcgatcgc gatgtgtcga ccgtgctgga cgggaagggg
      361 aggatgcagc acgggtcatc agggctcacc cacgagcagg agatggtgct gtcgtacttt
      421 gacagtccgc agagcgccaa ggacgtcatc cagatcagcc ggtacgagga actggacacc
      481 tgcaaggccg tcgccgacct cctggaggca ggcctgctgc agcccatctc gggcgtggcg
      541 gtcaaggtgt cccgtccctg ggtggatggc cacctggagc gggccgccgc cgaatggcag
      601 cccagtccgt tcttctggcc actggtggcc cttggactcg cccttcccct ggcgctgtac
      661 gtgccccatc atcgcggatc catgaaccta ggattggcca gccttcagcc cgtggacatc
      721 ctggtggtgc ccgaggggcc gacccgggtc cgccaggagt gggcgctgcg catggccgcc
      781 ccgaaggacg gcggcatggc cctggcccag cggctcggaa gaccgctgga ggggaagaac
      841 ctgattccgg acctgaccca tcttcccgac cccatgatcc cggttccagc tgcggccgcg
      901 gcttcagagc cgccccagca gcccaagcca taaggatttc cgatgttcgt gcaccagcgc
      961 cagggttccc tggaggtgat ctgcggcccc atgttctccg gcaaatccga ggagctcatc
     1021 cggcgcatca agcgggccat catcgccaag cagaaggtcc aggtcttcaa gcccgccctg
     1081 gacgaccgct acgatgcctc cgccatcgcc agccacagcc agcgcaagca cgacgccatt
     1141 cccgtgaagg acagcgtgga actggcccgg cacctggatc ccgaaaccca ggtggtggcc
     1201 ctggacgagg tccagttcat ggacgagggg ctcatcccca tcatcgagga cctcgccaac
     1261 catggtgtgc gcgtcatcgc cggcggcctg gaccaggatt ccaacggcga gcccttcggg
     1321 atcatgccca tcctgctggc caaggccgaa tacgtcacca agctccaggc catctgcatg
     1381 gtctgcggcg ccctcgcggg gcgcacccag cgcatggtgc acaccggcgg ccaggtgctg
     1441 gtgggcgcgg cggaagccta cgaggcccgc tgccgccact gccatgagac ccctcatgcc
     1501 acggggaacc ggctgctgga agagcccacc cagggtggct gatttttcca cttcgtcaag
     1561 ctgatccctg gcatgacacc catcgggcct gtggagccgg atccccccct ggccctggat
     1621 tgacccggcg gtagactggc cgcggcgcgc tgctgcagcg ccggttccac catcccgccc
     1681 gaggcttcag ggcattccag gagttcccca tggccggcgc ctacgccacc ttcacccaca
     1741 tcaccgacta catgggcttc gagggcctgc ttaccgacga ggagcggatg atccgcgaat
     1801 cggcgcgcaa gttcgtcaac gccgaagtgc tgcccatcat cgaaaagcac gcccaggacc
     1861 agaccttccc caggcacctc atccccaaga tgggcgaact gggcttctac ggcccctcgc
     1921 tgccggagga atacggctgc atgggcgtgt cgaacgtcgc ctacggcctc ctgatgtacg
     1981 aactggagcg cggcgattcg ggtctgcgtt ccttcgcttc ggtgcagggc agcctcgtca
     2041 tgtggcccat ctacgcctat ggcagcgaag agcagcggaa acactggctg cccaagctgg
     2101 ccaccggcga gaagatcggc tgcttcggcc tcacggagcc cgacttcggc tccaaccccg
     2161 gcggcatgct caccaaggcc gtacgcgagc ccggcggcaa gtggcgcatc aacggcacca
     2221 agatgtggat caccaacggc accgtggctg acgtggccgt ggtgtgggcc cagaccgagg
     2281 agggcatccg cggcttcctg gtggaaaagg gcaccccggg cttcagcgcc cccgagatga
     2341 agggcaagtg gagcctgcgc gcctccacca cctccgagct ggtgctggag gatgtcatcg
     2401 tcgacgaggc cacgtccctc ctccccaacg tgaagggcct gaaggggccc ctgggctgcc
     2461 tcacccaggc ccgctacggc atcgcctggg gcgccctggg cgccgcggac gcctgctacc
     2521 agtgcgccct ggactacgcg aagacccgca tccagttcga caagcccatc gccagctacc
     2581 agctccagca ggagaagctg gcctggatgg tcacggagct caccaagggg cagctgctgg
     2641 tgcatcagct gggccgcctg aaggacgcca agacctacac caccgcccag gtctccatgg
     2701 ccaagatgaa caacgtgaac atcgccctcg aagtctgccg gaaggcccgc accatcctgg
     2761 gcgccaacgg catcctcgac gagtaccccg tcatgcgcca catggccaac ctcgagagtg
     2821 tctacaccta cgagggcacg cacgatatgc acaccctcat catcggccag gaagtgacgg
     2881 ggattcccgc ctatcgctga ttcgggtggc agtcgtctac ccgcgaccgg gc
//
LOCUS       DASUDT010000100         9324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1573829, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000100 DASUDT010000000
VERSION     DASUDT010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9324
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573829"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..849)
                     /locus_tag="VFV26_02100"
     CDS             complement(<1..849)
                     /locus_tag="VFV26_02100"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4844979.1"
                     /translation="MSRPWIKLLDPVLTALKSAAGTSFEARLTLARALNGRARHEEAQ
                     EILDQLLAEDRSHAEAWFERLLCFHDHTGEEEGLELLGQLESLRDEHPGDGGHLRNLA
                     YLRLLLQDLDGAELALQQALARNGQDPKALELAGLVQLHRSHPSDAKAWFLKALSLNP
                     KDPRTLRLLAIAMEQLNDWGGAETQLVAALQTEECYYWGWHALGELLLKRGELSEGLR
                     CIQRARSLHVCDPASYFILAEIFSEQGHLELAQGQLHTLMLLAPPAPVLAEAQALLGE
                     LKRDMGD"
     gene            complement(878..1804)
                     /locus_tag="VFV26_02105"
     CDS             complement(878..1804)
                     /locus_tag="VFV26_02105"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX4844980.1"
                     /translation="MSTRILATSPLVGPALAELGARFPELRLAPFRSPEWNAALPGAE
                     ALVVMLSEPLTEADLDAAPKLKAIGTYSVGVNHLPVKACQARGIAVVNTPGVLTDATA
                     DIALALLMAVTRRVAEGEALVRSGQWQGWAPDQLLGPALAGKVCGILGSGPIGQAFAR
                     RAWALGMSPVFWDREGHGGGVEFGAGKAPRLPLPELLSRSAVLSLHCPLTDQTRGMLD
                     RAALEQLPQGAVIINTARGGIMDENAAMDLLESGRLGGVGLDVYEGEPRLNPRWLKAP
                     RTVLLPHLGSATVETREAMARLLCDGLASALG"
     gene            complement(1801..2538)
                     /gene="ruvA"
                     /locus_tag="VFV26_02110"
     CDS             complement(1801..2538)
                     /gene="ruvA"
                     /locus_tag="VFV26_02110"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX4844981.1"
                     /translation="MTRCRPTRSFPAGRSGTAGTRTWSRGCWIPSSATGSSGPEAGPL
                     FRYPRRMIGRLRGELIQKLPNMALVECGGVGYAAAISLSTYGLLPEAGAQVVLHTELL
                     VRENDISLLGFASPQERELYRLLVKVDGVGPKLALAALGALSLEDLVQAIRGRDVKAL
                     TRIPGVGKKTAEKMCFELSEKLGGLSGLDGLSGVPSGDPWEESLRSAMTNLGFKEDVV
                     LPVVADLRASKPPLAEAIRLALKALQR"
     gene            complement(2429..3562)
                     /locus_tag="VFV26_02115"
     CDS             complement(2429..3562)
                     /locus_tag="VFV26_02115"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HEX4844982.1"
                     /translation="MAALIYRPEYAGYDFGPEHPFTPARLGMLLDLIHSLGHPTTPIA
                     PPAATREEILTVHDEAYVAMVEALDRGEPRPEAEQFGLGTPDNPVFPGMDLAARRLVG
                     GTLHGARLLMEGAAARVLQLGGGLHHAQRDRAAGFCLYNDLAVAIRALVDHGWRVAYL
                     DIDLHHGDGVQNLFYDNDRVLTISLHETGHYLYPGTGHIHELGTGVARGLSVNVPLEP
                     FTEAASYLEAFEAVVPRALAEFSPHVLVVQAGADAHFADPLGDLALTTQTFQALHRRI
                     LELADAHTQGRVLVTLGGGYEAQVVARVWTILYLTMMDLPIPEQLPQAWLDRWRHLLG
                     PEAGRTLHDPVPAYPELSGRAERNRRNQDVVARLLDSLIRYWL"
     gene            complement(3550..4176)
                     /locus_tag="VFV26_02120"
     CDS             complement(3550..4176)
                     /locus_tag="VFV26_02120"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS and ACT domain-containing protein"
                     /protein_id="HEX4844983.1"
                     /translation="MLVKEMMRRPVTVVSSGTTIGEAFQLLQDRGFRHLPVVDQGRLV
                     GVLTDRDLRLATSNLCHTPRDAGDPVSVAMSSPPLTADPLDPVEDAARIMREHKIGCL
                     PVVDGSELVGILTGMDLLDALMLLTGVSKPSSRLEVALADRPGELARLTALLAERHVN
                     IHSILTYPSPDAVRTVLRVDSNQIRPLAEELRAAAFNVLWPIQKPWQR"
     gene            complement(4192..6630)
                     /locus_tag="VFV26_02125"
     CDS             complement(4192..6630)
                     /locus_tag="VFV26_02125"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4844984.1"
                     /translation="MFSIIPDGAGYREFVLLKDGQGILLRIATPEDVDRVEAFIRGLS
                     RQSMAMRFMGGVSSVSRAFVEDLCVENPRQQACVLAIEGEGAEQQILGLGNYVGEGGA
                     VAEVAFMIADTHQGRGIGTLILERLAGLAAGAGYLGFEAELLHENRKMDHVFRDSGFE
                     TTRAMEGGIIHVSFPLGAPEAQRERAEIRERVATANSLVPLLRPRSVAVVGASRDPAA
                     VGSTLFRHILRGGFQGAVYPVNPRAKTIEGVQAYPSLASLPEPPDLVVLAVPAAKVSA
                     LARRAMDKGARGLLVLTAGFAETGPEGARRQERLVRLARSRGARLVGPNCLGLLNTHA
                     AVQLNASLAAAMPPRGRVGFFSHSAALGVVILQYAAERGLGFSTFVSAGNRADVSGND
                     LLQYWEEDPDTDLALLYLETFGNPRRFARLARRISHRKPILCVKSARSHAGRRVAQAH
                     IAASPQNDAEVEALFHQAGVIRADTLEDLFDIALLLSHQPLPRGDRVAIVSNSGGVAT
                     ICADACESHGMRIAGPGVVDLHAMATPEHYERACQEALEHPEVDALIASFACLGDCDP
                     ALVARAIRRAAVRAEQATGIAKPTLLSLMGVSGAVPVGSPALGESGGRHRTFPSYRFP
                     ESAALALSKVVEYARFRRQPPGRFLGYADLNAGEARRRVEQHVEKLPEGAHSVFSAGQ
                     ARELLGLFGVPVTHLPEPSDRRGPRVALHLTADPDFGPIWRFHRQGVGSILRITPLTD
                     LDIADVLERMHLPPSSGLGETLGRLTQLVEELPWLCTLEAQVAIHGETGALSPLPLQP
                     DVRLTFTQVGFRKS"
     gene            6795..8471
                     /locus_tag="VFV26_02130"
     CDS             6795..8471
                     /locus_tag="VFV26_02130"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4844985.1"
                     /translation="MNGRDAFLQARNILLHHREDGALARREFHWPVLDTFNWALDHFD
                     AYAAGNERPALWIVEEGGAETKASFQDLSRRSNQVANSLRALGVKRGDGVLVMLDNVL
                     PLWEVMLACIKLGAVLVPCTLLLSQADLQDRLERGGIRHLVVDAAQTAKFEGLDASLT
                     RICVGGPAPGWLDMAGLYGGASSFEPDGPTRATDPMLLYFTSGTTAKPKLVLHTHQSY
                     PVGHLSTQYWVGLREGDIHYNISSPGWAKHAWSSFFAPWNAGACIFVFRAARFSAAAT
                     LQAIVDKGVTTLCAPPTVWRLFIQEDLAAYKVKLRGLVGAGEPLNPEVISQVEKAWGL
                     TIRDGYGQTETTAIVGNSPGQPVKAGSMGRPLPGYDVVLLDLDGKEAEEGEIALKLDP
                     RPLGLMAGYKDDPSKMAKAEAEGFYRTGDVATRDADGYFFFVGRADDVFKSSDYRISP
                     FELESFLIEHPSVAEAAVVPSPDPLKLAVPKAYIILRAGFEPGRETALALFRFIRERL
                     SPYKRIRILEFGDLPKTISGKIRRVELRKRAAEQTHSPTEFREEQFPELK"
     gene            8599..>9324
                     /locus_tag="VFV26_02135"
     CDS             8599..>9324
                     /locus_tag="VFV26_02135"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4844986.1"
                     /translation="MKYLDDVRDVRFNLLEWLDLDAVLKSGPYQEVDREQLGMVLDEA
                     LKVARGSVAACNETGDRIGARYANGKVELPEGFAEAFADLASGGWISATMNPEFGGMG
                     LPESVGTGISEFLMGANTALGLKLLLTRGAAHLIETFGSDELKAVYCEKMYTGEWTGT
                     MCLTEAGAGSDLGALTTKAVKQVDGSYLISGEKIFITSGDHELTPNIIHAVLARTPDA
                     PAGPKGLSLFVVPKVRVNADGSLG"
BASE COUNT         1448 a         3146 c         3357 g         1373 t
ORIGIN      
        1 gtcgcccatg tcgcgtttca gctcgcccag cagggcctgg gcttccgcca gcacgggggc
       61 gggcggtgcc agcagcatga gggtatgcag ctggccctgg gccagttcca ggtggccctg
      121 ttcgctgaag atctcggcga ggatgaagta gctggcgggg tcgcacacgt gcaggctgcg
      181 ggcccgctgg atgcagcgca ggccttcgga cagctcgccc cgcttcagca gcagctcgcc
      241 cagggcgtgc cagccccagt agtagcattc ctccgtctgg agcgccgcca ccagctgggt
      301 ttcggcgccg ccccagtcgt tcagctgctc catggcgatg gccagcaggc gcagggtgcg
      361 gggatctttg ggattgaggc tgagcgcctt caggaaccag gccttggcat cggaggggtg
      421 gctgcggtgg agctggacca ggcccgcgag ttcgagggcc ttgggatcct gtccgttccg
      481 ggccagggcc tgctgcaggg ccagctccgc gccgtcgaga tcctgcagga gcaggcggag
      541 gtaggcgagg ttccgcagat gtccgccatc ccccggatgc tcgtcgcgca gggattcgag
      601 ctgccccagc agttcaaggc cctcctcctc cccggtgtgg tcatggaagc agagcaggcg
      661 ctcgaaccag gcttccgcat gggagcggtc ctcggccagc agctggtcca ggatctcctg
      721 ggcctcctcg tggcgggcgc gcccgttgag ggcgcgggcc agggtgaggc gcgcttcaaa
      781 agacgttccg gcggcgctct tgagcgccgt caggacgggg tccagcagct tgatccaggg
      841 gcgtgacatg gcgtgcctcg tgagggagtc cagggtatca cccaagtgcg gaggccaggc
      901 cgtcgcaaag caggcgcgcc atggcttcgc gggtctccac cgtggcggag cccagatggg
      961 gcagcagcac ggtccggggc gccttcagcc agcgcggatt gaggcggggc tcgccttcgt
     1021 agacatccag gcccacgccg cccaggcggc ccgattcgag aaggtccatg gcggcgttct
     1081 catccatgat gccgccgcgg gcggtgttga tgatcacggc gccctggggc agctgctcca
     1141 gcgcggcgcg atccagcatt ccgcgggtct ggtccgtgag cgggcagtgg agggacagca
     1201 cggcgctgcg ggaaaggagc tccggcaggg gcaggcgggg ggccttcccg gcgccgaact
     1261 ccaccccgcc gccgtggcct tcgcggtccc agaagaccgg cgacatgccc agggcccagg
     1321 cgcgccgggc gaaggcctgg ccgatggggc cgctgccgag gatgccgcag acctttcctg
     1381 cgagggcggg gcccagcagc tggtccggcg cccagccctg ccactggccc gagcgcacca
     1441 gggcctcgcc ttccgccacg cgccgcgtca cggccatgag cagggccagg gcgatgtcgg
     1501 cggtggcatc cgtcagcacg ccgggcgtgt tcaccacggc gatgccgcgg gcctggcagg
     1561 ccttcacggg caggtggttc acgcccacgg aataggtgcc gatggccttg agcttcggcg
     1621 cagcgtcgag gtccgcttcg gtgaggggct cggaaagcat caccaccagg gcctcggccc
     1681 cgggcagggc cgcgttccac tccggcgacc ggaagggcgc gaggcgcagc tcggggaacc
     1741 tggcgccgag ttcggccagg gcgggaccga cgagggggga cgtggcaaga atgcgggtgc
     1801 tcatcgctgg agggccttca atgcaaggcg gatggcctcc gccaggggcg gcttcgaggc
     1861 gcggaggtcc gccaccaccg gcagcaccac gtcctccttg aagccaagat tggtcatggc
     1921 cgagcgcagg ctctcctccc agggatcgcc ggagggcacc ccggagaggc cgtccagccc
     1981 cgacaggccg cccagcttct ccgacagttc gaagcacatc ttctcggcgg tcttcttgcc
     2041 cacgccgggg atgcgggtga gggccttcac gtcgcgcccg cggatggcct gcaccaggtc
     2101 ctccagggac agcgccccca gggcggccag ggccagcttg gggcccacgc cgtccacctt
     2161 caccagcagc cggtacagct cccgctcctg tggagaggcg aagcccagca gcgaaatgtc
     2221 gttctcccgc accagcagtt ccgtgtgcag caccacctgc gcgcctgctt ccggcagcag
     2281 gccgtaggtg gacaggctga tggcggcggc gtagcccacg cccccgcact cgacgagcgc
     2341 catatttggc agcttctgga tgagttctcc gcgcaggcgt ccgatcattc ttcgaggata
     2401 ccggaagagc ggccctgcct ccggcccgct agagccagta gcggatgagg gaatccagca
     2461 gccgcgcgac cacgtcctgg ttccggcggt tccgctccgc ccggccggaa agctccgggt
     2521 aggccggcac cgggtcatgc agggtccggc cggcctccgg gcccaggagg tgtcgccagc
     2581 ggtccagcca ggcctgggga agctgctcgg gaatgggaag atccatcatc gtgagataga
     2641 ggatcgtcca gacgcgggcc accacctggg cttcgtagcc gccgcccagc gtgacgagca
     2701 cgcggccctg ggtgtgcgca tcggccagct cgaggatccg gcgatggagc gcctggaagg
     2761 tctgggtcgt cagggccaga tccccgaggg gatcggcgaa gtgagcgtcc gcgccggcct
     2821 gcaccaccag gacgtggggc gagaactccg ccagggcccg gggcaccacg gcctcgaagg
     2881 cctccaggta gctcgcggcc tccgtgaagg gctccagggg gacgttcacg ctcagcccgc
     2941 gcgccacgcc ggtgcccagt tcatggatgt ggccggtgcc cggatagagg tagtggccgg
     3001 tctcgtggag gctgatggtg agcacccggt cgttgtcgta gaacaggttc tggacgccat
     3061 cgccatgatg caggtcgatg tccaggtagg ccacgcgcca gccgtgatcc accagggccc
     3121 ggatggccac ggccaggtcg ttgtacaggc agaagccggc ggcccggtcc cgctgggcgt
     3181 gatgcagccc cccgcccagc tggagcacgc gggccgcggc gccctccatc aacagccgcg
     3241 cgccgtggag ggtgccgccc accagccggc gggccgcgag gtccatgccc gggaacacgg
     3301 gattgtccgg ggtgcccagc ccgaactgtt cggcctcggg tcgcggttcg ccgcggtcca
     3361 gggcctcgac catcgccacg taggcctcat cgtggacggt caggatctct tcccgggtgg
     3421 cggccggagg ggcgatgggc gtggtcggat ggcccaggga atggatcaga tccagcagca
     3481 tccccagccg cgccggcgtg aagggatgct cgggcccgaa gtcgtacccg gcgtattccg
     3541 ggcggtagat cagcgctgcc atggtttctg gatcggccac aggacgttga aggccgcggc
     3601 gcggagctct tccgccaggg ggcggatctg gttggagtcc accctcagca cggtgcggac
     3661 cgcatccggc gagggatagg tgaggatgga gtggatgttg acgtggcgtt ccgcgagaag
     3721 ggccgtgagg cgcgccagct cgccgggccg gtcggcgagg gccacttcga gccgggagga
     3781 gggcttgctc acgcccgtga gcagcatcag ggcatcgaga aggtccatgc cggtgaggat
     3841 gcccacgagt tcagagccat ccaccaccgg caggcacccg atcttgtgct cgcgcatgat
     3901 ccgggcggcg tcctcgacgg gatcgagggg gtcggccgtc aggggcgggc tgctcatggc
     3961 caccgagacg ggatccccgg cgtcgcgggg ggtatggcag aggttgctgg tggccagccg
     4021 gaggtcgcga tccgtgagga cgcccaccag gcgcccctgg tccaccaccg gcaggtggcg
     4081 gaagccccga tcctggagca gctggaaggc ttcgccgatg gtcgtcccgc tggagaccac
     4141 cgtcaccggc ctgcgcatca tctccttcac gagcatgggc cctcctcggg gtcaggattt
     4201 ccggaagccg acctgggtga aggtcaggcg cacatcgggc tgcaggggca gggggctgag
     4261 ggcgccggtc tcgccgtgga tggcgacctg ggcctccagg gtgcagagcc agggcagttc
     4321 ctccacgagc tgggtcaggc ggcccagggt ctcccccaga ccgctggagg gggggaggtg
     4381 catgcgctcg agaacgtcgg cgatgtccag gtccgtgagg ggggtgatgc gcaggatgga
     4441 tcccacgccc tggcggtgga agcgccagat ggggccgaaa tcggggtcgg cggtcaggtg
     4501 gagggccacc ctcgggcccc gccggtccga aggctccggc agatgggtga cggggacgcc
     4561 gaagagtccc agaagttccc tggcctggcc tgcggagaag accgaatgcg ccccttcggg
     4621 cagtttctcg acgtgctgct ccacacgccg ccgggcctct ccggcgttga ggtccgcgta
     4681 gcccaggaac cggcctggcg gctgccgccg gaaccgggcg tactccacga ccttggacaa
     4741 tgccagggcc gccgattcgg gaaagcggta ggacgggaag gtgcgatgcc tcccgccact
     4801 ttcgcccagg gcgggcgatc ccacgggcac ggcgccgctc acgcccatga gggagagcag
     4861 ggtgggcttg gcgatgcccg tggcctgctc ggcccgcacg gcggcccgcc ggatggcccg
     4921 ggccaccagg gccggatcgc agtcccccag gcaggcgaag gaggcgatga gcgcgtccac
     4981 ctcgggatgt tcgagggcct cctggcaggc ccgctcgtag tgctccggcg tggccatggc
     5041 gtgcagatcc accacgccgg ggccggcgat ccgcatgccg tgggactcgc aggcgtccgc
     5101 gcagatggtg gccacaccgc cggaattgct gacgatggcc acgcggtcgc cccggggaag
     5161 gggctggtgg gacagcagca gcgcgatatc gaacagatcc tccagggtgt ccgcccggat
     5221 gaccccggcc tggtggaaga gggcctccac ctccgcgtcg ttctgggggc tcgcggcgat
     5281 gtgcgcctgg gccacgcggc ggccggcgtg gctccgggcg ctcttcacgc agaggatcgg
     5341 cttgcggtgc gagatccggc gggccagccg ggcgaaacgg cgggggttcc cgaaggtctc
     5401 caggtagagc agggccagat ccgtgtccgg gtcctcctcc cagtactgga gcaggtcgtt
     5461 gcccgagaca tcggcgcggt tcccggcgga gacgaaggtg gaaaagccca gaccccgctc
     5521 ggcggcgtac tggaggatca ccacgcccag cgccgcggaa tggctgaaga atcccacccg
     5581 tccccggggg ggcatcgccg cggccaggct ggcgttcagc tggacggcgg cgtgggtgtt
     5641 caggaggccc aggcagttgg ggcccaccag gcgcgcgccc ctgctgcggg ccagccgcac
     5701 caggcgctcc tggcggcggg ccccttccgg ccccgtctcc gcgaacccgg cggtgagtac
     5761 caggaggccg cgtgcgccct tgtccatggc ccgcctggcg agggcggaca ccttggccgc
     5821 tggcaccgcc agaaccacga ggtccggcgg ctccgggagg gaggccaggg aggggtaggc
     5881 ctgcacgcct tcgatggtct tggcccgcgg attcaccggg tacacggcgc cctggaaccc
     5941 tccccggagg atgtggcgga agagggtgct ccccacggcg gcgggatccc gggaggcgcc
     6001 caccacggcc acgcttcggg gccgcaggag cggcacgagg gaattggccg tggccacgcg
     6061 ctcgcggatc tccgcccgtt cccgctgcgc ttcgggggcg cccaggggga agctcacgtg
     6121 gatgatgccg ccctccatgg cgcgggtggt ctcgaacccg gaatcccgga agacgtggtc
     6181 catcttcctg ttctcgtgca gaagctcggc ttcgaagccc aggtagccgg cccccgccgc
     6241 caggcccgcc agccgctcga ggatcagggt gccgatcccc cgcccctggt gggtgtcggc
     6301 gatcatgaag gcgacctcgg cgaccgctcc gccctcgccc acatagttgc ccagtccgag
     6361 gatctgctgc tccgccccct cgccttcgat ggccagcacg caggcctgct gccgggggtt
     6421 ctccacgcag agatcctcca cgaaggcgcg ggagacggag gagacgccgc ccatgaaccg
     6481 catcgccatg ctctgccgcg agaggccgcg gatgaaggcc tccacgcgat ccacatcctc
     6541 cggcgtggcg atccggagca ggatcccctg gccatccttc agcaggacga attcccggta
     6601 gcctgccccg tcggggatga tgctgaacac agggaacctc gcggatcttg tgccaagaaa
     6661 ccaccctagc atggcgcctc atcatgctgg tttccataga gatgcttagt tgtccatgac
     6721 gtccttttgg ttctggaccg agccccggca gcgctataga ttggccctat caatcaatca
     6781 tccagggggt tgccatgaat ggacgcgacg cgtttctcca ggcgcggaat atcctgctcc
     6841 accaccggga ggacggtgcc ctggcccgcc gggagttcca ctggcccgtc ctggacacct
     6901 tcaactgggc cctggaccac ttcgatgcct acgcggcggg caacgagcgg cccgccttgt
     6961 ggatcgtcga agagggcggc gccgaaacga aggccagctt ccaggatcta tcccggcgca
     7021 gcaaccaggt ggccaattca ttgcgggccc tgggggtgaa gcggggcgat ggcgtgctgg
     7081 tcatgctgga caacgtgctg cccctctggg aagtgatgct ggcctgcatc aagctggggg
     7141 cggtgctcgt cccctgcacc ctgctgcttt cccaggcgga tctccaggac cggctggagc
     7201 ggggcgggat ccgccacctg gtggtggacg cggcccagac ggccaagttc gaaggcctgg
     7261 acgccagcct cacccgcatc tgcgtgggcg gcccggcgcc gggctggctc gacatggcgg
     7321 ggctgtacgg cggagcctcc tcctttgagc cggatgggcc cacccgcgcc acagatccca
     7381 tgctgctcta cttcacgtcc ggcaccacgg cgaagcccaa gctggtgctg cacacccatc
     7441 agtcgtaccc cgtgggccac ctgtccacgc agtactgggt gggcctgagg gaaggggaca
     7501 tccactacaa catcagctcg cccgggtggg ccaagcacgc ctggagcagc ttcttcgccc
     7561 cctggaacgc cggggcctgc atcttcgtct tccgggccgc gcggttcagc gccgcggcca
     7621 ccctccaggc catcgtggac aagggcgtga ccaccctctg cgccccgccc accgtgtggc
     7681 gcctcttcat ccaggaggat ctcgcggcct acaaggtgaa gctccggggc ctggtgggcg
     7741 caggcgaacc cctgaatccc gaggtcatca gccaggtgga aaaggcctgg ggcctcacca
     7801 tccgcgacgg ctacggccag accgaaacca ccgctatcgt gggcaactcg ccggggcagc
     7861 cggtgaaggc cggttccatg ggccggccgc tgccgggcta cgacgtggtg ctcctggacc
     7921 tggacgggaa ggaggccgag gagggggaga tcgccctgaa gctggatccc cgccccctgg
     7981 gcctcatggc cggatacaag gacgatccct ccaagatggc gaaggccgag gcggagggtt
     8041 tctaccgcac gggcgacgtg gccacccgcg atgcggacgg ctacttcttc ttcgtgggcc
     8101 gggcggacga tgtcttcaag agttccgact accgcatcag ccccttcgag ctggaatcct
     8161 tcctcatcga gcacccctcc gtggcggaag ccgccgtggt gcccagcccg gatcccctga
     8221 agctggcagt gcccaaggcc tacatcatcc tgcgggcggg cttcgagccc ggccgcgaga
     8281 cggccctggc cctgttccgc ttcatccgcg agcggctctc gccctacaag cgcatccgga
     8341 tcctcgaatt cggcgatctc ccgaagacca tctcgggcaa gatccggcgc gtggaactgc
     8401 gcaagcgggc cgcggagcag acccattcgc ccacggaatt ccgggaagag cagtttcctg
     8461 aactgaagta gccagggccc tggagggcca tgcgcaacct accgcaggac aggtattgga
     8521 tgggcgggca tccgggcgaa gaatgaagga acgtccccga tctcctgcat ccatcgcccg
     8581 tcccttccgg aggcccccat gaagtacctc gacgatgtcc gtgatgtccg cttcaacctt
     8641 ctcgagtggc tggatctgga tgcggtgctg aagtccgggc cctaccagga ggtcgaccgc
     8701 gagcagttgg gcatggtgct ggacgaggcg ctgaaggtgg ccaggggcag cgtggccgcc
     8761 tgcaacgaga cgggggaccg catcggcgcc cgctacgcga acgggaaggt ggagctgccc
     8821 gaaggattcg ccgaagcctt tgcggatctg gcctcgggcg gctggatcag cgccaccatg
     8881 aatcccgagt tcggcggcat gggccttccg gaatccgtgg gcaccggcat cagcgagttc
     8941 ctcatggggg cgaacacggc gctgggcctc aagctgctgc tcacccgcgg cgccgcccac
     9001 ctcatcgaga ccttcgggag cgatgagctg aaggcggtgt actgcgaaaa gatgtacacg
     9061 ggggaatgga ccggcaccat gtgcctcacc gaggcgggcg cgggcagcga tctgggcgcc
     9121 ctcaccacca aggccgtgaa gcaggtcgat ggctcgtacc tcatcagcgg cgagaagatc
     9181 ttcatcacca gcggcgacca tgagctcacc ccgaacatca tccatgccgt gctggcccgc
     9241 acccccgacg cgcccgcggg cccgaagggg ctgagcctct tcgtggtgcc caaggtgcgc
     9301 gtgaacgccg atggcagcct gggt
//
LOCUS       DASUDT010000101         7254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1485585, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000101 DASUDT010000000
VERSION     DASUDT010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7254
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485585"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1082)
                     /locus_tag="VFV26_02140"
     CDS             complement(<1..1082)
                     /locus_tag="VFV26_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844987.1"
                     /translation="MVRRILILLAILGLPLALLLVRRSQRKALVPQPRGFVLGLYAGV
                     PDYDYGEELDRIAATGATCVSLQAIYRMDTGHSTEIRRHPTSSPTEESLRRTFRQAKV
                     RGLRMMFFPTINLRDEADNADWWRGNIEPSNWDLWWRNYTDFNVRLAALAQEGGVEWY
                     SLGTEMASTHPFPDQWRRLAAEVRQVFKGKLVYSVNFDSHDSFTFGDCLDVIGINTYD
                     PIAKYDAYPSAGQIRDAWWWIVYKGRTLSARFADAKGPKPVMITEVGYPSVAHAHVGP
                     WDFRTDKPLDLALQDHLLKGAFGVLRHWSDGDAVFFYLYGENLSHRPIGGPLDRTYAV
                     WGKPAQAVLEQYFREPIWEGHIPPKA"
     gene            complement(1296..2543)
                     /locus_tag="VFV26_02145"
     CDS             complement(1296..2543)
                     /locus_tag="VFV26_02145"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX4844988.1"
                     /translation="MADSGINTPASWLLLAALALLIYRSATTALLSAFHSMPSLQRRR
                     ILEEDLVQDPRLAALLERPQALGMGLAFWNQALLLALLALLWPFRIVLPGGGWSLAFL
                     VLAGLWALDLALPVLLTPGDPTRWLIRLFPLYAPIHPLLALLVDPLAHLVDRRTQDRA
                     KEAEPEDATEEAVTALLEEGEAEGILEAGDRELIRNVVTFGDTLVREVMTPRTRIAAL
                     PLEATIPQAWQAFTRTRHSRLPIFEGGIDHIRGVLLLKDLIQLPDGEHPALATLMKPP
                     RFVPESKPVMDLLREMQRTRTQLAIVVDEFGGVSGLATMEDLLEEVFGEIQDEHEAPA
                     GLVEQAPGIYLVSGQAHVEDVAQRLGLDAWEGEGFDTLAGLVLARLGCIPKPQEAVDV
                     EGARLTVLRMEGARIVQVRVERT"
     gene            complement(2557..4023)
                     /locus_tag="VFV26_02150"
     CDS             complement(2557..4023)
                     /locus_tag="VFV26_02150"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX4844989.1"
                     /translation="MSLWTDLTPSKRCDWIDQLRGWAVIVMIEVHVVNVWLQSGLRPD
                     WLNYLNGLVAPSFTMAAGYSLVISTFRTDGTLRPFWPDTARRLGFILLCAYALHAPGI
                     TLADWTVLNTPQQARELFKIDVLQCIVFSLFILQGLARLVRNPRVFTGLALAIAVFVP
                     VVAPHLWATGVADGLWLPIRGLFNGNPDRGVQALFPLFPWIAFPAFGAFLGGLYRHFR
                     VMPEEGKARWSEARFLAGLAILGALLLAWGTSAQQSWLWGGTWIQQNGTWMLHSRTGA
                     FTYSELGAIANTTLPSVAARLGWILLAGVLMGAVELVRPRWKGPNPIKAASAESLLLY
                     MLHLNLLFSVLLAPAVIGLTGWGWGSLGWTGTLLLTAAVIGLNLWAGIAWQKVRLTPD
                     LMRSLQHKAVAALGIWCVLGGWWTVRHFLQSPELAKEPYAFLNAARARKGLPPTPDGL
                     CRDPEEYFREAGRRKLHLSPEARADIARLIQARSGGTR"
     gene            complement(4033..5541)
                     /locus_tag="VFV26_02155"
     CDS             complement(4033..5541)
                     /locus_tag="VFV26_02155"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX4844990.1"
                     /translation="MSNDPRPPSQMFARKPLALLLEEAKGENRLRRVLGPVQLTALGI
                     GAIIGAGIFVATGAAAHNIAGPSLMVSYVIAGITCIFAALCYAEFAAMVPVAGSAYTY
                     AYATLGELFAWIIGWDLILEYGVSSAAVATGWSAYFQSAVSKIGIHIPKLVSESPWKY
                     DPATGHFASTGAVMNLPALIIVAIITAVLVKGIQESATFNGIMVTIKVAAVLFVIGVG
                     AFFINTTNWHPFAPFGWTGISFFGHRVAGMVDGGGAPIGTMAGAAIIFFAYIGFDSVS
                     THAEEAKNPQRDVPIGIIVSLLVCTVLYIAVVAVLTGMVKFDQLDINAPVSTAFSQKG
                     MGWAEGLIATAGVAGITSVLLVMMLSGPRVFLAMARDGLLPKATFGDVHPKFRTPWKS
                     TILVGLFVGALAGFLPIDALLHLANIGTLLAFVIVCAAVLIMRKKHPEAERPFRCPWV
                     PFVPVMGVLTCLMLMFSLPVANWWRLIAWLGLGFAIYFLYGKKHSVMRQQAS"
     gene            5652..6356
                     /locus_tag="VFV26_02160"
     CDS             5652..6356
                     /locus_tag="VFV26_02160"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX4844991.1"
                     /translation="MLPASLLSRLAAVRGSLLLCRGCLGPVAGGSEAGLCARCWAGLQ
                     PLPEGRCPRCALVHAEEACPEATAWTRGDALWDYHGGRPPLGALLLPGIKQGEGGWRR
                     ALLDRLARAPLPDWVLDVDRVAAAPSALPRRLLRGFDLGAEAARVLAGRIGRPFEPLL
                     AKAWFSGRQASRTESERRRLPRKAVSLRRGAAPGGAILLVDDVWTTGTTLLRCAQALR
                     EGGAEEVRVLTLFRAL"
     gene            complement(6565..>7254)
                     /locus_tag="VFV26_02165"
     CDS             complement(6565..>7254)
                     /locus_tag="VFV26_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX4844992.1"
                     /translation="FDEGWTVPTALDEPGILAVIEAFMDAARRAVAAGFRVIEVHAAH
                     GYLLHQFLSPLSNHRTDAYGGSFENRTRLVREVVGALRNILPEELPLLVRISATDWVE
                     GGWTLDQSVALARELKALGVDLVDCSSGGLAPRAEIPLGPGYQVPFAARIRAGAGLPT
                     GAVGLITDPEQAEAILAQESADLVLLGRELLRDPRWPLRAAQALGVEVPWPASYLRAA
                     GRAVPMRQGLG"
BASE COUNT         1131 a         2320 c         2782 g         1021 t
ORIGIN      
        1 tcggccttcg gggggatgtg cccctcccag atgggttcgc ggaagtactg ctccagcacg
       61 gcctgggcgg gcttgcccca cacggcgtag gtgcggtcca gggggccgcc gatgggccgg
      121 tgcgagaggt tctcgccgta gaggtagaag aacacggcgt cgccgtcgct ccagtggcgc
      181 agcacgccga aggcgccctt cagcaggtgg tcctgcaggg ccaggtccag gggcttgtcc
      241 gtgcggaaat cccaggggcc cacgtgggcg tgggccaccg atgggtagcc cacctccgtg
      301 atcatcacgg gcttggggcc cttggcatcg gcgaagcggg ccgagagggt gcggcccttg
      361 tagacgatcc accaccaggc atcccggatc tggccggcgg agggataggc gtcgtacttg
      421 gcgatggggt cgtaggtgtt gatgccgatg acatccaggc agtcgccgaa ggtgaagctg
      481 tcgtggctgt cgaagttcac gctgtagacg agcttgccct tgaagacctg gcggacttcg
      541 gcggccagcc gccgccactg gtccgggaag gggtgggtgg aggccatctc ggtgccgagg
      601 ctgtaccact ccacgccgcc ctcctgggcc agggccgcca ggcgcacgtt gaagtccgtg
      661 tagttgcgcc accacaggtc ccagttggat ggctcgatgt tgccccgcca ccagtcggcg
      721 ttgtccgcct cgtcccgcag gttgatggtg gggaagaaca tcatgcgcag gccgcgcacc
      781 ttcgcctggc ggaaggtgcg gcgcaggctc tcctccgtgg ggctggaggt ggggtggcgg
      841 cggatctcgg tgctgtggcc cgtgtccatg cggtagatgg cctggaggct cacgcaggtg
      901 gcccccgtgg ccgcgatgcg gtccagctcc tccccgtagt cgtagtccgg cacgcccgca
      961 tagaggccca ggacgaagcc ccggggctgg ggcaccaggg ccttgcgctg agaccggcgg
     1021 accagcagca gggcgagggg caggcccagg atggccagga ggatgaggat gcggcggacc
     1081 atgaagactc cggcttccag gttagcgggg aggctttgag actggaggca ggagtctgga
     1141 gtctggaggt actgctctct gggcggccta tggccgcgac gggtgtttca agctgggccg
     1201 ttcagatggg taggcgccga atggcaacat tgccgcgctg cacagcagcg cctcaggaat
     1261 ccgtacctcc agactccaga ctccagactt ccggcctacg tccgttccac ccgcacctgc
     1321 acgatccgcg cgccttccat gcgcagcacc gtgagccggg cgccctcgac gtccacggct
     1381 tcctggggct tggggatgca gccgaggcgg gccaggacca ggccggccag ggtgtcgaag
     1441 ccctccccct cccaggcgtc gaggcccagg cgctgggcca cgtcctccac atgggcctgg
     1501 ccggagacca ggtagatgcc gggggcctgc tccaccaggc cggcgggggc ttcgtgctcg
     1561 tcctggatct cgccgaagac ctcttccagc aggtcctcca tggtggccag gccggacacg
     1621 ccgccgaatt cgtccaccac gatggccagc tgggtgcggg tgcgctgcat ctcgcggagc
     1681 aggtccatca cgggcttgct ttcgggcacg aagcgggggg gcttcatgag tgtggccagg
     1741 gcgggatgct cgccatccgg cagctggatg aggtccttga gcaggagcac gccgcggatg
     1801 tggtcgatgc ccccctcgaa gatgggcagg cgggagtggc gggtgcgggt gaaggcctgc
     1861 caggcctggg gaatggtggc ctccaggggc agggccgcga tgcgggtgcg gggcgtcatc
     1921 acctcgcgca cgagggtgtc gccgaaggtg acgacattgc ggatgagctc ccggtccccg
     1981 gcctccagga tgccctcggc ctcgccctct tccagcaggg cggtgacggc ctcctcggtg
     2041 gcatcctcgg gctcggcctc cttggcgcgg tcctgggtcc gccggtccac gaggtgggcc
     2101 agggggtcca ccaggagggc cagcaggggg tggatgggcg cgtagagggg gaagaggcgg
     2161 atgagccacc gggtgggatc gccgggggtg aggaggaccg gcagggccag gtccagggcc
     2221 cagaggcccg ccagcacgag gaaggccagg ctccagccgc cgccgggcag gacgatgcgg
     2281 aagggccaga ggagggcgag gagggccagc aggagggcct ggttccagaa ggcgagcccc
     2341 atgcccaggg cctggggccg ctccaggagg gcggccaggc gcggatcctg gaccaggtcc
     2401 tcctccagga tccggcggcg ctggagggag ggcatgctgt ggaacgccga cagcagggct
     2461 gtggtggcgc tgcggtagat gagcagcgcc agggcggcga gcagaagcca ggatgcgggg
     2521 gtgttgatgc ctgaatcagc catggtttgg atgattctag cgggtcccgc cgctgcgtgc
     2581 ctggatcagc ctggcgatgt ccgccctggc ttcggggctg aggtgcagct tccggcgtcc
     2641 ggcctcgcgg aaatactcct cgggatcgcg gcagaggcca tcgggcgtgg ggggcaggcc
     2701 cttgcgggcc cgggcggcgt tcaggaaggc gtagggctcc ttggccagct cggggctttg
     2761 caggaagtgc cggacggtcc accagccgcc cagcacgcac cagatgccca gggcggccac
     2821 ggccttgtgc tggaggctcc gcatgaggtc cggggtcagg cggaccttct gccaggcgat
     2881 gcccgcccag aggttcaggc cgatgacggc ggcggtcagc aggagcgtgc ccgtccagcc
     2941 caggctgccc cagccccagc ccgtgaggcc gatgacggcg ggggccagca ggacgctgaa
     3001 gagcagattc aggtggagca tgtagagcag cagcgattcg gcgctggcgg ccttgatggg
     3061 attggggccc ttccaccggg ggcggaccag ctccacggcg cccatgagga ccccggccag
     3121 gaggatccag cccagacggg ccgccacgct gggcagggtg gtgttggcga tggcgcccag
     3181 ttcgctgtag gtgaaagcgc ccgtgcggct gtgcagcatc cacgtgccgt tctgctggat
     3241 ccaggtgccg ccccagagcc agctctgctg ggccgaggtt ccccaggcca gcagcagggc
     3301 gccgaggatg gccaggcctg cgaggaagcg ggcctcgctc cagcgggcct tgccttcttc
     3361 gggcatgacc cggaagtggc ggtagagccc ccccaggaag gcgccgaagg ccgggaaggc
     3421 gatccagggg aagagcggga acagggcctg cacgccgcgg tccgggttgc cgttgaagag
     3481 cccgcggatg ggcagccaca ggccgtcggc gacgcccgtg gcccagaggt ggggcgcgac
     3541 cacgggcacg aagacggcga tggccagggc gaggcccgtg aacacccggg gattccgcac
     3601 gagccgcgcc aggccctgga ggatgaacag cgagaatacg atgcactgga gcacgtcgat
     3661 cttgaacagc tcccgggcct gctggggcgt gttcagcacg gtccagtccg cgagggtgat
     3721 cccgggcgca tgcagggcgt aggcgcagag caggatgaac cccaggcgcc gggccgtgtc
     3781 cggccagaag gggcgcaggg tgccgtccgt ccggaaggtc gatatcacca ggctgtagcc
     3841 cgcggccatg gtgaagctgg gcgccaccag gccgttgagg tagttcagcc agtccgggcg
     3901 gagcccggac tgcagccaga cgttcaccac atgcacttcg atcatcacga tcaccgccca
     3961 gccccgaagc tggtcgatcc agtcgcagcg cttggagggg gtcaggtcgg tccagaggga
     4021 catggagcct tcctagctgg cctgctgccg catgacgctg tgcttcttcc cgtagaggaa
     4081 gtagatggcg aagcccaggc ccagccaggc gatgaggcgc caccagttgg ccacgggcag
     4141 ggagaacatg agcatgaggc aggtgaggac gcccatgacg ggcacgaagg gcacccaggg
     4201 gcagcggaag ggccgttcgg cctcgggatg cttcttgcgc atgatgagca cggcggcgca
     4261 gacgatgacg aaggccagca gcgtgccgat gttcgccagg tgcagcaggg cgtcgatggg
     4321 caggaagccc gccagggcgc ccacgaagag gcccacgagg atggtggact tccagggggt
     4381 gcggaacttg gggtgcacgt cgccgaaggt ggccttgggc agcaggccgt cccgggccat
     4441 ggccaggaac acgcggggac cgctcagcat catcaccagc agcacggagg tgatgcccgc
     4501 cacgcccgcc gtggcgatga ggccctcggc ccaccccatg cccttctggc tgaaggcggt
     4561 ggagacgggg gcgttgatgt ccagctggtc gaacttcacc atgcccgtga gcacggccac
     4621 cacggcgatg tagagcaccg tgcagaccag cagggagacg atgatgccga tgggcacgtc
     4681 ccgctggggg ttcttggcct cttccgcatg ggtggagacc gaatcgaaac cgatgtaggc
     4741 gaagaagatg atggccgcgc cggccatggt gccgatgggg gccccgcccc cgtccaccat
     4801 gcccgcgacc cggtgcccga agaagctgat gccggtccag ccgaaggggg cgaaggggtg
     4861 ccagttggtg gtgttgatga agaaggcgcc cacgccgatg acgaagagca cggcggccac
     4921 cttgatggtc accatgatgc cgttgaaggt ggcgctctcc tggatgccct tcaccaggac
     4981 ggcggtgatg atcgccacga tgatgagggc gggcaggttc atcacggcgc ccgtggaggc
     5041 gaagtggccc gtggccgggt cgtatttcca gggcgattcg ctcaccagct tcggaatgtg
     5101 gatgccgatc ttgctgacgg cgctctggaa gtaggcggac cagcccgtgg ccacggcggc
     5161 gctggagacg ccgtactcga ggatgaggtc ccagccgatg atccaggcga acagctcgcc
     5221 gagcgtggcg taggcgtagg tgtaggccga ccccgccacg ggcaccatgg ccgcgaactc
     5281 tgcgtagcac agcgccgcga agatgcaggt gatgccggcg atgacgtagg acaccatcag
     5341 cgagggaccg gcgatgttgt gggcggcggc gccggtggcc acgaagatgc cggcgccgat
     5401 gatggcgccg atgcccaggg ccgtgagctg cacgggaccg aggacacggc ggagacggtt
     5461 ctcccccttg gcttcctcga ggagcagggc caggggcttg cgggcgaaca tctgggaggg
     5521 ggggcgcggg tcgttcgaca tgaacaagac tccatgcgat ccgggtgggg tgcccggaag
     5581 ggggttccag gaagatggcg gccaggggct tccggcgatg ctatcaccag gagcgggggc
     5641 tatgatgccc catgctcccg gccagcctcc tttcccgcct ggcggcggtc cgcggctccc
     5701 tgctgctctg ccggggctgc ctcggccccg tggcgggggg atcggaagcg ggtctctgcg
     5761 cccggtgctg ggcgggcctg caacccctgc ccgaggggcg ctgcccccgc tgcgccctgg
     5821 tgcatgcgga ggaggcctgc cccgaggcca cggcctggac tcggggggat gccctctggg
     5881 actaccatgg cggtcgcccg cccctgggtg ccctgctgct gccgggcatc aagcagggtg
     5941 aggggggatg gcggcgggcc ctgctggacc gcctggcccg ggcccccctg ccggactggg
     6001 tcctggacgt ggaccgggtg gccgcggccc ccagcgccct cccccgccgc ctgctgcggg
     6061 gtttcgacct gggcgcagag gcggcgcggg tgctggcggg gcgcatcggc cgccccttcg
     6121 agcccctgct ggccaaggcc tggttcagcg gccggcaggc ctcgcgcacg gaatccgagc
     6181 ggcggcgcct gccgcggaag gccgtgtctc tgcgccgggg cgccgcgccg ggcggtgcca
     6241 tcctgctggt ggatgacgtc tggaccaccg gcaccaccct gctgcgctgc gcccaggccc
     6301 tgcgggaggg cggggcggag gaggtgcggg tgctgacgct gttccgggcg ttgtagggga
     6361 ttgagaccgg agaccggagt ctggagatac agattcctgt ggcgccgctg cgcggcgcag
     6421 caagatctca atgcggcgcc tacccaccgg aacgggccaa ccgaaaacaa tcatcgcggc
     6481 catcggccgc ccagaaagca gtacctccag actccagact ccagactcca gactccagac
     6541 tccagacccc ggtctccagc ccgcctaccc cagcccctgc cgcatcggca cggccctccc
     6601 ggcggcccgc aggtaagagg cgggccaggg cacctccacg cccagggcct gcgcggcgcg
     6661 caggggccaa cgggggtcgc gcagcagttc gcggcccagc agcaccaggt cggcggattc
     6721 ctgggccagg atggcttcgg cctgctccgg atcggtgatg aggcccacgg cgccggtggg
     6781 gaggcccgcc ccggcgcgga tgcgcgcggc gaagggcacc tggtagccgg ggcccagggg
     6841 gatctcggcg cggggggcca ggccgccgga ggagcagtcc acgaggtcca cgcccagggc
     6901 cttcagttcc ctggccaggg ccacggactg gtcgagggtc cagccgcctt ccacccagtc
     6961 cgtggcggag atccgcacga ggaggggcag ctcctcgggc aggatgttgc gcaaggcgcc
     7021 caccacttcg cggaccaggc gcgtgcggtt ctcgaaggag ccgccgtagg catcggtgcg
     7081 gtggttcgac aggggtgaca ggaactggtg cagcaggtac ccgtgggcgg cgtggacctc
     7141 gatgacccgg aagcccgcgg ccacggcgcg gcgggccgcg tccatgaacg cttcgatgac
     7201 ggccaggatc ccaggctcat ccagggccgt gggcacggtc cagccttcgt cgaa
//
LOCUS       DASUDT010000102         5645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_292700, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000102 DASUDT010000000
VERSION     DASUDT010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5645
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292700"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..1097)
                     /locus_tag="VFV26_02170"
     CDS             complement(54..1097)
                     /locus_tag="VFV26_02170"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX4844993.1"
                     /translation="MDARLASGPVPAAEVMALGLYHPEHGYYRRQEGPWGFEGKDYYT
                     ALDLGPLLGQTLALRLEAAWERLGRPARFTVLEPGAGRGWLGRDVLNAVTGPFAEALV
                     YVHRDDNPAARRAAEEALSPFLAANRARFAVENEPLEPFIGAVFSNELFDALPAQPWR
                     WDGGQWTREVLTADGPQWQSAEPGEAGAWFAAHTDGLEPRDGSIWCEGLPGLVKELAG
                     ALEAGLFLAVDYGEPADRLLAKGADLRRFKAHSVDGKWHEDLGEADLTADVDFTRLAA
                     LLEAEGLSDLSHMELSKWIRTHAPLDQWGAGWMALPETDRKARTENLLQLTLPGMMGS
                     RFRVLEGWKERAI"
     gene            complement(1335..3896)
                     /locus_tag="VFV26_02175"
     CDS             complement(1335..3896)
                     /locus_tag="VFV26_02175"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX4844994.1"
                     /translation="MKALLRGILRLHLSRSSGLWLITAGLTLVLGWGALRVERALDLM
                     SLLPAEHPAVRANLEAGVGQQELVWLVAEGNEADLEARRAWAEGLVDRLLMGGDLPLN
                     GLAAEGRLSEPVPVPGPGGLSPWPALLAVGAITEGDAAVSRLTTETLYALAPAWLGDR
                     LAPLQDPGNLKRRLEATAKALGSPEPLPAALARLDPLGLRDLAPQNGEGMARAQALGR
                     AFTLRMRTGYLETKDGRFVLLPLVAGFPATDVKATTRALAWLGRGAEGPLPVSATLKA
                     VESALAPQGNRPFPVLVTGAHAITAWESHRLTIEVLLSLALSFVLIGLVYWLGFRTLA
                     GYGFVMVPLLVGMLWSLGLTGWILGRVNLMAAGFGAVLLGVGDDVGILLFSRYREERR
                     MGRTKPRALRSALLGTGPGVVAGALATALAFLALAFAPFPGIRDLGLTTGLGLLACLA
                     ATFLVMPPMLIWLDRGQGTFAPGPPPSRPRRRAWAPWAALGLLVFALVGAPRTRWEED
                     LRRFRAQGNPALTLQERLTKTLGASLQPLALQIPLEDPDRLPARWNRLSPVLREAGLP
                     VPDWQALDPELRHTLGSETWRRQVLETAAKAGLDPAGLEGPLSALAAAAADPSQPVRA
                     LQVLLPRASAQSGNPRPWTLWDRLHGNRTPAPLPPALTVPIRLDEASLARLTPEVEAA
                     GGRFVGTQPLFRVVKGIAHEAVQQAVLLALVGIFAVIAFFGRSLRFALLAMIPLLASQ
                     AGALGALGWTGEPLTFLSLMAIPIALGVSVDTAFNLLHRARAEADAPERVARVNAVCA
                     GTTLAGFGGMVFSGYRGLRGLGLACLGGVALALLLTQWLLPVLLEKWPLGAGERK"
     gene            complement(3901..4788)
                     /locus_tag="VFV26_02180"
     CDS             complement(3901..4788)
                     /locus_tag="VFV26_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844995.1"
                     /translation="MKGRPDCPRCQGQGLVFDPDPQKPVLVCGCTADVAPDAETLGLP
                     ARYREADFARFWKWWNNVQASHARALLDRVADLEDLLARPAEEVGDLEGREDLVKLLS
                     ALRKRPEHGIRPAGAESLFQWASNGKHKFRHGWELWWIHGPAQSGRSTLAAATLRAWT
                     ERTGKGGRFVSVRTLSQAVKDAYYDIRSFQNQAFQSVRDLIEPLQDPPLLVLDDWDRM
                     DSDLRVAAALAQLLDHRYSEELPTILTAAGPPEALDRRENHPLARLDDSSLMERLRGA
                     ERVEMVPALKPWIERMERG"
     gene            complement(4785..>5645)
                     /locus_tag="VFV26_02185"
     CDS             complement(4785..>5645)
                     /locus_tag="VFV26_02185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEX4844996.1"
                     /translation="QRHQDERSLDKYFDSIRDLPLLTAEEERKYGRLWQNDRNPEGLR
                     KLVEGNLRFVVKEARKFEGMGLDLLDLISEGNLGLIEAAKRFDPERLNKFLTYASWWV
                     RQAIFHALAEHGNKIRLPQKVAGHLVQLNRVTQKLSQSLGRAPMLQEIADAANLTVEE
                     VERLQLLQQTTSTVSTEQGLGDSDLTVGDSLEQEVEPSAMHTLDQEAFLEQIEASLAS
                     LSEKERRILTLHFGLGGEDPLTLEQIGKQFDPPISRERVRQLEERAFSRIRERRREVL
                     GGFLRGGDGP"
BASE COUNT          854 a         1945 c         2064 g          782 t
ORIGIN      
        1 acacagatga aagaggctgt acttaatccg tgttcatccg tgttcatccg tggctaaatc
       61 gctctttcct tccagccctc cagcaccctg aaccggctgc ccatcatgcc ggggagggtg
      121 agctggagca ggttctcggt gcgggctttg cgatcggttt cgggcagggc catccatccg
      181 gcgccccact ggtccagggg tgcgtgggtg cggatccact tgctcaattc catgtgggac
      241 agatccgaca ggccttcggc ctccaaaagg gccgccagcc gcgtgaagtc cacatccgcg
      301 gtcagatccg cctcgcccag gtcctcgtgc cacttgccgt ccacgctgtg ggccttgaaa
      361 cggcgcagat ccgcgccctt ggccagcagc cggtccgcgg gctcgccgta gtccaccgcc
      421 aggaagaggc ccgcctccag cgccccggcc agctccttca ccagtcccgg caggccctcg
      481 caccagatgc tgccgtcgcg gggctccagg ccgtccgtgt gggccgcgaa ccaggccccg
      541 gcctcgccgg gctccgccga ctgccactgg ggaccgtcgg cggtcagcac ctcgcgggtc
      601 cactgtccgc cgtcccaccg ccagggctgg gcggggaggg catcgaagag ctcgttgctg
      661 aagacggcgc cgatgaacgg ttccaaaggt tcattttcta cggcgaaccg cgcgcggttc
      721 gccgcaagga acggcgaaag ggcttcttcg gcagcacgcc tggcggcggg gttgtcgtcg
      781 cggtggacgt agaccagggc ctcggcgaag ggacccgtca ccgcgttcag cacatcgcgg
      841 cccagccaac cacggcccgc gccgggctcc aggaccgtga agcgggcggg acggcccagc
      901 cgctcccagg ccgcctccag gcgcagggcg agggtctggc ccagcagcgg acccaggtcc
      961 agggccgtgt agtagtcctt gccttcgaag ccccagggac cctcctggcg gcggtagtag
     1021 ccgtgctccg gatggtagag gcccagggcc atgacctcgg cggcggggac ggggcctgag
     1081 gcgaggcgcg cgtccatcag ggattgaagt ggattcatgc cgagggttcc ttcgcggctt
     1141 tgagttcgag cttttccaaa aaaccagggc cgagccccgt gctcaccttg aaggcgcagc
     1201 ctagtattcg ctctgtgatg gcatcgaggt cagccaagga ttacctcgaa aagagaaaag
     1261 ccagagatga acggagatgg acagagataa aaaggcccgc tttatctccg ctcatctccg
     1321 tccacctccg gctttcattt cctctcccca gcgcccaaag gccacttctc cagcagcacg
     1381 ggcagcagcc actgggtgag cagcagggcc agggcgacgc cacccaggca ggccaggccg
     1441 aggccacgca ggccgcggta gccgctgaag accatgccgc cgaagccggc gagggtggtg
     1501 ccggcgcaga cggcgttcac gcgggccacc cgctcgggcg catctgcctc ggcccgggcc
     1561 cggtgcagca ggttgaaggc cgtgtccacg ctcacgccca gggcgatggg gatggccatg
     1621 agggagagga aggtcagggg ttcgccggtc cagcccaggg cgcccagggc cccggcctgg
     1681 ctggccagga gcgggatcat ggccagcagg gcgaaacgca ggctgcggcc gaagaaggcg
     1741 atgaccgcga agatccccac cagggccagc agcaccgcct gctgcacagc ctcgtgggca
     1801 atgcccttca ccacgcggaa gaggggctgg gtgcccacga agcggccccc ggcagcttcg
     1861 acctcgggcg tcaggcgcgc cagggaggcc tcatccagcc ggatgggcac cgtcagggcc
     1921 gggggcagtg gcgcgggtgt ccggttcccg tggaggcggt cccagagggt ccaggggcgg
     1981 gggttcccgg actgcgccga ggcccggggc agcagaacct ggagggcccg cacgggctgg
     2041 gagggatccg cggcggcggc ggccagggcc gacaggggcc cctccagacc cgccggatcc
     2101 aggcccgcct tggcggccgt ttccagcacc tggcggcgcc aggtctcgga ccccagggtg
     2161 tggcgcagct cgggatccag ggcctgccag tcgggcaccg ggaggcccgc ttcgcgaagc
     2221 acgggactga gccggttcca gcgggcgggc agccggtccg ggtcttccag ggggatctga
     2281 agggccaggg gctggaggct ggcgccgagg gtcttcgtca accgctcctg gagggtgagg
     2341 gccgggttgc cctgggcccg gaagcggcgc aggtcctcct cccaccgggt gcggggggcg
     2401 cccaccagcg cgaagaccag caggcccagt gcggcccagg gggcccaggc ccggcggcgg
     2461 ggccgggacg gcggggggcc gggagcgaag gtgccctgcc cgcggtccag ccagatcagc
     2521 atgggcggca tcaccaggaa ggtggccgcg aggcaggcca gcaggcccag ccccgtggtg
     2581 agcccgaggt cgcggatgcc ggggaagggc gcgaaggcca gggccaggaa ggccagggcc
     2641 gtggccaggg cgccggccac cacgccggga cccgtgccca gcagggccga gcgcagcgcc
     2701 cggggcttgg tgcggcccat ccggcgctct tcccggtagc ggctgaagag caggatgccc
     2761 acatcgtcac ccacgcccag cagcacggcg ccgaagcccg cggccatgag gttcacgcgg
     2821 cccaggatcc agcccgtgag ccccagggac cacagcatgc cgacgagcag ggggaccatg
     2881 acgaagccgt agcccgccag ggtgcggaac cccagccagt acaccaggcc gatgagcacg
     2941 aagctgaggg ccaggctgag gaggacctcg atcgtgagcc ggtgggattc ccaggcggtg
     3001 atggcgtggg cccccgtgac gagcaccggg aaggggcggt tcccctgggg cgccagggcg
     3061 gattcgaccg ccttcagggt ggccgagacg ggcaggggcc cttcggcccc gcgtcccagc
     3121 caggccaggg cccgggtggt ggccttcacg tccgtggcgg gaaagccggc caccagcggc
     3181 agcaggacga agcggccatc cttggtctcc aggtaccccg tgcgcatgcg cagggtgaag
     3241 gcccggccca gggcctgggc cctggccatg ccttcgccgt tctggggcgc caggtcccgg
     3301 aggcccaggg ggtccagccg ggccagggcc gcaggcagag gttcggggga gcccagggcc
     3361 ttggccgtgg cctccaggcg gcgcttcagg tttccgggat cctgcagggg cgccaggcga
     3421 tcccccagcc aggcgggagc cagggcgtag agggtctccg tggtcaggcg gctcacggcc
     3481 gcatcgcctt cggtgatggc gcccacggcc agcagggcgg gccaggggct gaggccgccg
     3541 gggccgggca cgggtacggg ctccgacagg cggccctcgg cggcgagacc gttgaggggc
     3601 aggtcccctc ccatgagcag gcggtccacc agcccctcgg cccaggcgcg gcgggcttcc
     3661 aggtcggcct cgttcccctc ggccaccagc cagaccagct cctgctggcc gactccggcc
     3721 tccaggttgg cccgcaccgc cgggtgttcc gcgggcagca ggctcatgag atccagggcc
     3781 cgctccacgc gcaaggcgcc ccaccccaga accaacgtga gtcccgcggt gatgagccac
     3841 aggccggagg agcgggacag gtgcaggcgg aggatgccgc gaagcagggc tttcatgggg
     3901 ctagccccgc tccatgcgct cgatccaggg cttcagggcc ggcaccatct ccacgcgctc
     3961 ggcgccccgg agacgctcca tcaggctgct gtcgtccagc cgcgccaggg ggtggttctc
     4021 ccggcggtcc agggcctcgg gggggcccgc cgccgtgaga atggtgggca gctcctcgct
     4081 gtagcgatgg tccagcagtt gggccagggc cgccgccacg cgcaggtccg agtccatgcg
     4141 gtcccagtca tccagcacca gcagcggcgg atcctgaagg ggctcgatca ggtcgcgcac
     4201 gctctggaag gcctggttct ggaagctgcg gatgtcgtag taggcgtcct tgacggcctg
     4261 gctcagggtc cgcacggaga cgaagcgtcc gcccttgcct gtgcgctccg tccaggcgcg
     4321 gagggtggcg gcggcgaggg tgctgcgccc gctttgcgcg gggccgtgga tccaccacag
     4381 ctcccacccg tggcggaact tgtgcttgcc gttggaggcc cactggaaga gcgactcggc
     4441 cccggcgggg cggatgccat gttcgggacg cttgcgcagc gccgaaagca gcttgacgag
     4501 gtcctcgcgc ccttccagat cacccacctc ctcggcgggc cgggccagca gatcctccag
     4561 gtccgccacg cggtccagca gggcgcgggc atggctggcc tggacgttgt tccaccactt
     4621 ccagaaacgt gcgaaatcgg cctcgcggta ccgggccggc aggcccaggg tttcggcatc
     4681 cggcgccacg tccgcggtgc agccgcagac cagcaccggc ttctgcggat ccggatcgaa
     4741 gacgaggccc tgcccctggc agcgcgggca gtcgggacgc cccttcatgg cccgtccccg
     4801 ccgcgcagga agccgcccag cacctcgcgg cggcgttcgc ggatgcgcga gaaggcccgc
     4861 tcctccagct gccgcacgcg ctcgcgggag atgggcgggt cgaactgctt gccgatctgc
     4921 tcgagggtga ggggatcctc tccgcccagg ccgaagtgca gggtgaggat gcgtcgctct
     4981 ttttcgctga gggaggccag gctggcttcg atctgctcca ggaaggcctc ctggtccagg
     5041 gtgtgcatgg ccgagggctc cacctcctgc tccaggctgt cgcccacggt gagatccgaa
     5101 tcgcccagcc cctgttcggt ggagacggtg gacgtggtct gctggagcag ctggaggcgc
     5161 tccacctcct ccaccgtcag gttcgcagca tccgcgatct cctgcagcat gggcgcgcgg
     5221 cccagagact ggctgagctt ctgggtcacg cggttcagct gcaccaggtg gcccgccacc
     5281 ttctggggca ggcggatctt gttcccgtgc tccgccagcg cgtggaagat ggcctgccgc
     5341 acccaccagg aggcgtaggt gaggaactta ttcaggcgct cgggatcgaa gcgcttggcc
     5401 gcctcgatga ggcccaggtt gccttcgctg atgaggtcca gcaggtcgag gcccatgcct
     5461 tcgaacttgc gggcctcctt caccacgaag cgcaggttgc cttccaccag cttccggagg
     5521 ccttcgggat tgcggtcgtt ctgccaaagg cggccgtact tccgctcctc ctcggccgtc
     5581 agcaggggca ggtcgcggat ggaatcgaag tacttgtcga gagagcgctc gtcctgatgc
     5641 cgctg
//
LOCUS       DASUDT010000103         2931 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_315043, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000103 DASUDT010000000
VERSION     DASUDT010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315043"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VFV26_02190"
     CDS             <1..1020
                     /locus_tag="VFV26_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4844997.1"
                     /translation="FREAATSLHEGIPKVELAHKALVRAVGHWPDAVAEQDRLRSAVL
                     ELEDLLALAQDQAIRWAASGADRIEAMEARLAMYERLARRHRCEPEELPAHQHGLKDE
                     QRSLLAGDAPVKELEAALAKAAEAYRAAAEALHGRRSEAIPKLEAEVQKRLGRLGMKG
                     ARIQLRLALAEEAGSPVQQSGRPVRVAAQGFSSLAIWIEPNPGEGFRPLAKIASGGEL
                     SRLMLALVGAGLSLGTGAGEGLTLVLDEVDAGLGGETALAVGKAVAELGRAHQVLAVT
                     HLAQVAARADRHGRLHKETEGGRTRSAMGWVAGEARTRELARLLSGHPDRPEALEHAK
                     VLLEG"
     gene            complement(1064..>2931)
                     /locus_tag="VFV26_02195"
     CDS             complement(1064..>2931)
                     /locus_tag="VFV26_02195"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HEX4844998.1"
                     /translation="DGIKHTDYLVDAHNGAILKSWNTLHTTAATGTGNSQYNGTVSLP
                     TNYTGTTYELRDMTRGAGGTYGNNVVTNLNPAATTSTATGTLYTDADNTWGDGANYVE
                     GSSTTAANGQTAAVDAMYGMAKSWDFFKNVHARNGIDGTGTATYSRVHISNSYDNAFW
                     SDSCFCMTYGDGSSFTTLTAIDVAGHEMSHGVTSRTANLTYSGEPGGLNESTSDIFGT
                     MIEYYARGGSGSTIGSTGGNWTIGEQLRATPLRYMYKPSLDGSSPDAWSSTLGSLDVH
                     YSSGPMNRCFYFLSQGATTTGNTSTTYLPSGMTGIGNDAASRIWFRALTVYLTSSSNY
                     AAARTAAINSAKDLYGAGSVQEQAVWNAFRGINVGSAWSGGSTDTTAPTVSASESGTS
                     GTITFSATASDNVGVSKVEFYVDGALQGTDTTSPYSMTMDSTTLANGTHSLVAKAYDA
                     AGNIGTSTAVSFSVSNATSGAELVLNGGFESGATNWTQTTGVIGTFTGQPAHTGSYDA
                     WMCGYGSAHTDYVYQQIAIPSTATGTLTFWLHIDSAETTTTTAYDTMKVQVLNTAGTV
                     LATLATYSNLNKATGYTQKSLSLSAYKGQTIRLRFYSVEDSSLQTSFVVDDVSVK"
BASE COUNT          394 a          846 c         1182 g          509 t
ORIGIN      
        1 ttccgggagg cggccaccag cctgcacgaa ggcatcccca aggtggagct ggcccacaag
       61 gcgctggtgc gggccgtggg ccattggccc gacgccgtgg cggagcagga ccggctgcgt
      121 tctgcggtgc ttgagctgga ggatctcctg gcgttggccc aggatcaggc gatccgctgg
      181 gcggcctccg gggcggaccg catcgaggcc atggaggcgc ggctggcgat gtacgaacgc
      241 ctggcccgcc gccaccgctg cgaaccggag gaactcccgg cgcaccagca tggcctgaag
      301 gatgagcagc gctccctgct ggcgggggac gcgccggtca aggagctgga agccgccctg
      361 gcgaaggccg cggaagccta ccgggcggct gccgaggccc tgcacggccg ccggagcgag
      421 gccatcccca agctggaggc cgaggtgcag aagcgcctgg gccgcctggg catgaagggg
      481 gcccggatcc agctgcggct ggccctggcg gaggaggccg gcagtcccgt ccagcagtcc
      541 gggcgcccgg tgcgtgtggc ggcccagggg ttctcgtccc tggccatctg gatcgaaccg
      601 aacccgggcg agggcttccg gcccctggcc aagatcgcct ccggcggcga gctgagccgc
      661 ctcatgctgg ccctggtggg cgcgggcctt tcgctgggca cgggcgcggg cgaggggctc
      721 acgctggtgc tggatgaagt ggacgcgggc ctgggcggcg aaacggccct ggccgtgggc
      781 aaggccgtgg ccgagctggg ccgggcccac caggtgctgg cggtgacgca cctggcccag
      841 gtggcggccc gggcggaccg gcatggccgc ctgcacaagg agaccgaagg cggccgcacc
      901 cgcagcgcca tgggctgggt ggcgggcgag gcgcgcaccc gggaactggc gcggctcttg
      961 tcgggccacc ccgatcgtcc cgaggccctg gagcacgcga aggtgctgct ggagggctga
     1021 aaaagggccg ccagtcggcg gccctttctg caatcaggtt cggctacttg acgctcacat
     1081 cgtccacgac gaaggaggtc tggaggctgc tgtcctccac ggagtagaag cgcaggcgga
     1141 tggtctggcc cttgtaggcg ctgaggctca gtgacttctg ggtgtagccc gtggccttgt
     1201 tcaggttcga gtaggtggcc agggtggcca gcacggtgcc agcggtgttg agcacctgca
     1261 ccttcatggt gtcgtaggcg gtggtggtcg tcgtttccgc cgagtcgatg tggagccaga
     1321 aggtcagggt gccagtggcc gtgctgggaa tggcgatctg ctggtagacg tagtcggtgt
     1381 gggcggaacc gtagccgcac atccaggcgt cgtaggagcc ggtgtgggcg ggctggccgg
     1441 tgaaggtgcc gatgacgccg gtggtctggg tccagttggt ggcgccgctt tcgaagccgc
     1501 cgttgaggac cagctcggcg ccggacgtgg cgttggacac ggagaagctg acggcggtgc
     1561 tggtgccgat gttgccggcg gcgtcatagg ccttggccac caggctgtgg gtgccgttgg
     1621 cgagggtggt gctgtccatg gtcatgctgt aggggctggt ggtgtccgtg ccctgcaggg
     1681 cgccgtccac gtagaattcc accttgctga cgcccacgtt gtccgaggcg gtggcgctga
     1741 aagtgatcgt gccgctggtg cccgattcgg aggccgagac agtgggggcg gtggtgtccg
     1801 tgctcccgcc agaccaggcc gagcccacgt tgatgccgcg gaatgcgttc cacacggcct
     1861 gttcctggac gctgccggcg ccgtagagat ccttggcgga attgatggct gcggtgcggg
     1921 cggcggcgta gttggagctg gaggtcaggt agaccgtgag ggcccggaac cagatgcggg
     1981 aggcggcgtc attgccgatg cccgtcatgc cggagggcag gtacgtggtg ctggtgttgc
     2041 ccgtggtggt agctccctgg ctgaggaagt agaagcagcg gttcatgggg ccgctggagt
     2101 agtgcacatc gaggctgccg agggtggagg accaggcgtc ggggctggag ccgtccaggc
     2161 tgggcttgta catgtagcgc aggggcgtgg cccggagctg ctcgccgatg gtccagttgc
     2221 cgccggtgct gccgatggtg ctgccggagc cgccgcgggc gtagtactcg atcatggtgc
     2281 cgaagatgtc cgaggtggac tcgttgaggc cgcccggctc gcccgaatag gtgaggttgg
     2341 cggtgcgcga ggtcacgcca tggctcatct cgtggcccgc cacgtcgatg gctgtcaacg
     2401 tcgtgaagga tgagccgtcg ccataggtca tgcagaagca gctgtcggac cagaaggcgt
     2461 tgtcatagct gttgctgatg tggacgcggc tgtaggtggc cgtgccggtg ccgtcgatgc
     2521 cgttccgggc gtggacgttc ttgaagaagt cccaggattt ggccatgccg tacatggcgt
     2581 ccaccgcggc ggtctggccg ttggcggcgg tggtggagga gccttccacg tagttggccc
     2641 catcgcccca ggtgttgtcg gcgtcggtgt agagggtgcc cgtggccgtg gaggtggtgg
     2701 cggcggggtt caggttggtg accacgttgt tgccgtaggt gccgccggcg ccgcgggtca
     2761 tgtcccgcag ctcgtaggtg gtgccggtgt agttcgtggg cagggagacg gtgccgttgt
     2821 actggctgtt gccggtgccg gtggccgcgg tggtgtggag ggtgttccag gacttcagga
     2881 tggcgccgtt gtgggcgtcc accaggtagt cggtgtgctt gatgccgtcc t
//
LOCUS       DASUDT010000104         5344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2148493, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000104 DASUDT010000000
VERSION     DASUDT010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5344
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2148493"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VFV26_02200"
     CDS             complement(<1..678)
                     /locus_tag="VFV26_02200"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4844999.1"
                     /translation="MIAFENLDVRYAAAKAPALKGLTLTLDQGIVGLLGPNGAGKSTL
                     LKALLGLLKPAAGSGTVLGVPLGAPEAAKLRARIGYMPEYDALIEDASAYEQVAFWGE
                     LSGLAPESARDRAHEVLYFVGLDEARYRPVSGYSTGMRQRVKLAQALVHSPELIFLDE
                     PTNGLDPDGRRRMLDLVLRVHAELGTGVILASHLLGDVERVADQLVILDHGQIKAAGS
                     MAGLRKAL"
     gene            785..1999
                     /locus_tag="VFV26_02205"
     CDS             785..1999
                     /locus_tag="VFV26_02205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845000.1"
                     /translation="MQLLDWPFLDAFQTGALVALFVSFATDALARRDRMIGWLALGCM
                     LVGLRHALLALASQPSANLDFLDRAQSLLVAFGFIALCTAFTELFPRHVPRRFPGWIA
                     LALLPNYLRNLGLPHPSLADTWMLHASHFSFLTGCGFIIYWTFRARRDGDPMGSRLFV
                     GISAVTLPVVVEVAAYSLFDLKVRLSGFSLLILAMAIGTSWQWFVVSALEDRVQRAEA
                     EIEVWRSLVPGNAFRTDRPSPHMEGIFGADWADRVRQAPEGPLVALDGTPYRLLTRTL
                     DHRERLGWYEREDDTQPGTHGFLSGWTVALGMEESPASARIQGWLRSWGAEVQVWGTV
                     PPREGPYPSVLIWAREPSILSVWREDDLLRRRSRWVQLGGPVTPGPHARLSLDLDAAS
                     LRDTLRDLLSRR"
     gene            2058..>5344
                     /gene="dnaE"
                     /locus_tag="VFV26_02210"
     CDS             2058..>5344
                     /gene="dnaE"
                     /locus_tag="VFV26_02210"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004226.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX4845001.1"
                     /translation="MSFAHLHLHTEHSLLDGLTRIPDLVKKCRASGMPAVAVTDHGNM
                     FGMMKLFDACEKTKDAEGNWAVKPILGCEVYVAPKTRFDRKLEAKNTTGEEGLEDCVD
                     PSGSRDAGYHLVLLAKNPTGFANLSKLVSAGFTEGFYYKPRIDKDILREHSEGLIALS
                     ACLGGEVQARILQNRLDQAERVARDFRDIFGEDFYLEIQDQGFEKEKEIIPFQQELAA
                     RLGIPLVGTNDAHYLNHEDADLHDTLLCIGTKTTKAKEKRMRFSTDQFFVKTPEEMRA
                     VFPDHPEYLERTLEIAAKVDLFPITRKPVTPRFPVPEGYDLESYFIHVARETFEARVA
                     GCRPLWQAGALKHSEEKYRARLAFELDMILKMGFPGYFLLVWDFIRKAREMGVPVGPG
                     RGSAAGSIVAWSMMITDIDPMQYDLLFERFLNPERVSMPDVDIDFCRDGRQKVIDYVT
                     EKYGQDKVSNIVTINQLKTKAVIKDVARVFEKDFAFANNLTKLVPQEPGKPITVGEAL
                     EKSDKLRELYETDPEVKNILDISARLEGLSRNTGVHAAGVIIAPDELTQFAPLSMDKD
                     KKVMVQYTMVEAERAGLLKMDFLGLETLTQIAKTQEVIARRHGQPKDMTTIRSFDDKK
                     TFELFAAGDTDGVFQFESGGMKQLLRQLGPDRFDDLIALNALFRPGPLGAGMGTTYVE
                     RRHGREPVTYMFPDLEPILSPTYGVILYQEQVMQIASLVAGYSLGEADMLRRAMGKKD
                     KEKMAKEKTKFIEQGAARGYDKAKVAEMFDLIEYFAGYGFNKSHSAAYAMVAYETAYL
                     KANYPVEFMAGLLSTKSGRTDDVAKYVQNCRESGIDVLGPDINESALDFTATGDRQIR
                     FGFAAVKGLGEAALQAILEARDAEGGFKDLFHALKSTDLQKANRKVWESLIKAGAFDS
                     LEPNRAALLQGLPDAVSAASRGGGDTGMTSLFDDAELASLSEDWRVPEGIEPWDRKTR
                     LAAEREVLGLFVSGHPLEEFADAIQVHTHGTLAKVLEDATAGRLRDRQEVSIGVMVTS
                     VAFKTNQKGEPWAILQVEDLAGKMEVLLMASKWDPVTKKPGLRPFDRYRHLAVPEAML
                     RITGELRV"
BASE COUNT          907 a         1877 c         1742 g          818 t
ORIGIN      
        1 cagggccttc cgcaggccgg ccatggagcc cgcggccttg atctggccgt gatcgaggat
       61 caccagctgg tccgccaccc gttccacatc gcccagcagg tgcgaggcca ggatgacccc
      121 cgtgcccagt tccgcgtgga cccgcagcac caggtccagc atgcggcggc ggccgtcggg
      181 atcgaggccg ttggtgggct cgtccaggaa gatcagctcg gggctgtgca ccagggcctg
      241 ggccagcttc acccgctggc gcatgcccgt ggagtagccg ctgacgggcc ggtagcgggc
      301 ctcgtccagc cccacgaaat agagcacctc gtgggcgcgg tcccgggcgg attccggcgc
      361 caggccgctc agctcgcccc agaaggccac ctgctcgtag gccgaggcat cctcgatgag
      421 ggcgtcgtac tcgggcatgt agccgatgcg ggcccgcagc ttggcggcct ccggcgcgcc
      481 caggggcacg cccagcaccg tgccgcttcc ggccgcgggc ttcagcaggc ccagcagggc
      541 cttcagcagg gtggacttgc cggcgccgtt gggccccagc aggcccacga tgccctggtc
      601 cagcgtcagg gtcagcccct tcagggcggg cgccttggcg gcggcgtagc gcacgtccag
      661 gttctcgaag gcgatcaacg gggcctccag gtgggtttca cggcatgctc caggatgttg
      721 tctgctacga gcggaggagg gaatggatta ggcttgtcgc atcatcctgc ccggaaggtc
      781 ccgcatgcaa ctcctggact ggcctttcct cgacgccttc caaaccgggg ccctggtcgc
      841 ccttttcgtc agcttcgcca ccgacgccct ggcccggcgg gaccgcatga tcggctggct
      901 ggccctgggc tgcatgctgg tcggcttgcg ccatgcgttg ctggccctcg cctcccagcc
      961 ctcggccaac ctggatttcc tggaccgggc ccagagcctg ctggtggcct tcgggttcat
     1021 cgcgctctgc acggccttca cggagctctt tccccgccat gtgccccggc ggttccccgg
     1081 gtggatcgcc ctggccctgc tgccgaacta cctccgcaac ctcgggctgc cgcatccgag
     1141 cctcgcagac acctggatgc tccacgcctc gcacttcagc ttcctgacag gctgcggatt
     1201 catcatctac tggaccttcc gggcccggcg ggatggcgac cccatgggca gcaggctctt
     1261 cgtggggatc tcggccgtca ccctgccggt ggtggtggag gtcgccgcct acagcctctt
     1321 cgacctcaag gtccgactct cgggtttcag cctcctcatc ctggccatgg ccatcggcac
     1381 ctcctggcag tggttcgtgg tcagcgccct ggaggaccgc gtccagcggg ccgaggccga
     1441 gatcgaggtc tggcgcagcc tcgtgcccgg caacgccttc cgcacggacc gcccttctcc
     1501 gcacatggaa gggatcttcg gagccgattg ggcagaccgg gtccgccagg cccccgaggg
     1561 cccgctggtg gccctggacg gcacccccta ccggctcctc acccggaccc tggaccaccg
     1621 cgagcggctg ggttggtacg aacgggagga tgacacccag cccggcaccc atggcttcct
     1681 gtccggctgg accgtggccc tgggcatgga ggaatcccca gccagcgccc ggatccaggg
     1741 gtggctccgg agctggggcg ccgaggtcca ggtctggggc acggtcccgc cccgggaagg
     1801 tccctatccc agcgtcctca tctgggcccg ggaacccagc atcctctccg tgtggcggga
     1861 ggacgacctc ctgcggcggc ggtcccgctg ggtgcagctg ggcgggcccg tcacccccgg
     1921 cccccacgcc cgcctgagcc tggatctgga cgccgccagc ctgagagaca cgctccggga
     1981 tctgctctcg cggcgctaag agtgcctgaa cctcgggcac ttgccgcggg gcggcggatc
     2041 catcggagaa tgggggcatg agcttcgccc atctccacct gcacaccgaa cattcgctcc
     2101 tcgacggcct gacccgcatc cccgacctgg tgaagaagtg ccgggcctcc ggcatgcccg
     2161 ccgtggccgt caccgaccac gggaacatgt tcggcatgat gaagctcttc gatgcctgcg
     2221 aaaagacgaa ggacgccgaa ggcaactggg ccgtgaaacc catcctgggc tgcgaagtct
     2281 acgtggcccc caagacccgc ttcgaccgca agctcgaggc caagaacacc accggcgagg
     2341 aaggcctgga ggactgcgtg gaccccagcg gcagccggga cgcgggctac catctggtgc
     2401 tgctggccaa gaacccgacg ggcttcgcca acctctcgaa actcgtgtcc gccggcttca
     2461 ccgagggctt ctactacaag ccgcgcatcg acaaggacat cctccgcgag cacagcgaag
     2521 ggctcatcgc actgtccgcc tgcctggggg gcgaagtcca ggcccgcatc ctccagaacc
     2581 gcctggacca ggcggagcgg gtggcccggg acttccggga catcttcggc gaggacttct
     2641 acctggagat ccaggaccag ggcttcgaga aggagaagga gatcatcccc ttccagcagg
     2701 agctggccgc gcggctgggc atccccctgg tgggcaccaa cgacgcccac tacctcaacc
     2761 acgaggacgc cgacctccac gacacgctgc tgtgcatcgg cacgaagacc accaaggcca
     2821 aggagaagcg catgcgcttc tccacggacc agttcttcgt gaagacgccc gaggagatgc
     2881 gggccgtgtt ccccgatcat ccggaatacc tggagcgcac cctggagatc gccgccaagg
     2941 tggacctgtt ccccatcacg cggaagcccg tcacgccgcg ctttcccgtg cccgaaggct
     3001 acgacctgga atcctacttc atccatgtgg ccagggagac gttcgaagcc cgcgtggccg
     3061 ggtgccggcc cctctggcag gcgggcgccc tgaagcactc cgaggagaaa taccgcgcac
     3121 gcctggcttt cgagctggac atgatcctga agatgggctt cccgggctac ttcctgctgg
     3181 tctgggactt catccgcaag gcccgggaga tgggcgtgcc cgtgggcccc ggccgcggct
     3241 ccgcggcggg cagcatcgtg gcgtggtcca tgatgatcac ggacatcgat cccatgcagt
     3301 acgacctgct gttcgagcgc ttcctgaacc ccgagcgcgt gtccatgccc gacgtggaca
     3361 tcgacttctg ccgtgacggc cgccagaagg tcatcgacta cgtcaccgag aagtacggcc
     3421 aggacaaggt cagcaacatc gtcaccatca accagctcaa gaccaaggcc gtcatcaagg
     3481 atgtggcgcg ggtcttcgag aaggacttcg ccttcgccaa caacctcacc aagctggtgc
     3541 cccaggagcc cggcaagccc atcaccgtgg gcgaggcgct ggagaagagc gacaagctgc
     3601 gggaactcta cgagaccgat cccgaggtga agaacatcct cgacatctcc gcgcgcctgg
     3661 agggcctgtc ccgcaacacc ggggtgcacg cggcgggcgt catcatcgcc ccggacgagc
     3721 tgacccagtt cgcgccgctg tccatggaca aggacaagaa ggtgatggtg cagtacacca
     3781 tggtcgaggc cgagcgcgcg ggcctgctga agatggactt cctgggcctg gagacgctca
     3841 cccagatcgc caagacccag gaggtcatcg cccggcgcca cggccagccc aaggacatga
     3901 ccaccatccg ctccttcgac gacaagaaga ccttcgagct cttcgcggcg ggcgacacgg
     3961 acggagtctt ccagttcgaa tccggcggca tgaagcagct gctgcgccag ctggggcccg
     4021 accgcttcga cgacctcatc gcgctcaacg cgctcttccg cccgggcccg ctcggcgcag
     4081 gcatgggcac cacgtacgtg gagcgccgcc acggccgcga gcccgtgacc tacatgttcc
     4141 cggatctgga gcccatcctc tcccccacct acggcgtgat cctctaccag gagcaggtga
     4201 tgcagatcgc cagcctcgtg gccgggtatt ccctgggcga ggccgacatg ctgcgccgcg
     4261 ccatgggcaa gaaggacaag gagaagatgg ccaaggagaa gaccaagttc atcgagcagg
     4321 gcgccgcccg cggctatgac aaggccaagg tcgcggagat gttcgacctc atcgagtact
     4381 tcgcgggcta cggcttcaac aagagccaca gcgccgccta cgccatggtg gcctacgaga
     4441 ccgcctacct gaaggccaac tacccggtgg agttcatggc cgggctgctt tccaccaagt
     4501 ccggccgcac ggacgatgtg gccaagtacg tgcagaactg ccgggagagc ggcatcgacg
     4561 tgctgggccc ggacatcaac gagtcggcgc tggatttcac ggccacgggg gaccggcaga
     4621 tccggttcgg cttcgccgcc gtcaaggggc tgggagaggc tgcgctgcag gccattctcg
     4681 aggcccgtga cgctgaaggt ggcttcaagg atctcttcca tgccctgaag agcaccgatc
     4741 tccagaaggc caaccgcaag gtgtgggaat ccctcatcaa ggcaggggcc ttcgacagcc
     4801 tggagcccaa ccgggccgcc ctgctccagg gccttcccga tgccgtgtcg gcggcctccc
     4861 gcgggggagg cgataccggc atgaccagcc tcttcgacga tgccgagctg gccagcctca
     4921 gcgaggattg gcgcgtgccc gaaggcatcg agccctggga ccgcaagacc cgcctcgccg
     4981 ccgagcggga ggtgctgggc cttttcgtca gcggccaccc gctggaggag ttcgccgatg
     5041 ccatccaggt gcacacccac ggcaccctgg ccaaggtgct ggaggatgcc accgcgggcc
     5101 gcctgaggga ccgccaggag gtgtccatcg gtgtgatggt caccagcgtg gccttcaaga
     5161 ccaaccagaa gggcgagccc tgggccatcc tccaggtgga ggacctggcc gggaagatgg
     5221 aagtgctgct catggccagc aagtgggatc ccgtcaccaa gaagcccggc ctccggccct
     5281 tcgaccgcta ccggcacctg gcggtgcccg aagccatgct gcgcatcacg ggcgagctgc
     5341 gggt
//
LOCUS       DASUDT010000105         4679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1993930, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000105 DASUDT010000000
VERSION     DASUDT010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4679
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993930"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VFV26_02215"
     CDS             <1..478
                     /locus_tag="VFV26_02215"
                     /inference="COORDINATES: protein motif:HMM:NF013038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HEX4845002.1"
                     /translation="THVRPGLALYGLTTLPEGRTLGLEPALELVAEVARVKAVPAGAT
                     VGYGRTFVAPHPLQIATLACGYADGYRRDLGNRAVVGFQGRTFPVVGRVSMDYLTVAL
                     PPDLDVTPGDPMTLFSGDPSAAHSLERLAQSLGTIPYELTCGLHRRITRRFFLTSE"
     gene            516..1892
                     /locus_tag="VFV26_02220"
     CDS             516..1892
                     /locus_tag="VFV26_02220"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4845003.1"
                     /translation="MNLLVITRHEDLVERLRMAFEGAGHRVLHMGDPLEALAKDAWTE
                     AHALLVDAGGDPMDGYRLCRLLRSETRVLFRNLPIFLVVDHPPMESDLLALQEAGGDG
                     FIPAGHTIQQLMTHLGPVMAGAASRGEARRVPVLGLGLHPEVAIRSRELLHHFLMELH
                     TPPVRNAAEAQKALKAPVLLLGLAGGVGAALARMEHLREQGGLPYTILVGQVKDEATQ
                     RKLLLAGVSDWVPLPISGPRLLHACKRAIEWVHARRIQVEYESAIHDLRERRSMLEIE
                     AAALRSEVLTDPLTELLNRRAFDQNLEHAIRQWERHRRAFVLLLGDVDHFKLINDRFG
                     HPVGDEVLRQMAARIRTGLRKSDLAFRIGGEEFAVLLTETSLKAGADVADKLRRRIDE
                     EPMVLPAGQIIFPTMSFGVGGPDAHSPTALLAMVDRALYQAKRLGRNRVVVAGGGEHP
                     PRAVSGGN"
     gene            complement(1876..4158)
                     /locus_tag="VFV26_02225"
     CDS             complement(1876..4158)
                     /locus_tag="VFV26_02225"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HEX4845004.1"
                     /translation="MLGALPVLLAAQGLPEIPLPAPLEAPTPVELLPLRPFRVEGGPG
                     LSRVPFDWRGDRVSEQGDLWILEQGAIQAEGLLLLADRIEYHIADGRLVAQGHIRLEG
                     PGLRLRGERLQMDWERRSGEAWALQMDLLPTWVLRSAHVAFTTLRTWSFDAVELSPCP
                     EENPGWKARLSSLKVDLDGFATLWNARVQLGAVPIYYVPYALYPAQAERTSGLLPPKL
                     GMSSTFGTTVGLSYYQAMGNSADATLSPEYFAKEGVLWGGEMRWRPDLTHSGSVSGQT
                     IHQRSLDTRRYRYSLKEVWQREDGWQLTADVNQASDNLVDADFGKGIGYLGATSFDSA
                     IYLGRSFTFGSLSLSAAEQRSFFYTKDEGDPFYSPDFPASLRRQTLPQAEFRFFPVPL
                     LGPLYLDGGIRAGRFAYRIEGDAAASGQAYAWGRQDANARIHGRLGQWGPFRVDFEAM
                     GRGTHYSSSLGSPVFDPEGGTTDTAVDPATSPFQVDGPAATRFLGSGHLRLSGPQVGR
                     SFKEVSILGYKGELKHVAEPYFGWTETSSYGEAGTLPRFDTVDSFPGVNESATGERSF
                     ELGLKQHILGRPGSGSGFADLARLRIATRYHASPIILSDGRYKKGWSSVDTDLDVEPD
                     ERFRISLRRSSDLGAGGSDNALSLDVKAKDGNRFNLAYFSTGINRFLVRQKGLQVGGI
                     QRVWDDRLRLEFSANYDFNQKGFASSQVALAYVEPCVAYVLKYTHVALNTVLVSGGRE
                     DRIDLTLTLRGLGDLFSFRR"
     gene            complement(4196..>4679)
                     /locus_tag="VFV26_02230"
     CDS             complement(4196..>4679)
                     /locus_tag="VFV26_02230"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEX4845005.1"
                     /translation="GITLHFHYGEETHKDGSPLSGVLALVGLSLHSLMDGVAIAAALS
                     THSNLGPLVVLGILFHRIPEGGTIASIFLVRGFGNRGALMAAGTLALAALVGSAGQSM
                     LNLPTGPILGLTAGLALYVASSDLLPEVQKVSGLRSTVALLSGVGIFLLSARLLPHQH
                     "
BASE COUNT          730 a         1633 c         1614 g          702 t
ORIGIN      
        1 cacccacgtg cgtcccggcc tggccctgta cggcctgacc accctgcccg agggacggac
       61 cctgggactg gaacccgccc tggagctggt ggccgaggtg gcccgggtga aagccgttcc
      121 cgcgggcgcc acggtgggct acggccgcac cttcgtcgcg ccccatcccc tccagatcgc
      181 caccctggcc tgcggctacg cggatggcta ccggcgggac ctcggcaacc gggcggtggt
      241 cggcttccag ggccgcacct tccccgtggt gggccgggtg tccatggatt acctcaccgt
      301 ggccctgccc ccggacctgg acgtgacccc cggggacccc atgacgctct tcagcggcga
      361 tccctccgcg gcccacagcc tcgaacgcct ggcccagtcc ctcggcacca tcccctatga
      421 gctgacctgc gggctccatc gccgaatcac gcgccgtttt ttcctaacca gtgaatgaac
      481 tgcattacca ttggggcact ccgtttcgga tacccatgaa tctgctggtc atcacccgcc
      541 atgaagacct cgtcgagcgc cttcgcatgg ccttcgaggg ggccgggcac cgggtgctcc
      601 acatggggga cccgctggag gccctcgcca aggatgcttg gaccgaggcc cacgccctgc
      661 tggtggatgc cgggggtgat cccatggacg gctaccggct ctgccgcctg ttgcggagtg
      721 aaacccgcgt gctcttcagg aacctgccca tcttcctggt ggtggaccat ccgcccatgg
      781 aatcagacct tctggctctc caggaggccg gaggggacgg gttcattccg gcgggccaca
      841 ccatccagca gttgatgacc cacctgggcc ccgtgatggc gggggccgcc tcccggggag
      901 aggcccggcg ggtgcccgtg ctgggcctgg gcctccaccc ggaggtggcc atccgctccc
      961 gggaactgct ccaccacttc ctcatggagc tgcacacccc ccccgtccgg aacgccgcgg
     1021 aggcccagaa ggccctgaag gcccccgtgc tgctcctggg ccttgccgga ggcgtgggcg
     1081 cggccctggc ccggatggaa cacctgcgcg agcagggcgg cctcccctac accatccttg
     1141 tcgggcaggt gaaggacgag gccacccagc gcaagcttct gctggcgggg gtgtcggact
     1201 gggtgcccct gcccatctcc ggtccccggc tgctccacgc gtgcaagcgg gccatcgaat
     1261 gggtgcacgc ccggcgcatc caggtggagt acgaatccgc catccacgac ctccgcgaac
     1321 gccgcagcat gctggaaatc gaggctgcgg cgctgcgcag cgaggtcctc accgatcccc
     1381 tcaccgaact gctcaaccgg cgcgccttcg accagaacct ggagcacgcc atccggcagt
     1441 gggagcgcca tcgccgggcc ttcgtcctgc tgctgggcga cgtggaccac ttcaagctca
     1501 tcaacgaccg gttcggccac cctgtgggcg acgaggtgct gcgccagatg gccgcccgca
     1561 tccggaccgg cctccgcaaa tccgacctgg ccttccgcat cggcggcgag gagttcgccg
     1621 tgctgctcac cgaaaccagc ctcaaggccg gcgcggatgt ggcggacaag ctgaggcgcc
     1681 gcatcgatga agagcccatg gtcctgcccg cgggccagat catcttcccc accatgagct
     1741 tcggcgtggg cggcccggat gcccacagtc ccaccgccct gctggccatg gtggaccggg
     1801 ccctctatca ggccaagcgc ctgggccgga accgggtggt ggtggccggg ggcggcgagc
     1861 acccgcccag ggccgtcagc ggcggaaact gaagaggtcg cccagtccgc gaagggtcag
     1921 ggtcaggtcg atgcggtctt cccgcccccc ggacaccagg accgtgttca aggctacgtg
     1981 ggtgtatttc agcacgtagg ccacgcaggg ctccacgtag gccagggcca cctggctgga
     2041 ggcgaagccc ttctggttga agtcgtagtt ggcgctgaac tccaggcgga gccggtcatc
     2101 ccagacgcgc tggatgccgc ccacctgcag gcccttctgg cgcaccagga agcggttgat
     2161 gcccgtggag aagtaggcca ggttgaagcg gttgccatcc ttcgccttca catccaggct
     2221 cagggcgtta tccgatccgc cggcgccgag gtccgacgac cggcggaggc tgatgcggaa
     2281 gcgctcgtcc ggttccacgt ccagatccgt atccacgctg gaccagccct tcttgtaccg
     2341 cccgtcgctc aggatgatgg gagaggcgtg gtagcgggtg gcgatgcgca ggcgggccag
     2401 gtcggcgaag cccgagccgg aacccgggcg cccgaggatg tgctgcttga gccccagttc
     2461 gaagctccgt tctcccgtgg cgctctcgtt cacgcccggg aaggagtcca ccgtatcgaa
     2521 ccggggcagc gtcccagcct cgccgtacga gctggtttcc gtccacccga agtagggctc
     2581 ggccacatgc ttgagctcgc ccttgtagcc gaggatcgag acctccttga agctacggcc
     2641 cacctggggg cccgatagcc gcaggtgccc cgagcccagg aaccgcgtgg ccgcggggcc
     2701 atccacctgg aaagggctgg tggcgggatc caccgccgta tccgtggtgc cgccctcggg
     2761 gtcgaagacc ggtgagccga ggctcgagct gtagtgggtt ccacggccca tggcttcgaa
     2821 atccacccgg aaggggcccc actggcccag gcgcccgtgg atgcgggcat tggcgtcctg
     2881 gcggccccag gcgtaggcct gcccggaagc tgccgcatcc ccctcgatgc ggtaggcaaa
     2941 gcggcccgcc cggatgcctc catccaggta gagcggaccc agcagcggga cggggaagaa
     3001 ccggaactcg gcctggggca gcgtctgccg ccggagcgag gccgggaaat ccgggctgta
     3061 gaagggatcc ccctcgtcct tggtatagaa gaagctgcgc tgctcggcgg cggaaaggct
     3121 gaggctcccg aaggtgaagc tgcgccccag gtagatggcc gaatcaaagc tggtggcgcc
     3181 caggtagccg atgcccttcc cgaaatccgc atccaccagg ttgtccgagg cctggttcac
     3241 atcagccgtg agctgccatc catcctcgcg ttgccagact tccttgagcg aatagcggta
     3301 gcggcgggta tcgagactcc gctggtggat ggtctggccc gagacgctgc ccgagtgggt
     3361 caggtccggc cgccagcgca tctcgccgcc ccacaggacg ccctccttgg cgaagtattc
     3421 cggagacaac gtggcatcgg ccgagttccc catggcctgg tagtaggaga gccccacggt
     3481 ggtgccgaag gtgctggaca tgccgagttt cggggggagc aggcccgagg tccgttccgc
     3541 ctgggccgga tagagggcgt agggaacgta gtagatcggg actgccccca gctggacccg
     3601 ggcattccac agggtcgcga agccgtccag atccaccttc agcgaggaga gccgggcctt
     3661 ccagccgggg ttctcctccg ggcaggggct cagttccacc gcgtcgaagg accaggtgcg
     3721 cagggtggtg aaggccacat gggctgagcg cagcacccag gtggggagca ggtccatctg
     3781 cagggcccag gcttcgccgg agcgtcgctc ccagtccatc tgcaggcgtt ctccccggag
     3841 gcgcaggccg gggccctcca ggcggatatg gccctgggcc accaggcgcc cgtcggcgat
     3901 gtggtattcg atgcggtccg ccagcagcag caggccctcg gcctggatgg cgccctgttc
     3961 caggatccac aggtcgccct gctcgctgac gcggtccccg cgccagtcga agggcacccg
     4021 ggacaggccc gggcctccct ccacccggaa ggggcggagc ggcagcagtt ccacgggtgt
     4081 gggtgcctcc aggggcgccg gcagcggaat ctccggcagc ccctgggccg ccagcaggac
     4141 tggcagggca cccagcatca ggcctcgggt cctcccgggg agcgccatgg cgcggtcagt
     4201 gctggtgcgg cagcagccgc gcgctgagga ggaagatccc caccccgctc aggagggcca
     4261 ccgtgctgcg caggcccgag accttctgca cttccggcag caggtccgag ctggccacgt
     4321 agagcgccag ccccgccgtg agccccagga tcgggcccgt cgggaggttc agcatggact
     4381 gacccgcgga tcccacgagg gcggccaggg ccagcgttcc cgccgccatg agcgcgcccc
     4441 ggttgccgaa gccccgcacc aggaagatgg aggcgatggt gcccccctcg ggaatgcggt
     4501 ggaacaggat gcccagcacc accaggggtc ccaggttgct gtgggtggag agcgccgcgg
     4561 cgatggcgac gccgtccatg aggctgtgca gggacaggcc cacgagggcg agcacgccgc
     4621 tgaggggcga tccatccttg tgggtctcct cgccatagtg gaagtggagc gtgatgccg
//
LOCUS       DASUDT010000106         5397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1817260, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000106 DASUDT010000000
VERSION     DASUDT010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817260"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..221)
                     /locus_tag="VFV26_02235"
     CDS             complement(87..221)
                     /locus_tag="VFV26_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845006.1"
                     /translation="MAAHHRPQAHLPLRFFTVEHPHAGDWALVTAGTLAALLLWYWNH
                     "
     gene            complement(518..2350)
                     /gene="glmS"
                     /locus_tag="VFV26_02240"
     CDS             complement(518..2350)
                     /gene="glmS"
                     /locus_tag="VFV26_02240"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX4845007.1"
                     /translation="MCGIVGYIGQQGAAGILVNGLRSLEYRGYDSAGVALSDPEGGFR
                     IVRASGKLVNLAGKVDLADPAPLGIGHTRWATHGRPTEENAHPHRSGDGQVVAVHNGI
                     FENFLELRAELKAAGETFRSETDTECFPVMVSHLMKRGLAFPEAFREAVGRMKGIYAL
                     ACLHASDKDRILAARSGPPLVLGLGEGETFLASDVVPLLPHTRQVIFLEDGDLVELTR
                     DGARIFGLDGVEIHRPVVTIPYDPVAAEKGGYKHFMQKEIFEQPQALSNTLLNRLPLD
                     GEAIPLDLPFSERDLADLNRIHIVACGTSWHSGLVGKFLIEQLSRVAVEVDYASEYRY
                     REPVIQPGTLIIGITQSGETADTLAAMKEAALRGARTLAICNVMGSTATRQSEACILT
                     HAGPEIGVASTKAFTTQLAVLTLLALKLGEAKGTVDPVLKAELLQGLRELPAHLERLN
                     ALEPKIIQWAHRWKDATDFLYLGRGPCYPIALEGALKLKEISYIHAEGYPAGEMKHGP
                     IALIDQTLPVVALMPKDAHRDKTLSNLQEAAARDGRILALVTEGDTGLSGIAEDVLEL
                     PAVHPWLAPIVYAVPLQLLAYHIAVLRGCDVDQPRNLAKSVTVE"
     gene            complement(2465..3388)
                     /gene="fliN"
                     /locus_tag="VFV26_02245"
     CDS             complement(2465..3388)
                     /gene="fliN"
                     /locus_tag="VFV26_02245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEX4845008.1"
                     /translation="MDPRDTELFQKVGSAFAESMASVFSMLTGREFQLKSTAGALVDP
                     AGAAALQGGSAILVKANYQKGLNGALFFVLPLKEGTMLVDLMLGGDGAPATELVGDSK
                     DALAETFNQVMGSANQTLSDLAGETFAIANVDILALEPAAAAFAEQMGQGSFQDILLP
                     TSQETLNTTIHLLFPDLLLQQLKRKLGLAEAPAAVAAPATATMAAPPPAQRAPVASGP
                     MHDSGNLDLLLDIQLPVVVRMGQTEMQMGELLKLTPGSILELNRSADAPVELLVNGKH
                     IARGEVVVVDGNFAFRITEIDSRAARIRSLG"
     gene            complement(3392..4408)
                     /gene="fliM"
                     /locus_tag="VFV26_02250"
     CDS             complement(3392..4408)
                     /gene="fliM"
                     /locus_tag="VFV26_02250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEX4845009.1"
                     /translation="MAKILSQEEVDALLKSHTKPAGKASSAQGQERGGGHPQAKKAQV
                     QRKVTLYNFRRPDRVSREQMRSLHFMHDRFARNFSSSLSAYLRTITEVNLVSVEQLSY
                     QEFLLSVPDPTCFNAISIKPLEGALALEVNPTLVFPIIDKMLGGPGDPLKQLRTMTDI
                     EQSIFDGVLKLVLEDLREAWRGIVDLDFRIQARETSPQLIQIVAPNEVVLLVVFEVKM
                     GPVSGMINLAIPSIILEPISNKFDQEMFTGYKKSSTFEEARLLMASLKRCPMEAAAEI
                     RGTSLRMEEVLQLKPGDLIPLTKRFDAELDLCVDGIPRFLGLVALNPNGKRVFQVTGS
                     RSEG"
     gene            complement(4412..5323)
                     /locus_tag="VFV26_02255"
     CDS             complement(4412..5323)
                     /locus_tag="VFV26_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FliA/WhiG family RNA polymerase sigma factor"
                     /protein_id="HEX4845010.1"
                     /translation="MSPTPDQTADPGQPLSGEALRAVEAAPAALRPWAALAAAKAYGS
                     ATPMASTPAAPAQTDSTEPPEPFDRNNREQIIKDYVPLVKFVAHRIASRLPSHVELDD
                     LINSGILGLMDAIEKFEPARNIKFKTYAELRIKGAILDGLRDLDWVPRSLRRKKKDIE
                     GAYHSLEQQMGRAATDEEVAVHLGIPLEELHKNLDELKGVTLGTFVEVGEDGEGESLI
                     SFVPDPDAEDPHQTFQASEIKEILRTAMEVLPKKEKFVVQLYYFDELTMKEIGTLLNI
                     TESRVSQLHTKAMLRLRGKLLEQQIRG"
BASE COUNT          836 a         1637 c         1953 g          971 t
ORIGIN      
        1 tacccctgag ctacgcgcca gcgcgaagct ccatgttagc ggaacggggg cggttgtcga
       61 gcctccagac ggggggcggg tccctctcag tggttccagt accacaacag gagggcggcc
      121 agggtaccgg cggtcaccaa ggcccagtcg ccggcatggg ggtgctccac ggtgaagaag
      181 cggaggggca gatgagcttg ggggcggtgg tgggcggcca tggcgacctc cgttccggtg
      241 gactgcggtt cgcctcaaac atggggcggg tgcgcccttg gcgccatgtc ctaagcggcc
      301 ttccggggac ttcagtgatg cgtggcaggc cagaagagcc aggcgaacag ggcgcccatg
      361 aggacgagta gccagtccag cagggtggaa tggtccggat cgcggcgcag gagggaatgg
      421 gcggccacgg cagcctcctt ccatgaatcc atggcccgag gatgcagccg gggccatggt
      481 gatgccgtga cttttctgga aattcgcagc cgtggcgcta ttccacggtc acgctcttgg
      541 cgaggttcct cggctggtcc acatcgcatc cccgcagaac cgcgatgtga taggccagca
      601 gctgcagggg cacggcgtag acgatggggg cgagccaggg gtgtacggcc ggcagttcga
      661 gcacgtcctc ggcgatgccg gaaaggcccg tgtcgccttc cgtgaccagg gccaggatgc
      721 gcccgtcgcg ggcggcggct tcctggaggt tgctgagggt cttgtcccgg tgggcgtcct
      781 tcggcatgag ggccaccacg ggcagggtct ggtcgatgag ggcgatgggg ccatgcttca
      841 tctccccggc cggatagcct tccgcgtgga tgtaggagat ctccttcagc ttcagggccc
      901 cctccagggc gatgggatag caggggcccc ggccgaggta gaggaaatcc gtggcgtcct
      961 tccagcggtg ggcccactgg atgatcttgg gttccagggc gttgagccgc tccagatggg
     1021 cgggcaattc gcggagtccc tggagcagct cggccttgag cacggggtcc acggtgccct
     1081 tggcctcgcc cagcttcagg gccagcaggg tgagcacggc cagctgggtg gtgaaggcct
     1141 tggtggaggc cacgccgatt tctggacccg catgggtcag gatgcaggcc tcggattgcc
     1201 gggtggccgt ggagcccatg acattgcaga tggcgagggt gcgggcgccg cgcagggcgg
     1261 cttccttcat ggcggccagg gtgtctgccg tctcgccgct ctgggtgatg ccgatgatga
     1321 gggtgccggg ctggatcacg ggttcgcggt agcggtactc gctggcgtag tccacttcca
     1381 cggccacgcg gctcagctgt tcgatgagga acttgcccac gaggccggag tgccagctgg
     1441 tgccgcaggc cacgatgtgg atgcggttga gatccgccag atcgcgctcg ctgaagggca
     1501 ggtccagggg gatggcctcc ccgtccaggg gcaggcggtt cagcagggtg ttcgacaggg
     1561 cctggggctg ctcgaagatc tccttctgca tgaagtgctt gtagccgccc ttttccgccg
     1621 cgaccggatc atagggaatg gtgaccacgg gccggtggat ctccacgcca tcaaggccga
     1681 agatccgggc accgtcacgg gtgagttcca ccaggtcgcc gtcctccagg aagatcacct
     1741 ggcgcgtgtg gggcaggagg ggcaccacat ctgaggcgag gaaggtctca ccctcgccca
     1801 ggcccagcac cagcggggga ccgctgcggg cggcgaggat gcggtccttg tccgaggcat
     1861 ggaggcaggc cagggcatag atgcccttca tgcggcccac ggcctcgcgg aaggcctcgg
     1921 ggaaggccag accccgcttc atcaggtggg acaccatcac ggggaagcac tcggtatccg
     1981 tttcggagcg gaaggtctcg cccgcggctt tcagctctgc gcgcagttcg aggaagtttt
     2041 cgaagatgcc gttgtggacg gccaccacct gcccgtcacc gctgcggtgc ggatgggcgt
     2101 tctcctccgt gggccggccg tgggtggccc atcgggtgtg gccgatgccc aggggcgcgg
     2161 ggtccgcgag atccaccttg cccgcgaggt tgaccagctt gcccgaggcc cggacgatgc
     2221 ggaagccgcc ttcaggatcc gagagggcca cgcccgcgct gtcgtagccc cggtattcaa
     2281 ggctccggag cccattcacc aggatgcccg cggcgccctg ctgaccgatg taaccgacaa
     2341 ttccgcacat gggtggctcc agtcgctagg ttctcaactt aacgaggtgg gccgctgaat
     2401 ccaatgtggt ggcaggcacc cgccctgcgg ccggaacccc gccacaggct gtggcgggac
     2461 cgactcaccc caggctgcgg atgcgggcgg cgcggctgtc gatctcggtg atccggaagg
     2521 cgaagttgcc gtccaccacc accacttcgc cccgggcgat gtgcttgccg ttcaccagca
     2581 gctccacggg cgcgtcggcg ctgcggttca attcgaggat cgagccgggc gtcagcttca
     2641 acagctcgcc catctgcatc tcggtctggc ccatgcggac caccacgggg agctggatgt
     2701 ccaggagcag gtcgaggttg ccggaatcgt gcatggggcc ggaagccacc ggggcccgct
     2761 gggcgggggg aggggcggcc atggtcgcgg ttgcgggtgc agcgaccgcc gcgggggcct
     2821 ccgcgaggcc cagcttgcgc ttcaactgct ggagaaggag atcaggaaag agcaggtgga
     2881 tggtggtgtt cagggtctcc tggctggtgg ggaggaggat gtcctgaaag gatccctgcc
     2941 ccatctgttc cgcgaaggcc gccgccgccg gctccagggc gaggatgtcc acattggcga
     3001 tggcgaaggt ttcgcctgcc agatcagaga gggtctggtt ggcgctgccc atgacctggt
     3061 tgaaggtctc ggccagggca tccttggagt cgcccaccag ctccgtggcc ggggcgccgt
     3121 ccccgccgag catgaggtcc accagcatgg tgccttcctt caggggaagg acgaagaaca
     3181 gggcgccgtt gagccccttc tggtagttgg ccttcaccag gatggcggaa ccgccctgga
     3241 gcgccgcggc gcccgccgga tccaccagcg ctccagcagt ggacttcagc tggaactcgc
     3301 ggcccgtgag catggagaac acggaagcca tgctttcggc gaaggcgctg ccgactttct
     3361 ggaagagttc agtgtcgcgg ggatccatgg ctcacccttc cgaccggctg ccggtcactt
     3421 ggaagactcg ttttccgttg ggattcaggg ccaccaggcc caggaagcgc gggatcccgt
     3481 ccacgcagag gtcgagctcc gcgtcgaagc gcttggtgag cgggatcagg tccccgggct
     3541 tgagctggag cacttcctcc atgcggaggc tggtgccgcg gatctccgcg gcggcctcca
     3601 tggggcagcg cttgaggctg gccatgagca gccgggcctc ctcgaaggtg gaggacttct
     3661 tgtagcccgt gaacatctcc tggtcgaact tgttggagat gggttcgagg atgatgctgg
     3721 ggatggccag gttgatcatg ccgctgaccg ggcccatctt cacttcgaag accaccagca
     3781 gcaccacctc gttgggagcc acgatctgga tgagctgcgg gctggtctcc cgggcctgga
     3841 tgcggaaatc cagatccacg atgccccgcc atgcctcgcg gaggtcctcc agcaccagct
     3901 tgagcacgcc gtcgaagatg ctctgctcga tgtcggtcat ggtgcgcagc tgcttcaggg
     3961 ggtcgccggg cccgcccagc atcttgtcga tgatggggaa gacgagggtg gggttcactt
     4021 ccagggccag cgcgccttcc agcggcttga tggagatggc attgaagcag gtggggtccg
     4081 gcaccgacag caggaattcc tggtagctga gctgttcgac gctcaccagg ttcacttccg
     4141 tgatggtgcg gaggtaggcg ctgagggagc tggagaagtt gcgggcgaag cggtcgtgca
     4201 tgaagtggag cgaccgcatc tgctcccggc tcacccggtc cgggcggcgg aagttgtaga
     4261 gggtgacttt gcgctggacc tgggcctttt ttgcctgtgg gtggcctccg ccgcgctcct
     4321 gcccctgggc ggacgaggcc ttccccgccg gcttggtgtg ggacttaagt agtgcgtcga
     4381 cttcctcttg gctcaggatc ttggccatgg atcaccctcg aatctgctgc tccaggagct
     4441 tgccccggag ccgcagcatg gccttggtat gcaattggga tacccgggac tcggtgatgt
     4501 tcaggagcgt cccgatttcc ttcatggtca gttcgtcgaa gtagtagagc tggacgacga
     4561 atttctcttt cttgggcagc acctccatgg ctgtccgcag gatctctttg atctccgagg
     4621 cctggaaggt ctggtgcggg tcctcggcgt cgggatcggg cacgaagctg atgaggcttt
     4681 cgccctcgcc gtcctcgccc acctccacga aggtgccgag cgtgacgccc ttcagctcgt
     4741 ccaggttctt gtgcagctcc tcgaggggga tgcccaggtg gacggccacc tcctcatccg
     4801 tggccgcccg ccccatctgc tgttcgaggg agtggtaggc gccctcgatg tccttcttct
     4861 tgcggcggag gctccggggc acccagtcca ggtcccgcag gccgtcgagg atggcgccct
     4921 tgatgcgcag ctcggcatag gtcttgaact tgatgttgcg ggcaggctcg aacttctcga
     4981 tggcgtccat gaggccgaga atgccgctgt tgatgaggtc gtccagctcc acatgggagg
     5041 gcaggcgcga ggcgatgcgg tgggcgacga acttcaccag gggcacgtag tccttgatga
     5101 tctgctcgcg gttgttccgg tcgaagggtt ccgggggctc ggtgctgtcc gtctgggccg
     5161 gggcggccgg agtggaggcc atcggcgtgg ccgagccata ggccttggcc gcggccagag
     5221 cggcccaggg ccggagggcg gcgggggccg cttccacagc tcgaagcgcc tcgccgctga
     5281 gaggctggcc gggatcggcg gtctggtccg gagtcggaga catcctggct cctagggggt
     5341 gtcgtcggaa gcgagatgcc tccagaatgc cgtaaagcca tccggctgca aggacac
//
LOCUS       DASUDT010000107         8301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1706716, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000107 DASUDT010000000
VERSION     DASUDT010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 8301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8301
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706716"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..433)
                     /locus_tag="VFV26_02260"
     CDS             complement(65..433)
                     /locus_tag="VFV26_02260"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4845011.1"
                     /translation="MIRRLSELPEEAKVHIRGGLGAGRGVDLLKAGEMGGVQSMGRIT
                     LDPGATIGEHAHPNTEDLYLILEGRGTGVLNGEHFPVGPGDLFLVKAGGSHGLINDSD
                     APLTFLGLLTRPAETLRLQS"
     gene            complement(430..1212)
                     /locus_tag="VFV26_02265"
     CDS             complement(430..1212)
                     /locus_tag="VFV26_02265"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX4845012.1"
                     /translation="MSTLPGVEAPALPFKPSPVPGGVAVVALPGREAPSRATYRGEPV
                     LVRRAGKGWVAVVGIPLSAKPGQGAVAVDGRAVPFAIRPKRYPEQRVRVEDQRKVTPN
                     AEDEARIAKEQLLIAPAKRARPEGLVAALSFRQPTPGSLSASFGMRRIFNGEPRSPHS
                     GLDIRAPQGQAVQAPAAGVVVLTGDFFFSGNSVFVAHGEGVVSLLCHLSKITVQQGQH
                     VQAGDLIGEVGMTGRASGPHLHWSLGLNNVWVDPRIFFGSAP"
     gene            complement(1266..1712)
                     /locus_tag="VFV26_02270"
     CDS             complement(1266..1712)
                     /locus_tag="VFV26_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845013.1"
                     /translation="MPVAAPSAKLQALLKEFQQVAGMAGYLNHGFDPPQLRLQFTLYG
                     RLRMDTEAAALEAIPRLQAWSEALLLKLREDSAGAILPGQILVAPIQPFQGGGFTVVV
                     NATFTTKVTDSGYFKVKTAVLAAYQEAVRLREAGFPEAAPPLGLPE"
     gene            complement(1983..2855)
                     /gene="mtnP"
                     /locus_tag="VFV26_02275"
     CDS             complement(1983..2855)
                     /gene="mtnP"
                     /locus_tag="VFV26_02275"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX4845014.1"
                     /translation="MNAPIGIIGGSGLYRMEGLVLDRAVAVDTPFGAPSGPVHLGTLD
                     GAPVAFLARHGEGHRFTPSEVNYRANIWALKSVGVERLISVSAVGSLQAWHKPGELRL
                     VGQFIDKTRHREDTFFGGGLVAHVSFAEPTCAQVTKALLAEGRALSLPIEGQALYVCM
                     EGPAFSTRAESRLHQSWGADLIGMTQVTEARLAREAELCYACIALVTDYDAWREEEEG
                     VDAASVLEVMHANVDKAQRLLRQVVPQLSARPRACACGEALKAALYTAPEQVPQEARE
                     RLDLLVAKYGYGTT"
     regulatory      2892..3102
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3177..5201
                     /locus_tag="VFV26_02280"
     CDS             3177..5201
                     /locus_tag="VFV26_02280"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX4845015.1"
                     /translation="MMGSARILFSLAAVSALSLSAEDKRPAEATVTVSAEAQPVEVTR
                     TPAPVRIVEAEELARLGSRTLSELLEVLQPGAVMATGSTGKQASAFLNGTLSRNVVVL
                     LDGLRLNDPTAVSPDLGALSLVGIARVELVLGPSSVLYGSDAIGGVIALTSVGRGPEG
                     FHGQAGLKVGTDGLLGGTAQVQLAGPRGWIAAGAEAQKQESGFPDDAFRQAGGFLRLG
                     TAFGGADLTAFYRNSGQTASVPFTTAGWPAARSYEPQREMRTRQESWGASLRWTLAPG
                     LVLENTLQVLSGSTGDPSGPRRQQTERDFRRLENQLTLHWTPVRTLRLSGRLEGREDT
                     SHARNYYDPATYAAVRYRGEGRDLAGALEARWTLAEGLDWVSGLRRDAGHRDLTRADS
                     GLRSRAGSAEAGTWRTGLNWVIAQELRLYASAGQGFRMPNTTEFTLNAQAEALDGTAY
                     PIRPERSRTIQLGATGQFAGHWEYRLEAQRTRISDLLAYVYDTSYAWPALFTSHYANR
                     GAIRAQSLEGALGWRGGEDVAYGADLILRSQETRDLDHNTGADRFGPQNTAILRHPFF
                     TASLAAFAQSKTWRADARLDRVGPRYDLNDTSYQVTSTRRPYRSLSLGLSHEPVKDLT
                     LALRGDHLLQKRQSVQDWLSGRYDQEGDASLVYGFPAPGPRWTLAATWRW"
     gene            5384..6184
                     /locus_tag="VFV26_02285"
     CDS             5384..6184
                     /locus_tag="VFV26_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4845016.1"
                     /translation="MPLLAARPQRVVSQAVGTDELLLALADPGQIAALSHIARDGRFS
                     AVALEAKRFPAIKDSDAESVLRFRPDLVLAASFTRPETLALLRRAGVRLVVLDRFDTL
                     EDVYASLRLLGRELGQEARAEALIAQCRARVQHLADRLKGVRPVRVLTAGAYPFTAGS
                     GTTFQDLCDHAGALNVAAEAGLKGHAPTPSERILTWNAEALVVTGDRPDGADIRARLA
                     EIPHYRALPAFKAGRFVVIPGALMSSVSHHRIEVYERLARALHPERFR"
     gene            6181..7167
                     /locus_tag="VFV26_02290"
     CDS             6181..7167
                     /locus_tag="VFV26_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX4845017.1"
                     /translation="MSSRLAIPALLALLVLAFLASLAFGELRLSYAQVLSALTGGGDD
                     IARTVVRDFRLPRALVGMAVGAALGASGVVMQAFFRNPLASPGLLGVSSGGALGAVAV
                     LALAPATGFAAATLWALPLASVLGAFAATGAVLMLAQRGAGAERLLLSGVALNALLGA
                     GTSFLLTTTAGHFEVNAQILFWLMGGLESRSWEHVWMGVPAILTACLLLLPLGRAMDL
                     LSLGEESAQSLGVDVRRLRRQLILLSTLLTALATAVAGIVGFVGLVVPHVLRLAFGPD
                     HRRLLPYSMLGGAAFLLACDLVTRTFPLGLRLGVVTALVGGPFFLWLLRRPR"
     gene            7343..8068
                     /locus_tag="VFV26_02295"
     CDS             7343..8068
                     /locus_tag="VFV26_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845018.1"
                     /translation="MTTPALHASTLSVPGRLEAVGLDLGPGELVAVVGPNGAGKSTLI
                     QALAGLLPADGTIHWNGQLLSRIPVSERGRKLAWVGQEAHFEFAFPVREVVAQGRYAW
                     GDDLSGVAEALAELDLTFLADRPATRLSGGERHRVGLARALATQAPIQLWDEPVAQLD
                     VRHALEVMRLARRLTDGGGTVVVSLHDLRAAYRFDRVLVLDRGRLVGNGKPHDVLTAA
                     LIREVFRVEATFVESLVPELPET"
BASE COUNT         1163 a         3086 c         2790 g         1262 t
ORIGIN      
        1 ctcaaaagga tccggacccg gcgcctcccg tgtgcccatg ctcagtgtct ccgtggtgaa
       61 tcctttacga ttgaaggcga agggtttcgg cgggccgcgt cagcaacccc aggaaggtca
      121 gcggcgcatc cgaatcgttg atcagcccgt ggctgccccc ggccttcacc aggaagaggt
      181 cgccgggtcc cacggggaaa tgctcgccat tgaggacgcc cgtgccccgc ccctccagga
      241 tcaggtagag gtcctccgtg ttcgggtggg catgctcgcc gatggtggca ccggggtcca
      301 gcgtgatgcg gcccatgctc tgcacgccgc ccatctcgcc agccttcagg aggtccacgc
      361 cccgtccggc gcccaggccg ccgcggatgt ggaccttcgc ctcttccggc aactcggaca
      421 gcctgcggat catggcgcgc tcccgaagaa gatccgggga tccacccaga cgttgttgag
      481 gcccagggac cagtgcaggt gggggcccga ggcccgcccg gtcatgccca cctcgccgat
      541 gaggtccccc gcctggacgt gctggccctg ctggacggtg atcttcgaca gatggcagag
      601 caggctcacc acgccttcgc catgggccac gaacaccgag ttcccgctga agaagaaatc
      661 cccggtgagc accaccaccc ctgccgcggg ggcctgcacc gcctggccct gcggcgcccg
      721 gatgtccagg cccgaatggg gcgaccgggg ctcaccgttg aagatccggc gcatgccgaa
      781 ggaggcgctg aggctccccg gcgtgggctg gcggaagctc agcgcggcga ctagcccctc
      841 aggccgggcc ctcttggccg gcgcgatgag cagctgctcc ttcgcgatgc gcgcctcgtc
      901 ctcggcgttg ggggtcacct tgcgctggtc ctccacgcgc acccgctgtt cggggtagcg
      961 cttgggccga atggcgaagg gcacggcgcg gccatccacc gccaccgcgc cctggccggg
     1021 cttcgcgctc agcgggatgc ccaccaccgc cacccagccc ttccccgccc ggcgcaccag
     1081 caccggctcg ccgcgatagg tggcccggga cggcgcctcc ctgccgggga gggcgaccac
     1141 cgccacgccg cctggaacgg gcgaaggctt gaaggggagc gccggggctt ccacaccggg
     1201 aagggtggac accgccactc ccagcatcac cgcgggacag gaggcaggac gccatcgaac
     1261 catggtcact ccggaaggcc caggggggga gccgcttcag ggaagcccgc ctcccgcagc
     1321 cgcaccgcct cctggtaggc cgccagcacg gcggtcttca ccttgaagta gccgctgtcg
     1381 gtgaccttgg tggtgaaggt ggcgttcacc accacggtga agccaccgcc ctggaagggc
     1441 tggatggggg cgaccaggat ctggccgggc aggatggcac cggcgctgtc ctcccgcagc
     1501 ttcagcagca gggcttcgga ccaggcctgg aggcgcggga tggcctccag ggccgccgct
     1561 tccgtgtcca tgcggaggcg gccgtagagg gtgaactgga ggcgcagctg cggcggatcg
     1621 aagccgtggt tgaggtagcc cgccatgccc gccacctgct ggaattcctt cagcagggcc
     1681 tggagcttgg cgctgggggc ggcgacgggc attagggtct gctttcaaag tggatgcgag
     1741 ccgcgacggg cccagccgcg tgatccagga aggcggtggc cgcggggcga tgcgggacat
     1801 cgttcaaggc caccaacgca cctgggcgcg cggctggacc cgtcccggag ggcaaggggc
     1861 ggcgcccggc gcgatactgc gtcgaactcc tcgccgatag tgccgctatc gccatcgtcg
     1921 ttctccttgt ctcgcttggg cggcgcccct tgcgcggcca caccccactt tgaaaacaga
     1981 ccctaggttg tcccgtagcc gtacttggcc accagcaggt ccagtcgctc ccgggcctcc
     2041 tgcggcacct gctccggcgc cgtgtagagc gccgccttca gggcctcgcc gcaggcgcag
     2101 gcccgcggcc gggcggacag ctggggcacc acctggcgca gcaggcgctg ggccttgtcc
     2161 acgttggcgt gcatgacctc cagcaccgag gccgcgtcca cgccctcctc ctcttcgcgc
     2221 caggcatcgt agtccgtcac cagggcgatg caggcatagc agagttcggc ctcccgcgcg
     2281 aggcgggcct ccgtcacctg ggtcatgccg atgagatcgg cgccccagct ctggtgcagg
     2341 cggctttcgg cgcgggtgga gaaggccggc ccctccatgc acacgtagag ggcctggccc
     2401 tcgatgggca gggacagggc gcgcccttcg gccaggaggg ccttcgtcac ctgggcgcag
     2461 gtgggttccg cgaagctcac gtgggccacc agcccgccgc cgaaaaaggt gtcctcgcgg
     2521 tggcgggtct tgtcgatgaa ctgccccacg agccgcagct caccgggctt gtgccaggcc
     2581 tggaggctgc ccacggccga cacggagatc agccgctcca cgcccacgga tttgagggcc
     2641 cagatgttgg cgcggtagtt cacttcgctg ggcgtgaagc ggtgcccctc gccatgccgg
     2701 gccaggaagg ccacgggggc gccgtccagg gtgcccaggt gcacgggacc cgagggcgcc
     2761 ccgaagggcg tgtccaccgc caccgcccgg tcgaggacca ggccctccat ccggtagaga
     2821 ccactgccgc cgatgatgcc gatgggtgcg ttcatccgac cattctactt gcgtccggcg
     2881 gcccgtccgt ggttctctga ggccctgaca atttcgtgct ggatgcacgg gaagcaggtg
     2941 tgaatcctgc gctgccccgc aacggtatgc accacgccaa cgcaagcccg gcgtgagacc
     3001 tcaagtccga gtcactggga tcgtcccggg aaggctcgga gggcgccgaa aggttcctgt
     3061 cgcgtgcgag cccggagacc ggtcctgcac ctcacccccc gtcgcgggaa cgggctgggc
     3121 catggtcttc catccctggg gatccgcccg gccgccgcga caccatgcgt ggaggcatga
     3181 tgggttctgc ccgcattctc ttctccctgg cggccgtgtc tgccctttcc ctctcggccg
     3241 aagacaagcg acccgccgag gccacggtca cggtgagcgc cgaggcccaa ccggtggaag
     3301 tcacccgcac cccggcccct gtgcgcatcg tcgaggccga ggagctggcc cgcctgggca
     3361 gccgcacgct ttccgagctg ctggaggtcc tccagcccgg ggccgtcatg gcgacgggca
     3421 gcaccggcaa gcaggcctcg gccttcctca acggcaccct cagccgcaac gtggtggtgc
     3481 tgctggatgg cctgcgcctg aacgacccca cggccgtgag ccccgacctc ggcgccctca
     3541 gcctcgtggg catcgcccgg gtggagctgg tgctgggccc ctcctcggtg ctctacggca
     3601 gcgatgccat cggcggcgtc atcgcgctca ccagcgtggg ccgcggccct gagggcttcc
     3661 atggccaggc gggcctgaag gtcggcaccg acgggctgct cggcggcacc gcccaggtgc
     3721 agctcgccgg tccccggggc tggatcgccg ccggggccga ggcccagaag caggaaagcg
     3781 gtttccccga tgatgccttc cgccaggcgg gtggcttcct gcgcctggga acggccttcg
     3841 gcggtgccga cctgaccgcc ttctaccgca acagcggcca gacggcctcc gtgcccttca
     3901 ccaccgcagg ctggcccgcg gcccgcagct acgaacccca gcgggagatg cgcacgcgcc
     3961 aggagagctg gggcgccagc ctgcgctgga ccctggctcc gggcctcgtg ctggagaaca
     4021 ccctccaggt cctgtccggc agcacgggcg accccagcgg tccccggcgc cagcaaacag
     4081 agcgtgattt ccggcggctg gagaaccagc tcaccttgca ttggacgccg gtccggaccc
     4141 tgcgcctctc cggccgcctc gagggccgcg aagacaccag ccacgcccgg aactactacg
     4201 accccgccac ctacgcagcc gtgcgctacc ggggcgaggg ccgcgacctg gccggagccc
     4261 tggaggcccg ctggaccctc gccgagggcc tcgactgggt gtccggcctg cgccgggatg
     4321 cgggccatcg cgacctcacc cgcgccgatt cgggcctgcg cagccgcgcc ggcagcgccg
     4381 aggcgggcac ctggcgcacg gggctcaact gggtgatcgc ccaggaactg cgcctctacg
     4441 ccagcgccgg gcagggcttc cgcatgccca acaccacgga gttcaccctc aacgcccagg
     4501 cggaggccct ggacggaacg gcctacccca tccgccccga gcgcagccgc accatccagc
     4561 tcggcgccac cggccagttc gcaggccact gggaataccg actggaagcc cagcgcaccc
     4621 gcatcagcga tctgctggcc tacgtctacg acaccagcta tgcctggcca gccctgttca
     4681 cctcccacta cgcgaaccgg ggcgccatcc gcgcccagag cctcgaaggc gccctgggct
     4741 ggcgcggcgg ggaggatgtg gcctacgggg cggacctcat cctgcgcagc caggagaccc
     4801 gggatctgga ccacaacacc ggggccgacc gcttcggccc gcagaacacg gccatcctgc
     4861 ggcacccctt cttcacggcc tccctggcgg ccttcgccca gtcgaagacc tggcgcgccg
     4921 atgcgcgcct cgaccgcgtg ggcccgcgct acgacctgaa cgacaccagc taccaggtga
     4981 ccagcacccg caggccctac cgcagcctga gcctgggcct ctcccacgag cccgtgaagg
     5041 acctcaccct ggccctgcgc ggtgaccacc tgctccagaa gagacagtcg gtccaggatt
     5101 ggctcagcgg ccgctacgat caggagggcg atgccagcct ggtctacggc ttccccgcgc
     5161 ccggcccccg ctggaccctg gccgcaacct ggaggtggtg atggcctgca ttccggaccg
     5221 caaagacaac gatcaccacc aagacaccaa ggcaccaaga aaagataaaa gggcctctgg
     5281 gaggtcggag agcgtgcgtt ccatagctac caccaccctc ggccttcttg gtgttcttgg
     5341 tgccttggtg gtgaaatgtt cccttgtcct gctgatctct ggaatgcccc tcctggcggc
     5401 gcggccgcag cgggtggtga gccaggccgt gggcacggac gaactgctgc tggccctggc
     5461 ggatcccggc cagatcgcgg ccctgagcca catcgcccgg gacggccgct tcagcgccgt
     5521 ggccctggaa gccaagcgtt tccccgccat caaggacagc gatgcggaaa gcgtcctgcg
     5581 cttccggccg gacctggtgc tggccgccag cttcacccgc cccgagaccc tggccctgct
     5641 ccggcgggcc ggggtccggc tggtggtgct ggaccgcttc gacacgctgg aggatgtcta
     5701 cgccagcctc cggctcctgg ggcgcgagtt gggccaggag gcccgggccg aggccctcat
     5761 cgcccagtgc cgcgcccggg tccaacacct ggccgaccgg ctcaagggcg tccgccccgt
     5821 ccgggtgctc accgccgggg cctacccctt caccgccgga tccggcacca ccttccagga
     5881 cctctgcgac cacgccgggg ccctcaacgt ggcggccgag gccgggctca agggccatgc
     5941 gcccacgccc tccgagcgga tcctcacctg gaatgccgag gcgctggtgg tgaccggaga
     6001 ccggcccgac ggcgccgaca tccgcgcgcg cctggcggag atcccccact accgcgccct
     6061 gcccgccttc aaggccgggc gcttcgtggt catccccggg gccctcatgt ccagcgtctc
     6121 ccaccaccgc atcgaggtct acgagcgcct cgcccgggcc ctgcatcccg agcggttccg
     6181 gtgagttccc gcctcgccat ccccgcgctc ctggcgctgc tggtcctggc cttcctggcc
     6241 tcgctggcct tcggggagct gcggctctcc tacgcccagg tgctgtccgc cctgaccggc
     6301 gggggggatg acatcgcccg cacggtggtg cgcgacttcc gcctgccgcg ggccctggtg
     6361 ggcatggccg tgggcgcggc cctgggcgcc agcggcgtgg tcatgcaggc cttcttccgc
     6421 aatcccctgg ccagccccgg cctgctgggc gtgagcagcg gcggcgccct gggggccgtg
     6481 gccgtgctcg ccctggcccc cgccacgggc ttcgccgcgg ccaccctgtg ggccctgccc
     6541 ctggcctcgg tgctcggcgc cttcgcggcc accggcgccg tgctgatgct ggcccagcgg
     6601 ggcgccgggg cggaacggct gctgctctcc ggcgtcgccc tcaacgccct cctgggcgcc
     6661 ggcaccagct tcctgctcac caccaccgcg ggccacttcg aagtgaatgc ccagatcctc
     6721 ttctggctca tgggcggcct ggagagccgc agctgggagc acgtgtggat gggcgtgccc
     6781 gccatcctca ccgcctgcct gctgctgctg cccctgggcc gggccatgga cctgttgagc
     6841 ctgggggagg agagcgccca aagcctgggc gtcgatgtgc gacgcctccg acgccagctg
     6901 atcctcctgt ccaccctgct cacggccctg gccacggcgg tcgccggcat cgtcggcttc
     6961 gtgggcctgg tggtgcccca cgtgctgcgc ctggccttcg gccccgacca ccggcgcctg
     7021 ctgccctatt ccatgctggg cggcgccgcc ttcctcctcg cctgcgacct cgtcacccgc
     7081 accttccccc tgggcctgcg gctgggcgtc gtcaccgccc tcgtgggcgg ccccttcttc
     7141 ctgtggctgc tgcggaggcc gcggtgagat cagtctggag accggagacc ggagaccgga
     7201 ggtacgcctc ggcatttcga tcgtgcatgc caagccttga agaattgcac gagccccata
     7261 cgaaaatctg gcgcggccag attggccgca tcccttcacc cctccagacc ccggactcca
     7321 gactccggac ggagaccggg tcatgaccac gcccgccctc cacgcctcca ccctctcggt
     7381 ccccggccgc ctggaggccg tgggcctgga cctcggtccc ggtgaactcg tggccgtggt
     7441 gggacccaac ggggcgggca agtccaccct gatccaggcc ctcgcaggtc ttctaccggc
     7501 tgatgggacc atccattgga atggacagct tctgtcgcga atccccgtgt cggagcgggg
     7561 ccgcaagctc gcctgggtgg gccaggaggc gcatttcgag ttcgccttcc ccgtgcgtga
     7621 ggtggtggcc cagggccgct atgcctgggg cgacgacctc tcgggtgtgg ccgaggccct
     7681 ggcggagctg gacctcacct ttctcgcgga ccggcccgcc acgcggctgt ccggcggcga
     7741 gcgccaccgc gtgggcctgg cgcgggccct ggccacccag gcccccatcc agctctggga
     7801 cgagcccgtg gcccagctcg acgtgcgcca tgccctggag gtgatgcgcc tggcccgccg
     7861 cctgacggac ggaggtggca ccgtggtggt gagcctccac gacctgcgcg ccgcctaccg
     7921 cttcgaccgc gtgctggtgc tggaccgggg ccgcctcgtg ggcaacggga agccccatga
     7981 tgtcctcacc gccgcgctga tccgcgaggt cttccgcgtg gaggccacct tcgtggagag
     8041 cctggtgccg gaattaccgg agacgtgagt tcccggcggg tggccactcc ttcgatatga
     8101 cccggatacc ccttcaaagt gatgggttgc acccgtgttt tcaattttcc atttaaatct
     8161 aaattgttta ttaatttata agttatttac tggcctggaa cctgctgtgt ttgggtcgcg
     8221 aaccctttac ggccaagcca gcggcgtata ggaacggctg atcccatgtg cctaggttgc
     8281 cgctcgtttc tccggtctcc c
//
LOCUS       DASUDT010000108         2357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1618403, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000108 DASUDT010000000
VERSION     DASUDT010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618403"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1633
                     /locus_tag="VFV26_02300"
     CDS             <1..1633
                     /locus_tag="VFV26_02300"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845019.1"
                     /translation="LTRARRAREGGRMDEALHAYGLMLAQVASHETALLERAETLAWA
                     GRYREAAEAYRAFRKVHPGRALDADLRLAQLAAWQNRTGEALDLLEGWLKQEHRQAVL
                     DAATYLSWGGRMPESLRRLRSWLEKHPEDREARLLEAKILGWDGQFAEARAAYGKVLA
                     GTPSDREALAGLARLDLWEGSPGRAHGALDRMAVDDRNHPESQLLRAQVDLAEGASRS
                     ARARTSALAAKPGPSQKEARELLEDLTGALGPWVELSAARTDTNEGLRLEDPLFRARV
                     PIGDGALDLGAGLHRTSFQGLVRSTRETSLGITHPIGPRWRASASVSRLSDLAGEPAW
                     GHTFGLGLSPAAGLDLRLDHSRSLAIFTPAALAQRTAFSSTDLGAAWRFGRGRHALGA
                     GLGHADVSAGSTRRSFFGSYEYRVPVTGFDLRVGALTRGFGYSRSLPLGFFNPERYRW
                     NGATGSLAWRQGRVFEAALNVRTGYQTVNQGRAQFTWSYGAALGWNPRSAPVSLFASW
                     SHSMAGLPVTDPTDPADYREHTLRVGLRLRGDRWF"
     gene            1658..2062
                     /locus_tag="VFV26_02305"
     CDS             1658..2062
                     /locus_tag="VFV26_02305"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845020.1"
                     /translation="MSRLWPESTKVLVVEDDPSTARIIQARLEMEGLQVFVAFNGAEG
                     LEILHREAIDLITTDLMMPAMNGFRLVQEVRDLPPPKGRVPILLISSNQNEQDMVRCL
                     AAGADDYVTKPISVQVLVERLWRLFERSRRAG"
     gene            2090..>2357
                     /locus_tag="VFV26_02310"
     CDS             2090..>2357
                     /locus_tag="VFV26_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845021.1"
                     /translation="MLPALHWATAILAGLLGALVLAGAFMQVSRDRQNRHRIACYQDW
                     ETRLTDFLFKGTHEHGSFGTVPRADHWLFRDFLSRYQSTFAGLEA"
BASE COUNT          329 a          880 c          783 g          365 t
ORIGIN      
        1 gttgacccgc gcccgccggg cccgcgaagg gggccggatg gacgaggcgc tccatgcgta
       61 cggcctcatg ctcgcccagg tggcctccca cgagacggcc ctgctggagc gggcggagac
      121 gctggcctgg gcgggacgct accgcgaggc cgccgaggcc taccgggcct tccggaaggt
      181 ccatcccggg cgggccctgg atgcggacct gcggctcgcc caattggcgg cctggcagaa
      241 caggaccggc gaggccctcg acctcctgga aggctggctc aaacaggaac accgccaggc
      301 ggtcctcgac gctgcgacct acctgagctg gggcggccgg atgcccgaaa gcctccgccg
      361 gctgcggtcc tggctggaga agcacccgga ggaccgggag gcccgtctcc tggaggccaa
      421 gatcctgggc tgggatggcc agttcgccga ggcccgcgcc gcctacggga aagtgctggc
      481 cgggacgccg tccgaccgcg aggccctggc gggccttgcc cgcctcgacc tgtgggaggg
      541 cagccctggc cgggcccacg gggccctgga ccgcatggcc gtcgacgacc ggaaccatcc
      601 cgaatcccag ctgctccggg cccaggtcga tctggccgag ggcgcctccc ggtcagcccg
      661 ggcgaggacc tcggccctcg ccgccaagcc gggcccttcg cagaaggagg cccgtgagct
      721 gctggaggac ctgaccgggg ccctgggtcc ctgggtggag ctgtccgccg cccgcaccga
      781 taccaacgag ggcctgcggc tggaggatcc cctgttccgc gcccgggttc ccatcgggga
      841 cggcgcactg gaccttgggg ccggcctgca ccggaccagc ttccagggcc ttgtccgcag
      901 cacccgcgaa accagcctgg gcatcaccca tcccatcggg ccccgctggc gggcatccgc
      961 atccgtgtcc cgcctgtcgg atctcgccgg cgaacccgcc tggggccaca ccttcggcct
     1021 gggcctgtcg cccgcggcgg gcctggatct ccggctggac cattcccgca gcctggccat
     1081 cttcaccccc gcggccctgg cccagcgcac ggccttctcc tccaccgact taggcgccgc
     1141 ctggcgcttc ggccggggcc gccatgccct cggcgcgggc ctcggccacg cggacgtctc
     1201 cgccggttcc acccgccgca gcttcttcgg gtcgtacgag taccgggtgc ctgtcaccgg
     1261 gttcgacctc cgggtgggcg cgctgacccg ggggttcggc tattccaggt cccttccctt
     1321 gggcttcttc aacccggagc gctaccggtg gaacggagcc acgggcagcc tcgcctggcg
     1381 ccaggggcgc gtcttcgaag cggctttgaa cgtccgcacc ggatatcaga cggtgaacca
     1441 gggccgggcc cagttcacct ggagctatgg tgcagccctg ggctggaacc cccgctccgc
     1501 ccccgtctcg ctgttcgcat cctggtccca cagcatggcg ggcctccccg tgaccgaccc
     1561 caccgaccct gcggactatc gggaacacac cctccgcgtg ggtttgcggc tccgcggcga
     1621 tcgctggttt tgacaaaaag gtggatagac tttttccatg agccgtctat ggcctgaatc
     1681 caccaaggtc ctcgtggttg aggatgatcc gtccactgcc cggatcatcc aggcgcgcct
     1741 ggaaatggaa gggctgcagg tgttcgtggc tttcaatggg gcggaggggc tcgagatcct
     1801 ccaccgggaa gccatcgacc tgatcaccac ggacctcatg atgccggcca tgaacggctt
     1861 ccggctggtg caggaggtcc gggacctccc gccgcccaag gggcgcgttc ccatcctgct
     1921 catctccagc aaccagaatg agcaggacat ggtccgctgc ctggccgccg gtgctgacga
     1981 ctacgttacc aagcccattt cagtgcaggt gctggtggaa cggctgtggc ggctcttcga
     2041 gcggtcccgc cgggcggggt gacacatcct ccccctgtcc caggaaatca tgctccccgc
     2101 cctgcactgg gccaccgcca tcctggccgg cctcctcgga gccctggtcc tggccggcgc
     2161 cttcatgcag gtgagccgcg accgccagaa ccggcaccgc atcgcctgct accaggactg
     2221 ggagacccgg ctgacggact tcctcttcaa gggcacccac gaacacggat ccttcgggac
     2281 cgttccccgc gccgaccact ggctcttccg ggatttcctg tcccgctacc agtccacctt
     2341 cgccgggctg gaagcgg
//
LOCUS       DASUDT010000109         2120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2126618, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000109 DASUDT010000000
VERSION     DASUDT010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2126618"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1077)
                     /locus_tag="VFV26_02315"
     CDS             complement(<1..1077)
                     /locus_tag="VFV26_02315"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4845022.1"
                     /translation="MNHVLRFSLLSLALAGAVACRPKAEAPAPPDAHHHEGEVHEGEA
                     AHLSLKEVRGLRFLVVPEPRAEGAWYPAEAIGDESAQAQVSSSVKGIVSAILVPPGRP
                     VRAGEGLLTLQSPELARLKADWLSARARRGRAESELAREQRLFEAQAGSRRELEAAHS
                     EAATARAEEDAARLALEARGLNPEAAGAVMTVRAPKAGSVTAYRVQLGQGVEAGQELG
                     SFQAAAASIARLELPQPAPENWLPGAVTEVRKGNGQRWRARLESVPATLTPDTRRLSY
                     RLRLLGGALPIPGTPLEVHVPLAKTVVLPQSALQQVEGTWGVFVKEGEEAEFRPVRRG
                     PELGTDVMVMAGVKPGETVVGEGAY"
     gene            complement(1074..>2120)
                     /locus_tag="VFV26_02320"
     CDS             complement(1074..>2120)
                     /locus_tag="VFV26_02320"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4845023.1"
                     /translation="QRHQALAGTRGLLREGPALGLSAGPRTHPGSPSTTDQSVELDLP
                     LFLAPGTRRRLEASLGHADPLLREAARIEARMRLRQAYLDAWLAERLLQLREADLATV
                     QTWLRAAQARLEAGADPGYQVSLVEGEVLRAQADLDEAHRQRLNVWAGLRALAEVPAR
                     PVPLADPGSPPVLEGQGLQAQFEAGALRRALQSQLDLEQQASRHQEALAASRWSLRGS
                     YGKEGEERIGKVGLAYRFSRPGEARAVQREIGAALQATRRELEAALLELDARFQSAWS
                     RLQTAAPPRPFAGFELSLNAISLRLREGKERPSEALPIRRQLLEAQASSYRRLHAAHL
                     LSAELQALTSGVTP"
BASE COUNT          268 a          775 c          801 g          276 t
ORIGIN      
        1 gtaggcgccc tcgcccacca cggtctcgcc gggcttcaca cctgccatca ccatcacatc
       61 ggtgcccagc tcagggcccc ggcgcacggg gcggaattcc gcctcctccc cctccttcac
      121 gaagacgccc caggtgcctt ccacctgctg cagggcgctc tggggaagga cgactgtctt
      181 cgccagcggc acatggactt ccaggggcgt gcccgggatg ggcagggcgc cgcccagcag
      241 gcgcaggcgg tagctcaacc gccgggtgtc cggggtgagc gtcgcgggga cgctctccag
      301 ccgggcccgc caccgctggc cgttgccctt gcggacctcg gtgacggcgc cgggaagcca
      361 gttctccggg gcgggctggg gcagttccag ccgggcgatg gacgcggccg cagcctggaa
      421 gctgcccagc tcctggcccg cctccacgcc ctggccaagc tgcacccggt aggccgtgac
      481 cgagcccgcc ttcggggccc tcacggtcat caccgcgcca gcggcctcgg ggttcaggcc
      541 ccgggcctcc agcgcgagtc tggcggcatc ctcctccgcc cgggccgtgg cggcctcgct
      601 gtgggcggcc tccagctcgc gccgggatcc ggcctgggcc tcgaaaagcc gctgctcccg
      661 ggccagctcg gattccgccc ggccccgccg ggcccgggcg gacagccagt cggccttgag
      721 gcgggccagt tccgggctct ggagggtgag cagcccttcc ccggccctga caggccgccc
      781 cgggggaacc aggatcgccg agacgatgcc cttcaccgag ctgctgacct gggcctgggc
      841 ggattcgtcg ccgatggcct cggcgggata ccaggcaccc tcggccctcg gctccgggac
      901 caccaggaag cggagcccgc ggacctcctt cagggagagg tgggcggcct ctccttcgtg
      961 gacctccccc tcatggtggt gggcatccgg cggagcaggc gcttcggcct tgggccggca
     1021 ggccacggct cccgccaggg caaggctcag cagggaaaaa cgaaggacat ggttcatgga
     1081 gtcaccccgg aggtgagggc ctggagttcg gcagacagga gatgggcggc atggaggcgg
     1141 cggtaggacg aagcctgggc ctccagcagc tggcggcgga tggggagggc ttcggaaggg
     1201 cgctccttcc cttcgcggag gcgcaggctg atggcgttga gggacaactc gaagcccgcg
     1261 aagggccgag gcggcgcggc ggtctggagc ctggaccagg cggactggaa gcgggcgtcc
     1321 aattccagca gggcggcctc cagctcgcgc ctggtggcct ggagggcggc cccgatctcc
     1381 cgctggacgg cccgggcctc tcccggacgg gagaaccggt aggcgaggcc gaccttgccg
     1441 atccgctcct cgccctcctt gccgtagctg ccccggaggc tccaccggct ggcggccagc
     1501 gcctcctggt ggcgcgacgc ctgctgctcc aggtccagct ggctctggag cgccctgcgc
     1561 agggcgccgg cctcgaactg ggcctggagg ccctgccctt ccaggaccgg cgggctgccg
     1621 ggatcggcca gcgggaccgg tcttgcgggg acctccgcca gcgcgcggag ccccgcccag
     1681 acgttcaggc gctgccggtg ggcctcgtcc agatcggcct gggcccggag cacttcgccc
     1741 tcgacgaggc tcacctggta accgggatcc gccccggcct ccaggcgcgc ctgggcggcc
     1801 ctgagccagg tctggaccgt ggccaggtcc gcctcgcgaa gctggagcag gcgttcggcc
     1861 agccaggcgt ccaggtaggc ctggcgcagg cgcatccggg cctcgatgcg ggcggcctcc
     1921 cgcagcagcg ggtccgcgtg gcccagggac gcctccaggc ggcgccgggt gccgggcgcc
     1981 aggaacaggg gcaggtccag ttccacggac tgatccgtgg tcgaagggga accgggatgg
     2041 gtgcgcgggc cggcggacag gccgagggcc ggaccttccc ggagcaggcc gcgggtgccc
     2101 gccagggcct ggtggcgctg
//
LOCUS       DASUDT010000110         2468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1198898, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000110 DASUDT010000000
VERSION     DASUDT010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1198898"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1800)
                     /locus_tag="VFV26_02325"
     CDS             complement(<1..1800)
                     /locus_tag="VFV26_02325"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX4845024.1"
                     /translation="MREMDKAFDFRTAQTRWYSVWEDARAFEAAPQSGKEPWSIVIPP
                     PNITGNLHMGHALVNTLHDVLTRFKRAQGFDALWVPGTDHAGIATQMMVERQLKAEGT
                     DRHQLGRDAFEKRIWDWKAKNQGAIEHQLKRLGCSVDWTRNRFTLDPALNKAVRKVFV
                     ESYKAGRIYRGPRMIQWDPALQTALSDLEVKYEERRGKLWHLRYPLADGSGDVVVATT
                     RPETMLGDTAVAVHPDDERYQGMIGKLMNHPLTGRQIPVVADSFVDPAFGTGCVKVTP
                     AHDPNDFAAGQRLKLESITILGFDAKMTAAAGAYAGLDRFEARKRVVADLEEQGFLVK
                     VEDYTHKISLSDRSGAVLEPLVSEQWFMDVKEAAAKALEAVNSGAIQFTPEHHTAVWN
                     HWLTNIQDWCISRQLVWGHRIPAWTCATCGELHVEMEAPSACCACGAGELIQDPDTLD
                     TWFSSALWPFSVFGWPDESAELKRYYPTSVLITGYDILFFWVARMAMAGLTWMGEVPF
                     RKVYFNSLVRDASGQKMSKTKGNVIDPLEVMEEYGTDALRFSLAIMAAPGTDIAMSTA
                     RLEASRNFCNKLWNASRFVQINLGEDITLSTDAE"
     gene            2004..2351
                     /locus_tag="VFV26_02330"
     CDS             2004..2351
                     /locus_tag="VFV26_02330"
                     /inference="COORDINATES: protein motif:HMM:NF025890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4845025.1"
                     /translation="MRLLRIVALGLAGLLAFGVCAGEDKPLPAPHAKAKVNCHDCHHK
                     EKPSTAAVPDEACMVCHGDYPAMKALTKDAKPNPHGSPHDPIPCTDCHRQHKPPVVKC
                     LECHEGKFTFKIK"
BASE COUNT          392 a          779 c          832 g          465 t
ORIGIN      
        1 ttctgcatca gtggacagcg tgatgtcctc tccgagattt atctgcacga accgtgatgc
       61 gttccagagc ttgttgcaga agttgcggct ggcctcgagc cgcgcggtgc tcatggcgat
      121 gtccgtgccc ggggcggcca tgatggccag ggagaagcgc agcgcgtccg tgccgtactc
      181 ctccatgact tcgaggggat cgatgacgtt gcccttggtc ttgctcatct tctggccgct
      241 ggcgtcgcgg accaggctgt tgaagtagac cttgcggaag ggcacctcgc ccatccacgt
      301 gaggcccgcc atggccatgc gcgccaccca gaagaacagg atgtcgtagc ccgtgatgag
      361 cacgctggtg gggtagtagc gcttgagttc ggcggactca tcgggccagc cgaacacgct
      421 gaagggccac agcgctgatg agaaccacgt atccaacgtg tccggatcct gaatcagttc
      481 ccctgctccg catgcgcagc atgcggaggg ggcctccatc tcgacgtgaa gctccccgca
      541 cgtcgcgcag gtccaggcgg ggatgcgatg gccccagacc agctggcggc tgatgcacca
      601 gtcctggatg ttggtgagcc agtggttcca cacggccgtg tggtgctcgg gtgtgaactg
      661 gatggcgccg gaattcacgg cctccagggc cttggcggcg gcctccttca cgtccatgaa
      721 ccactgctcg ctgaccagcg gctccagcac ggcaccgctg cggtcgctga ggctgatctt
      781 gtgggtgtag tcctccacct tcaccaggaa gccctgctcc tcgagatcgg ccaccacgcg
      841 cttgcgggcc tcgaagcggt ccaggcccgc gtaggccccg gcggcggcgg tcatcttcgc
      901 gtcgaagccg aggatggtga tggattccag cttcaggcgc tggcctgcgg cgaagtcgtt
      961 ggggtcgtgg gccggcgtca ccttcacgca gccggtgccg aaggcggggt ccacgaagct
     1021 gtcggccacc acggggatct gacggcccgt gagcgggtgg ttcatgagct tgccgatcat
     1081 gccctggtag cgttcgtcgt ccggatgcac cgccacggcc gtatcgccca gcatggtctc
     1141 ggggcgggtg gtggcgacga ccacatcgcc gctgccgtcc gccagggggt agcgcaggtg
     1201 ccagagcttg ccgcggcgct cctcgtattt cacttccaga tcgctcagcg ccgtctgcag
     1261 cgcggggtcc cactggatca tgcgcgggcc gcggtagatg cgcccggcct tgtagctctc
     1321 cacgaagacc ttgcgcacgg ccttgttgag ggccgggtcc agggtgaagc ggttgcgggt
     1381 ccagtccacg gagcagccca ggcgcttgag ctggtgctca atggcgccct ggttcttggc
     1441 cttccagtcc cagatgcgct tttcaaacgc atcgcggccc agctggtggc ggtccgtgcc
     1501 ttcggccttg agctggcgtt ccaccatcat ctgggtggcg atgccggcgt gatccgtgcc
     1561 cggcacccag agagcgtcga agccctgggc ccgcttgaag cgcgtcagca cgtcatgcag
     1621 cgtgttcacc agggcgtggc ccatgtgcag gttgcccgtg atgttggggg gcgggatgac
     1681 gatggaccag ggctccttgc cgctctgggg ggcggcctcg aaggccctgg cgtcctccca
     1741 tacggagtac caacgcgtct gcgcggtcct gaagtcgaaa gccttgtcca tctcgcgcat
     1801 tgccatcctt gtcttggcct ttcctggctc caaatcggcg tgggcgattt ggagcgggtg
     1861 aacgggactt cacaggatca gccagcccaa tggatcagtt tacctgtgga gggacgagcc
     1921 ttccagaagg ccggatggcg cgaccggaaa gtaatgcgat agcatggtcg tcattagtct
     1981 gggactgggg acaaggaggg cacatgcggc ttcttcggat cgtggctctg gggctggcgg
     2041 gtctgctggc gtttggggtt tgcgcgggtg aagacaagcc cctgccggcg ccccatgcca
     2101 aggccaaggt gaactgccat gactgccacc acaaggagaa gccctccacg gcggcggtgc
     2161 cggacgaggc ctgcatggtc tgccatggcg actaccccgc catgaaggcg ctgacgaagg
     2221 atgccaagcc caatccccat ggctcgccgc acgaccccat cccctgcacg gactgccacc
     2281 gccagcacaa gcccccggtg gtgaaatgcc tggaatgcca cgaggggaag ttcaccttca
     2341 agatcaagtg agggtcccgt gatgagagga tggaagggtc tattgagcga ggccccatgc
     2401 tctcccgatc ccttctgctc tcttcggccc tgatcctcgg tccggttccg gccatggcgg
     2461 gagccctg
//
LOCUS       DASUDT010000111         6281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_911650, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000111 DASUDT010000000
VERSION     DASUDT010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6281
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911650"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..3452
                     /locus_tag="VFV26_02335"
     CDS             45..3452
                     /locus_tag="VFV26_02335"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEX4845026.1"
                     /translation="MKISRHFTKAGHDPLEGIPFVPRTSRITKLDGTVVFEAKDVLVP
                     ESWSQVAVDILAQKYFRRKGIDAQNGGEKDARQVFHRLAGCWRHWGETHGYFDSAEDA
                     QAFYDELTYMLAGQMCAPNSPQWFNTGLHYAYGISGPAQGHSYVDPKTGEMTKSTSAY
                     ERPQPHACFIQSVADDLVNEGGIMDLWTREARIFKYGSGTGTNFSKVRGSEEPLSGGG
                     RSSGLMSFLAVGDRAAGAIKSGGTTRRAAKMVCLDLDHPDIEAFIDWKVTEERKVAML
                     AAGSAVLRRHWDAICKTVEGSTSRDADPATNEALRKALARAKREGAPAAFLTQCLGRL
                     VEGDFERDLAGYDTSWDGEAYATVSGMNSNNSVRVPDAFMRALEVDGDWELKRRIDGK
                     TSRKLRAKDLWGKVNAAAWACADPGIQFNTTINDWHTCPADGPINASNPCSEYMFLDD
                     TACNLASLNLCTFLTGDGGFDLAGYRHAIRLWTVVLEISVLMAQFPSENIAQLSYDFR
                     TLGLGYANLGAMLMRMGIPYDSAEGTQWCATLTAILTGDAYAASAEMSRELGPFPGYA
                     KNADHMLRVVRNHRRAAYNAPASEYEQLSIRPQGLTGTGVPKRIVDAARESWDTALTY
                     GEQWGYRNAQVTVLAPTGTIGLLMDCDTTGVEPDFALVKFKKLAGGGYFKLVNGAIPE
                     ALARLGYAPAQIHEIERHVVGWQQITDETPGITRTMLKGAGWAEEEIASVEQKLPTAF
                     DPAYAIDVERLKRDFSAEQVERFLLALSGTMTVEGAPHLKDEHLPIFDCANRCGRTGK
                     RYIAPMGHLRMMGAAQPFLSGAISKTINLPAEATVDEIGKIYEASWQLMLKAVALYRD
                     GSKMSQAMATSLDSLVGAEALLDESATAAEKTPALAQALTQQLVRTYRRRLPNRRGGY
                     TQAATIGGTKLYLRTGEYEDGSLGEIFLDIHKEGAAFRAVLNCFAIAVSMGLQHGVPL
                     EEFCDAFLFTRFEPGGMVAGSDTIKLSTSLIDFVFRELAISYLGRYDLAHVEPEQLMN
                     SATGLRPGSQAPGLAANLPSLPTGTPLPFPEAGAPEAVGAPSAPAPVQPALQPVTVGA
                     RSAVSAAQVAREKGYTGDPCPECGHLTLVRNGACMKCQTCGATTGCS"
     gene            4010..4456
                     /locus_tag="VFV26_02340"
     CDS             4010..4456
                     /locus_tag="VFV26_02340"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX4845027.1"
                     /translation="MATHTIRLHRVVRATPERVYRAFLDADAMVKWLPPHGFTGRVHH
                     LEAKVGGTYRMSFTNFSTGHSHSFGGAYLELVPHERIRHTDTFDDPNLPGEMQTTISL
                     KQVSCGTELDIVQEGIPAVIPPEACHLGWQESLTLLAQLVEADIPA"
     gene            4522..5286
                     /locus_tag="VFV26_02345"
     CDS             4522..5286
                     /locus_tag="VFV26_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4845028.1"
                     /translation="MPDLLDPASLDLAADPELGPLLAACPDIAPLRFRDGECLVTEGE
                     DSQDVFIVRKGSLVVEKTLPDGTARPLAQIECSAASPAIIGEMAYFGALRRTATVRAV
                     GACQALHLKPAHLDAIMAGFPGLTRILCRQFTARLKEANEELRDLRARFHLAPERRMA
                     QAGEVIFAAGTPADAVFQLAMGSVRFDGPDGSKVLRAEDLPGGFLGLEAYLRQRPHGA
                     TATAEEACFLAVIGAGHREAFLRSHPALALNLLERP"
     gene            complement(5283..>6281)
                     /locus_tag="VFV26_02350"
     CDS             complement(5283..>6281)
                     /locus_tag="VFV26_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845029.1"
                     /translation="LAMQDPRDGAWYAALDHGHFGAKLHRSRDRGATWEEIGVPAYPA
                     PPEGHVEKDFIGREIPWRLMRFWCLTPGLASQPGLLWAGTIPGGLFWSEDSGATWHLV
                     ESLWHHPDRRKWMGGGADAPGIHSICVDPRDGNRVVVAVSSGGVWHTRDCGKTWTAHT
                     QGMRADYAPPELVEAPESQDPHRMVQCPAAPHVWWIQHHNGIFRSTDDAMTWTEITDV
                     QPSVFGFPVVVHPEDPDTAWFVPAIKDERRIPSEGRVVVNRTRDGGRTFEILDRGLPQ
                     AWAYDLVYRHALDLDASGERLAFGSTTGSVWISENAGDDWITLAEHLPPVHAVLFV"
BASE COUNT         1046 a         2321 c         1987 g          927 t
ORIGIN      
        1 agggtttgcc ctcgccgcgg cttcgcatcc ccgcgaggtc ctcgatgaag atttcccgcc
       61 acttcaccaa ggccggccac gacccgctcg agggcatccc cttcgtgccg cgcaccagcc
      121 gcatcaccaa gctggatggg accgtggtct tcgaggccaa ggacgtgctg gtgccggaga
      181 gctggtccca ggtggcggtg gacatcctgg cccagaagta cttccgccgg aagggcatcg
      241 acgcccagaa cggcggagag aaggacgcgc ggcaggtgtt ccaccgcctg gcgggctgct
      301 ggcggcactg gggtgagacc cacggctact tcgattcggc ggaggacgcc caggccttct
      361 acgacgagct gacctacatg ctcgcgggcc agatgtgcgc gcccaactcg ccccagtggt
      421 tcaacacggg cctgcactac gcctacggca tctcgggccc ggcccagggc cacagctatg
      481 tggatcccaa gaccggcgag atgacgaagt ccacctcggc ctacgagcgc ccgcagcccc
      541 acgcctgctt catccagagc gtggctgacg acctcgtgaa cgagggcggc atcatggacc
      601 tgtggacccg cgaggcccgc atcttcaagt acggctcggg cacgggcacc aacttctcca
      661 aggtccgcgg ctccgaggaa cccctctccg gcggcggccg cagctcgggc ctcatgagct
      721 tcctggccgt gggcgaccgc gccgccggcg ccatcaagag cggcggcacc acccgccgcg
      781 ccgccaagat ggtctgcctc gacctggacc accccgacat cgaagccttc atcgactgga
      841 aggtgacgga ggaacggaag gtcgccatgc tggccgccgg cagcgcggtc ctgcgccgcc
      901 actgggatgc catctgcaag accgtggagg gttccaccag ccgggacgcc gatcccgcca
      961 ccaatgaggc cctgcgcaag gccctcgccc gcgccaagcg cgaaggcgcc cccgcggcct
     1021 tcctcaccca gtgcctgggc cgcctggtcg agggcgattt cgagcgcgac ctcgcaggct
     1081 acgacacctc ctgggatggc gaagcctacg ccaccgtgag cggcatgaac tccaacaact
     1141 ccgtccgcgt gcccgacgcc ttcatgcgcg ccctggaggt cgacggcgac tgggagctga
     1201 agcgccgcat cgacggcaag accagccgga agctgcgcgc caaggacctc tggggcaagg
     1261 tgaacgccgc ggcctgggcc tgcgccgacc ccggcatcca attcaacacc accatcaacg
     1321 actggcacac ctgccctgcc gacggcccca tcaacgcgag caacccctgc tccgagtaca
     1381 tgttcctgga cgacaccgcc tgcaacctgg cgtccctgaa cctgtgcacc ttcctcaccg
     1441 gcgacggcgg cttcgacctg gcgggctacc gccatgccat ccgcctctgg accgtggtgc
     1501 tggaaatcag cgtgctcatg gcccagttcc ccagcgagaa catcgcccag ctgagctacg
     1561 acttccgcac cctgggcctg ggctacgcca acctgggcgc catgctcatg cgcatgggca
     1621 tcccctatga cagcgccgag ggcacccagt ggtgcgccac cctcacggcc atcctcacgg
     1681 gcgacgccta cgccgccagc gccgagatgt cccgcgagct gggccccttc ccgggctacg
     1741 cgaagaacgc ggaccacatg ctgcgggtcg tccgcaacca ccgccgcgcc gcctacaacg
     1801 cccccgcctc cgagtacgag cagctctcca tccgccccca gggcctcacc ggcaccggcg
     1861 tgcccaagcg catcgtggac gccgcccggg aaagctggga cacggccctc acctacggcg
     1921 agcagtgggg ctaccgcaac gcccaggtga cggtgctggc gcccacgggc accatcggcc
     1981 tgctcatgga ctgcgacacc accggcgtcg agcccgactt cgccctggtg aagttcaaga
     2041 aactggcggg cggcggctac ttcaagctgg tgaacggcgc catccccgag gccctggcgc
     2101 ggctcggcta cgcccccgcg cagatccacg agatcgaacg ccacgtggtg ggctggcagc
     2161 agatcaccga cgagaccccc ggcatcaccc gcaccatgct gaagggcgcg ggctgggccg
     2221 aggaggagat cgcctccgtg gagcagaagc tccccacggc cttcgatccc gcctacgcca
     2281 tcgacgtgga gcggctgaag agggacttca gcgccgagca ggtggagcgc ttcctcctgg
     2341 ccctgagcgg caccatgacc gtggaaggcg ccccccacct caaggacgag cacctgccca
     2401 tcttcgactg cgccaaccgc tgcggccgca cgggcaagcg ctacatcgcc cccatgggcc
     2461 acctgcgcat gatgggcgcc gcccagccct tcctcagcgg cgccatcagc aagaccatca
     2521 acctgcccgc ggaagccacc gtcgacgaga tcgggaagat ctacgaggcc agctggcagc
     2581 tcatgctcaa ggccgtggcc ctctaccgcg acggctcgaa gatgagccag gccatggcca
     2641 ccagcctgga cagcctggtg ggcgccgagg ccctgctgga cgaatccgcc accgccgcgg
     2701 agaagacccc cgcgctggcc caggccctca cccagcagct ggtgcgcacc taccgccgcc
     2761 gcctgccgaa ccgccggggc ggctacaccc aggccgccac catcggcggc accaagctct
     2821 acctccgcac cggcgaatac gaggacggca gcctcggcga gatcttcctc gacatccaca
     2881 aggagggcgc cgccttccgc gccgtgctca actgcttcgc catcgccgtg agcatgggcc
     2941 tccagcacgg cgtgccgctt gaggaattct gcgacgcctt cctcttcacc cgcttcgagc
     3001 ccggcggcat ggtggccggc agcgacacca tcaagctgag caccagcctc atcgacttcg
     3061 tgttccgcga actggccatc agctacctgg gccgctacga cctggcccac gtggaacccg
     3121 agcagctcat gaacagcgcc acgggcctgc gccccggcag ccaggccccc ggcctcgccg
     3181 ccaacctgcc cagcctgccc acgggcacgc ccctgccctt ccccgaggcc ggcgctcccg
     3241 aagccgtggg tgccccttcc gccccggccc cggtgcagcc cgccctccag cccgtcaccg
     3301 tgggcgcccg cagcgccgtc agcgccgccc aggtggcccg cgaaaagggc tacaccggcg
     3361 acccctgccc cgagtgcggc cacctcacct tggtccgcaa cggcgcctgc atgaagtgcc
     3421 agacctgcgg ggccaccacg gggtgcagct agaaagagat ccaccacaaa gacacgaagt
     3481 cacgaagtca cgaagtcacg aagtcacgaa gaggaatagg cgtggggtca agcacccatg
     3541 tgccctttgt gttctttgtg gctagaaccc ttcttcctcc cttgtggtag tcgccgcgct
     3601 cgtatccgag cggagaggta actccagcca aaaaccggaa ataagcggag gatagcggag
     3661 gggcggagga gagcagagaa ggacacagca gtttttttac ttttctccgc tttccttagc
     3721 tactcagttc tcctccgctt attgatatct ttttcaaccc agcaaaccca gttcccgtct
     3781 ggaacaacgg cccagtttca tccgtgtgaa tccgtgttca tccgtggctg atccttcttt
     3841 cccccatccg aaggtgtatc catgcccaat cttctcgatc ccgacgccct ggcccaagcg
     3901 cccagtcggc ctagcttctt ccgttaggtg tctcaacaaa cgcatcggct tgctcgtact
     3961 gcccctggcg ttcagttcgc cacgcacccg cgatcgaagg gagaagtcca tggccaccca
     4021 caccatccgc ctccaccgcg tggtccgtgc gacgcccgaa cgggtctacc gggccttcct
     4081 ggatgccgat gcgatggtca aatggctccc gccgcacggc ttcacgggca gggtccacca
     4141 cctggaggcc aaggtcggcg gcacctaccg gatgtccttc acgaatttca gcacgggcca
     4201 cagccactcc ttcggcggcg cgtatctgga gctggtgccc catgagcgca tccggcatac
     4261 ggacaccttc gacgatccca acctgccggg agagatgcag acgaccatct ccctgaagca
     4321 ggtctcctgc ggaaccgagc tggacatcgt gcaggagggc atccccgccg tcatcccccc
     4381 cgaggcctgc cacctgggct ggcaggaatc gctcaccctg ctcgcgcagc tggtcgaggc
     4441 ggatattccg gcctgatttt tcatctgtgt ccatctgtgt gaatctgtgg acgaatcctt
     4501 ttccctgtcc acggaagctc catgcccgac ctcctcgatc ccgcctccct ggacctggcc
     4561 gctgatcccg agctgggccc gctgctggcg gcctgcccgg acatcgcgcc cctgcgcttc
     4621 cgggatgggg agtgcctcgt gacggagggg gaggactccc aggacgtctt catcgtccgc
     4681 aagggcagcc tggtggtgga gaagaccctg ccggacggca cggcacggcc cctggcccag
     4741 atcgagtgca gcgcggcgtc gcccgccatc atcggcgaaa tggcctattt cggcgccctg
     4801 cgccggacgg ccacggtgcg ggcggtgggg gcctgccagg ccctgcacct gaagcctgcc
     4861 cacctggacg ccatcatggc gggcttcccg ggcctcaccc gcatcctctg ccgccagttc
     4921 acggcgcggc tgaaggaggc caacgaggaa ctgcgggacc tccgcgcccg cttccacctg
     4981 gccccggagc gccgcatggc ccaggcgggc gaggtgatct tcgcggcggg aacgcctgcg
     5041 gatgcggtgt tccagctggc catgggctcc gtgcggttcg acgggccgga tggctcgaag
     5101 gtgctgcgcg ccgaggatct gcccggcggc ttcctgggac tggaggccta cctgcgccag
     5161 cgcccccacg gcgccacggc cacggcggag gaagcctgct tcctggcggt catcggcgcc
     5221 ggtcaccgcg aggcattcct gcgcagccat cccgcactgg cgctgaacct gctggagcgg
     5281 ccctagacga acagcaccgc gtgcaccggc ggcaggtgct cggccagggt gatccagtcg
     5341 tcgcccgcgt tctcgctgat ccacacggag cccgtggtgg aaccgaaggc caggcgctcg
     5401 ccgctggcgt ccaggtccaa ggcatggcgg tacaccaggt cgtaggccca ggcctggggg
     5461 agcccccggt ccaggatctc gaaggtgcgg ccgccgtcgc gggtgcggtt cacgaccacg
     5521 cggccctcgg aaggaatgcg gcgctcgtcc ttgatggccg gcacgaacca ggccgtgtcc
     5581 ggatcctccg gatgcaccac cacggggaag ccgaagaccg agggctgcac gtccgtgatc
     5641 tcagtccagg tcatggcgtc gtccgtgctg cggaagatgc cgttgtggtg ctggatccac
     5701 cacacatggg gcgcggcggg gcactgcacc atgcggtggg gatcctgcga ttccggggcc
     5761 tccaccagct cggggggcgc atagtccgcg cgcatgccct gcgtgtgtgc ggtccaggtc
     5821 ttcccgcaat cccgggtatg ccacacgccg ccgctggaga cggccaccac cacgcggttg
     5881 ccgtcccggg gatccacgca gatggagtgg atccccgggg cgtcggcacc gccgcccatc
     5941 cacttgcggc ggtcggggtg gtgccagagc gattccacca ggtgccaggt ggcgccgctg
     6001 tcctcgctcc agaagaggcc gccggggatg gtgccggccc agagcaggcc cggctgggag
     6061 gccagtcccg gcgtcaggca ccagaagcgc atgaggcgcc aggggatctc gcgaccgatg
     6121 aaatcctttt cgacatggcc ctcgggcggc gcagggtagg cgggcacgcc gatctcctcc
     6181 caggtggcgc cgcggtcccg ggagcggtgc agcttggcgc cgaagtggcc gtggtccagg
     6241 gccgcgtacc aggcgccatc gcggggatcc tgcatggcca g
//
LOCUS       DASUDT010000112         4363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1927781, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000112 DASUDT010000000
VERSION     DASUDT010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4363
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1927781"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..960)
                     /locus_tag="VFV26_02355"
     CDS             complement(187..960)
                     /locus_tag="VFV26_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4845030.1"
                     /translation="MDDRIRTLRALEPKNSGRGSYLAILEAAAGLFGQFPARDITLRD
                     ILSIAGVSNQTLYNYFPGGRDDIVLSLFDRFQRTMVEDFNENISSINPNNKEEDYVIG
                     HLSASLVRAVFVFLRQSYAVQSNLYEYLKAHNLVGMATHIGELDGAVARELAAHLGSR
                     LSKAELPRVSRLSVSVVRSIADQALMNENFDLGVLESNARMLIRSLIRTGLKKHEGPS
                     GAHEFQAYTPAPIAIVGAPISPAKRQGILDRILKRKGRG"
     gene            1262..1633
                     /locus_tag="VFV26_02360"
     CDS             1262..1633
                     /locus_tag="VFV26_02360"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845031.1"
                     /translation="MSVAKPRQETFILVVDDDTLILESASSLLSLLGYTPVAAATGEE
                     ALALLEGGLDPVLVILDMDMPGLGGARTLPEIRALRPDLPVVISTGGHSPKVAELIQA
                     YPRISLLPKPYGLRELKERLG"
     gene            1694..2308
                     /gene="gmk"
                     /locus_tag="VFV26_02365"
     CDS             1694..2308
                     /gene="gmk"
                     /locus_tag="VFV26_02365"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX4845032.1"
                     /translation="MIQHPGNVFVVSAPSGAGKSTLTQRLVQEVPDLSFSISFTTRKP
                     RPGEVDGRDYFFIDEARFDAMVAEGGFVEWVQVYGHRYGTGRDWLNGVLATGRDVLLD
                     IETTGALNLRQSVADACMIFILPPSAAALEQRLRGRGKDSDEQIRIRMQHARHELELY
                     GAYDYLVMNDDLELAYRQFESIILATRARRERMAAVAQGILQGF"
     gene            2374..3954
                     /locus_tag="VFV26_02370"
     CDS             2374..3954
                     /locus_tag="VFV26_02370"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX4845033.1"
                     /translation="MARFIKRNWMWMVMAATVAVAGPLLARSGAEGSRQRSLDTLTEI
                     MDLVQKQSPEPPAPRQLTHATIQGMLHTLDPHSNYMDESEFRLLREEQKGSFFGIGAI
                     IQQHDQGIAIISPMKGGPAERLGVRSGDIIKEIDGASTEGMSSNAALQKLRGEKGTLV
                     EIAVQRSGIAGLLRFSIPRAEVPTNSVYYSFMLNPTTGFILIKDFGETTSDEFERAVA
                     TLKKQGMKQLVLDLRGNGGGVLDAAIGICRQLLGPDQLIVSQKGRDGRDENQTRTSRG
                     TQLDPFPLVVLINRGSASASEIVTGAVQDHDRGLVVGQTSWGKGLVQSLLPINRSRGL
                     ALTTARYYTPSGRSIQRDYTHGLDDYYNPEDEKDAKPQGPEYKTDLGRTVYGGGGINP
                     DYPLPPVRLNEFMVNLRFRHSAFFRYAVQEKEKFGIRSGQQADEAVMARFRAWAQEQK
                     LPISDQDWEGNREAIQEQLSIEMQNVAFGVEAGFKLQCEKDPAILKALELMPEAEALL
                     RKKQLLHRAAPTAAAALR"
     gene            3967..>4363
                     /locus_tag="VFV26_02375"
     CDS             3967..>4363
                     /locus_tag="VFV26_02375"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4845034.1"
                     /translation="MDVTLPEHVEALRQEVRRFAEKEIRPHVMAWDEAKTFPMGVVKQ
                     LGGMGMMGVIFPEDYGGAGMGYLGYAVVVEELSRVDGSVGITVAAHNSLCSNHIYAMG
                     DERQKQAWLKPLASGKAIGAWGLTEPGSGS"
BASE COUNT          795 a         1462 c         1394 g          712 t
ORIGIN      
        1 gatccatgaa catcttcgcc acggcggtcc aggtcccggc ctgatccttc atggccagat
       61 gatgcgccgt gggcttgggg aaggggcttt cctgggccga cagggccagg acgcatccga
      121 gggaaaggag caaggcacgc atggagcctc caaaggcccc atgctacgcc ccgctgggga
      181 ggactgttag ccccgcccct tccgcttcag gatccggtcc aggatgccct gccgcttcgc
      241 ggggctgatg ggagcgccca cgatggcgat gggtgcgggc gtgtaggcct ggaactcgtg
      301 ggcgccgctg gggccctcat gcttcttcag cccggttctt atcagggagc ggatcagcat
      361 ccgggcattg gattccagca ccccaaggtc gaaattctcg ttcatcagcg cctggtcggc
      421 gatgctccgc accacgctga cgctcaggcg gctgacgcgg ggcagctcgg ccttcgacag
      481 gcggctgccc aggtgggccg ccagctcccg tgcgaccgcc ccatccagtt ccccgatgtg
      541 ggtggccatg ccgacgaggt tgtgggcctt caggtattcg taaaggttgg attgaaccgc
      601 gtagctttgc cggaggaaga cgaacaccgc ccgcaccagg gaggcggaca aatgacctat
      661 cacgtaatct tcttctttgt tgttgggatt aatcgatgaa atattctcat taaaatcttc
      721 gaccatggtc cgctggaacc gatcgaagag ggacaggacg atgtcatccc tgccgcccgg
      781 gaagtagttg tacagcgtct ggttgctgac gccggcgatg gagaggatgt ccctcagggt
      841 gatgtccctg gccgggaact gtccgaacag tcccgccgcg gcctcgagga tggccaggta
      901 ggatccgcgt cccgaattct tcggctcgag ggcgcgaagg gtcctgatcc gatcatccat
      961 tcgcctgggc tcctgtgctg aaattcacgg taagaccctt tttgagggca ttcgtagaac
     1021 actcatgaat gcaattaatt caagcactac aataaaaaca gttagacctt catgtctcct
     1081 ggaatcgaca tcttgagaaa gagggttgaa gatggttcaa agacctgggt tatttctgcc
     1141 ttattccttt aagaacatcg cgatattcgg gagagaaagt catgtcgagg gagagccttg
     1201 cgcgggttcg gaacacaggc gcgatggccc tcgtcctgtg gccggtctct ggattcaatt
     1261 catgagcgtg gcgaagcccc gccaggagac cttcatcctc gtggtggatg acgacaccct
     1321 catcctggaa tccgccagct ccctgctttc cctcctgggt tacacccctg ttgccgccgc
     1381 cacgggcgag gaggccctgg ccctgctgga gggcggtctg gatcccgtcc tcgtgatcct
     1441 cgacatggac atgcccggcc tgggcggagc ccgcaccctc ccagagatcc gcgccctcag
     1501 gcccgacctg ccggtggtga tctccaccgg gggccacagc ccgaaggtcg cggaactcat
     1561 ccaggcctat ccccgcatct ccctgctgcc caagccctac ggcctccggg agctcaagga
     1621 gcggctcggc taggccagcg gccggccgga cggtcccggc cgggctccgg taaagtgggt
     1681 caaggaggat ggcgtgatcc agcatccagg caacgtgttc gtggtttcgg cgccttcggg
     1741 cgcggggaaa tccacgttga cccagcggct ggtgcaggag gtgccggacc tgagcttctc
     1801 catctccttc accacccgga agccccggcc cggcgaggtg gatggccgcg actacttctt
     1861 catcgacgag gcccgcttcg acgccatggt ggccgagggc ggcttcgtgg aatgggtgca
     1921 ggtctacggg caccgctacg gcacgggccg ggactggctc aacggcgtgc tggccacggg
     1981 ccgggacgtg ctgctggaca tcgagaccac gggcgccctg aacctgcgcc agtccgtggc
     2041 cgatgcctgc atgatcttca tcctgccgcc ttcggccgcg gccctggagc agcgcctgcg
     2101 aggccggggc aaggactcgg acgagcagat ccgcatccgc atgcagcacg cgcggcacga
     2161 actggagctg tacggagcct acgactacct ggtgatgaat gacgaccttg aactcgccta
     2221 ccggcagttc gagagcatca tcctcgccac ccgggcccgc cgggagcgca tggctgccgt
     2281 ggcgcagggg atcctccagg gcttctgaga aaaccccgca tcgcccccgg aaggggccgg
     2341 gcgtatcctg gagtcattct ccccgggagc ctcatggccc gtttcatcaa gcgcaattgg
     2401 atgtggatgg tcatggccgc gacggtggcc gtggcaggcc ccctgctggc ccggtccggc
     2461 gcggaaggca gccggcagcg gagcctggac accctcaccg agatcatgga cctggtgcag
     2521 aagcagagcc ctgagccgcc ggcaccccgg cagctcaccc acgccaccat ccagggcatg
     2581 ctccacacgc tggaccccca ctcgaactac atggacgaaa gcgagttccg cctgctccgc
     2641 gaagagcaga agggctcctt cttcggcatc ggcgccatca tccagcagca cgaccagggc
     2701 atcgccatca tcagccccat gaagggcggc ccggccgagc ggctgggtgt gcgctccggc
     2761 gacatcatca aggagatcga cggcgccagc accgagggca tgagctccaa cgccgccctc
     2821 cagaagctcc ggggcgagaa gggcaccctg gtggagatcg ccgtgcagcg gtccggcatc
     2881 gcaggcctgc tgcgcttctc catcccccgc gccgaagtcc ccaccaacag cgtgtactac
     2941 agcttcatgc tgaaccccac cacgggcttc atcctcatca aggatttcgg cgaaaccacc
     3001 tccgacgagt tcgaaagggc cgtggccacc ctcaagaagc agggcatgaa gcagcttgtc
     3061 ctggacctgc ggggcaacgg cggcggcgtc ctggatgcgg ccatcggcat ctgccgccag
     3121 ctgctgggcc ctgaccagct catcgtgagc cagaagggcc gcgacggccg cgacgagaac
     3181 cagacccgca ccagcagggg cacccagctg gaccccttcc ccctggtcgt cctcatcaac
     3241 cgcggctccg ccagcgccag cgagatcgtc accggcgccg tgcaggatca cgaccgcggc
     3301 ctggtggtgg gccagaccag ctggggcaag ggcctggtcc agagcctgct gcccatcaac
     3361 cgctcccggg gcctggcgct gaccaccgcg cgctactaca ccccctcggg ccgcagcatc
     3421 cagcgcgact atacccacgg cctggacgac tactacaacc ccgaggacga gaaggacgcc
     3481 aagccccagg gtcccgagta caagacggac ctgggccgca cggtctacgg cggcggcggc
     3541 atcaatcccg actaccccct gcccccggtc cgcctcaacg agttcatggt caacctccgc
     3601 ttccggcatt cggccttctt ccgctacgcc gtgcaggaga aggaaaagtt cgggatccgc
     3661 tccggccagc aggccgacga ggcggtgatg gcccggttcc gggcctgggc ccaggagcag
     3721 aagctcccca tcagcgacca ggattgggag ggcaaccggg aggccatcca ggagcagctc
     3781 tccatcgaga tgcagaacgt ggccttcggc gtcgaagcgg gcttcaagct ccagtgcgag
     3841 aaggatcccg cgatcctcaa ggccctggaa ctgatgcccg aagccgaggc cctgctccgc
     3901 aagaagcagc ttctccatcg cgcggccccc accgcggccg ccgccctccg ctgaagcgag
     3961 gtacccatgg acgtcacgct ccccgagcat gttgaagccc tgcgccagga agtgcgcagg
     4021 ttcgccgaga aggagatccg cccccacgtc atggcctggg atgaggccaa gaccttcccc
     4081 atgggcgtgg tgaagcagct gggcgggatg ggcatgatgg gcgtcatctt ccccgaggat
     4141 tacggcggcg cgggcatggg ctacctggga tacgccgtgg tggtcgaaga actctcccgg
     4201 gtggacggtt ccgtgggcat caccgtggcc gcccacaaca gcctgtgcag caatcacatc
     4261 tacgccatgg gcgacgagcg gcagaagcag gcctggctga agcccctggc cagcggaaag
     4321 gccatcggcg cctggggcct cacggagccc ggttccggca gcg
//
LOCUS       DASUDT010000113         6588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1022539, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000113 DASUDT010000000
VERSION     DASUDT010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6588
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022539"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1673)
                     /gene="guaB"
                     /locus_tag="VFV26_02380"
     CDS             complement(213..1673)
                     /gene="guaB"
                     /locus_tag="VFV26_02380"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX4845035.1"
                     /translation="MLTLPLTRALTFDDVLLVPGYSEIHPNQVDLGTRLTKDITLRIP
                     LLSAAMDTVTESRMAIALAQLGGIGIVHKNLSPERQAEEVDKVKRSESGMITDPITIG
                     PDAPIRDAEALMAKFRISGVPVVEGHRLVGILTNRDLRFETRWDIPVREAMTKENLVT
                     VPVGTTLQEARAILQKHRIEKLLVVDGQGQLKGLITVKDIEKSIEYPNACKDGFGRLR
                     VGAAVGVGKDLLDRAAALVDAKVDILCLDSSHGHSKGVLDAVKALKKAFPALPLVAGN
                     VATYQGAKDLAQAGADAVKVGIGPGSICTTRIVTGAGMPQITAVAEASRACREAGITC
                     IADGGIKFSGDVAKAIAAGADAVMIGSLFAGTDEAPGETIFYGGRTFKAYRGMGSLGA
                     MKQGSKDRYFQEGKDDTKLVPEGIEGQVPYKGKMGDLVTQLMGGLRAGMGLSGGATIP
                     DFQQKAAFVEISGAGLRESHAHDVMITKEAPNYRME"
     gene            complement(1724..2662)
                     /locus_tag="VFV26_02385"
     CDS             complement(1724..2662)
                     /locus_tag="VFV26_02385"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845036.1"
                     /translation="MSLAIDALLLEREDGVPLLGPLTLSLAPGERLGLVGESGSGKSL
                     LVQALFGVLPPGVRQSGGSISAFGIPMERPGTARDRIRGARMAWVPQDPLQALNPLLT
                     LAEQLALLPGVHRKESAPAALARLVPLLTRLGLPTDGPFLRRFPHQISGGQRQRLCLA
                     MALSCDPDLLMLDEPTTALDPLAQKVFLDLVLSLQRERNLGFLWITHDLGLASRACDR
                     LLVLYGGQPVEAGPTARLLSGPGHPYTTRLLAAARRQPSTESGFLPAPQDRPAGCPFR
                     PRCPESLDTCVTWSPWVGAPGDGLRCERPLEPGPRP"
     gene            2847..3044
                     /locus_tag="VFV26_02390"
     CDS             2847..3044
                     /locus_tag="VFV26_02390"
                     /inference="COORDINATES: protein motif:HMM:NF016231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEX4845037.1"
                     /translation="MKEHFEFRKLMEEHKAADSRLGDLQRKPSLSAKESLEEVELKKT
                     KLRAKERIYSIVQEASRHAEQ"
     gene            complement(3112..3798)
                     /locus_tag="VFV26_02395"
     CDS             complement(3112..3798)
                     /locus_tag="VFV26_02395"
                     /inference="COORDINATES: protein motif:HMM:NF024978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4136 domain-containing protein"
                     /protein_id="HEX4845038.1"
                     /translation="MRSLFANSALLATLILVALGCASPNPDPRTSQFDFIYGGNLEVE
                     IDALLDPARQPAGKRYVLIPGMRDLKADDLEFRQICRFMDHALAMNGFQKAEGNERPE
                     LYIRLAYGIGTPQTETVTTGAGYSYAVGWMWFNVPPKTANITSFQRNLVAEAYDSEDP
                     AVAKQVWKTTVTSVGTTNDLRRVLPYMITEARPYFGAQTTSKYRRSISGTDRRVLDIV
                     AGPLPAQAVK"
     gene            complement(3978..5198)
                     /gene="hutI"
                     /locus_tag="VFV26_02400"
     CDS             complement(3978..5198)
                     /gene="hutI"
                     /locus_tag="VFV26_02400"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEX4845039.1"
                     /translation="MSDRRVLVNLRGLLTPDPARAWGVDRIPDAALALEGGRVAWVGR
                     AADLPADWLDAPQVDGGGAWATPGFVDPHTHLLFGGNRSGEFNRRLHGVSYQQIASEG
                     GGIRETVRATRGATVDELVASGETRLRAFRERGVVHLECKTGYGLELEAESRLTAAYA
                     ELQRRGPSLGVSLDVTLLPAHDLAPEFAGDAEANARAVAEDWLPELVHRHPGVARFCD
                     VFVETGVYTADQGRRIFEAGKRLGLIPRVHADELSWTGGAELAAKVGAASADHLMFCS
                     EAGMKAMAAADVTPVLLPGTTLFLGMRDWAPARKMIEAGCRVALATDFNPGSCPCVDP
                     LTILRLGCLQLRMTFEEAFTALTLHPARSLRRNDLGHLHLGAKAEVLLWDVDEMLELV
                     YWVGEPYRPRFLSA"
     gene            5307..>6588
                     /locus_tag="VFV26_02405"
     CDS             5307..>6588
                     /locus_tag="VFV26_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845040.1"
                     /translation="MRRLAQGLCALGLVLASAAAQAQAPAWAQAHARRWSIYRTNLLG
                     QRVWTPVPFDQMTESEQMKELLDQLKSESGRRAALAFLGRRPAASWAADALKAGEPEV
                     AHALFQLGYRQPGADPFAYLGSPDRVDRPWTHGLGLHLDKTGWRFQWIPSPALFTQGG
                     TAALPKGLEQAAQPGVLIHLKQLHPGLEKLAALGGGTGSAPGAPASGIIPALAQGSRA
                     GFAVRHLEPWLKQASPALEPLAGREAWLLHYGVDRSRGEAIQGNLVFIPGELPARTQL
                     VMALLKLNPLSSGARARVVTWTGPGASTEVQQLRGSGGVFHLIQRAEGTWISDREAPL
                     RALLFPGPQPSLGERQEWARVALSAMGPDTELSFWLAPRLGAGAAFEIQALRRRLANA
                     QQGVWPNPFVAKAAPLTGALAVSLGAGPTEKLVEA"
BASE COUNT          985 a         2211 c         2355 g         1037 t
ORIGIN      
        1 aggcccgtcg agcttctgcg caggatccac aaggcggacg ttcttcacga ggagggacat
       61 gggggctccg gggatggctt caagtctaac gaaagtctgg agtctggagt ctgaaggtac
      121 cgtttcctga ggcggcgcaa agcgccgaag cattatctct tctcgcaggc cgcaggcctg
      181 cgagccctcc agactccaga ctccggactg aatcactcca tccggtagtt cggcgcttcc
      241 ttggtgatca tgacgtcgtg ggcatggctt tcgcggaggc cggcgccgct gatttccacg
      301 aaggcggctt tctgctggaa gtcggggatg gtggcgccgc cgctgaggcc catgccggcg
      361 cggaggccgc ccatgagctg ggtgacgagg tcgcccatct tgcccttgta gggcacctgg
      421 ccctcgatgc cctcgggcac gagcttggtg tcgtccttgc cttcctggaa gtagcggtcc
      481 ttgctgccct gcttcatggc gcccaggctg cccatgccgc ggtaggcctt gaaggtgcgg
      541 ccgccgtaga agatggtctc gcccggggcc tcgtccgtgc ccgcgaagag gctgccgatc
      601 atcacggcgt cagctccggc ggcgatggcc ttggccacat cgccactgaa cttgatgccg
      661 ccatcggcga tgcaggtgat gcccgcctcg cggcaggccc ggctggcttc cgccacggcg
      721 gtgatctggg gcatgcccgc cccggtgacg atgcgcgtgg tgcagatgga cccgggtccg
      781 atgcccacct tcacggcatc ggcgccggcc tgggccagat ccttcgcgcc ctggtaggtg
      841 gccacattgc ccgccaccag gggcagggcc gggaaggcct tcttcagggc cttcacggca
      901 tcgaggacgc ccttgctgtg gccgtgggag ctgtccaggc agaggatgtc caccttggcg
      961 tccaccaggg cggcggcacg atccagcagg tccttgccca cgcccacggc ggcgcccacc
     1021 cgcaggcggc cgaacccgtc cttgcatgcg ttggggtact cgatggattt ctcgatgtcc
     1081 ttcacggtga tgaggccctt gagctggccc tggccgtcca ccaccagcag cttctcgatg
     1141 cggtgcttct ggaggatggc gcgggcctcc tggagcgtgg tgcccacggg cacggtcacc
     1201 aggttctcct tggtcatggc ctcgcgcacg gggatgtccc agcgggtctc gaagcgcagg
     1261 tcgcggttgg tcaggatgcc caccaggcgg tggccctcca ccacgggcac gccgctgatg
     1321 cggaacttgg ccatgagggc ctcggcgtcg cggatgggcg cgtccggtcc gatggtgatg
     1381 gggtcggtga tcatgccgga ttcactgcgc ttcaccttgt ccacctcctc ggcctggcgc
     1441 tcggggctga ggttcttgtg gacgatgccg atgccgccca gctgggccag ggcgatggcc
     1501 atgcggcttt ccgtcaccgt gtccatggcg gccgacagca gcgggatgcg cagggtgatg
     1561 tccttcgtga gccgggtgcc caggtccacc tggttggggt ggatctccga gtagccgggg
     1621 acgaggagga cgtcgtcgaa ggtcagggcg cgcgtcaggg gcaaggtcag catggggggc
     1681 cttttccggg cccgcagcct gcgggacctt gcatcccatg gtctcacggg cggggcccgg
     1741 gttccagggg ccgctcgcag cgcaggccgt ccccgggggc ccccacccag gggctccagg
     1801 tgacgcaggt gtccaggctc tcggggcagc ggggtcggaa agggcagccg gcaggccggt
     1861 cctggggcgc cgggaggaat ccggattccg tcgaaggctg gcgccgggcc gcggccagaa
     1921 ggcgggtggt gtaggggtgg cccgggccgg acaggaggcg ggccgtcggc cccgcctcca
     1981 cgggctggcc gccgtagagc accaggagcc ggtcgcaggc gcgggaggcg aggcccaggt
     2041 catgggtgat ccacaggaag cccaggttcc gttcccgctg gaggctcagc accaggtcca
     2101 ggaagacctt ctgggccaga ggatccaggg ccgtggtggg ctcgtccagc atcagcaggt
     2161 ccggatcgca ggagagggcc atggccaggc agaggcgctg gcgctggccg ccgctgatct
     2221 ggtggggaaa gcgccggagg aagggcccgt ccgtgggcaa cccgaggcgg gtcaggagcg
     2281 ggaccagccg cgccagggct gcgggtgcgg attccttccg gtggacgccg ggcagcaggg
     2341 ccagctgctc cgccagcgtg agcagcggat tcagagcctg gaggggatcc tgcgggaccc
     2401 aggccatccg ggcgccccgg atgcggtcgc gggcggttcc gggccgctcc atggggatgc
     2461 cgaaggccga gatggatccc ccggactgcc gcacccccgg aggcaggaca ccgaacaggg
     2521 cctggaccag caggctcttg ccggacccgc tctcacccac caggcccagg cgctccccgg
     2581 gggccagcga gagggtcagg ggccccagca ggggaacccc gtcctcccgt tccaggagca
     2641 gtgcatcgat ggccagggac atgccccaag aattccatgg aagtgatgga agtcaacggc
     2701 ttctacccga gcggcgattg cctcttgacg ccccgcgggg cggtcctaac cttgggccac
     2761 ccagtcaccc tgcggggtcc gtagtggctc cgcccaggca aggaggattc atggatttcc
     2821 tgcgcccaga acttcaggag cgcctgatga aggaacactt tgaattccgc aagctcatgg
     2881 aagagcacaa ggccgcggac tcgcgcctgg gtgatcttca gaggaagccg agcctctccg
     2941 ccaaggaatc cctcgaagag gtggaactga agaagaccaa gcttcgcgcc aaggaacgca
     3001 tctactccat cgtgcaggag gcctccaggc acgccgaaca gtagacctcc gcactcgcag
     3061 gagaagcccc gggaatcggc ccggggcttc gttttgttca gggactgggg gctatttcac
     3121 ggcctgggcc gggaggggcc ccgccacgat gtccagcacc cggcggtcgg ttccggagat
     3181 ggagcgccgg tacttgctgg tggtctgggc gccgaaatag ggcctggcct cggtgatcat
     3241 gtaggggagc acccgcctca ggtcgttggt ggtccctacg cttgtcaccg tggtcttcca
     3301 gacctgcttg gccacggccg gatcctccga gtcataggcc tccgccacca ggttccgctg
     3361 gaaggaggtg atgttggccg tcttcggggg cacgttgaac cacatccatc ccaccgcgta
     3421 ggaatacccc gcgccggtgg tgacggtctc ggtctgcggc gtcccgatgc cgtaggcgag
     3481 ccggatgtag agctcgggcc gttcgttccc ctccgccttc tggaatccgt tcatggccag
     3541 ggcatggtcc atgaaacggc atatctgcct gaactccagg tcatcggcct tcaggtcccg
     3601 catgcccgga atcaggacat agcgtttgcc agcgggctgt ctggccggat ccaggagggc
     3661 atcaatctcg acttcgaggt tgccgccgta gatgaaatcg aactgggaag tcctgggatc
     3721 ggggttcggg ctggcgcagc ccaacgcaac caggatcagc gtggcgagaa gggcgctatt
     3781 cgcaaagagg gatcgcatgg acagacctcc tgattcggcg tggtgccgat gggccaaggg
     3841 tggacggcgt ggtgattcct gatgtgtttg tctttttaag atgaatggat tctaggactg
     3901 tcttcagtcc atctcaagca gtctgtttga cccgtgagtc ttagccttcc cggcagcgcc
     3961 cctccatcgc ggcgccatca ggccgacagg aatctcggcc ggtagggttc gcccacccaa
     4021 tagaccagct ccagcatctc gtccacatcc cagagcagca cctcggcctt ggcgccgagg
     4081 tgcagatggc ccaggtcatt gcggcgcagg ctgcgggcgg ggtgcagggt cagggcggtg
     4141 aaggcctcct cgaaggtcat gcgcagctgg aggcagccca gtcgcaggat ggtgaggggg
     4201 tccacgcagg ggcaggagcc ggggttgaag tccgtggcca gggccacgcg acagccggct
     4261 tcgatcatct tccgggccgg ggcccagtcg cgcatgccga ggaagagggt cgtcccaggc
     4321 agcagcacgg gcgtgacatc cgccgcggcc atggccttca tgccggcctc gctgcagaac
     4381 atgaggtggt ccgcgctggc ggcgcccacc tttgccgcca gctcggcgcc gccggtccag
     4441 ctgagttcgt cggcatggac gcgggggatg aggcccaggc gcttcccggc ctcgaagatg
     4501 cggcggccct gatcggcggt gtagacgccg gtctccacga acacgtcgca gaaccgcgcc
     4561 acgccgggat ggcggtgcac cagctccggc agccagtcct cggccacggc ccgggcattg
     4621 gcttcggcat cgcctgcgaa ttccggcgcc aggtcgtggg cggggaggag ggtcacatcc
     4681 agggacacgc ccaggctggg gccgcgtcgc tgcagttcgg cataggctgc ggtgagccgc
     4741 gactcggctt cgagttccag gccgtagccg gtcttgcatt ccaggtggac cacgccgcgt
     4801 tcccggaagg cccgcaggcg cgtctcgccg gaggccacca attcgtccac ggtggcgccg
     4861 cgggtggcgc ggacggtctc gcggatgccg ccgccttcgg acgcgatctg ctggtagctg
     4921 acgccatgga ggcgccggtt gaattcgccg ctgcggttgc ccccgaagag caggtgcgtg
     4981 tggggatcca cgaaacccgg cgtggcccag gccccgccgc catccacctg gggcgcgtcc
     5041 agccagtccg cgggcaggtc cgccgcccgg cccacccagg ccacacggcc gccctccagg
     5101 gccagggccg catccgggat gcggtccacc ccccaggccc gggcgggatc gggggtcagc
     5161 aggccccgga ggttcacgag cacgcggcga tccgacatgg ctccagtctg ccagcaaaaa
     5221 aaccacgcga tgggccttgc gccagcccct cggcttgata gcatcgctcg acaccggagg
     5281 ttccagtgcg gggcaggggg cgtggcatga ggcgactcgc gcagggtctg tgtgcgttgg
     5341 gactggttct ggcatccgcg gcggcgcagg cacaggcgcc ggcctgggcg caggcacacg
     5401 cgcggcggtg gtcgatctac cgcacgaacc tgctggggca gcgggtctgg acgccggtcc
     5461 ccttcgacca gatgacggaa tccgagcaga tgaaagagct gctggaccag ctcaaatccg
     5521 aaagcgggcg ccgtgcggcc ctggccttcc tgggacggcg ccctgcggct tcctgggccg
     5581 ccgatgcctt gaaggccggg gaacccgagg tcgcccacgc cctcttccag ctgggctatc
     5641 gccagcccgg ggccgatccc ttcgcctacc tcggatcgcc cgatcgcgtg gatcgcccct
     5701 ggacccacgg cctgggcctg catctggaca agacgggctg gcgcttccag tggatcccca
     5761 gcccggccct cttcacccag ggcggcaccg ccgcgcttcc caagggcctg gaacaggccg
     5821 cccagcccgg cgtgctcatc cacctgaagc agctgcaccc cggcctcgaa aagctggcgg
     5881 ccctcggggg cgggaccgga tccgcacccg gcgcccccgc cagcggcatc attccggccc
     5941 tggcccaggg gagccgggcg ggcttcgcgg tccgccacct ggaaccctgg ttgaagcagg
     6001 cctcgccggc cctggagccc ctggccgggc gcgaggcctg gctgctgcac tacggggtgg
     6061 accgttcccg cggagaggcg atccagggga acctggtctt catccccggc gagctgcccg
     6121 cccgcactca gctcgtgatg gccctgttga agctgaatcc cctgagctcg ggcgcccggg
     6181 cgcgggtcgt gacctggacc ggcccaggag cctccacgga ggtccagcag ctgcgcggat
     6241 ccggcggcgt cttccacctg atccagaggg ccgagggcac ctggatcagc gaccgggagg
     6301 cccccctgcg cgccctgctg ttccccgggc cgcagccctc cctgggcgag cggcaggagt
     6361 gggcccgcgt cgccctgtcc gccatggggc cggacacgga actgtccttc tggctggccc
     6421 cgcgcctggg ggcgggcgcg gccttcgaga tccaggccct ccgccgccgc ctggccaacg
     6481 cccagcaggg cgtctggccc aatcccttcg tggccaaggc cgcgccgctc acgggcgccc
     6541 tggcggtctc cctgggggcc gggcccacgg agaaactggt ggaggcca
//
LOCUS       DASUDT010000114         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_558496, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000114 DASUDT010000000
VERSION     DASUDT010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558496"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..550
                     /locus_tag="VFV26_02410"
     CDS             56..550
                     /locus_tag="VFV26_02410"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4845041.1"
                     /translation="MIDARFLTQSPLFKNLDEVERAQILIIGRVRPVEAGEVIFREGD
                     SGDGLYIVLKGSVRISKRSATGEEALAVLEPPAYFGEMALIDLAARAADAIANEPCEL
                     FFIPLQELQSLIETQHKIALKILYALCEVLAQRLRETNDRYMSIFTIAQWGGANPGGP
                     LPVP"
     gene            577..897
                     /gene="trxA"
                     /locus_tag="VFV26_02415"
     CDS             577..897
                     /gene="trxA"
                     /locus_tag="VFV26_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX4845042.1"
                     /translation="MSDLVAHITDAEFPQAVAQGVTLVDFWAPWCGPCKMIAPVLDEL
                     AAEMKGQAKFVKMNVDENPQVAGQFGIMSIPTLIVFKDGKPVNKLIGGQPKPQLKAFV
                     ESAF"
     gene            complement(950..1861)
                     /locus_tag="VFV26_02420"
     CDS             complement(950..1861)
                     /locus_tag="VFV26_02420"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845043.1"
                     /translation="MIRRGTHILLIDDDTSVLEMVHSALAHYGMEVHAYPDAAQALEL
                     LQNPHAPEFDLVISDINMEGLDGFDVIHKVKATQPHLPVVLMTGQASVDYAIRALRMG
                     ASNLFMKPIAIRDLVQSVFHLVGLHHDLRKSEKGLLGLVNERRHFLFRSDELDIPSLM
                     HHLTDRLVPMGFASASNIDVIAMAIHEALVNALEHGNLELESSLKGDIFAAQDPYTTL
                     RTQRMADPAFAGRLIEVRLAMDTERFEVEISDEGPGFDASRLAPMLPDSDMAPHCGRG
                     FPLILLVMDEVHFNDKGNQIRMVLRRK"
     gene            complement(1877..>2798)
                     /locus_tag="VFV26_02425"
     CDS             complement(1877..>2798)
                     /locus_tag="VFV26_02425"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HEX4845044.1"
                     /translation="PRAFLALETELWPGLLQALEARGIPRLVVNGRLTEKSLRRGGPW
                     LRRAASRLSLVAARDEASAAAFRHLGAPEVRLGGNLKADLPAPRSLPGGWAALREAWA
                     PHPVVVAGNTVEGEEELVLDAWKAARAQVPGLRLILAPRQPRRFEGAADLLAGRGISF
                     HRASAWPEAADWAPVDALLLDTLGDLGAAYAEGTVALVAGGWAAAGGHNPLEPVRAGV
                     PALLGPGYANFEDLVPPLREAGLVQVAEAGELAGALVAALRAAPRRSAGPASLPEALR
                     GTLDRTLGLVAPYLAFPPRHSHGGGGSLES"
BASE COUNT          451 a          990 c          938 g          419 t
ORIGIN      
        1 gcttcggcct cgatatctgc gcccacgtgc ccctggaacc cccctcggat ccccggtgat
       61 cgacgcccga ttcctgaccc agtcccccct gttcaagaac ttggacgagg tggagcgtgc
      121 ccagatcctc atcatcggcc gggtccgccc ggtggaggcc ggcgaagtca tcttccggga
      181 aggcgattcc ggcgacggcc tctacatcgt cctcaagggc tcggtgcgca tctccaagcg
      241 cagcgccacc ggcgaggagg ccctggcggt cctggagcct cccgcctact tcggcgagat
      301 ggccctcatc gacctcgccg cccgggccgc cgatgccatc gccaacgagc cctgcgagct
      361 gtttttcatc cccctgcagg aactccagtc cctcatcgag acccagcaca agatcgccct
      421 caagatcctc tacgccctct gtgaagtgct cgcccagcgc ctgcgggaga ccaacgaccg
      481 ctacatgagc atcttcacca tcgcccagtg ggggggagcc aatcccggcg gccccctccc
      541 cgtaccctga agaccccgaa cttgaaagga gttcccatgt ccgacctcgt agcccacatc
      601 accgacgccg agttccccca ggcggtcgcc cagggcgtca ccctcgtgga tttctgggcc
      661 ccctggtgcg gcccctgcaa gatgatcgcc ccggtcctcg acgagctggc cgccgagatg
      721 aagggccagg ccaagttcgt gaagatgaac gtggacgaga acccccaggt ggccggccag
      781 ttcggcatca tgagcatccc gaccctgatc gtcttcaagg acggcaagcc ggtgaacaag
      841 ctcatcggcg gccagcccaa gccccagttg aaggcgttcg tggaaagcgc gttctgaacg
      901 ggcgcggttc cttgcgaaaa acgcggctcc ggccgcgttt ttcgtatggc tactttcgcc
      961 tcagcaccat ccggatctga ttccccttgt cgttgaagtg gacctcgtcc atcacgagga
     1021 ggatcagggg gaagccgcgg ccgcagtggg gggccatgtc cgaatccggc aacatggggg
     1081 cgaggcggct ggcatcgaag cccggcccct cgtcgctgat ctccacctcg aagcgctcgg
     1141 tgtccatggc caggcgcacc tcgatgaggc ggcccgcaaa ggccggatcc gccatgcgct
     1201 gcgtgcgcaa ggtggtgtag ggatcctggg ccgcgaagat gtcccccttc aggctggatt
     1261 ccagttcgag gttgccgtgc tccagcgcgt tcaccagggc ttcgtggatg gccatggcga
     1321 tgacatcgat gttgctggcc gaggcgaatc ccatgggcac caggcggtcc gtgaggtggt
     1381 gcatgaggct cggaatgtcc agctcgtcgg accggaacag gaagtgcctc cgctcattca
     1441 ccaggcccag caggcccttc tccgacttgc ggaggtcgtg gtgcaggccc accaggtgga
     1501 acacgctctg caccaggtcc cggatggcga tgggcttcat gaagaggttc gatgcgccca
     1561 tgcgcagtgc ccggatggcg tagtccaccg aggcctggcc cgtcatcagc accaccggca
     1621 gatggggctg ggtggcctta accttgtgga tgacatcgaa accatcgagc ccttccatgt
     1681 tgatgtcgct gatgaccaga tcgaactcgg gcgcgtgggg attctgaagg agctccaggg
     1741 cctgggccgc gtccgggtag gcatggacct ccatgccgta gtgggccagg gccgaatgga
     1801 ccatctccag cacggacgtg tcgtcatcga tcaggaggat gtgcgtcccg cgccggatca
     1861 tgggggctcc gtgtcttcag gattctaggg acccgccgcc gccatgggaa tgccggggcg
     1921 gaaaagccag gtagggggcc accaggccga gggtgcgatc cagggtgccc cgcagggcct
     1981 cgggcaggga agccgggccc gcggagcggc ggggcgcggc cctcagcgcc gccaccaggg
     2041 ccccggccag ttccccggcc tcggccacct ggaccaaacc cgcctcgcgg agaggcggca
     2101 ccagatcctc gaagttggcg tagccgggcc ccagcagggc cggcacgccc gcccggacgg
     2161 gctccagcgg attgtgcccg ccggcggcgg cccaccctcc ggccaccagg gccacggtgc
     2221 cttccgcata ggcggccccg agatcgccca gggtatccag cagcagcgcg tccaccgggg
     2281 cccagtcagc cgcttccggc caggcggagg cgcggtggaa ggaaatgccc cggcccgcca
     2341 gcaggtccgc ggccccctcg aagcggcggg gctggcgcgg cgccaggatg aggcgcaggc
     2401 ccggaacctg ggcccgggcg gccttccagg cgtccagtac cagttcctct tcgccctcca
     2461 cggtgttccc ggccaccacc accggatggg gcgcccaggc ttcgcgcagg gcggcccatc
     2521 cgccaggcag ggatcgcggc gccgggagat ccgccttcag gttgccgccg agccgcacct
     2581 ccggggcccc cagatgccgg aaggccgccg cgctggcctc gtcccgggct gccaccaggc
     2641 tgagccgcga ggccgcccgc cgcagccagg ggccgccccg gcggagcgat ttctccgtga
     2701 gccgcccgtt caccacaagg cgggggatgc cgcgggcctc cagggcctgg agcaggccgg
     2761 gccaaagttc ggtctccagc gcgaggaagg cgcggggc
//
LOCUS       DASUDT010000115         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_713436, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000115 DASUDT010000000
VERSION     DASUDT010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713436"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..893)
                     /locus_tag="VFV26_02430"
     CDS             complement(72..893)
                     /locus_tag="VFV26_02430"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX4845045.1"
                     /translation="MRIRQTRSSLYALLAAALLCLPAQAQTPAPAAPAPTYTPQEVGI
                     DEKLGATIPLDLVLKGEDGQPVTLRQLIDKPTLLTLNYFRCAGICTPQLSGVAEVLNR
                     TEAIPGKDFQVLTVSFDGRDEPEVAAQKRTNYLGEITRPFPPAAWRFLTGPDATTRAL
                     ADAVGFKFKQVENDFVHAAAIIFISPQGKVTRYMYGTTYVPADLQMAAQEAARGEAQP
                     TINKFLKFCFSYDPAGRKYVLNSTTIGATVIILAALAFVATLVRRGRKAKSEEGE"
     gene            complement(902..1615)
                     /locus_tag="VFV26_02435"
     CDS             complement(902..1615)
                     /locus_tag="VFV26_02435"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4845046.1"
                     /translation="MKIHDYLSTEELKRLGSALLLVLGFIFIAAFFAFTVVPGLRYQA
                     HTGHDPAIKAVQGDTGWLDPTDYPTAVRQVIPPIDPRTVMTPNPALMARGQALYAQSC
                     ATCHGADGKGDGPGGAGITPKPRNFTVMGTWKNGTRLEGIYKTLEEGIKGSSMASYSY
                     LSKKDRMALAHVVQSLGSFDHGASDPKALADLEKLFASAGEVIPNRIPVSRAIDLLCR
                     EYTEAHSGGAAKPSASPLP"
     gene            complement(1612..>2084)
                     /locus_tag="VFV26_02440"
     CDS             complement(1612..>2084)
                     /locus_tag="VFV26_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845047.1"
                     /translation="EGVRRDHLYNLGGFLFAFTVFWSYIGFAQYMLMWYANLPDEVIW
                     YKVRLEGAWRLITLALAGLHFVLPFFALVTRDSKKDPRRLRRVAYLMLGAHVLDIYWL
                     IFPILGTPRFSWPELSFALFFLGGILLWVRGAMQKGEDMPVGDPFLREGLEFRL"
BASE COUNT          331 a          600 c          815 g          338 t
ORIGIN      
        1 ccaggccatg aggcccttgc gctctccggt gtccaccagg tagctcggtt gcgcggtggc
       61 agcgtgggtg ctcattcgcc ctcctcggac ttggccttgc gtccccggcg gaccagtgtg
      121 gccacgaagg ccagcgccgc caggatgatc acggtggcgc cgatggtcgt ggagttcagg
      181 acgtacttgc gtcccgccgg gtcatagctg aaacagaact tcaggaactt gttgatggtg
      241 ggctgggcct ccccgcgggc ggcctcctgg gcggccatct ggaggtccgc cggcacgtag
      301 gtggtgccat acatgtagcg ggtcaccttg ccctgggggc tgatgaagat gatggccgcg
      361 gcgtggacga agtcgttctc cacctgcttg aacttgaagc ccacggcatc ggccagggcc
      421 cgggtggtgg cgtcgggtcc cgtgaggaag cgccaggccg cgggcgggaa ggggcgggtg
      481 atctcgccca ggtagttggt gcgcttctgg gcggcgacct cgggctcatc ccgcccgtcg
      541 aagctgaccg tgagcacctg gaagtccttc ccggggatgg cttcggtgcg gttcagcacc
      601 tcggccacgc cgctgagctg gggggtgcag atgcctgcgc agcggaaata gttcagggtc
      661 aggagcgtgg gcttgtcgat gagctggcgc agggtgacgg gctggccatc ctcgcccttc
      721 aggaccaggt ccagggggat ggtggcgccg agtttctcgt cgatgcccac ttcctgaggc
      781 gtgtaggtgg gcgccggtgc ggccggcgcg ggggtctggg cctgggccgg caggcacagg
      841 agggccgcgg caagcagggc gtacagggag gatcgggttt ggcggatgcg catggccggc
      901 ctcagggcag gggagaggcg gagggcttgg cggcgcctcc ggagtgggcc tcggtgtact
      961 cgcggcacag gaggtcgatg gcgcgggaga cggggatccg gttggggatg acctcgccgg
     1021 cgctggcgaa gagcttttcc agatcggcca gggccttggg gtcgctggcg ccgtggtcga
     1081 aggacccgag ggactggacg acgtgggcca gggccatgcg gtccttcttg gagaggtagc
     1141 tgtaggaggc catggaactg cccttgatgc cctcctccag ggtcttgtag atgccttcga
     1201 ggcgggtgcc gttcttccag gtccccatca cggtgaagtt gcggggcttg ggcgtgatgc
     1261 cagcaccacc gggaccatcc cccttcccgt cggccccgtg gcaggtggcg cagctctggg
     1321 cgtacagggc ctggccccgg gccatgagcg cggggttggg cgtcatgacg gtccggggat
     1381 cgatgggcgg gatgacctgg cggacggccg tgggatagtc cgtgggatcc agccagccgg
     1441 tgtcgccctg gacggccttg atggcagggt cgtggcccgt gtgggcctgg tagcggaggc
     1501 ccggcaccac ggtgaaggcg aagaaggccg caatgaagat gaacccaagc accagcagca
     1561 gggcggagcc caggcgcttc agttcctcgg tggaaaggta gtcgtggatc ttcataggcg
     1621 gaactccagg ccctcgcgga ggaagggatc gccgaccggc atgtcctcgc ccttctgcat
     1681 ggcgccgcgg acccagagga ggatcccgcc caggaagaac agggcgaagc tgagctcggg
     1741 ccaggagaag cggggagtgc cgaggatggg gaagatgagc cagtagatgt ccaggacgtg
     1801 ggctccaagc atcaggtagg ccacccggcg gaggcgcctg ggatccttct tcgaatcccg
     1861 ggtcaccagg gcgaagaagg gcagcacgaa gtgcaggccc gccagggcga gggtgatgag
     1921 gcgccaggcc ccttcgaggc gcaccttgta ccagatgacc tcgtccggca ggttggcgta
     1981 ccacatgagc atgtactggg cgaagccgat gtaggaccag aacacggtga aggcgaagag
     2041 gaagccgccc aggttgtaga ggtggtcccg gcgcacgccc tcga
//
LOCUS       DASUDT010000116         2859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_337736, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000116 DASUDT010000000
VERSION     DASUDT010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337736"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VFV26_02445"
     CDS             complement(<1..664)
                     /locus_tag="VFV26_02445"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX4845048.1"
                     /translation="MHLSSRLPQGFEPNALSGALARLRSEGREILDLTASNPTRCGFR
                     YPEAEIRAALSGPAVLAYDPDPQGSRTAREAIAAHHGCGLRPEDLLLTASTSEGYGLL
                     FKLLGDPGDEVLVPSPSYPLFDWLARLEGLHARAVPSYFHDRWHLDLGALEAAAGPRT
                     RAIVVVNPNNPTGHFLSKTEWAGLTEFCARRGLALLVDEVFADYALEPPADGLSTALA
                     DAA"
     gene            740..1417
                     /gene="elbB"
                     /locus_tag="VFV26_02450"
     CDS             740..1417
                     /gene="elbB"
                     /locus_tag="VFV26_02450"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HEX4845049.1"
                     /translation="MAKTPKVAVLLAGCGHLDGAEVREAVLALLALDQHGAAFQCIAP
                     NAQQHHVINHATGEPDTGATRNILEEAGRIARVGQCLDLAKAKAADFDALVMPGGYGV
                     AKNHCSFAFKGAEGDVRPDVAAFVRAFFDAKKPVGAICIAPALVALALSDKVSAELTL
                     GHDAGCAAAMQKLGHRHKDTPNAREIVIDEAHKLVTTPAYMFDDARLSDVWVGIERCV
                     AEVLKRV"
     gene            1514..2062
                     /locus_tag="VFV26_02455"
     CDS             1514..2062
                     /locus_tag="VFV26_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845050.1"
                     /translation="MTEHMTKGNTNGLPQGSDPESPVELGPEGTDPQGADGRAAEDGL
                     EEGSYLGEPGLQIQAEILNLIPGESSPEVKIALIELAEKEGQRGLKVAEAELAADFQR
                     FRLKTETTEKSANEDRGTLRRASLIDFAKWAAPATFAIVLAWWMVQFFRAGNVEAAKS
                     IRELLLLMIGGALGWIARRAGD"
     gene            complement(2084..2788)
                     /locus_tag="VFV26_02460"
     CDS             complement(2084..2788)
                     /locus_tag="VFV26_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845051.1"
                     /translation="MPSPSPAPWALPPEVPWPRFLRMLRQADPPRGWLEAAAELPDLR
                     KRPLLLRWIAQHPKAPAHLRSALMARLPWRGLAAVAADAAAHPQARQQATEKLQQLWA
                     GLTTGERRSLALHAPRPLWALIWRAPSSSVLDAFLQNPRLGMEALVALIQPPLRPAQA
                     EALAASRWREVSPVADQVLRVLDLSLALPESGLVLGHAAPWIRALDEEARLLAASRIT
                     TPALRRMVHPRRVDTE"
BASE COUNT          468 a          934 c         1056 g          401 t
ORIGIN      
        1 gcgccgcatc ggccagggca gtggacaggc cgtccgccgg gggctccagg gcgtagtccg
       61 cgaagacctc atccaccagg agggcgaggc cccgccgggc gcaaaactcc gtgagcccgg
      121 cccactcggt tttggacagg aaatgtcccg tgggattgtt ggggttcacc accacgatgg
      181 cccgggtgcg ggggcccgcc gcggcctcca gggcgcccag atccaggtgc cagcgatcgt
      241 ggaagtacga gggcacggcc cgggcgtgca gcccctccag ccgcgccagc cagtcgaaga
      301 gcgggtagct ggggctgggc accagcacct cgtcgccggg gtcgcccagc agcttgaaca
      361 gcagcccgta gccttcgctg gtggaggcgg tgagcagcag atcctccggg cgcagcccgc
      421 agccgtggtg ggcggcgatg gcttcccggg ccgtgcggga gccctgcgga tcggggtcgt
      481 aggcgagcac cgcgggcccg gacagggctg cccggatctc cgcttcgggg taccggaacc
      541 cgcagcgcgt gggattcgag gcggtgagat cgaggatctc ccgtccctcc gagcgcagcc
      601 gcgccagcgc ccccgacagg gcattcggct cgaaaccctg tggaagacgg gaggaaagat
      661 gcatgggtcc agggtagacg aattgcccgg ggtgcctgtt cccggggtgg ataatcgacc
      721 catccatcag gaggctccca tggcgaagac gcccaaggtc gcagtgctgc tggccggatg
      781 cggccacctg gatggcgcgg aggtgcggga ggcggtgctc gcgttgctgg ccctggacca
      841 gcacggggcg gctttccagt gcatcgcgcc caatgcccag cagcaccacg tcatcaacca
      901 cgccaccggg gaaccggaca cgggcgccac ccgcaacatc ctggaggagg ccggccgcat
      961 cgcccgggtg ggccagtgcc tggatctggc gaaggcgaag gccgccgact tcgatgcgct
     1021 ggtgatgccc ggcggctatg gcgtggccaa gaaccactgc tccttcgcct tcaagggggc
     1081 cgaaggggat gtgcggcccg acgtggcggc cttcgtgcgg gcctttttcg acgcgaagaa
     1141 gcccgtgggc gccatctgca tcgccccggc cctggtggcc ctggccctgt cggacaaggt
     1201 ctccgccgaa ctgaccctgg gccacgatgc gggctgcgcc gcggccatgc agaagctggg
     1261 gcaccgtcac aaggacaccc ccaacgcccg ggagatcgtc atcgacgaag cccacaagct
     1321 cgtcaccacg ccggcctaca tgttcgacga cgcgcggctg agcgacgtgt gggtgggcat
     1381 cgagcgctgt gtggccgagg tgctgaagcg ggtctgaacc cgcgttggga aggtggcgaa
     1441 aacgatgggc agtttctgac agccattgcc tccgtttccg gatacgctct tgccactttc
     1501 atgcgtgagc caaatgaccg aacatatgac caaggggaat accaatggcc tccctcaagg
     1561 cagcgatcct gaaagtccag tcgaacttgg cccagaagga acggaccctc aaggcgctga
     1621 cggacgagcg gccgaggacg gcctcgaaga gggctcatac cttggtgagc caggcctcca
     1681 aatccaagcg gaaatcctga acctcattcc aggtgagtcc tcacctgagg tgaagatcgc
     1741 gctcatcgag ctggctgaga aggagggcca gcgcggcctg aaggtggctg aggctgagct
     1801 ggcggcggat ttccagcggt tcaggctgaa gaccgaaacc acggagaaga gcgccaacga
     1861 agaccggggc accctccgtc gggcctccct gattgatttc gccaaatggg cggctcccgc
     1921 caccttcgcc atcgtgttgg cctggtggat ggtgcagttc ttccgagccg gcaacgttga
     1981 ggcggccaaa tccatccgcg agctgctgct gttgatgatc ggcggcgccc tgggctggat
     2041 tgcccgacgg gcaggggact gacacacccc gctgcccgct gggtcattcc gtgtccaccc
     2101 gccgcggatg caccatccgc cgcagggcgg gcgtggtgat gcggctggcg gcgagaaggc
     2161 gcgcctcctc gtccagggcc cggatccagg gcgccgcatg gcccagaacc aggccggatt
     2221 ccggcagggc caggctgagg tccaacaccc gcagcacctg gtcggccacg gggctgacct
     2281 cgcgccagcg ggaggcggcc agggcctcgg cctgggcggg gcgcaggggc ggctggatga
     2341 gggccaccag ggcctccatc cccagtctgg gattctggag gaaggcgtcg aggacgctgc
     2401 tgctgggcgc ccgccagatc agggcccaca gcgggcgggg cgcatgcagg gccaggctcc
     2461 ggcgctctcc cgtggtcagc ccggcccaga gctgctggag cttttccgtg gcctgctgcc
     2521 gggcctgggg atgggcggcc gcgtccgcag ccaccgcggc caggccccgc cagggcaggc
     2581 gggccatgag cgcggaccgg aggtgggccg gggccttggg atgctgggcg atccagcgca
     2641 gcagcagggg gcgtttcctc aggtccggca gctccgccgc agcctccagc cagcccctgg
     2701 ggggatccgc ctggcgcagc atccgcagga accggggcca gggaacctcg ggcggcaggg
     2761 cccagggcgc gggggagggg gaaggcatgg ggacagtcta gggagtctgg agcccggagt
     2821 ctggagtctg gaggtaccgc tttctgggtg gccctgcgg
//
LOCUS       DASUDT010000117         5249 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_846007, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000117 DASUDT010000000
VERSION     DASUDT010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5249
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846007"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1545)
                     /locus_tag="VFV26_02465"
     CDS             complement(<1..1545)
                     /locus_tag="VFV26_02465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845052.1"
                     /translation="MASTPSNQTRAQRMDRFMAFAISGGGLAIIGAVLAMLLFITKEA
                     LPLFLPPLVRPAGTASALPTGGIWLEEAGKAGVFLSAGEGVRALRLPTGAALPAPADG
                     PPRPWRAFTRPNPRGESLVIGADGRLSILSLAWIKPAGENDPAQWTLETRWQGGMALK
                     DQPRELLHFRLIEGGGLGGGQTLRMVALLDQGLGWADAPLEVTPAPLAWKPIPLEAGL
                     TPTAAAWSADGRHLSVGTLEGQLLDLDVEAGTALASASFGEPIQSLGFALGQSSLLVG
                     GREGRLAAYQRVRVGEAFQLQRFHVFPRLQGPVLGFMPSQRDKRFLAWTPEQAVVDHL
                     TTERRLFAAPLEGLGLAALAPRGDLILHADAATGGLRFWTLDAPHPEVSFGLLWGKTH
                     YEGYEKPEQVWQSTGGTDDFEPKFSLIPLVFGTLKGTLYAMLFAFPLAVLGALYTSQF
                     ATPRLRNAIKPTVEIMAALPSVVLGFLAGLVMAPLLERMAVEVLVYPFAVLLLMLALA
                     PFWGRLP"
     gene            complement(1630..2598)
                     /locus_tag="VFV26_02470"
     CDS             complement(1630..2598)
                     /locus_tag="VFV26_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4845053.1"
                     /translation="MRRTLILALAALTGLAASAQAIKVDPKVTTYKKVSGISGNLSSV
                     GSDTLNNLMAYWVEGFNKKYPNVKIQVEGKGSTTAPPALIESTSQLGPMSREMKNEEI
                     DKFEKKFGYKPTKVAVAIDTLAVFVNKGNPIKSLTMQQVDAIFSKTRKGGHAKDIKTW
                     GDLGLTGDAATRTLSLYGRNSASGTYGYFKEHALFKGDFKDTVKEQPGSSSVVQSIGS
                     DRFAIGYSGIGYTTSGVRALPLADEKKNGGAAFAATYENALSGKYPLSRYLYVYVNKH
                     PKKPLDPLTREFLKFALSREGQEIVVKDGFLPLTAKMEADELAKLN"
     gene            2921..5131
                     /locus_tag="VFV26_02475"
     CDS             2921..5131
                     /locus_tag="VFV26_02475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEX4845054.1"
                     /translation="MNPKKIMMINATDPEEIRVATLIDGVLFDYDVEFLHNEKIKGNL
                     YKAKVVRVDTSLQAAFVHFGGQKNGFLPLGELPRDMSGDSRRGRIQDVLQRDQEILVQ
                     AVREELGSKGAMMTGQVSLAGRYLVITPGNPVNGISRKIEGTDERRHFKQLIDTLDIP
                     EDIGVIVRTASLGVTKEDFQRDLEYLLDTYKEVLNRYKHRHGVGLVWQEDDVVTRTLR
                     DTFSADVEEVQIDDLDTFHAAQSFFKRTMPQYLDVLKHYTGKKPLFSRFQLEEQIDRV
                     YGRKVPLGSGGALVLDQTEALVAIDVNSGKTSGDGVEDMAFKTNMEAAEEVARQLRLR
                     DLAGLIAIDFIDMKRDTHIRAVQDRLVDCLKADKARMEVGKINRFGVLVMTRQRIRPS
                     LQHVNHESCPTCAGTGKVKTIEAMALSVVRKLHGILAKGGIGEIRVKLAPAIAAAVLN
                     EKRRDLAQMEEESDAKVIIQADWSMSYGEMSAEIERAEEVPAEKPAPKPHREKGAPED
                     ETVVLGGDSPISFDKALGVHGDGPKDAKKEAFKYDRRDLQRAALDERERLRALFESAK
                     PEDEEDEEGVETSGDEPKGEGAKRKRRRRRRKGGAERNGETGTASTEDRAEPGARKSF
                     QDETQPEPPKATADLVASLLTPSPRPRIGAAAPAVVAEAPAKPKRTPRAKVASTPEPA
                     APVVSEPVAEAPAKKKAAPKAKAAKAPAKKAVAEKPAEETPKPKATRAKKAKAE"
BASE COUNT          890 a         1716 c         1859 g          784 t
ORIGIN      
        1 ggggagccgc ccccagaacg gggccagcgc cagcatcagc agcaggacgg cgaaggggta
       61 gacgagcact tccaccgcca tccgctccag cagcggggcc atcaccaggc ccgccaggaa
      121 gcccagcacc acggagggga gggccgccat gatctccacg gtgggcttga tggcgttccg
      181 caggcggggc gtggcgaact gcgaggtgta gagggcgccg agcacggcca gggggaaggc
      241 gaagagcatg gcgtagaggg tgcccttcag ggtcccgaac accaggggga tgaggctgaa
      301 cttgggctcg aaatcatcgg tgccgccggt gctctgccag acctgttcgg gcttttcgta
      361 gccctcatag tgggtcttgc cccagagcag cccgaagctg acttccgggt gcggcgcgtc
      421 gagggtccag aaccggaggc ccccggtggc tgcatcggca tggaggatca ggtcgccccg
      481 gggcgccagg gcggcgaggc ccaggccctc gaggggggcg gcgaagaggc ggcgttccgt
      541 ggtcaggtgg tccaccaccg cctgttcagg cgtccaggcg aggaagcgct tgtcccgctg
      601 gctgggcatg aagccgagca cggggccctg gaggcggggg aagacatgga agcgctggag
      661 ctggaaggcc tcgcccacgc gcacccgctg gtaggcggcg agcctgcctt cccggccgcc
      721 caccaggagg ctggactggc ccagggcaaa acccagggac tggatgggct cgccgaagga
      781 ggcagaggcc agggcggttc ccgcctccac gtcgaggtcc aggagctgcc cttccagggt
      841 gcccacggac aggtggcggc catcggcgct ccaggcggcg gccgtggggg tcaggcctgc
      901 ttcgaggggg atgggtttcc atgcgagggg cgccggggtg acctccaggg gggcgtcggc
      961 ccagccgagg ccctggtcca ggagcgccac catgcggagg gtctgcccgc cgcccaggcc
     1021 gccgccctcg atcaggcgga agtggagcag ctcccggggc tggtccttga gggccatgcc
     1081 gccctgccag cgcgtttcca gggtccactg cgcggggtcg ttctccccgg cgggcttgat
     1141 ccaggcgagg ctcaggatcg agaggcggcc gtccgccccg atcaccaggc tttcccccct
     1201 ggggttgggc cgggtgaagg cgcgccaggg cctggggggt ccatccgcgg gtgccgggag
     1261 ggcggccccg gtggggaggc ggagggcgcg gaccccttcc ccggcggaga ggaagacacc
     1321 ggcctttccg gcctcctcca gccagatccc accggtgggg agggcgctgg cggtgccggc
     1381 gggccggacg agggggggca ggaagagggg cagggcctcc ttggtgatga acaggagcat
     1441 ggccagcacc gccccgatga tcgccagccc tccgccggag atggcgaagg ccatgaagcg
     1501 gtccatccgc tgcgcccggg tctggttgga gggagtgctg gccatggggt ctcgccgcgt
     1561 tgggccctgg ggcccaggat tacacgaagg cgtgccgggg gaccccggca cgccgacagg
     1621 agaaggaatc tagttcagct tggccagttc gtcggcttcc atcttggcgg tgagggggag
     1681 gaagccgtcc ttcaccacga tctcctggcc ttcccggctg agggcgaact tgaggaactc
     1741 gcgggtgagg ggatccaggg gcttcttggg gtgcttgttg acgtagacgt agagatagcg
     1801 ggacagcggg tacttgccgg agagcgcgtt ctcgtaggtc gcggcgaagg cggctccgcc
     1861 gttcttcttc tcgtcggcga ggggcagggc ccggacgccg gaggtggtgt agccgatgcc
     1921 gctgtagccg atggcaaagc ggtcggagcc gatgctctgg accacggagg aggaaccggg
     1981 ctgctccttc acggtgtcct tgaagtcacc cttgaagagg gcgtgctcct tgaagtagcc
     2041 gtaggttccg ctggcgctgt tgcggccgta gaggctcagg gtccgggtgg cggcgtcgcc
     2101 ggtcaggccg aggtcgcccc aggtcttgat gtccttggcg tggccgcctt tccgggtctt
     2161 ggagaagatg gcgtccacct gctgcatggt cagggacttg atgggattgc ccttgttcac
     2221 gaagaccgcc agggtgtcga tggccacggc caccttggtg ggcttgtagc cgaacttctt
     2281 ctcgaacttg tcgatctcct cgttcttcat ttcccggctc atggggccca gctggctggt
     2341 gctttcgatg agcgccgggg gagccgtggt ggagcccttg ccctccacct ggatcttcac
     2401 gttgggatac ttcttgttga acccctcgac ccagtaggcc atcaggttgt tcagggtgtc
     2461 ggaacccacg gagctgaggt tcccgctgat gccggagacc ttcttgtagg tcgtgacctt
     2521 cgggtcgacc ttgatggcct gggcggaggc tgccagcccg gtcagggcgg cgagcgcaag
     2581 gatgagggtt cggcgcatgg atgctcctcg tggatggttc gatgctggag gccgggcgtg
     2641 aagcctgggg cccctccatg tgacatccct gtaacatcgc ctcgcagtcc gcccttgccc
     2701 cttcgcaaat aagtgggttt aatgcttgga gatcctgtgg gtcgatcgag gcgcatgcct
     2761 ttgtccccgg ggatcgcgac catccctttt ttccaatccg ggtggccgaa gccagggcag
     2821 ggcccccttc ggtttcccga cctcccatcc cgtcatccat cccccaaggc cgccgcgcag
     2881 gtcctgcgcc agccgcagcc tgggaaccac aggagcatcc ttgaatccca agaaaatcat
     2941 gatgatcaat gccaccgatc cggaagagat ccgcgtggcc accctcatcg acggcgtgct
     3001 gttcgattac gacgtggagt tcctccacaa cgagaagatc aagggcaacc tctacaaggc
     3061 caaggtcgtg cgagtcgaca ccagcctcca ggccgccttc gtccacttcg gcggccagaa
     3121 gaacggtttc ctgcccctgg gcgagctgcc ccgcgacatg agcggtgaca gccgccgggg
     3181 ccgcatccag gacgtgctcc agcgggacca ggagatcctc gtccaggccg tgcgggagga
     3241 actgggctcc aagggcgcca tgatgaccgg ccaggtgagc ctggcgggcc gctacctggt
     3301 gatcaccccc gggaatcccg tgaacggcat cagccgcaag atcgagggca ccgacgagcg
     3361 ccgccacttc aagcagctca tcgacaccct ggacatcccc gaggacatcg gcgtcatcgt
     3421 ccgcaccgcc agcctggggg tcaccaagga ggatttccag cgcgacctgg agtacctgct
     3481 ggacacctac aaggaggtgc tgaaccgcta caagcaccgc cacggcgtgg gcctggtctg
     3541 gcaggaggat gacgtcgtca cccgcaccct gcgtgacacc ttcagcgccg atgtcgagga
     3601 agtgcagatc gacgacctgg acaccttcca tgccgcccag tccttcttca agcgcaccat
     3661 gccccagtac ctggatgtgc tgaagcacta caccggcaag aagccgctct tctcgcgctt
     3721 ccagctggaa gagcagatcg accgcgtcta cggccgcaag gtgcccctgg gcagcggcgg
     3781 cgcgctggtg ctggaccaga ccgaggccct ggtggccatc gacgtcaaca gcggcaagac
     3841 ctccggcgac ggcgtggagg acatggcctt caagaccaac atggaggctg cggaggaagt
     3901 cgcccgccag ctgcgcctgc gcgacctcgc gggcctcatc gccatcgact tcatcgatat
     3961 gaagcgcgat acccacatcc gggccgtgca ggaccgcctg gtggactgcc tcaaggccga
     4021 caaggcccgc atggaggtgg ggaagatcaa ccgcttcggg gtgctggtca tgacgcgcca
     4081 gcgcatccgc cccagcctgc agcatgtgaa ccacgagtcc tgccccacct gcgcgggcac
     4141 cggcaaggtg aagaccatcg aggccatggc cctgtccgtg gtgcgcaagc tccatggcat
     4201 cctggccaag ggcggcatcg gcgagatccg cgtgaagctg gctccggcca tcgccgccgc
     4261 cgtgctcaac gagaagcgcc gcgacctggc ccagatggag gaggagagcg acgcgaaggt
     4321 catcatccag gccgactggt ccatgtccta cggcgagatg tccgccgaga tcgagcgggc
     4381 cgaggaggtt ccggccgaga agccggcccc caagccccac cgcgagaagg gcgcgcccga
     4441 ggacgagacc gtggtcctgg gcggcgacag ccccatctcc ttcgacaagg cgctgggtgt
     4501 ccatggcgat ggccccaagg atgcgaagaa ggaagccttc aaatacgacc gccgcgacct
     4561 ccagcgggcg gccctggacg agcgggagcg cctgcgcgcc ctcttcgaaa gcgccaagcc
     4621 cgaggatgag gaggacgagg aaggagtcga gacatccggc gacgaaccca agggcgaagg
     4681 ggccaagcgc aagcgccgcc gccgccgccg gaagggtggg gccgaacgga atggtgaaac
     4741 cgggaccgcg tccaccgagg atcgcgccga accgggcgcc cgtaaatcct tccaggacga
     4801 aacccagccc gagcccccca aggccacggc agacctggtg gcgagcctcc tgacccccag
     4861 cccccgtccg cggatcggcg ctgccgcccc tgcggtcgtg gccgaggcgc ccgccaagcc
     4921 caagcggact ccccgggcaa aggtggcttc cacccctgaa cccgctgcgc cggtcgtctc
     4981 cgagccggtg gccgaggcgc ctgcgaagaa gaaggccgcg cccaaggcca aggccgccaa
     5041 ggcgcccgcg aagaaggctg tggccgaaaa gcccgccgag gaaacgccca agcccaaggc
     5101 cacccgcgcc aagaaggcga aggcggagta gctggtcgtg tccatctact ggctggcccc
     5161 gctcgcatcc ctggccaccc tcctgggtgg ctggggtgtg gtgcgcttcc tccagggacg
     5221 cgcccagttc atgcgcctgc tttcggggg
//
LOCUS       DASUDT010000118         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1596863, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000118 DASUDT010000000
VERSION     DASUDT010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596863"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..673
                     /gene="mobB"
                     /locus_tag="VFV26_02480"
     CDS             167..673
                     /gene="mobB"
                     /locus_tag="VFV26_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEX4845055.1"
                     /translation="MDMKVMGLVGWSGSGKTSAMVELLPIIRERGFVVSTMKHAHHRF
                     DVDKPGKDSFRHREAGASEVLVVTSSRWVLMHESREEPEPSIEALLERMTPVDLLLIE
                     GFKTHRHPKLEIHRQSEGKPLLHPEDPEIVAVASDCLLPGLKIPRLDLNDPAAIADFI
                     LVHTGLRA"
     gene            799..>2006
                     /gene="pepD"
                     /locus_tag="VFV26_02485"
     CDS             799..>2006
                     /gene="pepD"
                     /locus_tag="VFV26_02485"
                     /EC_number="3.4.13.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-Ala-His dipeptidase"
                     /protein_id="HEX4845056.1"
                     /translation="MDALLESLEPKTMWSYFLELSKIPRGSKNEAAAADWVADQARAL
                     GCEVERDAVGNVIIRKKATPGKEGRPATCLQAHVDMVCEKNEGTEHDFLKDPIQLVRD
                     GDLLRAKGTTLGADNGIGVAAALAVLASKDIAHGPIEALITIDEETGLTGANGLQAGR
                     LKAKFLLNLDSEEEGYLTIGCAGGVDTIVSRKLTRVAAPAGSRAYRLKVFGLKGGHSG
                     IDIHAGRGNAIRLLAQLLDATRGFGFALASIKGGNKRNAIPREASAMIFLDPAKEAAF
                     KAALSEHEAHWRAALGAFDPGLHLALEAGEAAQAMSPADAHALIQLLLALPHGVEAMS
                     PDIKGLVQTSTNLGVIDTRENEVEINLLTRSSIDASKVALSARIAATCALGGFEAHTT
                     GGYPGWKPEP"
BASE COUNT          342 a          745 c          636 g          283 t
ORIGIN      
        1 ggatggcctc gtggccaagg tcccgatagg tgtcttgcgt cattcattcc cccacatcca
       61 tccactcggc tggaagggct ccggggttca cttttcgttg ttcctgccac ggggctccgc
      121 accatcatga ggggcggggg ctcgactccc cggctgcgcg aagggcatgg acatgaaagt
      181 gatgggccta gtgggctgga gcgggagcgg caaaaccagc gcgatggtcg agctgctgcc
      241 gatcatccgg gaacgggggt tcgtggtttc gaccatgaag cacgcccacc accgcttcga
      301 tgtggacaag ccgggcaagg actcgttccg gcaccgggag gccggggcct cggaagtgct
      361 ggtggtcacc tcctcccggt gggtgctcat gcatgagtcc agggaggagc ccgaacccag
      421 catcgaggcc ctcctcgagc gcatgacgcc cgtggacctg ctcctcatcg aggggttcaa
      481 gacccaccgc caccccaagc tggagatcca ccgccagtcc gaaggcaaac ccctcctgca
      541 cccggaggac cccgagatcg tggccgtggc cagcgattgc ctcctgcccg gcttgaagat
      601 cccccgcctg gatctgaacg atccggccgc catcgcggat ttcatcctcg tccatacggg
      661 gctgcgggcc taaggtccgg gccgggatcc atgccgaccc aggggagatc gctcccaccc
      721 gtgattcccg tcacgccctg gcccaccggc ggccggtaca gttgacggaa ccgccccggc
      781 gaggggcatg gaggctttgt ggatgccctg ctcgaatccc tcgaaccgaa gaccatgtgg
      841 tcctatttcc tggaactgtc gaagatcccc cgcggatcca agaacgaggc cgccgccgcc
      901 gactgggtgg ccgatcaggc cagggccctg ggctgcgagg tcgagcgcga tgcggtcggc
      961 aacgtgatca tccggaagaa ggccacgccc ggcaaggaag ggcgccccgc cacctgcctc
     1021 caggcccacg tggacatggt ctgcgagaag aacgaaggca ccgagcacga cttcctcaag
     1081 gatcccatcc agctggtgcg cgacggcgac ctgctgcggg ccaagggcac caccctgggc
     1141 gccgacaacg gcatcggcgt ggccgcggcc ctggcggtgc tcgccagcaa ggacatcgcc
     1201 cacggcccca tcgaggccct gatcaccatc gacgaggaga ccggcctcac gggcgccaac
     1261 ggcctgcagg cgggccgcct gaaggccaag ttcctcctca acctggacag cgaggaggag
     1321 ggctacctca ccatcggctg cgccggcggc gtggacacca tcgtctcccg caagctcacc
     1381 cgcgtcgcgg cccccgcagg cagccgcgcc taccgcctga aggtgttcgg cctcaagggc
     1441 ggccactccg gcatcgacat ccatgcgggc cgcggcaacg ccatccgcct gctggcccag
     1501 ctgctggacg ccacccgcgg cttcggcttc gccctggcct ccatcaaggg cggcaacaag
     1561 cgcaacgcca tcccccgcga ggcctcggcc atgatcttcc tggatcccgc gaaggaggcg
     1621 gccttcaagg cggccctgtc ggagcacgag gcccactggc gcgcggccct cggcgccttc
     1681 gatcccggcc tgcacctggc cctggaagcg ggcgaggccg cccaggccat gtcccccgct
     1741 gacgcccacg cgctcatcca gctgctgctc gccctgcccc acggcgtcga ggccatgagc
     1801 cccgacatca agggcctggt gcagacctcc acgaacctgg gcgtcatcga cacccgcgag
     1861 aacgaagtcg agatcaacct gctcacccgc agctccatcg acgcctccaa ggtggccctc
     1921 tccgcacgca tcgccgccac ctgcgccctg ggcggcttcg aagcccacac caccggcggc
     1981 taccccggct ggaagcccga gcccaa
//
LOCUS       DASUDT010000119         5187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_28799, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000119 DASUDT010000000
VERSION     DASUDT010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28799"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /gene="yidC"
                     /locus_tag="VFV26_02490"
     CDS             <1..703
                     /gene="yidC"
                     /locus_tag="VFV26_02490"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX4845057.1"
                     /translation="PLLAFEKPFTKVIDYGFFGAVAHLLFWILKKVHGLVGNWGWAIV
                     IFTVIIRAATWTLNTKQTISMLRMKDFEPHQKALQAKYEKFGGDMTKKAEMQKELMEL
                     YKKNGHNPMGGCLPMLVQMPIFLALWSMLNAVFELRHAPFFGWIVDLSVRDPYFIYPA
                     LMGISMFVQQYMTPAVGDPAQRKMMLVLMPAMMTFFFAQSPAGLVVYYFVFNLIGILQ
                     TWWVMRSYQPQPIKV"
     gene            714..1178
                     /locus_tag="VFV26_02495"
     CDS             714..1178
                     /locus_tag="VFV26_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HEX4845058.1"
                     /translation="MRKNGASLESVPELITRWSAHLGLTVEAKFSPSGDEEAFPNRLA
                     VSGPDADLYAASRGVALDALQFLVHEAQGEREDARLAYLDVKGARLFRMQEVMAMGRF
                     AAEKARELGSHTLGALSARERRWVHLVVSREEGLGTESEGTGTFKPVRVFRK"
     gene            1188..2495
                     /locus_tag="VFV26_02500"
     CDS             1188..2495
                     /locus_tag="VFV26_02500"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA modification GTPase"
                     /protein_id="HEX4845059.1"
                     /translation="MPTANDPICAPATPPFPSAVALVRVSGTGLAATLSPLLGLPEPR
                     IATLRTLRWDGFRERALVLFFPGPASYTGEDVVEFQVHGNPRLLRRLVAHLGTLGIRL
                     AEPGEFTRRALLNGKQGLLEAEALRDLMVAESDTQIRLAQARAGGLPTWIQEARGVLA
                     PWVARAEAAVDYGEDEGILLDLLALDRELEPVRQRFHVEQVRSRAARHLQGGLRLALA
                     GRPNAGKSTLFNALAGEDRAIVTDIPGTTRDVLEVRCEWRGLPLRLYDTAGLRRTEDP
                     VERLGVARVRPVLEEADLILHLWPAQDPEPDPVLAEALVPFAGKILEVRTFADVAPAP
                     GVAIAAHRGDLDALEAALRERVLGGLAPDACLGALATDRQVALLDDLVRQLDLLSGLA
                     PGCPPELPASLLQGAWGLLTRLTGEDRAETALDEVFSGLCLGK"
     gene            complement(2470..3318)
                     /locus_tag="VFV26_02505"
     CDS             complement(2470..3318)
                     /locus_tag="VFV26_02505"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4845060.1"
                     /translation="MFLYQSAQQVATTRNLQAFFQPILELRGDVLRLLAFEGFAHGDD
                     QSFLGSPDLMCPDGEEATADRTLLDVACLTQVLRAGAGLPANTLLCLNVHTTTLALLP
                     EFPAFLAECAAEAGIPFSRIVLELNVGAQAGHGTEHLEVLETLRTHGVGMALDGFGVG
                     EANLDQILDIRPDILKLSPVLTHGLLRDPRRQAVLEALVDMTRKMGGRVLAKNLESVE
                     DFRIARWMGVTLLQGYLFGVPGPISLWREHPFPQEWHLRSFMRRPATLIPPPDRSKPT
                     SRDIIH"
     gene            3603..5063
                     /gene="gatB"
                     /locus_tag="VFV26_02510"
     CDS             3603..5063
                     /gene="gatB"
                     /locus_tag="VFV26_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX4845061.1"
                     /translation="MNPGMEAIIGLEVHIQLRTQSKLFCSCRNGYGAPPNTQTCPVCL
                     GLPGALPVLQAGAVRKAISLGLALGARIQPHSTFYRKQYVYPDLPKGYQITQGPVALI
                     EGGCLEIPGDPAVRGNAGPVSIRLERAHLEEDAGKSSHDQRPDATLVDLNRAGVPLLE
                     VVGAPDLRSPQEASDFMKALHRLVVFLGVCDGNLEEGSFRCDANVSLRRQGEPGFGTR
                     VEVKNLNSYRFVKQALAHEIQRQGALLAAGGTVAQETRGWDAGAGETRAQRSKEAATD
                     YRYFPEPDLPPLRVAEEEVAALRAALPELPEARARRWRSAFGLGEEEAATLLQDPAFT
                     AYFEAVAAASGHGKAAAHWMLGEVSRTLNERGTGIGAFPLAPEALAELVGLVESRQIS
                     FGAAKEQVYPALLNGEGTAAAIVARKGLAQVGDRGAIETLVAGVLAANPGPVAQFKAG
                     KLGLQGFLMGQVLKAGGGRLDPKVATEVLAKALAKG"
BASE COUNT          842 a         1714 c         1816 g          815 t
ORIGIN      
        1 acccctgctg gccttcgaaa agcccttcac caaggtcatc gactacgggt tcttcggcgc
       61 cgtggcgcat ctgctcttct ggatcctgaa gaaggtccac ggacttgtgg gcaactgggg
      121 ctgggccatc gtgatcttca cggtcatcat ccgcgccgcc acctggaccc tgaacaccaa
      181 acagaccatc tccatgctcc gcatgaagga cttcgagccg caccagaagg ccctccaggc
      241 caagtacgag aagttcggcg gcgacatgac caagaaggcc gagatgcaga aggagctcat
      301 ggagctctac aagaagaacg gccacaaccc catgggcggc tgcctgccca tgctggtcca
      361 gatgcccatc ttcctggccc tgtggtccat gctgaacgcc gtcttcgagc tccggcacgc
      421 ccccttcttc ggctggatcg tggatctgtc cgtccgggac ccctacttca tctacccggc
      481 gctcatgggc atctccatgt tcgtccagca gtacatgacc cccgccgtgg gcgatcccgc
      541 ccagcgcaag atgatgctgg tgctcatgcc tgccatgatg acgttcttct tcgcccagag
      601 ccccgcgggc ctggtggtct actacttcgt gttcaacctg atcggcattc tgcagacctg
      661 gtgggtcatg cggtcctacc agccccagcc catcaaggta taggagctca gccatgcgga
      721 agaacggcgc cagtctggaa tccgtgcccg agttgatcac ccgctggtcg gcccacctgg
      781 gcctgacggt ggaggcgaaa ttctcgccct ccggcgacga ggaggccttc cccaaccgtc
      841 tggcggtctc ggggcccgat gcggacctct acgccgccag ccggggcgtg gccctggacg
      901 ccctccagtt cctggtccac gaggcccagg gtgagcggga ggacgccagg ctggcctatc
      961 tggatgtgaa gggagcccgc ctgttccgca tgcaggaggt catggccatg ggccgcttcg
     1021 ccgccgagaa ggcccgggaa ctgggcagcc acaccctggg cgccctgagc gcccgggagc
     1081 gccgctgggt ccacctggtg gtgagccgcg aggagggcct gggcaccgaa agcgagggga
     1141 ccggcacctt caagcccgtc agggtcttcc ggaagtagac gggccccgtg cccacagcca
     1201 acgatcccat ctgcgccccc gccacgccgc cctttccctc ggcggtggcc ctggtgcggg
     1261 tgtcggggac gggcctggcc gccaccctct cgcccctgct ggggctgccg gaaccgcgga
     1321 tcgccaccct gcggacgctg cgctgggacg gattccggga gcgggccctg gtgcttttct
     1381 ttccgggtcc cgcaagctac accggcgagg atgtggtgga attccaggtc cacgggaacc
     1441 cgcggctcct gcgccgactg gtggcgcacc tcggcaccct gggcatccgc ctcgcggaac
     1501 cgggcgagtt cacccgccgg gccctcctga acggcaagca ggggttgttg gaggcggagg
     1561 ccctgcggga tctcatggtc gcggagtccg atacccagat ccggctggcc caggcccggg
     1621 cgggggggct tccgacctgg atccaggagg cccgtggggt cctggccccc tgggtggcgc
     1681 gggccgaggc cgccgtggac tacggcgagg acgaaggcat cttgttggat cttctagcct
     1741 tggaccgaga actggaaccc gtccggcaac ggttccacgt ggaacaagtg cgctcacggg
     1801 ccgcccggca tctccagggg gggcttcgtc tcgccctggc gggtcgcccc aacgccggga
     1861 agagcaccct cttcaacgcc ctggccggag aggaccgtgc catcgtcacg gacattcccg
     1921 ggaccacgcg ggacgttctg gaggtgcgct gcgagtggcg gggacttccc ctgcgcctct
     1981 atgacaccgc gggcctgcgg agaaccgagg atcccgtgga gcggctgggg gtggcccggg
     2041 tccgccccgt tctggaggag gcggatctga tcctgcatct ctggcccgcc caggacccgg
     2101 agccggatcc cgtcctggcc gaggccctgg tccccttcgc ggggaagatc ctggaggtcc
     2161 ggaccttcgc cgacgtggcc cccgccccgg gtgtggccat cgccgcccat cgcggtgacc
     2221 tggatgccct ggaggcggcc ctccgggagc gggtgctggg ggggctggca ccggacgcct
     2281 gcctgggggc cctggccaca gaccggcagg tggcgctcct ggatgacctg gtccgccagc
     2341 tggacctgct ttccggactg gcgcccggct gtccgccaga gcttccggcc tcccttctgc
     2401 agggggcctg ggggctgctg acccgtctga cgggggagga ccgggccgaa acggcgctgg
     2461 acgaagtgtt cagtggatta tgtctcggga agtaggcttc gagcgatcgg gaggcgggat
     2521 cagggtggcg gggcggcgca tgaagctgcg caggtgccat tcctggggga aggggtgctc
     2581 cctccacagg gagatgggcc cgggtacccc gaagaggtag ccctggagca gggtgacgcc
     2641 catccagcga gcgatgcgga agtcctccac gctttccagg ttcttggcca gcacgcgccc
     2701 gcccatcttc cgggtcatgt ccaccagggc ctccagaacg gcttggcggc ggggatcccg
     2761 gagcagccca tgggtcaaca cggggctgag cttgaggatg tccgggcgga tgtccaggat
     2821 ctgatcaagg ttggcctccc cgactccgaa cccgtccagg gccatgccca ccccgtgggt
     2881 gcggagggtc tccaggacct ccaggtgctc ggtgccatgg cccgcctgag ccccgacatt
     2941 cagctccagg acgatccggg agaagggaat gcccgcctcg gcggcgcact ccgccaggaa
     3001 ggcggggaat tcgggaagca gggccaaggt cgtggtgtgg acattgaggc agaggagggt
     3061 gttggccggc aggcccgccc cggccctcag cacctgggtg aggcaggcca cgtcgaggag
     3121 cgtccggtcc gcggtggctt cttccccatc gggacacatg aggtccgggg agccgagaaa
     3181 ggattggtca tcgccgtggg cgaagccttc gaaggccagg aggcggagca cgtccccgcg
     3241 gagttcgaga atcggctgga agaaggcctg gaggttgcga gtggtggcca cctgctgggc
     3301 ggactggtac aaaaacatgc ctacctccaa agccgatgcc cggtccctga atcggaaccg
     3361 cggggccggc aacgagatca ccgggctgct gctggatcag cccggtggga aaacctcggc
     3421 accaattgca gcccaactat agatcgaaag atatactcca caaggtcaaa aacagaaaaa
     3481 agcattgaaa aacaaggctt ttttggtgtg aaattatcga taaaccaaac acctgatgga
     3541 accacacggc ttggccgggg acgaagcacg ggtctcccgc ctacactggt tcgggagccg
     3601 ccatgaatcc ggggatggaa gccatcattg gtctcgaagt ccacatccag ctccggacgc
     3661 agtccaagct gttctgctcc tgccggaatg ggtatggagc gccaccgaat acccagacct
     3721 gtcctgtctg tctagggctg cccggcgcgc tgccggtgct ccaggccggc gcggtccgca
     3781 aggccatcag cctcgggctg gccctggggg cccggatcca gccgcacagc acgttctacc
     3841 gcaagcagta cgtctatcct gacctgccca agggctacca gatcacccaa ggccctgtgg
     3901 ccctcatcga gggaggctgc ctggagatcc cgggggatcc ggccgtgcgc gggaatgccg
     3961 ggccggtgag catccgcctg gaacgcgccc acctggagga ggatgccggg aagagcagcc
     4021 atgaccagcg gccggatgcc accctggtgg acctcaaccg ggccggggtc cccctgctgg
     4081 aggtcgtggg ggccccggac ctgagaagtc cccaggaagc ctcggatttc atgaaggccc
     4141 tccaccgtct ggtggttttc ctgggggtgt gcgatggcaa cctggaggag ggcagcttcc
     4201 gttgcgacgc caacgtgagt ctgcggcgcc agggggaacc ggggttcggc acccgggtgg
     4261 aggtgaagaa cctcaattcc tatcgcttcg tgaagcaggc cctggctcac gagatccagc
     4321 gccagggcgc cctgctggcc gccggcggca ccgtggccca ggagacccgg ggctgggatg
     4381 cgggggccgg tgaaacccgc gcccagcgct ccaaggaagc cgccacggac taccgctact
     4441 tcccggaacc ggacctgccc cccctgaggg tggccgagga ggaagtcgcc gccctccggg
     4501 ccgcgctgcc ggagctgccg gaggccaggg cccggcggtg gcgatcggcg tttggccttg
     4561 gcgaggaaga ggccgccacc ctgcttcagg acccagcctt cacggcgtat ttcgaagccg
     4621 tggccgctgc ttccggccac ggcaaggccg cggcccactg gatgctgggg gaggtgagcc
     4681 ggaccctgaa tgagcgcggg acaggcatcg gcgccttccc cctggccccg gaggctctgg
     4741 cggaactggt gggcctcgtg gaatcccgcc agatcagctt cggtgccgcc aaggagcagg
     4801 tctatcccgc ccttctgaac ggggagggga cggcggcggc catcgtggcc cggaaggggc
     4861 tggcgcaggt cggggatcgc ggcgccatcg aaaccctggt ggccggggtg ctggcggcga
     4921 acccggggcc cgtggcccag ttcaaggccg ggaagctggg actccagggg ttcctgatgg
     4981 ggcaggtcct caaggccgga ggtggccggc tggatcccaa ggtggccacc gaggtgctgg
     5041 cgaaggcgct ggccaaaggg tgatcccagc cccatgctgg cctcatgacg aacgagatcc
     5101 cctccgccct gtccgcctgt cttcccgggg tgggccatgt gtgccagggc tgcgggcggg
     5161 tgatcgtgga tgccgtggaa acgcccg
//
LOCUS       DASUDT010000120         4540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2083185, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000120 DASUDT010000000
VERSION     DASUDT010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083185"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VFV26_02515"
     CDS             <1..337
                     /locus_tag="VFV26_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845062.1"
                     /translation="LDGGPARSGLETMLTLAVPFQGEDVHRLPKGLWMRYSLQLVRGT
                     GENVRNLEVLGLFRIPRKGVADLRHDARQGRILLRLEPAALAAARSPFVLARRKDDGA
                     LVSCFVEDP"
     gene            334..1254
                     /locus_tag="VFV26_02520"
     CDS             334..1254
                     /locus_tag="VFV26_02520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4845063.1"
                     /translation="MTRPRPAAQPAPANVEMPTVARPRGEGEGLGAPAEWALVAYAGA
                     ALGRIFPLPPGESILGRAPDVQVALLDSEVSRHHARLLLEGGQVRLEDLGSTNGTLVN
                     GERPGGAVVLQAGDRLAIGAHVLKLVAMDPLERAFHETLLDLSTKDPLTGLANRSSTL
                     GEFQTRFGLSVRYGRPLSVVMADLDSFKQINDVHGHGAGDFVLQTFGERLRATLREAD
                     LAGRIGGEEFLMILPETDLGGAQTFSERLRLALGSVPVPLPGGGLEVTCSMGIAERLA
                     GDLDAGQMLARADAGLYRAKLEGRNRVCLG"
     gene            1286..2185
                     /locus_tag="VFV26_02525"
     CDS             1286..2185
                     /locus_tag="VFV26_02525"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4845064.1"
                     /translation="MSPESAPPDPSTRPGTPEARAWILVRYIGQPLGEVIPLPPEGLD
                     IGRAAECGLCLPEPEVSRRHARLEAAPGGATVLLHDLGSTNGLYVNGHRVEAEPGPVA
                     LRAGDVLRVGAHAFKLKRLDLLDRQYQQDTGAHAALDGLTGVGGRATVLTQLETHFEL
                     ARRHQRPLAVILADLDGLEQINVGYGPEAGDRVIRAFGGHLARRLRGSDPVGRLGGEE
                     FLAILPETTAALALNAAEDLRAALAGGPVDAGEGRFVHATCSLGVADLKPSDTSGGAL
                     LARADAALHRAKAEGRNRVAQAP"
     gene            2205..3620
                     /locus_tag="VFV26_02530"
     CDS             2205..3620
                     /locus_tag="VFV26_02530"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX4845065.1"
                     /translation="MSALRPPAQIGSVRLLEPLGEGGMALVFRGEDRFRGLVSAVKLL
                     RPEVHGDEGLVRRFLREGEVLTHLSHPDLVEIFAFGRSGVWPYLVMELLPGGSLKACR
                     GEAPATLVRRLVPVCGALQVAHAAGVIHRDLKPSNLLFAADGRLKVTDFGVCLWEGDE
                     GRTRATRSQMVVGTLGYMAPEQHGDPRRVDGRCDVYALGAILYEYATGQAYAQVQLPP
                     AAARPGFPPRLAGILLRALQPDPLKRLPDMETFGQELSIWLESAEAAGWGAEPLPGYR
                     TADREAATLAGPRAAEGPEARLGPYLDALATGPVGVRRSAAEGLCAAARPGDGPWLLE
                     SLRLGPEGARFALVKALGRVGDASALSPVLSWLSDPFTQREAAEAAAELALRTGRTAE
                     ALAALNEPGLGAAWRWAPRAGLGDSLWAEALVAAWPGLSAPFRLQALEAARRLPEDLR
                     SRVKAATAGAAGNARHVWEAL"
     gene            3650..4123
                     /locus_tag="VFV26_02535"
     CDS             3650..4123
                     /locus_tag="VFV26_02535"
                     /inference="COORDINATES: protein motif:HMM:NF016535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4845066.1"
                     /translation="MVLVFLVMAFAIGLAVPLQSAINNALKDSLHSGSLLAALVSFAV
                     GTLALLVVSALAGQPFAALGGLPRVAWWQWLGGALGAFFVFGTTMLAPRIGLAAMVSL
                     IVAGQVCSSLVFDRFGLLGLPERGLSWVRIGGAALILAGAILVNFGDRWLAGRTS"
     gene            complement(4127..>4540)
                     /locus_tag="VFV26_02540"
     CDS             complement(4127..>4540)
                     /locus_tag="VFV26_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845067.1"
                     /translation="RDRLPQRAAGFDLISLTDRAGRERVVDRLLDRPDLLTDLRNTPI
                     VNLHAPGPGAMHSDMRTLLGREGAGLTPDGLWVFSRDWMAPWFEHPLEFPELGLALAP
                     GTRPATPDRTWARRSRLALGSPVAGAWLPLPAVSR"
BASE COUNT          552 a         1597 c         1714 g          677 t
ORIGIN      
        1 cctggacggt ggtccagccc ggtccggcct ggagaccatg ctcaccctcg cggtgccctt
       61 ccagggcgag gatgtccacc ggctgccgaa ggggctctgg atgcgctaca gcctccagct
      121 ggtgcggggt acgggtgaga acgtgcggaa cctcgaggtg ctcggcctgt tccgcatccc
      181 gcgcaaaggc gtggccgacc tgcggcatga cgcccgccag gggcgcatcc tgctgcggct
      241 ggaacccgcc gccctcgcgg cggcacggtc gcccttcgtg ctggcgcggc gcaaggatga
      301 cggcgccctg gtcagctgtt tcgtggagga tccttgacgc gcccacgccc cgccgcgcag
      361 ccggcccccg ccaatgtcga gatgcccacg gtggcgcgac cccggggaga gggcgaaggc
      421 cttggcgcgc cggcggagtg ggccctggtg gcctatgcgg gcgctgcgtt ggggcgcatc
      481 ttccccctgc ctcccggtga atccatcctc ggccgcgccc cggatgtcca ggtggcgctg
      541 ctggacagcg aagtgagccg ccaccacgcg cggctcctcc tggagggcgg ccaggtgcgg
      601 ctcgaggatc tgggctccac caacggcacc ctggtgaatg gggagcggcc cggcggggcg
      661 gtggttctcc aggcggggga ccgcctggcc atcggcgccc acgtgctgaa gctggtggcc
      721 atggatccgc tggagcgggc cttccacgag accctgctgg acctcagcac caaggatccg
      781 ctcacgggcc tggccaaccg gagcagcacc ctcggggaat tccagacccg cttcggtctg
      841 agcgtgcgct acggccgtcc cctgtcggtg gtgatggcgg acctggactc cttcaagcag
      901 atcaacgatg tccacggcca cggcgcgggg gactttgtcc tccagacctt tggcgagcgg
      961 ctccgcgcca cgctgcggga ggccgatctc gcgggtcgca tcgggggaga agagttcctg
     1021 atgatccttc ccgaaacgga cctggggggc gcccagacct tctccgagcg gctccggctg
     1081 gcgctgggct cggttccggt gcccctgccg ggcggcgggc tggaggtgac ctgcagcatg
     1141 ggcatcgcgg agcgtctcgc cggggacctg gacgcggggc agatgctggc ccgggcggat
     1201 gcgggcctct accgggccaa gctggaaggg cggaatcgcg tgtgcctggg ctaaaaaaac
     1261 gggctgctga ggtagacttg ggccgatgtc ccccgaatcc gcgcctcctg acccatccac
     1321 ccggcctggc acgccggagg cccgcgcctg gatcctggtc cgctacatcg gccagcccct
     1381 gggcgaagtg atccccctgc cgccggaagg cctggacatc ggccgcgcgg cggaatgcgg
     1441 cctctgcctt ccggaacccg aggtgagccg tcgccatgcg cggctggagg cggcccccgg
     1501 cggggccacc gttttgctcc atgatctggg atccaccaac ggcctctacg tgaatggcca
     1561 ccgggtggag gcggagcccg gtcccgtggc tctgcgcgcg ggggatgtgc tgcgagtggg
     1621 ggcccacgcc ttcaagctca agcggctgga tctcctggac cgccagtacc agcaggacac
     1681 cggcgcccat gccgccctcg acggcctcac gggcgtgggc gggcgcgcca cggtgctcac
     1741 ccagctggag actcacttcg aactggcaag acggcaccag cgccccctgg cggtcatcct
     1801 ggcggatctc gacggtctcg agcagatcaa tgtcgggtac ggccccgagg ccggtgatcg
     1861 ggtgatccgg gccttcggcg gccatctggc ccggcgcctc cgggggtcgg atcccgtggg
     1921 ccggctggga ggcgaggaat tcctggccat ccttccggag acgacggcgg ccctggcgtt
     1981 gaatgccgcc gaggatctcc gggccgccct ggcaggaggc ccggtggatg ccggggaagg
     2041 gcgcttcgtc catgcgacgt gcagcctggg agtggccgac ctgaagccca gcgacaccag
     2101 cggcggggcg ctgctggccc gggccgatgc ggccctccat cgcgccaagg ccgagggccg
     2161 gaaccgcgtg gcccaggcgc cgtgagttcc gggaagcagc ctgcatgagt gccctccgcc
     2221 ccccggccca gatcggcagc gtgcggctgc tggagcccct gggcgaaggg ggcatggccc
     2281 tggtcttccg cggggaggac cgcttccgcg gcctggtttc ggcggtgaag ctgctgcgcc
     2341 ccgaggtcca cggggacgag gggctggtgc gccggttcct tcgcgaaggc gaggtgctca
     2401 cgcatctgtc ccacccggac ctggtggaaa tcttcgcctt cgggcgcagc ggcgtctggc
     2461 cctacctggt gatggagctg ctgccgggcg gaagcctgaa ggcctgccgg ggtgaggccc
     2521 cggccaccct ggtgcggcgc ctggtgccgg tctgcggtgc gcttcaggtg gcccatgcgg
     2581 caggcgtgat ccaccgggac ctcaagccct cgaacctgct gttcgcggcg gacggccggc
     2641 tcaaggtcac ggacttcgga gtctgcctgt gggaggggga cgaaggccgc acccgcgcca
     2701 cgcgcagcca gatggtggtg ggcaccctgg gctacatggc ccccgaacag catggggacc
     2761 cccgccgcgt ggacggacgc tgcgacgtct acgccctggg cgccatcctc tacgagtacg
     2821 ccacgggcca ggcctacgcc caggtgcagc ttccgcccgc cgcggcccgg cccgggttcc
     2881 cgccccggct ggccggaatc ctgctgcgcg ccctccagcc ggatcccctg aagcgccttc
     2941 cggacatgga aacgtttgga caagagctgt ccatttggct ggaaagtgcc gaggccgcgg
     3001 gctggggcgc cgagccgctg ccggggtacc ggactgccga tcgcgaggcc gccaccctgg
     3061 cgggtccccg ggctgcggaa gggcccgagg cccggctggg gccctacctg gatgcgctgg
     3121 ccacgggccc ggtgggcgtc cggcggtccg ccgccgaagg gctgtgcgcg gccgcccgtc
     3181 ccggggacgg gccttggctg ctggagtccc tgcgcctcgg ccccgagggc gcccggttcg
     3241 ccctggtgaa ggccctgggc cgggtggggg acgcttcggc cctttcccca gtgctctcct
     3301 ggctgtccga tcccttcacc cagcgcgaag cggcggaggc cgcggcagag ctggcgctgc
     3361 gcacgggccg gacggccgag gccctggcgg cgttgaacga accggggctg ggcgccgcct
     3421 ggcgctgggc gccccgtgcg ggcctgggag attccctttg ggctgaggcc ctggtggccg
     3481 cctggccggg tctatcggcc cccttccggc tccaggccct ggaagcggcc cgccgcctgc
     3541 ccgaggatct ccgctcccgg gtgaaggcgg ccacggccgg agccgccggg aatgcccggc
     3601 atgtctggga ggcgctctga taccatcggc ccttcttgcg gaggcgcgga tggttctggt
     3661 gttcctcgtc atggccttcg ccatcgggct ggccgtcccc ctgcagtcgg ccatcaacaa
     3721 tgcgctgaag gactcgctcc acagtggatc gctgctggcg gccctggtct cgttcgccgt
     3781 gggcaccctg gcgctgctgg tggtctccgc cctggccggg cagcccttcg ccgcgctggg
     3841 agggctgccg cgggtggcct ggtggcagtg gctgggtggc gccctggggg ccttcttcgt
     3901 gttcggaaca accatgctcg ccccgcgcat cggcctcgcg gccatggtgt ccctcatcgt
     3961 ggcggggcag gtgtgttctt cgctggtctt cgaccgcttc ggcctgctgg gcctcccgga
     4021 gcggggcctc tcctgggtcc ggatcggggg cgcggccctc atcctcgcgg gggccatcct
     4081 cgtgaacttc ggcgaccgct ggctggcggg ccggacttcg tagcgttcag cgcgagacgg
     4141 cgggcagggg cagccaggct ccggccaccg gcgagcccag ggcgaggcgg gagcgccggg
     4201 cccaggtgcg gtcgggggtg gcgggcctgg tccccggggc cagggccagg cccagctccg
     4261 ggaactcgag gggatgctcg aaccagggcg ccatccagtc ccggctgaag acccagagcc
     4321 catccggggt caggccagcg ccctcccggc ccaggagggt ccgcatgtcg ctgtgcatgg
     4381 cgccggggcc cggggcatgc aggttcacga tgggcgtgtt cctgagatcc gtgagcaggt
     4441 ccgggcggtc caggaggcgg tccaccaccc gttcacgccc ggcgcggtcc gtgagggaga
     4501 tgaggtcgaa gcccgcggcg cgctgcggca gccgatcgcg
//
LOCUS       DASUDT010000121         2696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1751670, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000121 DASUDT010000000
VERSION     DASUDT010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751670"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VFV26_02545"
     CDS             complement(<1..606)
                     /locus_tag="VFV26_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HEX4845068.1"
                     /translation="MAKAQAPDSSSILRLDQIKISQYFGCNTFSERTMRERLQKDVYK
                     AYRQALKKGEALSPEVAKSVALAMKEWALEQGCTHFTHWFLPMTGATAEKHDAFITWE
                     EPGQVIERFSGSQLIQGEPDASSFPSGGLRATFEARGYTAWDPASPAFLMEGPLGKTL
                     CIPTAFVGYHGEALDHKVPLLRSMDVLSRRAVEGLAHFGVKT"
     gene            746..919
                     /locus_tag="VFV26_02550"
     CDS             746..919
                     /locus_tag="VFV26_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845069.1"
                     /translation="MTGFPACERALFLLENLQAHQERLPRPAALAWERAAFAEVFDHA
                     GPGERIRSFLGKA"
     gene            929..1897
                     /gene="nadA"
                     /locus_tag="VFV26_02555"
     CDS             929..1897
                     /gene="nadA"
                     /locus_tag="VFV26_02555"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEX4845070.1"
                     /translation="MDLTAPYVPDLESIPAGIDLPAEIRRLKAERRAVLLAHYYQEPE
                     IQDLADFVGDSLQLSQQAAKADADVIAFCGVHFMAETAKILNATKTVVIPDMDAGCSL
                     ADRCPAEYFEQWLKQYPDHDVVSYINCSAGVKALSTVICTSSNAVRVVESLPKDRKLV
                     FAPDRHLGKWVMKQTGRDMVLFPGFCIVHEQFTAKRLAALKAQHPEAKLIAHPECDAT
                     VSQLADFVGSTAALLNYVAKDSAKAFIVATEAGILHQMRQRRPEAELIPAPADSGCNC
                     SLCPYMKLNSLEKLYLCLRDLKPEIRLDEALRVKALRPLERMLALG"
     gene            1950..>2696
                     /locus_tag="VFV26_02560"
     CDS             1950..>2696
                     /locus_tag="VFV26_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845071.1"
                     /translation="MYRHRASRFRILHPSLGLSRWQRLQQRSGLALLLLAGLVTAAML
                     IAAPRYYLMDQLNTARAAYMEAHWVDFEAVERHWKSLPSLHTLLRGDEPDVRRFLADQ
                     PLVVALLDRFEDRRLWIREGDRLVPPQDPALAQQYLGWMAHAEAAQRFEWNPPRPQDP
                     DFGKVATVVLLSDRWLVIKRWRPGSPEVERELNIALAPNRALRMGLIRETDFDRNDLK
                     RQPWGAEPHLQADPFRLAALPLGTNTKTNAF"
BASE COUNT          424 a          968 c          889 g          415 t
ORIGIN      
        1 ggtcttcacg ccgaagtggg ccaggccctc gaccgcccgc cgggacagca cgtccatgga
       61 gcgcagcagg ggcaccttgt ggtccagggc ctcgccgtgg taccccacga aggccgtggg
      121 gatgcagagc gtcttgccca ggggcccctc catgaggaag gccgggctgg cgggatccca
      181 ggcggtgtag ccgcgggcct cgaaggtggc gcgcaggccg ccgctgggga aggagctggc
      241 gtcgggctcg ccctggatga gctggctgcc gctgaagcgc tcgatgacct gcccgggctc
      301 ctcccaggtg atgaaggcgt cgtgcttctc ggcggtggcg ccggtcatgg gcaggaacca
      361 gtgggtgaag tgggtgcagc cctgctccag ggcccactcc ttcatggcca gggccacgct
      421 cttggccacc tcgggcgaca gggcctcgcc cttcttcagg gcctggcggt aggccttgta
      481 gacatccttc tggagccgct cccgcatggt gcgctcgctg aaggtgttgc agccgaagta
      541 ctggctgatc ttgatctggt ccagccttaa gatgctggat gagtctggcg cctgcgcctt
      601 ggccatgtgt cccccccgat tggacgaaaa aggcatgaat ccacctagac ctggaccgat
      661 gtccgccccc ggggggcagc catcggattc ccacatccac ctggaccctg cgatccaagc
      721 ccaggataac ggaaacgagc ttgtggtgac aggctttcct gcgtgtgaac gggccctttt
      781 tctcctcgaa aacctccaag cccatcagga gcggctgccc cgccccgccg cgctggcctg
      841 ggagcgggcc gccttcgcgg aggtcttcga tcatgccggt cccggcgagc gcatccgcag
      901 tttcctcggg aaggcctaga ctgttcgcat ggacctgacc gccccctatg tccccgacct
      961 cgagagcatc cccgcgggga tcgatctgcc cgcggagatc cggcgcctca aggccgagcg
     1021 ccgggccgtg ctcctcgccc actactacca ggagccggag atccaggacc tggccgactt
     1081 cgtgggcgac agcctccagc tcagccagca ggcggccaag gccgacgccg acgtcatcgc
     1141 cttctgcggc gtccacttca tggccgagac cgcgaagatc ctcaatgcaa caaagactgt
     1201 ggtcatcccc gacatggacg cgggctgcag cctggcggac cgctgcccgg cggagtactt
     1261 cgaacagtgg ctgaagcagt accccgacca cgacgtggtg agctacatca actgctccgc
     1321 gggcgtgaag gccctcagca ccgtcatctg caccagcagc aacgccgtgc gcgtggtgga
     1381 gagcctcccg aaggaccgca agctggtgtt cgccccggac cgccacctgg gcaagtgggt
     1441 catgaagcag acgggccgcg acatggtgct gttcccgggc ttctgcatcg tgcacgagca
     1501 gttcacggcc aagcgcctgg cggccctcaa ggcccagcac cccgaggcca agctcatcgc
     1561 ccaccccgaa tgcgacgcca ccgtgagcca gctggcggat ttcgtgggct ccacggcggc
     1621 cctgctgaac tacgtggcca aggacagcgc caaggccttc atcgtggcca ccgaggcggg
     1681 catcctccac cagatgcgcc agcggcggcc cgaggccgag ctgatcccgg cccccgccga
     1741 cagcggctgc aactgcagcc tgtgccccta catgaagctg aacagcctgg agaagctcta
     1801 cctctgtctg cgggacctga agccggagat ccgcctggac gaggccctgc gcgtgaaggc
     1861 gctccggccc ctggagcgga tgctggccct gggctgatgc ggggccggtt ccgcgggtaa
     1921 gctggcggaa cccttcccgc cgagtgccca tgtaccgcca ccgcgcctcc cgcttccgca
     1981 tcctccatcc cagcctgggg ctgtcccgct ggcagcgcct gcagcagcgc agcggcctcg
     2041 ccctcctgct gctggcgggc ctggtgaccg cggccatgct catcgccgcg ccgcgctact
     2101 acctgatgga ccagctgaac accgcgcggg cagcctacat ggaggcccac tgggtggact
     2161 tcgaggccgt ggagcgccac tggaagagcc tgcccagcct ccacaccctg ctccggggcg
     2221 acgagcccga cgtgcgccgc ttcctggcgg accagcccct ggtggtggcc ctcctggacc
     2281 gcttcgagga ccgccggctc tggatccgcg agggcgaccg gctggtgccg ccccaggatc
     2341 ccgccctggc ccagcagtac ctgggctgga tggcccatgc ggaggcggcc cagcgcttcg
     2401 agtggaaccc cccccggccg caggatccgg atttcgggaa ggtggccacg gtggtcctgc
     2461 tgtcggatcg ctggctggtc atcaagcggt ggcggccggg ttcgccggag gtggagcggg
     2521 aactcaacat cgccctggcg cccaaccggg ccctgcgcat gggcctcatc cgggagacgg
     2581 atttcgaccg gaacgatctg aagcgccaac cctggggggc ggaaccccac ctccaggccg
     2641 atcccttccg cctggctgcc ctgcccctgg gcaccaacac caagaccaac gccttc
//
LOCUS       DASUDT010000122         2410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_293756, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000122 DASUDT010000000
VERSION     DASUDT010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293756"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VFV26_02565"
     CDS             <1..791
                     /locus_tag="VFV26_02565"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX4845072.1"
                     /translation="GRLEQSLEESSWDAWIRFYKQHEFSPNSSISYYEKGEMAAWLMD
                     AALREGSRGKAGLAELFALLWTRHGENGLTDADVRRAFEALSGKDSAPFWNAYISGRA
                     ELDPAPLRRAFGLDMEARAPWESLSPEEAKDPAALRRAKAWTGLVFAPNGPTVQNVIP
                     GSPAAKAGLSFGMEVLAVDGWRTTTAAEAQRALAEPGPGAKAAVLASDRGRVFEVQVP
                     VVENPGRTHRLMPDPRTGAVQRAAFAASYGQPYPAAPVKRGGRR"
     gene            788..1459
                     /locus_tag="VFV26_02570"
     CDS             788..1459
                     /locus_tag="VFV26_02570"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4845073.1"
                     /translation="MRIAAILAAHDEVDHLGPVLEGLKPFGLHRVLVVDDGSTDGTGA
                     LAAAAGAEVLRLEPGQGGGKGQAMRAGMARLRPDAFDFYLFLDADGQHDPADLQRFLD
                     HLSIHPDTDFLIGSRFEDRAKIPAKRWRTNALGTWTLGRIAGVRWEDSQSGFRMIRKK
                     VLDRLDLRSTGFAIEMEIAMKASDWKLRWAHIPIQAIYRPGPHRSHFRGVMDTWLIAW
                     ESLKC"
     gene            complement(1528..>2410)
                     /locus_tag="VFV26_02575"
     CDS             complement(1528..>2410)
                     /locus_tag="VFV26_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845074.1"
                     /translation="GASVTRTVGGQEIRVTSFGDPYQIAPHTDRFGRPWQQAIWFTPY
                     DDGAVLTYTTLVPSGVVMAVKFVDSSSLMPWLYDLAKYLDYTYVPYGGQLKDWGEFLK
                     HRDRLPASLQNMAFAFTEGKTLRLQALWAKLDLDASHADLSPKAFLLLNMGFSRQGPG
                     VAWDLRRVSISEDEEDNYFVVLKHVHPTSAMPEADQKRWKEIAKQRHPYTQRTFEEDG
                     ASRIAAVHPAFLKPAAPAVDQSALFTLYMARVGKVDEKEMQTRIQALLKAITPASGAA
                     ASKAIQASAPAAPSAAR"
BASE COUNT          362 a          793 c          879 g          376 t
ORIGIN      
        1 ccgggcggct agaacagagc ctggaggagt ccagctggga cgcctggatc cggttctaca
       61 agcagcacga gttcagtccc aacagctcca tcagctacta cgagaagggc gaaatggccg
      121 cctggctcat ggacgcggcc ctccgcgaag gcagccgcgg caaggccggc ctggcagagc
      181 tcttcgcgct gctctggacg cggcatggcg agaacggcct cacggatgcg gatgtgcggc
      241 gggccttcga ggcgctttcc ggtaaggact ccgccccctt ctggaacgcc tacatctcgg
      301 gccgcgcgga gctggatccc gcgcccctgc gccgggcctt cggcctggac atggaggccc
      361 gggccccctg ggaatccctg tcccccgagg aggccaagga tcccgccgct ctgcgccggg
      421 ccaaggcctg gacgggcctg gtgttcgctc ccaacgggcc cactgtccag aacgtgattc
      481 ccggcagccc cgcggccaag gcgggcctca gcttcggcat ggaggtcctc gccgtggacg
      541 ggtggcggac caccaccgcc gcggaggccc agcgtgccct cgcagagccg ggacccggcg
      601 ccaaggccgc ggtgctggcc tcggaccggg gccgggtctt cgaagtccag gtgcccgtgg
      661 tggaaaaccc cggccgcacc catcgcctga tgccggatcc ccggaccggc gcggtccagc
      721 gggcggcctt cgcggcctcc tacggccagc cctatcccgc ggcgccggtg aagcggggcg
      781 ggcgccggtg aggatcgccg cgatcctcgc cgcccacgac gaggtggacc acctcgggcc
      841 cgtgctggaa gggctgaagc ccttcggcct ccaccgcgtg ctggtggtgg atgatggctc
      901 caccgatggc accggggccc tggccgcggc ggcgggggcg gaagtgctgc gcctggagcc
      961 ggggcagggc ggcgggaagg gccaggccat gcgggcgggc atggcgcgcc tgcggcccga
     1021 cgctttcgat ttctacctgt tcctggatgc ggacggccag cacgacccgg cggacctcca
     1081 gcggttcctg gaccacctgt ccatccaccc cgatacggac ttcctcatcg gatcgcgctt
     1141 cgaggaccgg gcgaagatcc ccgccaagcg ctggcgcacc aacgcgctgg gcacctggac
     1201 cctgggccgc atcgcgggcg tgcgctggga ggacagccag agcggcttcc gcatgatccg
     1261 gaagaaggtg ctggaccggc tggacctccg ctccacgggc ttcgccatcg agatggagat
     1321 cgccatgaag gcctcggact ggaagctgcg ctgggcccac atccccatcc aggccatcta
     1381 ccggcccggg ccgcaccgga gccatttccg gggcgtgatg gacacctggc tcatcgcctg
     1441 ggaatcgctg aagtgttgaa ctggcttcaa gccggttagt tcttggtggt gatccttagg
     1501 cgttttgaac gcaaattggc atcggcctca gcgcgctgcc gagggcgcag cgggggcgct
     1561 ggcctggatt gcctttgacg cggcggctcc gctggccggc gtgatggcct tgaggagggc
     1621 ctggatgcgg gtctgcattt ccttttcgtc gaccttgccc acgcgggcca tgtagagcgt
     1681 gaacagggcg gactggtcca ccgccggcgc ggcaggcttg aggaaggcgg gatggaccgc
     1741 cgcgatgcgg ctggccccgt cctcttcgaa ggtgcgctgg gtgtagggat gccgctgctt
     1801 ggcgatctcc ttccaccgct tctggtccgc ctcgggcatg gcggaggtgg ggtggacgtg
     1861 cttgagcacc acgaagtagt tgtcctcctc gtcctcggag atgctcaccc ggcgcagatc
     1921 ccaggccacg ccggggccct ggcgggaaaa gcccatgttc aggaggagga aggccttggg
     1981 ggagagatcc gcgtgggagg catccaggtc cagcttcgcc cagagggcct ggagccggag
     2041 cgtcttgcct tcggtgaagg cgaaggccat gttctggagc gaggccggga gccggtcccg
     2101 gtgcttcagg aactcccccc agtccttgag ctgcccgccg taggggacat aggtgtagtc
     2161 caggtatttc gccaggtcat agagccaggg catgagggag gaggaatcca cgaacttgac
     2221 ggccatcacc acgccggaag gcaccagggt ggtgtaggtg aggacggcgc cgtcgtcgta
     2281 gggagtgaac cagatggcct gttgccaggg acggccgaag cggtccgtgt ggggcgcgat
     2341 ctggtaggga tctccgaagg aggtcacgcg gatctcctgg ccgcccacgg tgcgggtgac
     2401 gctggctccc
//
LOCUS       DASUDT010000123         2175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_934490, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000123 DASUDT010000000
VERSION     DASUDT010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_934490"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1363
                     /locus_tag="VFV26_02580"
     CDS             164..1363
                     /locus_tag="VFV26_02580"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845075.1"
                     /translation="MLDAEESRRPGFLTAPFLLVCTFYFLVFAAGYQLFPVVPLHLRD
                     LGASLAESGRFQTAFMLGSGFGALFTGPLGDRLGPRRVLRVATLAVVGILVAYALLKA
                     RWVFYLLAPVHGLLWSALRTASIAKMGGILPLEHRAQGLSLFGLTGPGGVAVGPLVGL
                     WLMPHLGFTWMLVLLAGVFAVLHLLIGALPREAPREIQGPIFQWPDRAVWGPVAVMGL
                     VGLSFGPMPPYSAQEAKALGLAWPSAFLTCFALGMMAMRGLLALTGMGRRPVALMPAM
                     AALTALGYALLAFLPGGLARHLAAGLIYGAGYGMVHTLMLTHLLETTPPQRRGSAAGA
                     FFFAFDAATALGALGLGWVMEHGGFRWGWAIGAGLMALAIPVARRVVRRRPAVTSGPG
                     ASAILEG"
     gene            1360..>2175
                     /locus_tag="VFV26_02585"
     CDS             1360..>2175
                     /locus_tag="VFV26_02585"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845076.1"
                     /translation="MKDLSSPRPSLITRQFALVWALTFVTFFAAFQLFPTVPLRLRDL
                     GASLAESGRFMTLFTLGSALGALFTGPLGDRVGHRRLVIVSALLYAAFLAAYALMPTR
                     WGFYALAFPHGIVWSGLLTATMASLAHVLPEDRRADGLSLYGLASPGGVIVGPLLGLW
                     IQQRWGFAPIGWYLAILFVLLGALGTTLPKDHPHGRAEGFRWPDAAVFAPSFVLFCVA
                     LGYGALGTYTAQEALALHLPLPSAFLSCMAIGMVLMRLAMLRRGFGKRPIRKLP"
BASE COUNT          212 a          829 c          730 g          404 t
ORIGIN      
        1 cagcagggcg atgcgctcgc gggcgaagag cttccccgcc tcggcattct tctcgtgggc
       61 cttggccgag ccgcctttct tgacacgctc aacttccgaa tggaactgct ccagctgcat
      121 ggggacctcg gatggatcct ccagcatatg cgatcctgga cggatgctgg acgcggagga
      181 atcaaggcgg cccgggttcc tgacggcgcc cttcctgctg gtctgcacgt tctacttcct
      241 ggtgttcgcc gcgggctacc agctgtttcc cgtggtgccc ctgcacctgc gcgacctggg
      301 cgcgagcctg gcggaaagcg ggcgcttcca gacagccttc atgctcggtt cgggtttcgg
      361 cgcgctgttc acgggccccc tgggcgaccg gctggggccg cgccgggtgc tgcgggtggc
      421 cacgttggcg gtggtgggca tcctggtggc ctacgcgctg ctgaaggcgc gctgggtctt
      481 ctacctgctg gcgccggtgc atggcctgct gtggtccgcg ctgcgcaccg cgtccatcgc
      541 caagatgggc ggcatcctgc ccctggaaca ccgggcgcag ggcctgtccc tcttcggcct
      601 cacgggtccc ggcggcgtgg cggtgggccc gctggtgggc ctctggctca tgccccacct
      661 gggcttcacc tggatgctgg tcctgctggc gggcgtcttc gccgtgctgc acctgctgat
      721 cggggccctg ccccgggagg ccccccgcga gatccagggc ccaatcttcc agtggccgga
      781 ccgcgcggtc tggggccccg tggccgtcat gggactggtg ggcctcagct tcggccccat
      841 gccgccctac agcgcccagg aggccaaggc cctcggcctg gcctggccct ccgcgttcct
      901 cacctgcttc gccctgggca tgatggccat gcgcggcctc ctggcgctca ccggcatggg
      961 acggcgcccc gtggcgctga tgccggccat ggccgccctg acggccctcg gctacgccct
     1021 gctggccttc cttccgggcg gcctggcccg gcatctcgcc gcgggattga tctatggcgc
     1081 gggctacggc atggtgcaca ccctgatgct cacccacctg ctggagacca ccccgcccca
     1141 gcgccggggc tctgccgcgg gcgcgttctt cttcgccttc gatgccgcca cggccctggg
     1201 agctttgggg ctgggctggg tcatggagca cggcggcttc cgctggggct gggccatcgg
     1261 agcggggctc atggccctgg ccatccccgt ggcccggcgg gtggtccgca ggcgcccggc
     1321 cgtgacatcc gggcccgggg cctctgccat tctggaggga tgaaggacct ttccagcccc
     1381 cgcccgagtc tcatcacccg ccagttcgcg ctggtgtggg cgctgacctt cgtgacgttt
     1441 ttcgccgcct tccagctctt ccccacggtc cccctgcggc tgcgggacct gggcgccagc
     1501 ctcgcggaaa gcgggcggtt catgaccctc ttcaccctgg gcagcgccct gggcgccctg
     1561 ttcaccggcc ccctggggga ccgtgtgggc caccgccggc tggtgatcgt ctccgccctg
     1621 ctctacgcgg ccttcctcgc cgcctacgcc ctgatgccca cccgctgggg cttctacgcc
     1681 ctggcctttc cccacggcat cgtgtggtcg ggcctgctga cggccaccat ggcctcgctg
     1741 gcccacgtgc tgcccgagga ccgccgcgcc gacggcctca gcctctacgg gctggccagt
     1801 cccggcggcg tcatcgtcgg tcccctgctg ggcctctgga tccagcagcg ctggggcttc
     1861 gcgcccatcg gctggtacct cgcgatcctg ttcgtcctgc tgggcgccct ggggaccacc
     1921 ctgccgaagg accatcccca cggccgcgcc gaaggcttcc gctggcccga tgccgccgtg
     1981 ttcgcgccca gcttcgtgct cttctgcgtg gccctcggct atggcgccct cggcacctac
     2041 accgcccagg aggccctggc cctgcatctg ccgctgcctt cggccttcct gtcctgcatg
     2101 gccatcggca tggtgctcat gcgcctggcc atgctgaggc ggggcttcgg caagcgcccc
     2161 atccgcaagc tcccg
//
LOCUS       DASUDT010000124         2453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_956510, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000124 DASUDT010000000
VERSION     DASUDT010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956510"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VFV26_02590"
     CDS             <1..703
                     /locus_tag="VFV26_02590"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4845077.1"
                     /translation="DGQGLAEVCTAIHASRGDAEGFVVDLSDRAALQATCAEVLTHRG
                     GVDVLINNAGIVSGRPLLECSDEAIERTFQVNALAGFWTVRAFLPGMLAAGKGHIVTV
                     ASAAGLAGTSRLVDYCASKFAAVGFDESLRMELKRLGSPVRTTVVCPFFIDTGMFEGV
                     KTRFAWLLPILKPDYVVRRIMRAIEGNRARLIMPRFVMTVPVVRVLPPFLFDAVLGFF
                     GVNRSMDEFVGRAQK"
     gene            complement(694..2094)
                     /locus_tag="VFV26_02595"
     CDS             complement(694..2094)
                     /locus_tag="VFV26_02595"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4845078.1"
                     /translation="MTFDLEALFLRQQAARWRVAATSADQRKAKLRALLEALMAHRAE
                     AQAALAADFRKSPEEVDLTELYPVLSEIREALRHLPRWMKPRKVPTPLGLFGSAGTIR
                     QEPKGVALIISPWNYPIYLTLGPLVSALAAGNCAILKPSEFTPHTTAFLRKLLAGLFP
                     EEEVALVEGDAETAKALLALPFDHIFFTGSPAVGRAVMKAAAEHLASVTLELGGKSPV
                     LVDADASLREAARKIAWGKGLNGGQTCVAPDYVLVHERVHDALVEALKQAFRDFYGTE
                     PAARKASPDLARIINDRHFDRILALLRGSSARIAFGGDTDAATRYIGPTILTEVPPDA
                     PVMQEEIFGPLLPVLKVRDMDEAVAFVNARPKPLALYVFSGSRRAAESLLGRTTAGGG
                     CINDTVLHFAHTGLPTGGVNTSGFGKAHGIHGFEAFSNARGVLRQRTRFSAIQLMYPP
                     YTGFVRRMIDLTLRYF"
     gene            complement(2222..>2453)
                     /locus_tag="VFV26_02600"
     CDS             complement(2222..>2453)
                     /locus_tag="VFV26_02600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845079.1"
                     /translation="IGSVMFGKHLDDGTETYHSMELVRLAFPRRMYTQSHFDFAAEVI
                     AEVKAKAREIRGVKIVKQSKYLRHFTAEMAWV"
BASE COUNT          368 a          787 c          890 g          408 t
ORIGIN      
        1 ggatggccag gggctggccg aagtctgcac ggccattcac gcgagcaggg gtgatgccga
       61 gggcttcgtg gtggacctct ccgatcgggc ggccctccag gccacctgcg ccgaagtgct
      121 gacccaccgc ggcggcgtgg acgtcctcat caacaacgcc ggcatcgtct ccggcaggcc
      181 cctgctggag tgcagcgacg aggccatcga gcgcaccttc caggtgaacg ccctggccgg
      241 cttctggacc gtgcgggcct tcctgccggg catgctggcg gcggggaagg gccacatcgt
      301 caccgtggct tccgcggcgg gactggcggg cacctcgcgg ctggtggact actgcgcctc
      361 gaagttcgcc gcggtgggct tcgacgaatc cctgcgcatg gagctgaagc gcctgggcag
      421 ccccgtgcgc accacggtgg tctgcccctt cttcatcgac acgggcatgt tcgagggcgt
      481 gaagacccgc ttcgcctggc tcctgcccat cctcaagccg gactacgtcg tccgccgcat
      541 catgcgggcc atcgagggca accgggcgcg gctgatcatg ccccgcttcg tgatgaccgt
      601 tcccgtggtg cgcgtgctgc cgcccttcct cttcgatgcc gtgctgggct tcttcggggt
      661 caaccggagc atggacgagt tcgtggggcg ggctcagaaa tagcgcagcg tcaggtcgat
      721 catccgccgc acgaagcccg tgtagggcgg gtacatgagc tggatggcgg agaaccgcgt
      781 gcgctggcgc aggacgccgc gggcgttgga gaaggcctcg aagccgtgga ttccgtgggc
      841 cttgccgaag ccggaggtgt tcacgccccc cgtgggcagg cccgtgtggg cgaagtgcag
      901 gacggtgtcg ttgatgcagc cgccgcccgc cgtggtgcgg ccgaggaggc tttcggcggc
      961 ccggcggctg ccgctgaaca catagagggc caggggcttg ggccgtgcgt tcacgaaggc
     1021 caccgcctcg tccatgtccc tgaccttcag gaccggcagc aggggcccga agatctcctc
     1081 ctgcatgaca ggcgcatccg gggggacctc cgtgaggatc gtggggccga tgtagcgggt
     1141 ggcggcgtcc gtgtcgcctc cgaaggcgat gcgggcggag gatccgcgca gcagggcgag
     1201 gatgcggtcg aagtggcgat cattgatgat gcgggccagg tccgggctgg ccttccgcgc
     1261 ggcgggttcc gtcccgtaga agtcccggaa ggcctgtttc agcgcctcca ccagggcatc
     1321 gtggacccgc tcgtggacca gcacgtagtc cggggccacg caggtctggc cgccgttgag
     1381 ccccttgccc caggcgatct tgcgggcggc ttcgcgcagg ctggcgtccg cgtccaccag
     1441 caccggggac ttcccgccca gttccagggt caccgaggcc aggtgttccg cggccgcctt
     1501 catcacggcc ctgcccacgg cgggactgcc ggtgaagaag atgtggtcga agggcagggc
     1561 cagcagggcc ttggcggttt ccgcatcgcc ctccaccagg gccacctctt cttctggaaa
     1621 gaggcctgcc agcagcttcc ggaggaaggc cgtggtgtga ggcgtgaact cggagggctt
     1681 gaggatggcg cagttgccgg cggccagggc ggacaccagc ggtcccagcg tcaggtagat
     1741 ggggtagttc caggggctga tgatgagcgc cacgcccttg ggctcctggc ggatggtgcc
     1801 cgcgctgccg aacaggccca ggggcgtcgg caccttgcgg ggcttcatcc agcggggcag
     1861 gtggcgcagg gcttccctga tctcggagag gacggggtac agctccgtga ggtccacctc
     1921 ctcgggagac ttccggaagt ccgccgccag ggccgcctgg gcctcggccc ggtgggccat
     1981 gagagcctcc aggagggccc ggagcttggc cttgcgttga tccgccgagg tggccgccac
     2041 ccgccagcgg gccgcctgct gacggaggaa gagggcttcc agatcaaagg tcatgggtgc
     2101 tccaggtgcg gggggtgcgc ccatcctaca aaggattcac caccaagaca ccaagacacc
     2161 aagaaaagaa caaagccgtc cttggtgtct tggtggttcg gttttatgcg ggaaggaaac
     2221 gctacaccca ggccatctcg gcggtgaaat gccgcaggta cttgctctgc ttgacgatct
     2281 tcacgccgcg gatctcccgg gccttggcct tcacctcggc gatgacttcg gcggcgaaat
     2341 cgaagtggct ctgggtgtac atgcggcggg ggaaggccag gcgcaccagc tccatgctgt
     2401 ggtaggtctc ggtgccgtcg tccaggtgct tgccgaacat gacggagccg atc
//
LOCUS       DASUDT010000125         6410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1994806, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000125 DASUDT010000000
VERSION     DASUDT010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6410
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994806"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFV26_02605"
     CDS             <1..248
                     /locus_tag="VFV26_02605"
                     /inference="COORDINATES: protein motif:HMM:NF019146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5131 family protein"
                     /protein_id="HEX4845080.1"
                     /translation="LLGPLPSLDLDQLDWVIVGGESGPGARPIKEAWVVELRDRCECA
                     RVPFFFKQWGGVNKKRNGRLLEGRTWDGLPMPSLAAV"
     gene            296..1144
                     /locus_tag="VFV26_02610"
     CDS             296..1144
                     /locus_tag="VFV26_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX4845081.1"
                     /translation="MLRSALLLPLAALALSAGMPKATRGPAKPGVTYLYTYYDRQGRL
                     VINNLPPSYTKGQGLVLKHVGVGKVRLAVTPAEMARALKSPELIAMVDEIAQAEGVDA
                     HLARAIIQAESAFNYRARSKAGALGLMQLMPSTAERFGVLDPFDPRQNISGGVKYLKW
                     LHGYYQGDLTRVVAAYNAGEGAVNRHKGVPPFRETRAYVPKVLDLYHRKAVQPDPRQA
                     GSMALLKKGHGGFKVDDEKAVPEPTPQQRAATRIYQWTDANGRLQISDQPPPKGTAGV
                     KPFGAP"
     gene            complement(1321..1704)
                     /locus_tag="VFV26_02615"
     CDS             complement(1321..1704)
                     /locus_tag="VFV26_02615"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX4845082.1"
                     /translation="MAPSDLLDLTTLQNLVELDDGSHGLIIEMLAIFREDTHGRIHAI
                     LAAADRQDAEEFSRAAHALKGGAGAMGAKALRALSADLEILGRHGSVEAGPDLPDRLE
                     GLFRASLEALEAFVREGEARRARGF"
     gene            1778..2251
                     /locus_tag="VFV26_02620"
     CDS             1778..2251
                     /locus_tag="VFV26_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845083.1"
                     /translation="MTEAAPMTAGETALSLLFRKLHPHLEDAAHALARGAARRDLERL
                     HLKLIAARLKTVALIEAEVEALPGDSPLGEILDTLAANLTPVGESYRQSLILTQLCLE
                     EAPAELLPHVPEGCVAGSTWGPRMRDFLAHLQDPTFQARRRWEAIEEDIGETEEE"
     gene            2430..2927
                     /locus_tag="VFV26_02625"
     CDS             2430..2927
                     /locus_tag="VFV26_02625"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX4845084.1"
                     /translation="MRAHPFRFAVLAVALLAVGASLQAQGREPGFGPGHGRGEGRGFM
                     GLNLTEAQQAQVKAIHERHQAAFKAKGEAAQAARKAMRAAMADAGTDAKTLQGLHEKV
                     SAAQFDLMLEHRAVRQEILPLLTPEQKAQVEKRPMGMGPRGGRGRGPGAGRGMNPDCP
                     MVKPS"
     gene            2957..4054
                     /locus_tag="VFV26_02630"
     CDS             2957..4054
                     /locus_tag="VFV26_02630"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX4845085.1"
                     /translation="MRASAVLQATWQRTRRPRTWGAALLFGLVWNGARALMGLPDPGL
                     LDVLMPAAWVALFLVLAPLPWQWSGDDRPAAGTLRGAVQALPWMAALTLGVLLLLGSA
                     GGPPPGRGMGMLERGGMHRGMGPRRDEARLLPVPPRLWLLGVAHLSFGLLLGWVLADR
                     ERAEIQEAAARRAANEAQARALQGQMNPHVLFNAISGLTELVREDPAAAEGALVNLSE
                     LLRALLDHGSKLQAPLGDERRLVERHLALERLRLGRRLRESWDWPESLDALEVPPLMI
                     QPLVENALKHGVSMAVGGGELRVGLTHDGNRLHVRVANTGPAPAGEEGPGLGLRNLRE
                     RLRLLGAPAEALTLRREGDWTVAELRLEVKA"
     gene            4051..4788
                     /locus_tag="VFV26_02635"
     CDS             4051..4788
                     /locus_tag="VFV26_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845086.1"
                     /translation="MSGPALRVVVAEDEPFNLRRLSRLLREAGCEVAAELEDGPSVLA
                     WLARGEAVDALFLDIQMPGLTGLDVAVDLPRPIPVVFVTAYAEHAVRAFEQAATDYLL
                     KPVTAERLAATLQRLRGAQGNHGPGREAAPGPAGPFRFPVKAGGGLVMVDLARTTHFV
                     FEDEAVWAFAGDRLRTTWKTLAEAEQALGARVVRGHRHLLIRPEAVVGVRAGDSGRLL
                     VRLAGGTELEVSRGAAPMLKARLGLNG"
     gene            4937..5920
                     /locus_tag="VFV26_02640"
     CDS             4937..5920
                     /locus_tag="VFV26_02640"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4845087.1"
                     /translation="MRLFLFSLAVCAALLGQGAAQQAPKVDPGFQGYSPAVQVDGLVE
                     SIGADSLADLWEEWRIGFAQVQPKAKVRATHVPVAQAIKAFMDGSPALLHLPREMKVE
                     EAQAFQKKFGYPPIKLVVCYDAFIVFVNAANPIKEMGMDQLDAAYSTTKLAGYRPEDA
                     VETWGDLGVRTGDYNRRPINAYMRAEGLASRTTIQELVLLKGKFKPAVMACPDWSGIA
                     EAVMTDGAGLGIGTLATWLSRNKTLPVTPLHAKEAVAPTQENVVSGRYPLSRTYYLYV
                     NRVPEKGLPPVLAEFLSFVLSRDGQAAVAQAMLYPLPMEIGQLNRKRLRGN"
     gene            complement(5982..6356)
                     /locus_tag="VFV26_02645"
     CDS             complement(5982..6356)
                     /locus_tag="VFV26_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX4845088.1"
                     /translation="MRTITTPSAPAAIGPYSQAQISGGHLFTSGQIPLVPETMEMVTG
                     PIEAQAEQVLANLGAVLAAANTGWDRVVKTTVFLTDMADFAAFNAVYEKALGGAKPAR
                     STVQVAALPRGAKVEIELIAEV"
BASE COUNT          953 a         2157 c         2306 g          994 t
ORIGIN      
        1 cgcttcttgg cccgttgccg tccctggatt tagatcaact ggattgggtg atcgtgggcg
       61 gagaaagcgg gcccggggcc cgccccatca aggaagcctg ggtggttgaa ttacgggata
      121 gatgcgagtg tgctcgagta cctttcttct tcaagcaatg gggtggcgtc aacaaaaagc
      181 gcaatggccg cctgcttgaa ggacgtacct gggatggctt gcccatgccc tcgcttgccg
      241 ctgtctgagc aacggatctc tcggcctgcg ttcaaagcct tatcatggaa cccagatgct
      301 ccgctccgcc ctgctccttc ccctcgccgc cctcgccctc agcgccggga tgccgaaggc
      361 gacgcggggg cccgcgaagc ctggcgtcac ctacctctac acctactacg accggcaggg
      421 tcgcctggtc atcaacaacc tgccccccag ctacacgaag ggccaggggc tggtgctgaa
      481 gcatgtgggg gtgggcaagg tgcggctggc ggtgacgccg gcggagatgg cccgggccct
      541 gaagagcccc gagctgatcg cgatggtgga cgagatcgcc caggccgaag gcgtggatgc
      601 ccacctggcc cgggccatca tccaggcgga aagcgccttc aactaccgcg cccgctccaa
      661 ggccggggcc ctgggcctca tgcagctgat gccgtccacg gcggagcggt tcggggtgct
      721 ggaccccttc gacccccgcc agaacatctc ggggggcgtg aagtacctca agtggctcca
      781 cggctactac cagggcgatc tcacgcgggt ggtggcggcc tacaatgcgg gcgaaggcgc
      841 ggtgaaccgc cacaagggtg ttccgccctt ccgggagacg cgggcctacg tgcccaaggt
      901 gctggacctc taccaccgca aggccgtgca gccggatccc cggcaggccg gcagcatggc
      961 cctcctgaag aaggggcacg gcggcttcaa ggtggacgac gagaaggccg tgcccgagcc
     1021 cacgccccag cagcgggccg ccacgcgcat ctaccagtgg accgacgcca acgggcgcct
     1081 gcagatcagc gatcagcccc cgcccaaggg caccgccgga gtgaagcctt ttggtgcgcc
     1141 ctgactgggg cggagtgcta cccactggcg ttcgatcgtt aaagaatcca ccacagagac
     1201 acagagcatg ggcacacggc aggcggcggg cccatggcgg aggatcaccg aggcctccgt
     1261 gcctcctctg cggccacggt gtctccgtgg tgaatcccta tctttgaacg ctgcttggta
     1321 tcagaaccct cgggcccgtc tggcctcgcc ctcgcgcacg aaggcctcca gggcctcgag
     1381 gctggcgcgg aagagtccct ccaggcggtc gggcagatcc gggccagcct ccacggaacc
     1441 atggcggccc aggatttcga ggtcggcgga cagggcccgc agggccttgg cccccatggc
     1501 tccggcaccg cccttgaggg catgggccgc ccgggagaat tcttccgcgt cctgccggtc
     1561 cgccgccgcc aggatggcgt ggatgcggcc gtgggtatcc tcccggaaga tggcgagcat
     1621 ctcgatgatc aagccatggc tgccgtcatc cagctccacc aggttctgga gggtggtcag
     1681 atcgagcagg tctgaagggg ccacggggaa ctcctggctc ccatgctgaa ccaggggccg
     1741 ccgtccgtcc aatgccatgg ggtagtaacc tggaaccatg actgaagccg ctcccatgac
     1801 cgcgggtgaa accgccctct ccctgctttt ccgcaagctc catccccacc tggaggacgc
     1861 ggcccacgcc ctggcccggg gagccgcccg ccgggatctg gagcgcctgc acttgaagct
     1921 catcgcggcc cgcctcaaga ccgtggcgct catcgaggcc gaggtggagg ccctgcccgg
     1981 tgattccccc ctgggcgaga tcctcgacac cctggcggcc aacctcacgc ccgtgggtga
     2041 aagctaccgg cagagcctga tcctcaccca gctctgcctg gaggaggctc cggcggaact
     2101 gctgccccat gtccccgagg gctgcgtggc cgggtccacc tggggaccgc gcatgaggga
     2161 cttcctggcc caccttcagg atcccacctt ccaggcccgc cggcgctggg aggccatcga
     2221 ggaggatatc ggggagaccg aggaggaatg aggttccccg ggtcggattg agcccgccgg
     2281 agaccctggc gggatggccc cgttcggccc cctgggactg ccgttcaggg cccgggatct
     2341 gcgattcgag gatgcggctc caccctgggg cttcaagggg catctcctgg tgtggacgga
     2401 cgatccgccc cagacccacc ggagccccca tgcgtgccca tcccttccgt ttcgctgttc
     2461 tcgccgtggc cctgctggcc gtcggcgcct ccctccaggc ccagggccgg gaacccggtt
     2521 tcgggcccgg tcatggccgc ggcgaaggcc gcggattcat ggggctgaac ctcaccgagg
     2581 cccagcaggc ccaggtgaag gccatccacg agcggcacca ggcggccttc aaggccaagg
     2641 gcgaagccgc gcaggccgcc cgcaaggcca tgcgtgcggc catggccgat gccggcaccg
     2701 atgccaagac ccttcagggc ctgcatgaga aggtctccgc cgcgcagttc gacctgatgc
     2761 tggagcaccg ggcggtgcga caggagatcc tgcccctgct cacgccggag cagaaggcgc
     2821 aggtcgagaa gcgacccatg ggcatgggcc cccggggtgg gcgcggccgg gggcccggcg
     2881 cgggccgcgg gatgaatccc gactgcccca tggtgaagcc ctcctgatgc accccggccc
     2941 agtatcctga ggcatcatgc gcgcatcagc ggtcctccag gccacctggc agcggacgcg
     3001 gcgcccccgg acctggggcg ccgcgctgct gttcgggctg gtgtggaacg gcgcccgggc
     3061 gctcatgggt cttccggacc ccggcctgct ggacgtgctc atgcccgcgg cctgggtggc
     3121 gctcttcctg gtcctcgcgc cgctgccctg gcagtggagc ggtgatgacc gtcccgcggc
     3181 cggaaccctg cggggggcgg tccaagccct gccctggatg gcggccctca ccctgggcgt
     3241 gctgctgctc ctggggtcgg cgggcggccc gccgccgggc cggggcatgg ggatgctgga
     3301 acggggaggc atgcaccggg gcatgggccc ccgccgggac gaagcccggc ttcttcccgt
     3361 ccctccccgg ctttggctcc tgggggtggc gcacctcagc ttcgggctgc tgctgggctg
     3421 ggtgctggcg gatcgcgagc gggcggaaat ccaggaggcg gcggcccgcc gcgccgcgaa
     3481 cgaggcccag gcccgggccc tccagggcca gatgaacccg cacgtgctgt tcaacgccat
     3541 cagcggtctc accgagctgg tgcgggagga tcccgcggcg gcggaagggg ccctggtgaa
     3601 cctgtcggag ttgctgcggg ccctgctgga tcacggctcg aagctgcagg cgcccttggg
     3661 ggacgagcgc cgcctggtgg aacggcactt ggcgctggaa cgcctccgcc tgggccgccg
     3721 cctgcgggaa tcctgggact ggccggagtc cctggatgcc ctggaggtgc ccccgctgat
     3781 gatccagccc ctggtggaaa acgccctgaa acatggcgtg tccatggccg tgggtggggg
     3841 ggaactgagg gtgggcctca cccatgacgg aaaccgcctc cacgtgcggg tggccaacac
     3901 gggaccggcg cccgcggggg aagagggtcc gggcctcggc ctccggaacc tgcgggagcg
     3961 cctgcgcctg ctgggcgccc cggcggaggc gctgacgctc cgccgcgagg gcgactggac
     4021 cgtggccgag ctgaggctgg aggtgaaggc atgagcgggc cggccctgcg cgtggtggtg
     4081 gcggaggatg agcccttcaa cctgcggcgc ctgtcccggc tgctgcggga ggcgggctgc
     4141 gaagtggccg cggagctgga ggatggcccc tccgtgctcg cctggctggc ccgcggcgag
     4201 gccgtggacg cgctgttcct ggacatccag atgcccgggc tcacgggcct ggatgtggcg
     4261 gtggatctgc cgcgccccat ccccgtggtg ttcgtgacgg cctatgcgga gcatgcggtg
     4321 cgggccttcg agcaggccgc cacggactac ctgctcaagc ccgtgacggc ggagcggctg
     4381 gccgccaccc ttcagcggct gcggggcgcc caggggaacc acggacccgg ccgcgaggcg
     4441 gccccggggc ccgccgggcc cttccgcttc cccgtgaagg cggggggcgg cctggtcatg
     4501 gtggacctgg cccggaccac gcatttcgtc tttgaagacg aggccgtctg ggccttcgcg
     4561 ggcgaccgtc tgcgcaccac ctggaagacc ctggcggagg cggaacaggc cctgggcgcc
     4621 cgggtggtcc gcggacatcg gcacctgctg atccgtcccg aggccgtggt cggcgtccgc
     4681 gccggggatt cgggacggct cctggtgcgc ctcgccggcg ggacggagct ggaggtcagc
     4741 cgcggggctg cgcccatgct caaggcccgc ctggggttga acgggtaaaa tcccggatga
     4801 attcctgcaa ctgtagatga tctgatggta ggttaaggcc gggaatcaga cccgtccggc
     4861 cccattccca cccccggttc cggcgaggca cgaggctctc ccgaagggtc ccgtggttct
     4921 cgtgcctgga gttgtcatgc gtcttttcct cttctccctc gcggtttgtg cggccctgct
     4981 gggccaaggg gcggctcagc aggctccgaa ggtggatccg ggcttccagg gctactcgcc
     5041 cgccgtccag gtggatgggc tggtggaaag catcggggcg gactccctgg ccgacctgtg
     5101 ggaggaatgg cggatcggct ttgcgcaggt ccagccgaag gccaaggtga gggccaccca
     5161 tgtgcccgtg gcgcaggcca tcaaggcctt catggacggc agcccggccc tgctccacct
     5221 gccccgggag atgaaggtcg aggaggccca ggccttccag aagaagttcg gctacccgcc
     5281 catcaagctg gtggtgtgct acgacgcctt catcgtgttc gtcaatgccg cgaatcccat
     5341 caaggaaatg ggcatggacc agctggatgc ggcctattcc acgacgaagc tggccgggta
     5401 ccggcctgag gatgcggtgg agacctgggg ggatctgggg gtccggaccg gcgactacaa
     5461 ccgaaggccc atcaatgcct acatgcgggc ggaagggctg gcttcccgga ccaccatcca
     5521 ggagctggtg ctgctcaagg ggaagttcaa gcccgctgtg atggcctgcc cggattggtc
     5581 cggcatcgcg gaggccgtca tgacggatgg cgccggcctg ggcatcggca cgctggccac
     5641 ctggctgagc cgcaacaaga ccctgccggt gacgccgctg cacgcgaagg aagccgtggc
     5701 gcccacccag gagaatgtgg tctccggcag gtatcccctt tcacgcacct actacctgta
     5761 tgtgaaccgc gtgcccgaga aggggctgcc gccggtgctg gcggagttcc tgtccttcgt
     5821 cctttcacgg gatggccagg cggcggtggc ccaggccatg ctgtatcccc tgcccatgga
     5881 gatcggccag ctgaaccgga agcggctgcg gggcaactga gccggcggga acacgcagaa
     5941 ggcgcgggat tgcccgcgcc ttctgcgtgt tgggagaatg atcagacctc ggcgatgagc
     6001 tcgatctcga ctttcgcacc gcgggggagc gcggccacct gcacggtgct gcgggcgggc
     6061 ttggcgccgc ccagggcctt ttcgtagaca gcattgaagg cggcgaaatc ggccatgtcc
     6121 gtgaggaaga ccgtggtctt caccacccgg tcccagccgg tgttggcggc ggcgaggacg
     6181 gcgccgaggt tggccaggac ctgctccgcc tgggcctcga tggggcccgt gaccatctcc
     6241 atggtttcgg ggacgagggg gatctggccg gaggtgaaca ggtggccgcc ggagatctgg
     6301 gcctggctgt aggggccgat ggcggcgggg gcgctgggag tggtgatggt gcgcatggaa
     6361 gctcctggaa ccggctattg tccacttttt ttgccccagc gccgcttctt
//
LOCUS       DASUDT010000126         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1486731, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000126 DASUDT010000000
VERSION     DASUDT010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486731"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2108
                     /locus_tag="VFV26_02650"
     CDS             <1..2108
                     /locus_tag="VFV26_02650"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4845089.1"
                     /translation="AGVGAPKVLPGNKVVFETSVFPEAMTDGVKQKELADKLESGPVQ
                     AHLADSLLYRHWTDWRDFQYSHLFSATFEGKVEALTSGKQDYPGFWQSWDLSPDGREI
                     CVTTNTDAVPARSTNNDLFLISLEGDRAPRRITGDNPASDSDPKYSPDGRFIAYKVQA
                     KPGHESDRFRLAVYDRQTKTRKVLTEAIDNWVDGFQWSADGKALWFTVQEQGRWPLYR
                     MEVATGKATRMLEGLSIKEFVVSPDQKAVYLTKTRVGEPVEVWRHAFEPKGLSRLTSF
                     NQAVAEEVDIRPAEEQWVKGADGRDIHVFLVKPHGFDPAKKYPVILNVHGGPQMMWSD
                     TLRGDWQVYPGAGYIVAFPNPHGSTGYGQAFTDAISGDWDGKVMTDIEKVADHLAALP
                     YVDKDRMGAMGWSWGGYAMMWLEGHTTRFKALAAMMGVYDLRSMHGATEELWFPEHDL
                     TGTPWDQAAAYDRMNPSSHVKAFKTPCLVITGERDYRVPYTQSLQFFTGLQEMGVPSR
                     LLVFKNDGHWPDNLKSMPVYYNAHLEWFQKYLGGGGAPWKTEDMVRNLVFEKAPQSAP
                     AAASPKPEPAAAPEAAPKAAAAPVAQAAPAPAPGAPKGPVSLAKNGHAAIGADKCRMC
                     HRVQHDSWSATAHAKKGLDCEACHGNGADYKAMPVMKNPAAAKAAGLVTPTLDFCRKC
                     HGAKADAALFARAHAHKAK"
BASE COUNT          390 a          777 c          732 g          299 t
ORIGIN      
        1 aagcgggcgt gggtgcgccg aaggtgctgc cggggaacaa ggtggtgttc gagacctcgg
       61 tgtttccaga ggccatgacg gacggtgtta agcagaagga gctggcggac aagctggaga
      121 gcggcccggt gcaggcccac ctggcggatt cactgctcta ccgccactgg accgactggc
      181 gcgacttcca gtacagccac ctcttctcgg ccaccttcga gggcaaggtc gaggcgctga
      241 cctcgggcaa gcaggactac ccgggcttct ggcagagctg ggacctgagc cccgatggcc
      301 gggagatctg cgtcaccacc aacaccgacg cggtgccggc ccgcagtacg aacaacgacc
      361 tcttcctcat ctccctggag ggcgaccgtg cgccccgccg catcaccggg gacaatccgg
      421 cctcggacag cgacccgaag tattcgcccg acggccgctt tatcgcctac aaggtgcagg
      481 cgaagccggg ccacgaatcc gaccggttcc gcctcgccgt ctatgaccgg cagacgaaga
      541 cccgcaaagt gctcaccgaa gccatcgaca actgggtgga tggcttccag tggtccgcgg
      601 acggcaaggc cctctggttc accgtgcagg agcagggccg ctggccgctg taccgcatgg
      661 aggtggccac cgggaaggcc acccgcatgc tcgaaggcct gagcatcaag gagttcgtgg
      721 tcagccccga ccagaaggcg gtctacctca ccaagacccg cgtgggcgag ccggtggagg
      781 tctggcgcca tgccttcgag ccgaaaggcc tgtcgcgcct gacctcgttc aaccaggcgg
      841 tggctgaaga ggtggacatc cgccccgccg aggagcagtg ggtgaagggc gccgacggca
      901 gggacatcca cgtcttcctg gtgaagcccc acggcttcga tcccgccaag aagtacccgg
      961 tgatcctcaa cgtccacggc ggcccgcaga tgatgtggtc cgacacgctg cgaggcgact
     1021 ggcaggtgta tcccggcgca ggctacatcg tggccttccc gaatccccac gggtccaccg
     1081 gctacggcca ggccttcacg gacgccatca gcggcgactg ggacggcaag gtgatgacgg
     1141 acatcgagaa ggtcgccgac cacctggcgg cgctgcccta cgtggacaag gaccgcatgg
     1201 gcgccatggg ctggagctgg ggcggctacg ccatgatgtg gctggagggc cacaccacgc
     1261 gcttcaaggc gctggccgcc atgatgggcg tctacgacct gcgctccatg cacggcgcca
     1321 ccgaggagct gtggttcccg gagcatgacc tcacgggcac gccctgggac caggccgccg
     1381 cctatgaccg catgaacccc agcagccatg tgaaggcctt caagacgccc tgcctcgtca
     1441 tcaccggcga gcgggactac cgcgtgccct acacccagag cctgcagttt ttcacgggcc
     1501 tgcaggagat gggcgtgccc agccggctgc tggtcttcaa gaacgacggc cactggccgg
     1561 acaacctgaa gtccatgccc gtctactaca acgcccacct cgagtggttc cagaagtacc
     1621 tgggcggcgg cggcgccccc tggaagaccg aggacatggt gcggaatctg gtcttcgaga
     1681 aggcgcccca gtccgctccg gcggccgcct ctccgaagcc ggagcctgcc gcggcccctg
     1741 aggccgcgcc caaggccgcg gcggcgccgg tggcgcaagc cgcgccggca ccggcccccg
     1801 gggcaccgaa gggccccgtg tccctcgcca agaacggcca cgccgccatc ggggccgaca
     1861 agtgccgcat gtgccaccgg gtccagcacg actcctggtc cgccaccgcg cacgccaaga
     1921 agggcctcga ctgcgaggcc tgccacggca acggcgcgga ctacaaggcg atgcccgtga
     1981 tgaagaatcc cgcggcggcg aaagccgcgg gcctcgtcac ccccaccctc gacttctgcc
     2041 ggaagtgcca cggcgcgaag gccgacgcgg ccctcttcgc ccgggcgcac gcccacaagg
     2101 cgaagtagcg gatcagggtt tggcgccctt cagcttccag tagcttcccc cgcctgcctg
     2161 gcgcggctcc agcccgcggc gggcggcgcg gagcccat
//
LOCUS       DASUDT010000127        13414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_470591, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000127 DASUDT010000000
VERSION     DASUDT010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 13414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13414
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470591"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VFV26_02655"
     CDS             <1..423
                     /locus_tag="VFV26_02655"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4845090.1"
                     /translation="TPDEQPGYYAMLANIGQFSERPGAKVLVAVSAEGQLMGGVVYFG
                     DMAQYGSGGAATAVAHASGIRLLGVDARYRGLGVGRALTSACIQRARDEGHAEVILHT
                     TEAMRIAWGLYERLGFERSPDLDFIQGALPVFGFRLSL"
     gene            complement(407..2053)
                     /locus_tag="VFV26_02660"
     CDS             complement(407..2053)
                     /locus_tag="VFV26_02660"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4845091.1"
                     /translation="MSFWRVRIRPLAWLRSVHAKLFLLLGLVTSMLTIAVAYSITRNF
                     RRELEVYSRNLVIEAAGTVETDIVERDPAFRDPEKLDQVLDSIAGPDRSIFQIDVFKR
                     VGRGSEVELVRSSGDESTVDWGPEIGSYLSLPRAQAELVALNTGGRAWKVYQPIRSHR
                     PGQPPLGLVRAYCDLERWEVVWDNNLKRTLHILPGVLLGEFILLWLILRMLISDPIEA
                     TVLAMEQLERGESGARVTIRRSDELGLIAAQFNGMAVQLQRAGEERETLIREVRGLNA
                     SLQDRIDAALSELQAKNAELAAMAERNALLREELGAQERLAVAGQLTATFAHEVGTPL
                     NLVNGHLQLLEGRKDLPEKVRDRLGVIHAQIQRVSGIVRRMLDLTRRPQLDRKPQPFA
                     ELIKDLQHLWTPTLAAHGITVAARAPSDCCLDVDRKQMEQLFLNLMNNAVDAMPGGGT
                     VQLKARPAEESTPNGPWWELRFQDSGQGIPADLLGQVFRPMFTTKPEGKGTGLGLSIC
                     REIVRGHGGEIRIESTEGAGTTVVFTLPGATPASGVTGKA"
     gene            complement(2050..2961)
                     /locus_tag="VFV26_02665"
     CDS             complement(2050..2961)
                     /locus_tag="VFV26_02665"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX4845092.1"
                     /translation="MHPAELAILLHRALEVRLAGLQGLLAAEGWAEDMEQLHQVRVSA
                     RRLGAVLDLVDPEAYPGHKGQRRALKRLVEILGLPRELDVHADQLARHRQAAAAPAQG
                     AVLEHLLERVDHARAKARRAMREALEDLRLPDLRKLLEVPSLPEPFQRASLQEAAWAC
                     LEPRAEAALGDLAALAAQEDTPALHKARVRIKKLRYAVEALEGAFAAVPEAPLQALRT
                     LQTALGEHHDLAALEALLWEEEGRLRARDRATLAAGVLELLGEVAEARRVAFGRFITA
                     AGGLDPAAFAREVLPALGLPLPGAGPR"
     gene            3249..6080
                     /gene="uvrA"
                     /locus_tag="VFV26_02670"
     CDS             3249..6080
                     /gene="uvrA"
                     /locus_tag="VFV26_02670"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX4845093.1"
                     /translation="MEHIHIKGAREHNLKNLDLSLPRNQLVVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLDQMEKPDVDSIEGLSPAISIEQKTTSKNPRSTVATVT
                     EIYDYLRLLFARTGKPTCVACGDPIASQTIQEMADQILARPEGTKLQILAPVVRGRKG
                     EYKKLLQDLMKRGYIRARVNGTMLDLTEGIPDLDKQKKHTLEVVIDRLKVSPAIQSRL
                     ADSLEIACNLAEGSALVDLDGTEQLFSSKLACNNQKCAKFGQGLPELEPRSFSFNSPY
                     GACPTCDGLGFKRQFAEELIVPNPALSISEGAIQASGWKSVSEDGWRSQMLDQLARKA
                     KFSLDTPWKKLPAEIRRLLLHGTDKEMRFTYENKKNRYDFVHHFEGIVGNLERRYRET
                     TSEEIRAELEESMRVIPCEACGGQRLKPEVLAVYVGGLHIAQVSAQSVREARTWFTDL
                     ALEGKDAVIAEKVLKEIRERLGFLDDVGLGYLTLDRSAATLSGGEGQRIRLATQIGSK
                     LQGVLYVLDEPSIGLHQRDNQKLLKTLMDMRDLGNTVLVVEHDLETILAADHVVDMGP
                     GAGEHGGMVVAQGTPDDIRRTLGSITGDFLSGRDSIPVPRKRRKAERGYLSIIGAEEN
                     NLKKVDADFPIGIFTCVTGVSGSGKSTLVNEILYKALANQLHQGVHVVGKHKAIKGLE
                     AVDKVIDIDQAPIGRTPRSNPATYTGLFTPLRELFAQLPESKARGYAPGRYSFNVKGG
                     RCEKCEGDGLLKIEMHFLPDVYVTCEQCKGKRYNRETLEIHYKGKSISEVLAMTVEEA
                     LELFAPIPVLANKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLAKELSKRATGRTVY
                     ILDEPTTGLHLKDIQKLLEVVNRLVETGNTLIVIEHNLDVIKTADWILDLGPEGGGEG
                     GRIIAVGTPEEVARKKASITGKYLAPYLK"
     gene            complement(6081..6254)
                     /locus_tag="VFV26_02675"
     CDS             complement(6081..6254)
                     /locus_tag="VFV26_02675"
                     /inference="COORDINATES: protein motif:HMM:NF025436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HEX4845094.1"
                     /translation="MNITPASAVAASQLKTQTELATRVLKKVLDTNTQQGADLANLIA
                     QAGGVGQRIDLYA"
     gene            complement(6272..6523)
                     /gene="csrA"
                     /locus_tag="VFV26_02680"
     CDS             complement(6272..6523)
                     /gene="csrA"
                     /locus_tag="VFV26_02680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HEX4845095.1"
                     /translation="MLVITRKPEQSIVIGGEVEVIVLGVTKDGVRLGIKAPRSVQVHR
                     REVFEAIAAENLAATAAKAPVQDAAALIRTAHVRKPESR"
     gene            complement(6536..6958)
                     /locus_tag="VFV26_02685"
     CDS             complement(6536..6958)
                     /locus_tag="VFV26_02685"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HEX4845096.1"
                     /translation="MTPTPAPTPGPDEGILLTFPKGLLGFPQLTAFRLFEPTDGYPLK
                     FLQSTETPEISFTCIDPAGIKEDYEVPLGEEEAEALGLENPGDAMVLTLVVIPEDPRR
                     MTTNLAGPLVMNVKTRIGFQIALNADRFPLRFPILPLD"
     gene            complement(6955..7902)
                     /locus_tag="VFV26_02690"
     CDS             complement(6955..7902)
                     /locus_tag="VFV26_02690"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845097.1"
                     /translation="MALDHFDLPTTFVDTPEKLQEALPLWHSAGVLSVDIECSLTGMH
                     HCVLALMQVATHDQAWLVDPLALEGLMRPALQAMAQVPWIVHDFSGDGIVFKRLYDVV
                     PDSIFDTMLLSRALGYPQPGLKTMAKLKLGLDIPKEEQDSNWMLRPLREAQISYASRD
                     AALLLPLLRILADEADGLRDHPEIGPRLASLPKEMRHLLKRVRAYVPPKHDPVVDKIR
                     HLGDLAVERAKVLTSYRWAWGNEGDVAAVMELGNRWITARLAHPPATKEALERTIPNP
                     RFRRKRLDALWAVFEEGPHETQDDGDSSDGLIWNNSGRP"
     gene            7958..8227
                     /locus_tag="VFV26_02695"
     CDS             7958..8227
                     /locus_tag="VFV26_02695"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HEX4845098.1"
                     /translation="MNRSLFWTTFATVFLAEVGDKTQLAAMTATVRSGQIWTVFLAAS
                     AALVCATAIGVALGGVLFRYIPESAIKWAAGTAFIAVGLWVLIKG"
     gene            complement(8228..9403)
                     /locus_tag="VFV26_02700"
     CDS             complement(8228..9403)
                     /locus_tag="VFV26_02700"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX4845099.1"
                     /translation="MPFLIALVLIFLVQWLHLRLLRLELPALRRWLPWALGLIHIPLL
                     LFAGLRLLAAGDHGALPLLRALARAGFYFQAFTVLHLLAGMAAQGVWRFRRRRMAAPP
                     AEAVDPSRRAFLRSAALASTGAAVALGMGGARQAYGDPGITRRDLAFSDLPGGLDGLR
                     LAHLSDLHAGPMIGSDILRRWRDLTERERPDLLLFTGDLVDSRPEELAPLLEAFRAFP
                     APFGAFAVLGNHDYFDDPRPIWRDLETAGIRCLENTSALVRRGGDTLAVLGLQDPMAR
                     NGRFRRVLYGPGPRPAEAARDLPAEAFRICLNHRPSEWEQALEARARLTLSGHTHGGQ
                     INPIPGFSSAHLIGPRTQGLFREGDDLLYVSRGLGVVGLPIRIAAPPEIAILTLRRG"
     gene            complement(9423..12053)
                     /locus_tag="VFV26_02705"
     CDS             complement(9423..12053)
                     /locus_tag="VFV26_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845100.1"
                     /translation="MALRTPPSRILAPALALLPALVQAAPPRIQAPDAPWLTFTTAHY
                     RVHCPAAFEAFGREVAGRVEGIHAQYLGLVGFTYEQPIDILILDPVMEANGMAFPLFP
                     RPHVVLWKTEPEPDSAIGHHRGWAELLVVHELGHMHHLLRPARKQNPWQRWTAVLGPL
                     TEKSPRWVTEGYATLIEGRLTGSGRPHSALRASVLRQWALEGKLPTYEALSGTGGFLG
                     GSMAYLGGSAYLEWLEAKAGDPKVFQTLWTRLAGKRDFEAAFRATFGFGPKDGYQRYC
                     AELTHTALELERRVKAEGLREAEAGAEAHRRAKRDGPQGAAQEGLREGQLVTQLKGWA
                     TDLALSPDGSKLMARVLDPKKPGLYVWDLKATPKSIQAQPGEPADHPPLQPVLPPVRR
                     LGPVHGALPWKPVWTGPEVLAFQLRLPNPEGVLTPQAEQWHLGQGLKRLPEPAKAPAP
                     GAITWREVDGIWNLVDARGRSLTRTLAAAWNPVATPDGKWIYYTQLSATGLQIRRLDA
                     TLPPLEPRPLPQDPGALVPNQVLPKADEPSPLPAPVPVEPHPYRVGESHDTFSIVGYS
                     ATPSGFSAQIGVGGNDVLHRLNWQALAGLGDGAGPRGGMAGLAWRGWRWAPSLQAFSV
                     LERPTSQRFAPVAGFDRERRGAELAFTREDLGRPWTYLRPVAAFERVASGGGTALSRA
                     LWGLETSLGNAWSRDGQGLRAALAAREQRGRTEGRTWNLTRATLTLGWINPWAPLTLH
                     AEDGRITGDPTALDRFHLGGVGTSLLPTALDANRVVQAALPAYTATGNRLRRLRGDLG
                     LGPFQAYLEHAAVWQDRAPRASAQRVAGLELDSRHLGLPLDVLRRLTGNLSFSLGLHR
                     PLDGAMKGRTVGTLSVIVRP"
     gene            12165..13100
                     /locus_tag="VFV26_02710"
     CDS             12165..13100
                     /locus_tag="VFV26_02710"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEX4845101.1"
                     /translation="MATLLLVPALLGGEAVVPGLDRKVLAMGTELSLHLEGPGDLHGA
                     SEAALAEAIRLETACSTWDPASAWSRLNAAGGRPVALDREWIALLDRVKAWQSRTDGA
                     FDPVLMALVRAWGLREGGRVPGSARLAQARRASGSGLLELDVAAGTARLAHPEAGVEE
                     GAFLKGHALDRMKAAAGTPAGLLDFGGQLLAWGRAVPVSVADPLDRQRPRLTLLLRNA
                     SLASSGSSERGRHLLDPRSGQLCPAWGSVAAVAAEGLEADLLSTALYVMGPEAGPAWA
                     ERHGAAAAFLLNDGSLRMSRAFRSLHPTLIPQESR"
     gene            13097..>13414
                     /locus_tag="VFV26_02715"
     CDS             13097..>13414
                     /locus_tag="VFV26_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845102.1"
                     /translation="MKSLLTPLMCALLAAPAFAQEKPDADQRIAELERRLNAMSQELE
                     AQKTGTAMPVAGEAGHFGMAPAASKVYGSKGGLSIGGYGEMLYENFDSKLQNGTYSSK
                     ANTI"
BASE COUNT         2074 a         4481 c         4890 g         1969 t
ORIGIN      
        1 accccggacg agcagccggg gtactacgcg atgctggcca acatcggaca gttctcggaa
       61 agacccggcg ccaaggtgct cgtggcggtt tccgcggagg gtcagctgat gggcggggtg
      121 gtctacttcg gagacatggc ccagtacggc tcgggaggcg cggcgacggc cgttgcgcac
      181 gcctccggca tccggctgct gggggtggac gcccggtacc ggggcctggg ggtcggcagg
      241 gccctgacca gcgcctgcat ccagcgggcg agggacgagg gccacgccga ggtcatcctg
      301 cataccaccg aggccatgcg gatcgcctgg ggcctctacg agcggctggg cttcgaacgg
      361 tcgccggacc tggatttcat ccagggcgcg ctgccggtct tcggcttcag gctttccctg
      421 taacgccgga ggccggcgtt gctcccggca gggtgaagac cacggtggtg ccggcgccct
      481 cggtgctttc gatgcggatc tcgccgccgt gtccgcggac gatctcgcgg cagatgctga
      541 ggcccaagcc ggtgcccttg ccctcgggct tggtggtgaa catggggcgg aagacctggc
      601 cgaggagatc cgcggggatg ccctggccgg aatcctggaa gcgcagctcc caccaggggc
      661 cgttgggggt gctttcctcg gcgggccggg ccttgagctg cacggtgccg ccgccgggca
      721 tggcgtccac ggcgttgttc atgaggttca ggaagagctg ctccatctgc ttccggtcca
      781 catcgaggca gcagtccgaa ggggcccggg ccgccacggt aatgccatgg gccgcgaggg
      841 tgggggtcca caggtgctgg agatccttga tgagctccgc gaaaggctgc ggcttccggt
      901 ccagctgggg gcggcgggtc aggtccagca tgcggcgcac gatgccgctc acccgctgga
      961 tctgggcatg gatgacaccc aggcggtcgc gcaccttttc gggcagatcc ttccgtccct
     1021 ccaggagctg gagatggccg ttgacgaggt tgaggggcgt ccccacctca tgggcgaagg
     1081 tggcggtgag ctggccggcg acggcgagcc gctcctgggc gcccagctcc tcgcgcagca
     1141 gggcgttgcg ttcggccatg gccgccagtt cagcattctt ggcctggagt tccgacaggg
     1201 cggcgtcgat gcggtcctgg aggctggcgt tgaggccccg gacctcccgg atgagggttt
     1261 cgcgctcttc gccggcccgc tggagctgga ccgccatgcc attgaactgg gccgcgatga
     1321 ggcccagctc gtcgctgcgc cggatggtca cccgggcgcc ggactcgccg cgctccagct
     1381 gctccatggc cagcaccgtg gcctcgatgg gatcgctgat gagcatgcgc aggatgagcc
     1441 agaggaggat gaactcgccc aggaggacgc cgggaaggat gtgcagggtg cgcttcaggt
     1501 tgttgtccca gaccacctcc cagcgctcca gatcgcagta ggcgcggacg aggcccaggg
     1561 gcggctggcc cgggcgatgg ctccggatgg gctggtagac cttccaggcg cggccgccgg
     1621 tgttcagggc caccagttcc gcctgggccc tgggcaggga caggtacgag ccgatctccg
     1681 gcccccagtc cacggtcgat tcgtcgccgg aggagcgcac cagctccacc tcgctgcctc
     1741 tgcccacccg cttgaagaca tcgatctgga agatgctgcg gtcgggcccc gcgatgctgt
     1801 ccaacacctg gtcgagcttc tccggatccc ggaaggcggg gtcccgctcc acgatgtccg
     1861 tttccacggt gcccgcggct tcgatcacca ggttcctgga atagacctcc agctcgcggc
     1921 ggaagttgcg ggtgatggag taggccacgg cgatggtgag catgctggtg acgaggccca
     1981 gcaggaggaa gagcttggcg tgcacgctgc gcagccaggc cagggggcgg atccgcacgc
     2041 gccagaagct catcggggcc ccgctcccgg caggggcagc cccagggcgg ggaggacctc
     2101 ccgggcgaag gccgccggat ccaggccccc ggcggcggtg atgaagcgac caaaggccac
     2161 gcggcgggcc tcggccacct cgcccagcag ttcgagcacc ccagcggcga gggtggcgcg
     2221 gtcccgggcg cggagccggc cctcctcctc ccagagcagg gcctccaggg ccgcgaggtc
     2281 atggtgctcc cccagggccg tctggagggt gcgcagggcc tggagcgggg cctcgggcac
     2341 ggcggcgaag gcgccttcca gggcctccac ggcgtagcgg agcttcttga tgcgcacccg
     2401 ggccttgtgg agggcgggcg tatcctcctg ggcggcgagg gcggcgagat cccccagggc
     2461 ggcctcggcc cggggttcca ggcaggccca ggcggcctcc tggagcgagg cgcgctggaa
     2521 gggttcgggc aggctgggca cctccagcag cttccggagg tccggcaggc gcaggtcttc
     2581 gagcgcttcg cgcatggcgc ggcgggcctt ggcgcgggcg tggtccacac gctccagcag
     2641 atgctccagc acggcgccct gggcgggtgc ggccgccgcc tggcggtgcc gggccagctg
     2701 gtccgcatgg acatcgagtt cgcggggcag gcccaggatc tccaccaggc gcttcagggc
     2761 ccgccgctgg cccttgtggc cggggtaggc ctccgggtcc accagatcca gcaccgcccc
     2821 caagcgccgg gcggaaaccc gcacctggtg cagctgttcc atgtcctcgg cccagccttc
     2881 ggcggccagc agcccctgaa gccccgcgag acggacctcc agggcgcggt ggagcaggat
     2941 cgccagctcg gctggatgca tcagatgatt ttaggtgtcg tttcgaaata accagcgctt
     3001 ttctggttgt ttcgctagga caccttatgt cgccccttcc acgtgggcga cgcgacgcaa
     3061 tctggggtgg cgacctaagc gcaattcgca gaagcgaaaa attggcgtaa tctggaaggt
     3121 ctatggaaca cattcacatc aagggtgccc gcgagcacaa ccgaggctcc gtctccgcga
     3181 acgagcggag cgagtgagtg ggagtgcgcg acttgatgtc gcgcgcgata gacggagaga
     3241 accgaccgat ggaacacatc catatcaagg gcgccaggga gcacaacctc aagaacctgg
     3301 acctcagcct gccgcgcaac cagctggtgg tgatcacggg cctgtcgggc tcgggcaagt
     3361 ccagcctcgc cttcgacacg ctctacgccg aagggcagcg gcgctacgtg gagagcctgt
     3421 cggcctacgc ccggcagttc ctggaccaga tggaaaagcc cgatgtggac agcatcgagg
     3481 gcctgtcccc ggccatctcc atcgagcaga agaccaccag caagaacccc cgctccaccg
     3541 tggccacggt gacggagatc tacgactacc tgcgcctgct cttcgcccgc acgggcaagc
     3601 ccacctgcgt ggcctgcggc gatcccatcg ccagccagac catccaggag atggcggacc
     3661 agatcctggc ccggcccgag ggcacgaagc tgcagatcct ggcccccgtg gtgcggggcc
     3721 gcaagggcga gtacaagaag ctgctccagg acctcatgaa gcgcggctac atccgggccc
     3781 gcgtgaacgg cacgatgctc gacctcaccg agggcattcc cgatctcgac aagcagaaga
     3841 agcacaccct ggaggtggtc atcgaccgcc tcaaggtgag ccccgccatc cagtcaaggc
     3901 tggcggacag tctggaaatc gcctgcaacc tcgccgaggg cagcgccctc gtggatctgg
     3961 acggaacgga gcagctcttt tccagcaagc tggcctgcaa caaccagaag tgcgcgaagt
     4021 tcggccaggg cctgccggag ctggaaccac gctccttctc gttcaacagc ccctacgggg
     4081 cctgtcccac ctgcgacggc ctgggcttca agcgccagtt cgcggaggag ctgatcgtcc
     4141 ccaatccggc cctctccatc agcgaaggcg ccatccaggc cagcggctgg aagagcgtct
     4201 ccgaggatgg ctggcgctcg cagatgctgg accagctggc ccgcaaggcg aagttcagcc
     4261 tggacacgcc ctggaagaag ctccccgcgg agatccgccg cctgctgctg cacggcaccg
     4321 acaaggagat gcgcttcacc tacgagaaca agaagaaccg ctacgacttc gtccaccact
     4381 tcgaaggcat cgtgggcaac ctggagcgcc gctaccggga gaccaccagc gaggagatcc
     4441 gcgcggagct ggaggagtcc atgcgcgtca tcccctgcga ggcctgcggg gggcagcggc
     4501 tcaagcccga ggtgctcgcg gtctacgtgg gcgggctgca catcgcccag gtgtcggcgc
     4561 agagcgtccg cgaggcccgg acctggttca cggacctggc gctggaaggc aaggacgcgg
     4621 tcatcgccga gaaggtgctg aaggagatcc gcgagcggct gggcttcctg gacgacgtgg
     4681 gcctgggcta cctgacgctg gaccgcagcg cggccacgct gtccggcggc gaaggccagc
     4741 gcatccgcct ggccacgcag atcggctcca agctccaggg tgtcctgtac gtgctggacg
     4801 agcccagcat cggcctgcac cagcgggaca accagaagct gctcaagacc ctcatggaca
     4861 tgcgggacct gggcaatacg gtgctggtgg tggagcacga ccttgaaacg atcctggcgg
     4921 cggatcacgt ggtggacatg ggaccgggag cgggcgagca cggcggcatg gtggtggccc
     4981 agggcacgcc ggacgacatc cgccgcacac tgggttccat caccggtgat ttcctgtcag
     5041 ggcgggattc catcccagta ccccgcaagc gccgcaaggc cgagcgcggg tacctgtcca
     5101 tcatcggcgc cgaggagaac aacctcaaga aggtggacgc ggatttcccc atcggcatct
     5161 tcacctgcgt cacgggcgtg agcggttcgg gcaagagcac cctggtgaac gagatcctct
     5221 acaaggccct cgccaaccag ctgcaccagg gcgtccacgt ggtggggaag cacaaggcca
     5281 tcaagggcct cgaagccgtg gacaaggtca ttgacatcga ccaggccccc atcggccgca
     5341 cgccccgcag caaccccgcc acctatacgg gcctcttcac gcccctgcgg gagctgttcg
     5401 cccagctgcc ggagagcaag gcccgcggct acgcgccggg ccgctacagc ttcaacgtga
     5461 aggggggccg ctgcgagaag tgcgaaggcg atggcctcct caagatcgaa atgcacttcc
     5521 tcccggatgt ctacgtcacc tgcgagcagt gcaagggcaa gcgctacaac cgcgagacgc
     5581 tggagatcca ctacaagggc aagagcatct ccgaggtgct ggccatgacc gtggaggagg
     5641 ccctggagct cttcgcgccc atccccgtgc tggccaacaa gctgcagacc ctcatggacg
     5701 tgggcctggg ctacatccgc ctggggcaga gcgccacgac gctgtcgggc ggcgaggccc
     5761 agcgcgtgaa gctggccaag gaactgagca agcgggccac gggacgcacg gtctacatcc
     5821 tggacgagcc caccacgggc ctgcacctca aggacatcca gaagctgctg gaggtggtga
     5881 accggctggt ggagacgggc aacaccctca tcgtcatcga gcacaacctc gacgtcatca
     5941 agaccgcgga ctggatcctg gacctgggcc ccgaaggcgg cggggaagga ggccgcatca
     6001 ttgccgtggg cacccccgag gaggtggcca ggaagaaggc cagcatcacc gggaaatacc
     6061 tggcgccgta cctgaagtag ctaggcgtag aggtcgatcc gctgtcccac gccgccggcc
     6121 tgggcgatca ggttcgccag gtcggcgccc tgctgggtgt tcgtgtccag caccttcttg
     6181 agcacgcggg tggcgagctc ggtctgggtc ttgagctggc tggcggcaac ggcgctggcg
     6241 ggggtgatgt tcatgggacc tcgacaggag cctatcggct ttcgggcttc cggacatgag
     6301 cggtccggat gagggcggcc gcatcctgga cgggcgcctt ggccgccgtg gcggcgaggt
     6361 tttcggcggc gatggcctca aagacttcgc ggcgatggac ttgcacgctg cggggggcct
     6421 tgatgcccag gcggacgccg tccttggtga cgccgaggac gatgacctcg acctcgccgc
     6481 cgatgacgat ggactgctcc ggctttctcg tgatgacgag catagggcga gggtatcagt
     6541 ccaagggaag gatcgggaac cgcaggggga accggtcggc gttgagggcg atctggaaac
     6601 cgatccgggt cttcacgttc atcaccaggg ggccggccag gttggtggtc atgcgccggg
     6661 ggtcctccgg aatcaccacc agggtgagca ccatggcgtc gcccggattc tcgaggccga
     6721 gggcttcggc ctcctcctcg cccaggggca cctcgtaatc ctccttgatg cccgcgggat
     6781 cgatgcaggt gaaggagatc tccggggtct cggtggactg gaggaatttc aggggatagc
     6841 cgtccgtggg ctcgaagagc cggaaggccg tcagctgggg gaaacccagg agccccttgg
     6901 ggaaggtgag gagaatgccc tcgtcggggc cgggggtggg agctggcgtg ggggtcatgg
     6961 ccgtccagag ttgttccaga tcaatccatc ggatgaatcg ccatcgtcct gagtttcatg
     7021 cgggccctct tcgaagacgg cccagagggc gtccaggcgc ttgcgccgga agcgcggatt
     7081 ggggatggtg cgctccaggg cctccttggt ggcgggcgga tgggccagcc gggcggtgat
     7141 ccagcggttg cccagctcca tgaccgcggc cacgtcgccc tcgttgcccc aggcccagcg
     7201 gtagctggtg agcaccttgg cccgctccac ggccagatcg cccaggtgcc ggatcttgtc
     7261 caccacgggg tcgtgcttgg ggggcacgta ggcccgcacg cgcttcagca ggtggcgcat
     7321 ctccttgggc aggctggcca ggcgggggcc gatctccggg tggtcccgca ggccgtcggc
     7381 ctcgtccgcc agaatgcgca gcaggggcag cagcagcgcc gcatcccggc tcgcgtagct
     7441 gatctgggct tcgcgcaggg gccgcagcat ccagttggaa tcctgctcct ccttggggat
     7501 gtcgaggccg agcttgagct tggccatggt cttgaggccc ggctgggggt agcccagggc
     7561 gcgggacagc agcatggtgt cgaagatgct gtcgggcacc acgtcataga gacgcttgaa
     7621 gacgatgccg tcgccggaga agtcgtggac gatccagggc acctgggcca tggcctgcag
     7681 ggcgggccgc atgaggccct ccagggccag cggatccacc agccaggcct gatcgtgggt
     7741 ggccacctgc atgagcgcca gcacgcagtg gtgcatgccc gtgaggctgc actcgatgtc
     7801 cacggagagc acgcccgcgg aatgccacag gggcagcgcc tcctgcagct tctcgggtgt
     7861 gtccacgaag gtcgtgggaa ggtcgaagtg gtcaagcgcc atccggccag tatggcagtc
     7921 cggtaccatg aaccttcgtc acgatatgcg aggccccatg aaccgctccc tcttctggac
     7981 cacctttgcc accgtcttcc tcgcggaggt gggcgacaag acgcagctgg cggccatgac
     8041 cgccacggtg cgcagcggcc agatctggac cgtgttcctg gcggccagcg ccgccctggt
     8101 gtgcgccacg gccatcggcg tggccctggg cggcgtgctg ttccgctaca tccccgagtc
     8161 cgccatcaag tgggccgcgg ggacggcctt catcgcggtg gggttgtggg tgctcatcaa
     8221 gggctgatca gccgcgcctc agcgtgagga tggcgatctc cggcggggcg gcgatgcgga
     8281 tgggaaggcc caccacaccg aggccgcggc tcacgtagag caggtcgtct ccttcgcgga
     8341 agagcccctg cgtgcggggg ccgatgaggt gggcgctgct gaagccgggg atggggttga
     8401 tctggccgcc gtgggtgtgg cccgacaggg tgagccgcgc cctcgcctcc agggcctgct
     8461 cccactcgct gggccggtgg ttcaggcaga tgcggaaggc ctccgccggc aggtcccggg
     8521 cggcctcggc gggcctgggg ccggggccgt agagcacccg gcggaagcgg ccgttccgcg
     8581 ccatggggtc ctggaggccc agcacggcca gggtgtcgcc cccccgccgc accagggccg
     8641 acgtgttttc cagacagcgg atcccggcgg tttccagatc ccgccagatg ggccgcgggt
     8701 catcgaagta gtcgtggttg cccagcacgg cgaaggctcc gaagggggcc gggaaggcgc
     8761 ggaaggcttc cagcagcggg gccagttctt ccggtcggct gtccacgagg tcgccggtga
     8821 agagcagcag gtcgggccgt tcccgttccg tcagatcccg ccaccggcgc aggatgtcac
     8881 tgccgatcat gggccccgca tggaggtcgc tgaggtgggc gaggcgcagt ccatcgaggc
     8941 ctccgggcag gtcggagaag gcgaggtcgc gccgggtgat gccgggatcc ccgtaggcct
     9001 gccgggcacc ccccatgccc agggccacgg cggccccggt gctggccagg gcggcgctgc
     9061 gcaggaaggc ccggcggctg ggatccacgg cttcggcggg gggggccgcc atccttcgcc
     9121 tccggaagcg ccagactccc tgggccgcca tgcccgccag caggtgcagc accgtgaagg
     9181 cctggaagta gaacccggcc cgcgccaggg cccgcagcag gggcagggcg ccgtgatcgc
     9241 cggcggccag gaggcggagg cccgcgaaga gcagcagggg gatgtggatc aggcccaggg
     9301 cccagggcag ccagcggcgc agggccggca gctccaggcg cagcagtcgc aggtgcagcc
     9361 actggaccag gaagatgagg acaagcgcga tgaggaaggg catcaggatc cggggaggga
     9421 catcaggggc ggacgatcac gctgagggtt cccacagtac ggcccttcat ggccccgtcc
     9481 aaggggcggt gcaggcccag ggagaaagag aggttgccgg tcagccggcg cagcacgtcc
     9541 aggggcaggc ccaggtggcg gctgtccagt tcgagacccg ccacccgctg ggccgatgcc
     9601 cgcggagcgc ggtcctgcca gacggcggcg tgctccaggt aggcctggaa gggccccagg
     9661 cccagatcgc cccgcagccg ccggaggcgg ttgcccgtgg ccgtgtaggc gggcagggcc
     9721 gcctggacca cccggttggc gtccagggcc gtgggcagca gggaggtgcc cacgccgccc
     9781 aggtggaagc ggtccagggc cgtgggatcg cccgtgatgc ggccatcttc ggcatggagg
     9841 gtgaggggcg cccaggggtt gatccaaccc agggtgaggg tggcgcgggt caggttccag
     9901 gtcctcccct ccgtgcggcc ccgctgctcc cgggccgcca gggccgcccg gaggccctgc
     9961 ccgtcccggc tccaggcgtt gcccaggctg gtttccaggc cccagagggc gcggctgagg
    10021 gcggttccgc ccccggatgc cacgcgctcg aaggcggcca cggggcgcag gtaggtccag
    10081 ggccggccca ggtcctcccg ggtgaaggcc agctcggcgc cccggcgctc ccggtcgaag
    10141 cccgccacgg gggcgaagcg ctggctcgtg gggcgctcca gaacggagaa ggcctgaagg
    10201 gagggcgccc agcgccagcc ccgccaggcg aggccggcca tgccgccgcg gggccccgcg
    10261 ccgtccccca ggcccgccag tgcctgccag ttcaggcgat ggaggacgtc gttgccgcct
    10321 acgccgatct gggcgctgaa gcccgagggg gtcgcgctgt agcccacgat ggaaaaggtg
    10381 tcgtggctct cgcccacgcg gtagggatgg ggttccacgg gcaccggcgc cggaaggggg
    10441 ctgggttcgt cggccttcgg cagcacctgg ttcgggacca gggcccccgg atcctgcgga
    10501 agcggcctgg gctccagggg cggcagagtg gcgtcgaggc ggcggatctg caggcccgtg
    10561 gcgctcagct gggtgtagta gatccacttg ccgtccggcg tggccaccgg attccaggcc
    10621 gccgccaggg tgcgcgtgag cgaccgtccc cgggcgtcca ccaggttcca gatgccgtcc
    10681 acctcccgcc aggtgatggc gcccggggcg ggcgccttcg cgggttccgg gaggcgcttg
    10741 agcccctggc ccaggtgcca ttgctccgcc tggggcgtca gcacgccctc cgggttgggc
    10801 aggcgcagct ggaaggccag gacctccggc ccggtccaga caggtttcca gggaagggcc
    10861 ccgtggaccg ggcccaggcg gcggacgggg ggcaggacag gttgcagggg cggatggtcc
    10921 gcgggttcac cgggctgggc ctggatggat ttgggcgtgg ccttcaggtc ccagacgtag
    10981 aggccgggct tcttcgggtc cagcacccgg gccatgagct tggacccgtc cggactcaaa
    11041 gccaggtccg tcgcccagcc cttcagctga gtgacgagct ggccctcacg cagcccttcc
    11101 tgggctgcgc cctgcgggcc atcgcgcttg gcgcgacggt gggcctccgc tcctgcttcg
    11161 gcctcgcgca ggccctcggc cttgacgcgg cgctccagct ccagggccgt gtgggtcagc
    11221 tcggcgcagt agcgctggta gccgtccttg gggccgaagc cgaaggtggc cctgaaggcc
    11281 gcctcgaagt cgcgcttgcc cgccagccgc gtccagaggg tctggaagac cttgggatcc
    11341 ccggccttcg cttccagcca ctccaggtag gcgctgcccc ccaggtaggc catgctcccg
    11401 ccgaggaaac cgcccgtgcc gctgagggct tcgtaggtgg ggagcttgcc ttccagggcc
    11461 cactggcgca gcaccgacgc gcggagggcg ctgtgggggc ggccgctgcc cgtgagcctg
    11521 ccttcgatga gggtggcgta accctccgtc acccagcggg gcgatttttc cgtgaggggc
    11581 cccagcaccg ccgtccagcg ctgccacggg ttctgcttcc gggccgggcg cagcaggtgg
    11641 tgcatgtggc ccagctcgtg gacgacgagc agctccgccc agccccggtg gtggccgatg
    11701 gcggaatccg gttccggctc cgtcttccag agcaccacgt ggggccgcgg gaagagcggg
    11761 aaggccatgc cgttggcctc catgaccgga tccaggatga ggatgtcgat gggctgctca
    11821 tacgtgaatc ccacgagccc cagatactgg gcatggatgc cctccacgcg gcccgccacc
    11881 tcccggccga aggcctcgaa ggccgccggg cagtggacgc ggtagtgggc cgtggtgaag
    11941 gtgagccagg gggcgtccgg ggcctggatc ctcggtggcg cggcctggac cagggcggga
    12001 agcagggcca gggcgggcgc caggatccgg gagggcgggg ttcggagggc catgggtcca
    12061 gtgtgaccag ggccgtgacg aaggtcactt tttgagatgg catctcaaat ttggccttga
    12121 gattcgattt gatcttattg agactcattc ttgtgataac accggtggcc accctcctcc
    12181 tcgtccccgc cctcctgggt ggcgaggcag tcgtgccggg cctggaccgg aaggtcctgg
    12241 ccatggggac cgagctgagc ctgcacctgg agggacccgg agacctgcat ggggcctccg
    12301 aagcggccct ggccgaggcg atccggctcg agacggcctg ctccacctgg gatcccgcct
    12361 ccgcctggag ccgcctgaac gccgccggtg gccgacccgt ggcgctggac cgggaatgga
    12421 tcgcccttct ggaccgcgtg aaagcctggc aaagccgcac ggacggcgcc ttcgacccgg
    12481 tgctcatggc gctggtccgg gcctgggggc ttcgggaagg gggccgggtt cccgggtccg
    12541 cgaggttggc ccaggctcgc cgggcttcgg gttccggcct gctggagctg gatgtggccg
    12601 ccggcaccgc ccgcctggcc cacccggagg ccggggtgga ggaaggcgcc ttcctcaagg
    12661 gccacgccct ggatcgcatg aaggccgcgg cgggcacgcc cgcgggcctg ctcgatttcg
    12721 gcggccagct gctggcctgg ggccgggccg tgccggtctc ggtggccgat cccctggacc
    12781 gccagcgccc ccgcctgacc cttctgctgc ggaatgcctc cctggccagc agcggctcct
    12841 ccgagcgggg ccgccacctc ctcgaccccc gcagcggcca gctctgcccg gcctggggca
    12901 gcgtcgccgc cgtggccgct gaagggctcg aagcggatct cctgtccacc gccctctacg
    12961 tcatgggccc cgaggcgggc cccgcctggg ccgagcgcca cggcgccgcc gctgcctttc
    13021 tcctcaacga tggaagcctc cggatgtccc gggccttccg ttccctccac cccaccctga
    13081 ttccccagga gtctcgatga aatccctgct cacccccctc atgtgcgccc tgctggcggc
    13141 gcccgccttc gcccaggaaa agccggacgc cgaccagcgc atcgccgagc tggagcgccg
    13201 cctgaacgcc atgtcccagg agctggaagc ccagaagacc ggcacggcca tgcccgtggc
    13261 gggcgaggcg ggccacttcg gcatggcccc cgcggcctcc aaggtctatg gctccaaggg
    13321 cggcctgagc atcggcggct acggcgagat gctctacgag aacttcgatt cgaagctgca
    13381 gaacgggacc tacagctcca aggccaacac catc
//
LOCUS       DASUDT010000128         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1045374, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000128 DASUDT010000000
VERSION     DASUDT010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045374"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VFV26_02720"
     CDS             complement(<1..357)
                     /locus_tag="VFV26_02720"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX4845103.1"
                     /translation="MASPAFQVETVHLSQFREGSPEDRAEFIRVLGDSFRHTGFVKVA
                     GHQVRQADVDGAYDAARAFFALPEDVKRRYLVPGTGGARGFTPFGSEHAKDNPVGDLK
                     EFWHVGQELPAGHPLKP"
     gene            complement(506..1564)
                     /gene="recA"
                     /locus_tag="VFV26_02725"
     CDS             complement(506..1564)
                     /gene="recA"
                     /locus_tag="VFV26_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX4845104.1"
                     /translation="MAAAEQDDRLKALTRTLADIDRAFGKGSVMKLGDRMNSAEGIEV
                     ISTGSIALDSALGVGGVPKGRVVEVYGPEASGKTTLALHMVAQAQKKGGLAAYIDAEH
                     ALDPEYAQKLGVDVANLFISQPDSGEQALEICDQLVRSGALDIIVVDSVAALVPKAEI
                     DGEMGDSHVGLQARLMSQALRKMTGTISKTHTCVVFINQIRMKIGVMFGNPETTTGGN
                     ALKFYASVRLDVRSIQSIKGNTNDPLVAAKDEDSSVIGKKTKVKVVKNKVAPPLKVAT
                     FDIMYGEGISRTGELVELGTQLEIIQKSGSWYSYKDSRLGQGAENVKKLFMDNPELAD
                     EVETLIRERLGMKATVEA"
     gene            1666..>2551
                     /locus_tag="VFV26_02730"
     CDS             1666..>2551
                     /locus_tag="VFV26_02730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4845105.1"
                     /translation="MPTDPHPTPRLSATPPDLEAQLAAARAEADRYRALVDHLKEAVF
                     QIDRHGQWSFLNRAWTELTGFTVEECLGLPFLGSLHPADNPRYLNMLTYAVDTGQEAF
                     EGEFRIPTKGGEVKWVEANQRIAYDASGVVLGVSGTLNDITERKHTEIVLRMATSRLR
                     ALIENMQAGILVETEGRRIALLNETFCWMFQVPVPAHVLVESESLDLLEACLPLLESP
                     DTFLARADEVAAARQPVLGEELLLKDGRILSRDFVPILVGEEYLGHLWQYHDITERRR
                     AELKLEEAARELAVARDRA"
BASE COUNT          382 a          851 c          891 g          427 t
ORIGIN      
        1 gggcttgagg gggtggcccg cgggcagctc ctggcccaca tgccagaact ccttgaggtc
       61 gcccacgggg ttgtccttgg cgtgctcgct gccgaagggc gtgaaccccc gggcgccgcc
      121 ggttcccggc accaggtagc gccgcttgac gtcctcgggc agggcgaaga aggcccgggc
      181 ggcatcatag gcgccgtcca catcggcctg ccggacctga tgccccgcca ccttcacgaa
      241 gcccgtgtgc cggaagctgt cccccagcac ccggatgaac tcggcgcggt cctccgggga
      301 accctcgcgg aactgggaca ggtggacggt ttcgacctgg aaggcggggc tggccatggg
      361 gacctcggcg ggaccggcca tgatagctga cgtgacagga atcgccatcg gcctgccgcc
      421 cgggcggggc ccgaaaaaac ggcggcggcc ccgggggacc accgccgtct gccgacccct
      481 tccaagggcg cgcagtcgag gatctctagg cttccacggt ggccttcatg ccgaggcgct
      541 cgcggatgag ggtctcgacc tcgtccgcca gctcggggtt gtccatgaag agcttcttca
      601 cgttctcggc gccctggccc aggcggctgt ccttgtagct gtaccaggag ccgctcttct
      661 ggatgatctc cagctgggtg cccagctcca ccagctcgcc ggtgcggctg atgccctcgc
      721 catacatgat gtcgaaggtg gcgaccttga ggggcggggc gaccttgttc ttgacgacct
      781 tcaccttggt cttcttgccg atgacggagg aatcctcgtc cttggcggcc accaggggat
      841 cgttggtgtt gcccttgatg ctctggatgc tgcggacatc caggcgcacg gaagcataga
      901 acttgagggc gttgccgccg gtggtggtct cggggttgcc gaacatcacg ccgatcttca
      961 tgcggatctg gttgatgaag accacgcagg tgtgggtctt gctgatggtg ccggtcatct
     1021 tgcggagggc ctggctcatg aggcgggcct ggaggcccac gtggctgtcg cccatctcgc
     1081 cgtcgatctc ggccttgggc accagggcgg ccacggagtc caccacgatg atgtccaggg
     1141 cgccgctgcg caccagctgg tcgcagatct ccagggcctg ctcgccgctg tcgggctggc
     1201 tgatgaagag gttggccacg tccacgccca gcttctgggc gtattcggga tccagggcgt
     1261 gctcggcgtc gatgtaggcg gccaggccgc ccttcttctg ggcctgggcc accatgtgca
     1321 gggccagggt ggtcttgccg ctggcttccg gtccgtagac ctcgacgacg cggcccttgg
     1381 gcacgccgcc gacgcccagg gcggaatcga gggcgatgga gccggtgctg atgacctcga
     1441 tgccctcggc gctgttcatg cggtcgccca gcttcatgac cgagcccttg ccgaaggccc
     1501 ggtcgatgtc ggccagggtg cgggtcaggg ctttcaggcg atcgtcttgc tcggccgcgg
     1561 ccatggggtc ctccaagggg atgttttcca ggatgcggca aaaagcgaaa aaaacaagaa
     1621 atcttttttc acgcccgggc ccggtcccgc cgaagaaggg ggggcatgcc gaccgatccc
     1681 caccccaccc cccgcctctc tgccaccccc cccgacctgg aggcgcagct ggcggccgcc
     1741 cgggcggagg ccgaccgcta ccgggccttg gtggaccacc tgaaggaggc cgtcttccag
     1801 atcgaccggc acgggcagtg gtccttcctg aaccgggcct ggaccgagct cacgggattc
     1861 accgtggagg agtgcctggg gctgcccttc ctcggatccc tgcatcccgc cgacaacccc
     1921 cgctacctca acatgctcac ctacgcggtg gacacgggcc aggaggcctt cgagggcgag
     1981 ttccgcatcc ccacgaaggg cggcgaggtg aaatgggtgg aggcgaacca gcgcatcgcc
     2041 tacgatgcct ccggcgtggt cctgggggtc tccggcacgc tgaacgacat cacggagcgg
     2101 aagcacaccg agatcgtcct ccgcatggcc accagccgcc tgagggccct catcgagaac
     2161 atgcaggccg ggattctggt ggagacggag gggcggagga tcgccctgct caacgagacc
     2221 ttctgctgga tgttccaggt gcccgtgccg gcccatgtgc tggtggagag cgagagcctg
     2281 gacctgctgg aggcctgcct gcccctgctg gaatccccgg acaccttcct ggcccgggcg
     2341 gacgaggtgg ccgcggcgcg ccagcccgtc ctgggcgagg aactgctgct gaaggacggg
     2401 cgcatcctgt cccgggactt cgtgcccatc ctcgtgggcg aggagtacct ggggcacctc
     2461 tggcagtacc acgacatcac cgagcgccgg cgggcggagc tcaagctgga ggaggccgcg
     2521 cgggaactgg ccgtggcccg ggaccgggcc c
//
LOCUS       DASUDT010000129         3283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_669570, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000129 DASUDT010000000
VERSION     DASUDT010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669570"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VFV26_02735"
     CDS             <1..675
                     /locus_tag="VFV26_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4845106.1"
                     /translation="KNGLFVLRGHADLLELSTDDSKVRHHSRKILECVDRLTHLSQDV
                     LDFAKVREPKRETVDLRAFMDAILEPMVAQAAEMGVSLRAEGPSSLIKLDPGRFTRVM
                     ENLLTNALDATTGLHGEVTVAWIQVTGGVQIRVKDRGRGIPRRVIKRIFEPFFSYGKK
                     KGTGLGMATVKKIVEEHGGTLEFLSEEGEGTEVIILLPDHPITGAVRVSEESTGEHRS
                     LGAEHV"
     gene            672..1163
                     /gene="ispF"
                     /locus_tag="VFV26_02740"
     CDS             672..1163
                     /gene="ispF"
                     /locus_tag="VFV26_02740"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEX4845107.1"
                     /translation="MTSFRIGQGFDVHRFAEPEAGRPLILMGCDIPHDRGLAGHSDAD
                     VMLHALMDALLGAAGLGDIGLHFPDTDPAYRGADSAGLLERVMGDLAERGWRVVNADV
                     CLIGERPKVGPHRQRMRDRIAPLLGVHGEALNVKATTTEKLGFTGRGEGLAAQAVVLI
                     ERG"
     gene            complement(1160..2512)
                     /locus_tag="VFV26_02745"
     CDS             complement(1160..2512)
                     /locus_tag="VFV26_02745"
                     /inference="COORDINATES: protein motif:HMM:NF013871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX4845108.1"
                     /translation="MIWEPLLRLQAALGPESELAVVGGAVRDELLGRPHADWDLATRL
                     MPEAVMARARAAGLKAIPTGLQHGTVTVILEGRPLEITTFRSDGDYLDGRHPESVRLG
                     VSLEEDLSRRDFTINAMALPVGGGSLVDPFGGRMDLEAGQIRAVGDPRQRFAEDGLRT
                     LRACRFAAQLGFEVDAETLAAIPGRLEVARKVAVERAFVEITKLLCGAEPPRGLDLLA
                     ETGLLDLWLPELRAMMGCGQNRHHRHDVWRHTLEVVRLAPADPAMRWAALLHDAGKPA
                     ARSLGPDGEARFHGHEGHSLELAGAILERMKAGLALRREVLALVRHHGIHPEVAWSDA
                     ACRRFLCRLAEDGLELARWAAFRLADQRGKGMEIETRERDHAVILARLEALAAAAPPL
                     SVKALALDGAALMDLAGRKGGPWLGDLQRSLLEAVIEEPSLNTPEALAEVVRRRISGS
                     "
     gene            complement(2509..2991)
                     /locus_tag="VFV26_02750"
     CDS             complement(2509..2991)
                     /locus_tag="VFV26_02750"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4845109.1"
                     /translation="MLILRPAVPADAPLILQYIRELAAYEREPEAAVATEADILRHAF
                     SEHPLVKVTMAEWDGQAAGFALWFLNFSTWEGKPGIYLEDLFVRPAFRGKGIGKALLR
                     HLASLAVKEGWTRFVWQVLDWNTPAIEFYEAHGAKVMRPWLTCRVEGEALRQLAGAAD
                     "
     gene            3009..>3283
                     /locus_tag="VFV26_02755"
     CDS             3009..>3283
                     /locus_tag="VFV26_02755"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX4845110.1"
                     /translation="MDRDTALRLHEAMLLTRLTEERLVKLFRQGQTLGSVYRSLGQEA
                     TACATAMALGPGDVIAPMIRNLGSMFVRGATPLEIFLQYLGRATGPTG"
BASE COUNT          529 a         1185 c         1100 g          469 t
ORIGIN      
        1 aagaatggcc tcttcgtgct gcggggccac gccgatctgc tggagctgtc caccgatgac
       61 agcaaggtcc ggcaccattc ccgcaagatc ctggaatgcg tggaccgcct cacgcacctc
      121 agccaggatg tgctcgactt cgccaaggtc cgcgagccca agcgggagac cgtggacctg
      181 cgcgccttca tggacgccat cctcgaaccc atggtggccc aggccgccga gatgggcgta
      241 tccctccggg ccgagggccc atccagcctc atcaagctgg atcccgggcg cttcacgcgg
      301 gtgatggaga acctcctgac caatgccctg gatgccacga ccggcctgca cggcgaggtg
      361 accgtggcct ggatccaggt cacgggcggc gtccagatcc gcgtgaagga ccgcggccgg
      421 ggcattcccc gccgcgtgat caagcgcatc ttcgagccct tcttcagcta cgggaagaag
      481 aagggcaccg gactcggcat ggccaccgtc aagaagatcg tcgaagaaca cggagggact
      541 ttggagttcc tcagcgagga aggggaaggg accgaggtga tcatcctcct gcccgaccac
      601 ccgatcaccg gggccgtccg ggtatccgag gaatccaccg gcgagcaccg cagcctgggg
      661 gctgaacacg tatgacctcc ttccggatcg gccagggttt cgatgtgcac cgtttcgctg
      721 agcccgaggc gggccgaccc ctgatcctca tgggctgcga cattccccat gaccggggac
      781 tggcggggca cagcgacgcg gatgtgatgc tgcacgccct catggacgcc ctgctgggcg
      841 ccgcgggcct cggcgatatc ggcctgcatt ttccggatac ggatcccgcc taccggggcg
      901 cggactccgc cgggctgctc gaacgggtca tgggcgacct ggccgaacgc gggtggcggg
      961 tggtgaacgc cgatgtgtgc ctcatcggcg agcggcccaa ggtcggcccc caccgccagc
     1021 gcatgcggga ccgcatcgcc cccctgctgg gagtccacgg cgaggccctg aatgtgaagg
     1081 ccaccaccac cgagaagctg ggcttcaccg gccgcggcga agggctcgcc gcccaggccg
     1141 tggtgctcat cgaacgaggc taggaaccgg aaatccggcg ccggaccacc tcagccaggg
     1201 cctcgggggt gttgagggaa ggttcctcga tcaccgcttc cagcaggctg cgctgcagat
     1261 cccccagcca gggaccgccc ttccttcccg ccagatccat gagcgccgcg ccatccaggg
     1321 ccagggcctt cacggaaagg ggcggcgccg cggcggccag ggcctccagg cgggccagga
     1381 tcacggcatg gtcccgctcc cgggtctcga tttccatccc cttgccccgc tgatccgcca
     1441 gccggaaggc cgcccagcgg gccagttcca gcccatcctc tgccaggcgg caaagaaacc
     1501 ggcggcaggc cgcatcgctc caggccactt ccgggtggat gccgtggtgg cgcaccaggg
     1561 ccagcacctc gcgccgcagg gccagcccgg ctttcatccg ctcgaggatg gcccctgcca
     1621 gctccaggga atggccctcg tggccgtgga accgcgcctc gccgtccggc cccaggctgc
     1681 gggcggcggg ttttcccgca tcgtggagca gggccgccca ccgcatggcc gggtccgccg
     1741 gagccagccg gaccacctcc agcgtatggc gccagacatc gtggcgatgg tgacggttct
     1801 gaccgcaccc catcatggcg cgcagttccg gcagccatag atccaggagc ccggtttccg
     1861 cgagcagatc caatccccgc gggggttcgg caccgcaaag cagcttggtg atctccacga
     1921 aggcccgctc cacggccact ttgcgggcca cctcgagccg cccggggatg gcggcgaggg
     1981 tctctgcatc cacctcgaaa cccagctggg ccgcgaaacg gcaggccctc agcgtgcgca
     2041 ggccatcttc ggcgaaacgc tggcggggat cacccacggc gcggatctgg cctgcctcca
     2101 gatccatccg accaccgaag ggatccacca ggctgccccc gcccacgggt agggccatgg
     2161 cgttgatggt gaagtcgcga cgggagaggt cctcctccag ggatacgccc agccgcacgg
     2221 actcgggatg ccgtccgtcc aggtagtccc cgtcgctgcg gaaggtggtg atctccaggg
     2281 gccggccttc caggatcacc gtgaccgtgc cgtgctggag gcccgtggga atggccttca
     2341 ggcccgccgc ccgcgcccgg gccatgacgg cctcgggcat gagcctggtg gccaggtccc
     2401 agtccgcgtg gggacggccc agcagctcgt cgcggacggc gccgcccacg accgccaact
     2461 ccgattccgg ccccagggcc gcctgcagcc ggagcagggg ctcccagatc aatccgccgc
     2521 cccggcgagt tgccgaaggg cctcgccctc cacgcggcag gtgagccagg gccgcatgac
     2581 cttcgcgccg tgggcctcat agaactcgat ggccggggtg ttccagtcca gcacctgcca
     2641 cacaaagcgc gtccagccct ccttcaccgc gagggaggcc agatgccgga gcagggcctt
     2701 gccgatgccc ttcccccgga atgccggccg cacgaagaga tcctcgaggt agatgccggg
     2761 cttgccctcc caggtgctga agttcaggaa ccagagggcg aagcccgcgg cctggccatc
     2821 ccattcggcc atggtcactt tcaccagcgg atgctcggag aacgcgtggc ggaggatgtc
     2881 cgcctcggtg gcgacggcgg cctccggttc gcgctcgtag gctgccagtt cgcggatgta
     2941 ctggaggatc agcggggcat cggcggggac ggcgggacgg aggatcagca tgcgtctatg
     3001 ctaaccccat ggaccgcgac accgccctgc gccttcacga ggccatgctg ctcacccgcc
     3061 tcacggaaga acggctggtg aagctcttcc ggcagggcca gaccctcggc agcgtgtacc
     3121 gcagcctggg ccaggaggcc accgcctgcg ccaccgccat ggccctgggc cccggggatg
     3181 tcatcgcccc catgatccgc aacctgggtt ccatgttcgt gcgcggcgcc acgcccctgg
     3241 agatcttcct ccagtacctg ggccgggcca cgggccccac cgg
//
LOCUS       DASUDT010000130         2898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_647770, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000130 DASUDT010000000
VERSION     DASUDT010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647770"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1761)
                     /locus_tag="VFV26_02760"
     CDS             complement(13..1761)
                     /locus_tag="VFV26_02760"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEX4845111.1"
                     /translation="MRSLTTLLMSLLLPVAAWAQKADPSFDAVKSVGLAFQKGAVVLT
                     VPPDAHLKASFMEVVKKGGPGTLKAGPLPATTAKDEIGDGIWHGTVRIPVRGEGLSGT
                     VRLEVTYQPCTEGEGGVCFPPTTRVLEVRASEIPAGSPTLVSAEKPAVSPQEKTEDVA
                     APPVASSVPTGQAVPPAPAAEHSGLFWSLLLVFLAGMGASLTPCVYPMIPITMAIVGA
                     KGSGKARGFALSAVLVLGMAVTYTVLGVLAAKSGAAFGAFAQKPAFLIPVSLLFAAFA
                     LSLFGAFEIALPAGLAMRLQGDGSRKGFGGAFLMGLVLGPLSAPCVGPVIGAVLVGIA
                     QRGDVFMGGLQLFTFALGMGVLFMAVGTFSAALPKSGEWLTRFKQGMGLVVLGFAAWN
                     VRLVVPEWANFAMWTVVMLAGAAVLGAFEAASGLLGQLRKGSALLMLVLAALLGLRAT
                     ETYLKVDLLPRGGAAAAAKDEHSGWMEQDLEGALAKAKAERKLVLVDIYADWCAQCKE
                     LDEKTWPDPAVKAWIAKNAVAVRIDTDARRKDLAGPLRIQSYPTVILVDAEGRELRRL
                     LGFHKPEGMLKFLNGV"
     gene            1891..2556
                     /locus_tag="VFV26_02765"
     CDS             1891..2556
                     /locus_tag="VFV26_02765"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX4845112.1"
                     /translation="MAPAFPFPWSDALLARLRAHLAAEPFPRDAAHDLGHILRVAQLA
                     EGLAGEEGADAETCVAAALLHDLVYRPKNHPESPLTAQMASDLVPRWCQEIKGLGAKA
                     ATIAAAVASHSWSGGQEPASLEAAVVQDADRLEALGAIGIARVFATGASFGAGLWHPE
                     DPWAVGRDLDDKAWSLDHFERKLLKLAAGMKTAAGRRLAEGRHLTLRTYLDALRAELA
                     PQR"
     gene            2572..>2898
                     /locus_tag="VFV26_02770"
     CDS             2572..>2898
                     /locus_tag="VFV26_02770"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX4845113.1"
                     /translation="MAITLSLRRPFVADHFHDLPGFQEDRHGHNWEVEAAVALVSEAG
                     EPAFAKALDAWVAAIDYRLLNDLPALAGRNPTAELLAEQAFLHLQGAAFEPRWVRIRE
                     KANYWAL"
BASE COUNT          464 a         1092 c          956 g          386 t
ORIGIN      
        1 atcgtccccc catcatacgc cgttgaggaa cttcagcatc ccctccggct tgtggaagcc
       61 gaggaggcgc cgcagttccc tgccctcggc atccaccagg atcaccgtcg ggtagctctg
      121 gatcctcagc gggccggcca ggtccttgcg ccgggcatcg gtgtcgatgc gcacggccac
      181 ggcgttcttg gcgatccagg ccttcaccgc cgggtccggc caggtcttct cgtccagttc
      241 cttgcactgg gcgcaccagt ccgcgtagat gtccaccagc acgagcttgc gttcggcctt
      301 ggccttggcg agggcgcctt cgaggtcctg ctccatccag ccgctgtgct catccttcgc
      361 cgccgcagct gcgccgcccc tgggcagcag gtccaccttc aggtaggttt ccgtggcgcg
      421 caggcccagc agcgccgcga ggacgagcat gaggagggcg gagcccttgc ggagctgccc
      481 cagcaggccc gaggccgcct cgaaggcccc cagcaccgcc gcgcccgcca gcatcaccac
      541 ggtccacatg gcgaagttcg cccactcggg caccacgagc cgcacgttcc aggccgcgaa
      601 gcccagcacc accaggccca tgccctgctt gaagcgcgta agccactcgc cgctcttggg
      661 cagcgccgcc gagaaggtgc ccaccgccat gaacagcacg cccatgccca gggcgaaggt
      721 gaagagctgc agcccgccca tgaagacatc gccccgctgg gcaatgccca cgagcaccgc
      781 cccgatgacg ggccccacgc agggcgccga caggggcccc agcaccaggc ccatgaggaa
      841 ggcccctccg aagcccttgc gggatccgtc cccctgaagc ctcatggcca ggcccgcagg
      901 cagggcgatc tcgaaggccc cgaagagcga cagcgcgaag gccgcgaaga gcagcgatac
      961 agggatgagg aaggcgggct tctgggcgaa ggccccgaag gctgcaccac tcttggccgc
     1021 cagcacgccc agcaccgtgt aggtcacagc catgcccagc accagcaccg ccgacagcgc
     1081 gaagccccgg gccttgccgc tgcccttggc ccccacgatg gccatggtga tggggatcat
     1141 cgggtacaca cagggcgtga gcgacgcccc catgcccgcc aggaagacca ggagcaggga
     1201 ccagaacagg ccggagtgtt cagccgcggg ggcaggcgga accgcctgcc ccgtgggaac
     1261 cgatgaagcc accgggggcg ccgccacgtc ttcggttttc tcctgcggag aaaccgcagg
     1321 tttctccgca gaaaccagcg tgggcgagcc agccggaatc tcagacgccc tcacctccag
     1381 cacccgcgtc gtcggcggga agcagacgcc gccctcgccc tcggtgcagg gctggtaggt
     1441 gacctcgagc cggacggtgc cgctgagccc ctcgccccgc acggggatgc gcaccgtgcc
     1501 gtgccagatg ccatcgccga tctcgtcctt ggccgtggtg gcgggcaggg gaccggcctt
     1561 cagggtgccg gggccgccct tcttcaccac ctccatgaag gaggccttca ggtgggcgtc
     1621 cgggggcacc gtcagcacca cggccccctt ctggaaggcg aggcccacgc tcttcaccgc
     1681 gtcgaaggag ggatccgcct tctgggccca ggccgccacc ggcagcagca ggctcatcaa
     1741 aagggtcgtc aggctccgca tgggtcctcc aggaacgctc atcttaaggc atcggagggc
     1801 gcgccatcgc cggattcgcc aggcgccacc ggccactccg ctggcaggag ctgccgggaa
     1861 gagggccgga atcaggctag gctggatccc atggcgcccg cattcccctt cccctggtcc
     1921 gatgccctgc tggcgcgcct ccgcgcccac ctggccgccg agccctttcc ccgggacgcc
     1981 gcccacgacc tgggccacat cctgcgggtg gcgcagctgg cggagggcct ggccggggag
     2041 gagggcgccg acgcggagac ctgcgtcgcc gcggccctgc tccacgacct ggtctaccgt
     2101 cccaagaacc acccggaatc gcccctcacg gcccagatgg cctcggatct ggtgccccgg
     2161 tggtgccagg agatcaaggg cctgggggcg aaggccgcca ccatcgccgc cgccgtggcc
     2221 agccacagct ggagcggagg ccaggagccc gccagcctgg aggccgccgt ggtgcaggac
     2281 gcggaccgcc tggaggccct gggcgccatc ggcatcgccc gggtcttcgc cacgggggcc
     2341 agcttcggcg cgggcctgtg gcacccggag gatccctggg ccgtgggccg cgatctggat
     2401 gacaaggcct ggagcctcga ccacttcgaa cggaagctcc tgaagctcgc cgccggcatg
     2461 aagaccgccg ctggaaggcg cctcgccgaa ggccgccacc tcaccctgcg gacctacctc
     2521 gacgccctgc gcgccgagct tgccccccag cgctgaccgc tatactcgga catggccatc
     2581 accctgtcgc tccgccggcc cttcgtggcc gaccatttcc atgacctgcc gggattccag
     2641 gaagaccgcc acggccacaa ctgggaggtg gaggcggcgg tggcattggt ttccgaagcc
     2701 ggcgaaccgg ccttcgcgaa ggccctggac gcctgggtgg cggccatcga ctaccggctg
     2761 ctgaacgacc tgcccgccct cgccgggcgc aatcccactg cggagcttct ggccgagcag
     2821 gccttcctcc acctccaggg ggctgccttc gaaccccgct gggtgcgcat ccgcgaaaaa
     2881 gcgaactact gggccctg
//
LOCUS       DASUDT010000131         2322 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1332222, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000131 DASUDT010000000
VERSION     DASUDT010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332222"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..>2322
                     /locus_tag="VFV26_02775"
     CDS             55..>2322
                     /locus_tag="VFV26_02775"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEX4845114.1"
                     /translation="MHPIARYLHRLHQIHASGQGTAETSSYSALEELLETLGKGLKPV
                     VVPLSQMKNQGAGMPDFGLYTKEQLRRKGVELNAINPARGVVEVKGPSDNTWLTAKGA
                     QATKYWEKYRLVLVTNYRDFLILGEDADGKPLQLGTLSISRDEAEFWAAARHAERTAE
                     LQGEAVLDFLRRALLQAAPLREPEDLAALLAGYAREARERVEKHATLPALEGLRKAME
                     ESLGLSFEGKDGEHFFRSTLVQTLFYGVFSAWVAWCDKAAADDRFAWRNADETLAVPV
                     VQDIFEHLTGSSKLDALGLRDVMAWAEDALNRVDRAAFFRRFAAEHAIQYFYEPFLQA
                     FDPELRKDLGVWYTPREVVRYMVARVDRVLREELGRPEGLADPSVHVLDPCCGTGAFL
                     VEVARKIHENLEESGQGALAGSLLKQALQKRVFGFELLPAPFVVAHLQMGLMLSRLGA
                     GLGKDERLPVYLTNALTGWEHPAEPRKEAVLQQLADERVAADAVKHQKPILVILGNPP
                     YSGYAGISNMSEERSLSHAYREPVAGWEPMRRPEGQGLNDLYVRFFRMAERKIAEWSK
                     EGVVCFISNYAWLDGLSHPLMRQAFMQHFDRIWIDSLNGDKYRTGKVTPEGEPDPSIF
                     STPQNREGIQVGTAVALMVRKAKHHAAQGVAYRDLWGKDKLAQLEREADGPAPAYPGQ
                     VTPHPKLGLPFRPLAVSAAYLSWPTLEELFPVSFPGVKTSRDSFLVDIDRDRLEARLT
                     AYFDPALSHSAFKARH"
BASE COUNT          383 a          801 c          772 g          366 t
ORIGIN      
        1 ggggcttctg gttctggagt gatgcccaac cccatctgtc gctagactgg ccccatgcac
       61 cccatcgcca ggtacctgca tcggctccac cagatccatg cctcggggca gggcacggcg
      121 gaaaccagct cgtactcggc cctggaagag ctgctggaga ccctcggcaa gggcctgaag
      181 cccgtggtcg tgcccctgtc gcagatgaag aaccagggcg cgggcatgcc cgatttcggc
      241 ctgtacacca aagagcagtt gcgccggaag ggcgtggagc tgaacgccat caaccccgcc
      301 cggggcgtgg tggaggtcaa agggccttcc gacaacacct ggctcacggc caagggcgcc
      361 caggccacca agtactggga gaagtaccgg ctcgtgctgg tgacgaacta ccgcgacttc
      421 ctcatcctgg gtgaagatgc cgacgggaag ccgctccagc tgggcaccct ctccatctcc
      481 agggatgaag ccgagttctg ggccgccgcg cggcatgccg aacgcacggc ggagttgcag
      541 ggcgaagccg tgctggattt cctgcgccgg gccctgctcc aggccgcgcc cctgcgggag
      601 cccgaggatc tggccgcgct gctggcgggc tatgcgcggg aggcgcggga gcgggtggag
      661 aagcacgcga ccctgcccgc cctcgaaggc ctgcgcaagg ccatggaaga gagtctgggc
      721 ctcagtttcg aaggcaagga cggtgagcac ttcttccgct cgacgctggt gcagacgctg
      781 ttctatggcg tgttctccgc ctgggtggcc tggtgtgaca aggccgctgc cgacgaccgc
      841 ttcgcctggc gcaatgccga cgagaccctg gccgtgcccg tggtgcagga catcttcgag
      901 cacctgacgg gttcgtcgaa gctggatgcc ctgggcctgc gcgatgtcat ggcctgggcc
      961 gaggatgccc tgaaccgtgt ggaccgcgcc gccttcttcc gccgcttcgc cgccgagcac
     1021 gccatccagt atttctacga gcccttcctc caggccttcg accccgagct gcgcaaggat
     1081 ctgggcgtgt ggtacacccc ccgcgaagtg gtgcgctaca tggtggcccg cgtggaccgc
     1141 gtgctgcggg aagaattggg gcggccagag ggcttggccg atccttcggt gcatgtgctc
     1201 gatccctgct gcggcaccgg cgccttcctg gtggaggtgg cgcggaaaat ccacgagaac
     1261 ctggaagagt ctggccaggg cgccctggcc ggttccctgc tcaagcaggc cctccagaag
     1321 cgcgtgttcg gcttcgaact gctgcccgcg cctttcgtgg tggcgcatct ccagatgggc
     1381 ttgatgctgt cgcgcctggg cgcgggcctg ggcaaggacg aacgcctgcc cgtgtacctc
     1441 accaacgccc tcacgggctg ggagcacccc gccgagcccc gcaaggaggc tgtgctccag
     1501 cagctggcgg acgagcgcgt ggcggcggac gccgtgaagc accagaaacc catcctcgtg
     1561 atcctcggca acccgccgta ctcgggctac gcggggatct cgaacatgag cgaggagcgc
     1621 agcctcagcc acgcctaccg cgagcccgtg gcgggctggg agcccatgcg gcggcccgaa
     1681 ggccagggcc tgaacgacct ctacgtgcgg tttttccgca tggccgagcg caagatcgcg
     1741 gaatggtcga aggagggcgt ggtctgcttc atcagcaact acgcctggct ggacggcctc
     1801 agccacccgc tcatgcgcca ggccttcatg cagcacttcg accgcatctg gatcgacagc
     1861 ctcaatggcg acaaataccg caccggcaag gtcacgcccg agggtgagcc cgatccgtcc
     1921 atcttcagca cgcctcagaa ccgcgaaggc atccaggtgg gcaccgccgt ggccctgatg
     1981 gtgcgcaagg cgaagcacca tgcggcccaa ggcgtcgcct accgcgacct ctggggcaag
     2041 gacaaactcg cccagttgga acgggaagcc gatggccccg cgcccgccta tccggggcag
     2101 gtgacgcccc accccaagct gggcctgccc ttccggcccc tggccgtgag cgcggcctac
     2161 ctgtcctggc ccaccctgga agagctgttt cccgtgtcct ttcccggcgt gaagaccagc
     2221 cgcgacagct tcctcgtgga catcgaccgg gatcgcctgg aggcccggct gacggcgtac
     2281 ttcgatccgg ccctcagcca cagcgccttc aaggcccgcc ac
//
LOCUS       DASUDT010000132         5196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1973330, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000132 DASUDT010000000
VERSION     DASUDT010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973330"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VFV26_02780"
     CDS             <1..372
                     /locus_tag="VFV26_02780"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEX4845115.1"
                     /translation="PVSADARVREVLVEQQRRIGNRGRWVVDGRDIGTVVFPGACCKI
                     FLTASPEARARRRFLELEAKGQTPVFEEVLGDLQRRDQADSTRAVAPLRPAEDAVELD
                     SSGLSLDQVVDWIVARHQAHP"
     gene            369..923
                     /locus_tag="VFV26_02785"
     CDS             369..923
                     /locus_tag="VFV26_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845116.1"
                     /translation="MIPLPGPIQEAWETEWLPVRTPALAGTTAAFLLLAWAALASESG
                     WIPLLDGVNLVFHEAGHPIFGILGWEPLTILGGTLMQLAVPLLAAGSFWLRREATGTA
                     FAGIWCFENLLNIARYVGDARAQVLPLVGGGEHDWADLLGRWGLLAQDALLAQGLRAI
                     GWLGMLACLGWLARRWHRSIRTPT"
     gene            complement(967..2013)
                     /gene="cydB"
                     /locus_tag="VFV26_02790"
     CDS             complement(967..2013)
                     /gene="cydB"
                     /locus_tag="VFV26_02790"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEX4845117.1"
                     /translation="MEMLWFWLVSVMVAIYVVMDGFDFGAGILHLVVAKTNEERREVL
                     GAIGPLWDGNEVWLLAGGGSMFLAFPKVLASGFSGFYLAIWLVVWCLMLRGISIEFRS
                     HLQDGLWRHFWDGTFALSSVLLPVLFGAALGNVLRGVPLGASGYFEMPLWTDFRTGGQ
                     LGILDWYTVLIGVFALVTVAAHGALFLAWKTAGAVHERAKGLALGLWGAVLLLWIVAS
                     YATSVVNPGIFQRLPQAPLGWAACLIVLTGLGLVFTGIKRERFLLAFLGSGAFILGLL
                     AASAACVYPVMLRSTLGPQFDLTALNASVGRHGLQTGLVWWLIGFPIALGYLAILFRF
                     HRGKVKAAGDGEGY"
     gene            complement(2023..3357)
                     /locus_tag="VFV26_02795"
     CDS             complement(2023..3357)
                     /locus_tag="VFV26_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX4845118.1"
                     /translation="MGDPLFWHRLQFGFTATYHYLFPQLTMGLALVIVVLKAMGLRTG
                     EARYNDAARFWIKIFGINFAIGVVTGIPLEFQFGTNWAKFSHFSGGIIGQTLGMEGMF
                     AFFLESSFLGMLIWGEKRLSPKAHFGAALALWIGSWLSGYFNIATNAFMQHPVGYTVA
                     ADGTLQLASFWAFLFNPWALGQYAHNMIAAAVTGSFVVAAIGAFWTLKGIYPEQAKLN
                     LRVGTIMGLIFSVLVAFPTGDLQGKLVAKYQPITLAAMEGRFESGPRAALTLVGQPNV
                     AKRRIENPIQLPAVLSFIAYGSFSSDVKGLLEFPEDQWPQNIELLYYAFHIMAGLGTI
                     MIAIMGLSALLLWKGRLDGNRTMLWVLMLAFPFPYIATTAGWAVAEFGRQPWLIYGVL
                     RTVDGASPTVNAGHTAFTTLGFAGIFVVLSVLWLFLVGREISHGPVSHTPKA"
     gene            complement(3637..3996)
                     /locus_tag="VFV26_02800"
     CDS             complement(3637..3996)
                     /locus_tag="VFV26_02800"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX4845119.1"
                     /translation="MSKLLEYWIYLIPLAVVAYLWWTRRSASAADVAAMLDRQAQIVD
                     VRTSAEFKSNGHARAVNIPLDQLEARAGELDRARPVLVCCETGSRSGFGVSILKRAGF
                     TEVANLGSWRRIHTLLS"
     gene            complement(4036..4209)
                     /locus_tag="VFV26_02805"
     CDS             complement(4036..4209)
                     /locus_tag="VFV26_02805"
                     /inference="COORDINATES: protein motif:HMM:NF039355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6132 family protein"
                     /protein_id="HEX4845120.1"
                     /translation="MKATAIRLALGLVVGGILGYGWYRLVGCSTGACPLTATPLRGIS
                     YGAFMGLIWALAK"
     gene            complement(4206..4418)
                     /locus_tag="VFV26_02810"
     CDS             complement(4206..4418)
                     /locus_tag="VFV26_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX4845121.1"
                     /translation="MNVDRIVHTVAGTFILASLALARFHHPNWIWFTVFVGANLLQSG
                     LTNWCLMSTILRKLGVPEGAGVGCSR"
     gene            complement(4483..>5196)
                     /locus_tag="VFV26_02815"
     CDS             complement(4483..>5196)
                     /locus_tag="VFV26_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4845122.1"
                     /translation="YALAALNKKIDAMKGTAGATVPRLGLAHPENTESLSLKWDGEWH
                     ITLEVFRDLGLAFAAVLVLIFVLVVGWFESFQIPWVILVPIPLSLIGIIPAHGLMGAF
                     FTATSMIGFIAGAGIIVRNSIILVDFIELKLKEGMSLESAVEEAGVVRFRPMLLTASA
                     VLVGSAVMLADPIFQGLAISLMAGEVAATLLSRIAVPVLYYLVARRGHAANLQRQGAL
                     TAPASPSHNPIALSNEQAT"
BASE COUNT          922 a         1705 c         1807 g          762 t
ORIGIN      
        1 cccgtcagcg ccgacgcccg cgtgcgcgag gtgttggtgg agcagcagcg ccgcatcggc
       61 aaccgtggcc gctgggtggt ggatggccgc gacatcggca ccgtggtgtt ccccggcgcc
      121 tgctgcaaga tcttcctcac cgccagcccc gaggcccgcg cacggcgccg cttcctcgaa
      181 ctggaagcca agggccagac tccggtcttc gaagaggtgc tcggcgacct ccagcgccgc
      241 gaccaggccg acagcacccg cgccgtggcc cctctgcgcc ccgccgagga cgccgtggaa
      301 ctggattcca gcggcctgag cctcgaccag gtggtggact ggatcgtggc gaggcaccag
      361 gcccatccgt gatccccctt cccggcccca tccaggaggc ctgggaaacc gagtggctgc
      421 ccgtgcggac gccggccctg gccggaacca cggccgcctt ccttctcctg gcctgggcgg
      481 ccctcgcgtc cgaatccggc tggattccgc tgctggatgg cgtgaacctc gtcttccacg
      541 aggccgggca tccgatcttc ggaatcctcg gctgggagcc cctcaccatc ctcggcggca
      601 cgctcatgca gctggccgtc cccctgctcg ccgcggggtc cttctggctc cggcgggagg
      661 cgacgggcac ggccttcgcc ggaatctggt gcttcgagaa cctgctgaac atcgcccgct
      721 atgtcggaga tgccagggcc caggtcctcc ccctggtggg cggcggcgag cacgactggg
      781 ccgacctgct gggacgctgg ggactgctgg cccaggacgc cttgctggcc cagggtctcc
      841 gcgccatcgg atggctgggc atgctcgcct gcctgggctg gctggccagg cgatggcatc
      901 gcagcatccg gaccccgaca tgaaacggcc cgggtctccc gggccgcctc atcggaaggc
      961 taacggtcag tagccctcgc catcgcccgc agccttcacc ttcccccggt ggaaccggaa
     1021 caggatggcc aggtagccga gggcgatggg gaagccgatg agccaccaca ccagcccggt
     1081 ctgcaggccg tggcggccca cgctggcgtt gagggccgtc aggtcgaact gcggccccag
     1141 ggtggacctc agcatcacgg gatagacaca ggcggcgctg gcggcgagga ggcccaggat
     1201 gaaggcgccg gagcccagga aggccagcag gaagcgttcc cgcttgatgc ccgtgaagac
     1261 caggcccagg cccgtgagga cgatcaggca ggccgcccag cccaggggcg cctggggcag
     1321 gcgctggaag atgccggggt tcaccacgga ggtggcgtag ctcgccacga tccagagcag
     1381 cagcactgca ccccagaggc caagggccag gcccttggcg cgctcatgca ccgccccggc
     1441 ggtcttccag gccaggaaca gcgcgccgtg ggcggccacg gtcaccaggg cgaacacgcc
     1501 gatgagcacg gtataccagt caaggatccc aagttggccc ccggtgcgga aatcggtcca
     1561 gaggggcatc tcgaagtagc cgctcgcacc caggggcacg ccccgaagca cgttgcccag
     1621 ggccgccccg aacagcaccg ggagcagcac gctggagagg gcgaaggtgc cgtcccagaa
     1681 gtggcgccag aggccatcct gcaggtggga gcggaactcg atggagatgc cgcggagcat
     1741 caggcaccag accaccagcc agatggccag gtagaacccg gagaagcccg aggccaggac
     1801 cttcgggaag gcgaggaaca tcgaaccgcc ccccgccagc agccagacct cgttgccgtc
     1861 ccagagggga ccgatggcgc ccagcacctc gcgccgctct tcgttggtct tggcgaccac
     1921 caggtgcagg atgcccgcgc cgaaatcaaa gccgtccatc acgacgtaga tggcgaccat
     1981 cacggaaacc agccagaacc agagcatttc catggcagcc tcctaggcct tcggggtgtg
     2041 ggagacgggg ccgtgggaga tctcgcggcc gaccaggaag agccacagga cgctgagcac
     2101 cacgaagatc ccggcgaagc ccagggtggt gaaggccgtg tgcccggcgt tcaccgtggg
     2161 cgaggccccg tcgacggtgc ggagcacgcc gtagatgagc cagggctggc ggccgaactc
     2221 ggccacggcc cagcccgcgg tggtggcgat gtaggggaag gggaaggcca gcatcagcac
     2281 ccagagcatg gtccggttcc cgtccagccg ccccttccag agcagcaggg cggacaggcc
     2341 catgatggcg atcatgatgg tgccgagccc cgccatgatg tggaatgcgt agtagagcag
     2401 ctcgatgttc tgcggccact ggtcctcggg gaactccagc aggcccttca cgtcgctgga
     2461 gaagctgccg taggcgatga agctcagcac cgcgggcagc tggatcgggt tctcgatccg
     2521 ccgctttgcc acgttgggct gccccaccag ggtgagggcg gcgcgggggc cgctttcgaa
     2581 gcgcccctcc atggccgcca gggtgatggg ctggtacttg gccacgagct tgccctggag
     2641 gtcccccgtg gggaaggcca ccaggacgct gaagatcagg cccatgatgg tgcccacccg
     2701 aaggttcagc ttcgcctgct ccgggtagat gcccttgagg gtccagaagg ccccgatggc
     2761 cgccaccacg aaggagcctg tcaccgccgc ggcgatcatg ttgtgggcgt actggcccag
     2821 ggcccaggga ttgaagagga aggcccagaa gctggccagc tgcagggtgc cgtccgcggc
     2881 cacggtgtag cccacggggt gctgcatgaa ggcgttggtg gcgatgttga agtagcccga
     2941 cagccagctg ccgatccaga gggccagcgc cgcgccgaag tgggccttcg gggacagccg
     3001 cttctcgccc cagatcagca ttccgaggaa gctgctctcc aggaagaagg cgaacatgcc
     3061 ctccatgccc agggtctggc cgatgatgcc gccggagaag tgcgagaact tcgcccagtt
     3121 ggtgccgaac tggaattcga gggggatgcc cgtgacgacg ccgatcgcga agttgatgcc
     3181 gaagatcttg atccagaacc gcgccgcgtc gttgtaccgg gcctcgcccg tcctgaggcc
     3241 catggccttc agcaccacga tgacgagcgc caggcccatc gtgagctggg ggaacaggta
     3301 gtggtaggtc gccgtgaacc cgaactgaag cctgtgccag aaaagcggat cgcccatggt
     3361 ccctcccgga atcgaaagcc gtgcggtgtt tctggagtgc caatgcgcgg ccagtatccc
     3421 acggcgcgga cctcaggatg tcacccaaag tcttgacatc acacgagaag gacgcggtga
     3481 cgaagatcac attgtttttt ataggtttta attagcaatt aattatattc tgattaaatc
     3541 ctgaacacgg acctgcctcg tgggtccgaa gggttcaagg gtaggggtgg cgggcccggg
     3601 gtgggcccgc cgtttttcat ccctgggggg ttcgcctcag gacagcagcg tgtggatgcg
     3661 gcgccaggag cccaggttgg ccacttcggt gaatccggcc cgcttcagga tggacacgcc
     3721 gaagccgctg cggctgccgg tttcgcaaca caccagcacc ggccgggccc gatccagctc
     3781 cccggcccgg gcctccagct ggtccagggg gatgttgacg gcccgtgcgt ggccgttgct
     3841 cttgaactcc gcgctggtgc gcacgtccac gatctgggcc tggcggtcga gcatggcggc
     3901 cacgtccgcg gcggacgccg accggcgggt ccaccacagg taggccacca ccgcgagggg
     3961 aatcaggtag atccagtatt cgagcagctt ggacatgaag gctccggatg gcggggtggc
     4021 aagggatccg ggccgctact tcgccagggc ccagatcagg cccatgaagg ccccgtagct
     4081 gatgccgcgg agcggcgtgg ccgtcagggg acaggccccc gtgctgcagc ccaccagccg
     4141 gtaccagccg tagccgagga tgcccccgac cacgagaccc agggcgaggc ggatcgccgt
     4201 ggccttcacc gggagcagcc cacgcccgcg ccttcgggca cgcccagctt gcgcaggatg
     4261 gtggacatca ggcaccagtt ggtgaggccg ctctggagca ggttcgcgcc cacgaagacc
     4321 gtaaaccaga tccagttggg gtggtggaac ctcgccaggg cgaggctcgc caggatgaag
     4381 gtgcctgcga cggtgtggac gatgcgatcg acgttcatgg atcactcctt agggggcctt
     4441 gcgaaccaac cagcgctttc ctggttggtt cgttagggcc ccttatgtcg cctgctcgtt
     4501 tgagagggcg atcgggttat gggaaggcga cgcaggggcg gtcagggccc cctggcgttg
     4561 caggttggcg gcatggcccc ggcgggccac gaggtagtag aggacgggca ctgcgatgcg
     4621 ggacagcagg gtggcggcga cctcaccggc catgaggctg atggccagcc cctggaagat
     4681 gggatccgcc agcatgaccg cgctgcccac cagcacggcg gaagcggtca gaagcatggg
     4741 gcggaagcgc accacgccgg cctcctccac cgcggattcc agcgacatgc cctccttcag
     4801 cttcagctcg atgaagtcca cgaggatgat gctgttgcgg acgatgatgc cggccccggc
     4861 gatgaagccg atcatgctgg tggccgtgaa gaaggccccc atcaatccgt gggcgggaat
     4921 gatgccgatg agcgacagcg gaatcggcac caggatcacc caggggatct ggaagctttc
     4981 gaaccagccc accaccagca cgaagatcag caccagcacc gcggcgaagg ccaggccgag
     5041 atcccggaag acctcgaggg tgatgtgcca ttcgccgtcc cacttcaggg agagggactc
     5101 ggtgttctcg ggatgggcca gccccaggcg tggcaccgtg gcgcccgccg tccccttcat
     5161 ggcgtcgatc ttcttgttca gggcggccag ggcgta
//
LOCUS       DASUDT010000133         3756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2017405, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000133 DASUDT010000000
VERSION     DASUDT010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2017405"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VFV26_02820"
     CDS             <1..496
                     /locus_tag="VFV26_02820"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4845123.1"
                     /translation="EMATLDPLTQISNRRGFLLLAQHSLSLCARQQVPASLVFLDLDR
                     FKSINDRFGHDEGDRVLVCFAELMKKVFRESDLLARLGGDEFVILLANATRSVAEELI
                     GRFAGSLAGFNEQAQRGYDIAFSSGITECLPGQHQTVEELLANSDALMYASKRGKAGS
                     RPRG"
     gene            652..1833
                     /locus_tag="VFV26_02825"
     CDS             652..1833
                     /locus_tag="VFV26_02825"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX4845124.1"
                     /translation="MMDDQARLKALRAYDLLDTPPEDVFDAFTQMASRLFSAPIALIS
                     LIDEERQWFKAKTGLDVMQTPRDVAFCDHAIRQKGPLVVSDATTDPRFAENPLVREEP
                     KIRFYCGVPLRSSDGHGLGTLCIIDRVPRQMDRADLEVLSRLARLVEQEFETRRRLRL
                     LEASLAAEAQKQQAKELLASMLVHDLRSPLTGIGLLGGVLGSKHPESHEMCDELNHLV
                     EKMDRMLSDVLDVCLGQVGRLQLRCEPLLAQDLLREALPSWRRFSQLKSQQIVLELPD
                     QPLAFTGDRELLTRLLTNLVGNAVQYGPMGQAIVISARPLETGGVRFEVVDQCLPVPI
                     EAIASIFRPFERLDRANSRGHGLGLAFCHLAAEAHGGRVGVRPADHGNCFFLELPPEI
                     R"
     gene            complement(1891..2154)
                     /locus_tag="VFV26_02830"
     CDS             complement(1891..2154)
                     /locus_tag="VFV26_02830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845125.1"
                     /translation="MTDTAIQTTLSTEEWKLVMALREIPDSPLRMKVSGLMGELVRFI
                     QQPRCLGMQSDGFPCGTPHTSCEECQHMLKVLDDLAARMPPQE"
     gene            complement(2280..3707)
                     /locus_tag="VFV26_02835"
     CDS             complement(2280..3707)
                     /locus_tag="VFV26_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEX4845126.1"
                     /translation="MSTSVFYDSFERHDHGRGLKAHATHYCPGCGHGLAHKYLAEAID
                     ELGIQDRTVAISPVGCSVFLYYYFDVGNTQAAHGRAPVVALGHKFANPESVVISYQGD
                     GDLASIGLAETVATAQLGAPITVIFINNAIYGMTGGQMAPTTLMGQTSSTSPSGRNEY
                     NGQPMKMAELIAGLDGPIYVERVALFDAKQRIKAKKAIQKALKLQMEGRGYSFIEVLA
                     ECPTHLKMDPEATAKWVKECMEPVYPLGVKKDATVEPWFKRNPPCFKGEKLLSLAGAT
                     YEHPVRACDGFPVHLDPMDISLKLAGSGGDGAQTAAMLIARASINEGFDATHIPSYGP
                     ESRGGTSYADVHVAKDEVLNPGSPDPQVLIAFNTPSLVKFGPTVRKGGYVIYDSSVVT
                     EPPVLDPSIRMFPVPFTGIATDLGKAVVKNIVALGALQAATQIFPKETLLTAIRVALK
                     DKCALIPLNEEAFAWGIKSVESLHN"
BASE COUNT          610 a         1117 c         1302 g          727 t
ORIGIN      
        1 ggaaatggcg accctggacc cgctcaccca gatctccaac cggaggggat tcctgctgct
       61 ggctcaacac agcctcagcc tctgtgcccg ccagcaggtg ccggcttctc ttgtcttcct
      121 ggacctggac cgattcaaat ccatcaatga ccggttcggg cacgatgaag gcgaccgggt
      181 cctggtctgc tttgccgagc tgatgaagaa ggtcttccgg gaatcggatc tcctagctcg
      241 gcttgggggc gatgaattcg tcatcctgct ggccaacgcc acccgatcgg tggcggagga
      301 gctgatcggc cgattcgcag ggtcattggc tggattcaat gagcaggccc agaggggcta
      361 cgacatagcc ttctccagcg gcatcacgga atgcctgccg gggcagcatc agaccgtgga
      421 ggaactgctc gccaactcgg atgccctgat gtacgcgagc aagcggggca aagcggggtc
      481 tcgcccccgg ggttgaaacg gcctgagggg tcgccggtgg ccatttcggg ctgctccagt
      541 tgtgggaaag cgcctaaggc cagggtattt gcacttcttg ttccaattca tactaggaca
      601 cagttacaat ctcttgattc ccaatcataa ttagtctgga gctcaagtcc aatgatggat
      661 gatcaggctc gactcaaggc attgcgcgcc tatgacctgt tggatacgcc cccggaggac
      721 gtgtttgatg ccttcaccca gatggcctcg aggctctttt ctgcgccgat cgccctgatc
      781 tcccttatcg atgaggaacg gcagtggttc aaggccaaga cagggctgga cgtcatgcag
      841 acgccccgcg acgtggcctt ttgtgatcat gccattcgcc aaaagggccc gctggtcgtc
      901 agcgatgcca cgacggatcc ccgcttcgcc gaaaaccccc tggtcaggga ggaacccaag
      961 atccggttct attgcggtgt gcccctgcgc agctctgacg ggcatgggct gggcacgctc
     1021 tgcatcatcg accgggtccc aaggcagatg gaccgggctg acctcgaagt gctctcccgg
     1081 ctagcaaggc tggttgagca ggagttcgag acccgccgcc gcctccggct tctcgaagca
     1141 tcgctcgcgg ccgaggccca gaagcagcag gccaaggaat tgctggccag catgctggtg
     1201 catgatctgc gcagcccctt gaccggcatt ggcctcctcg ggggagtgct gggaagcaag
     1261 catcccgagt ctcacgagat gtgcgacgag ctgaaccacc tggtcgagaa gatggatcgg
     1321 atgctcagcg atgtgctcga tgtctgcctc gggcaagtgg gacggctcca gcttcgctgc
     1381 gaaccgcttc tggcccagga cctgctccgg gaggcccttc catcctggcg gcggttcagc
     1441 cagctgaagt ctcagcagat cgttctggag cttccggatc aacctttggc tttcacgggg
     1501 gaccgggaac tcctcacccg tctgttgacc aacctggtgg gcaatgcggt tcagtacggc
     1561 cccatgggcc aggccattgt catctctgcc cggccgctgg agaccggcgg tgtccgtttc
     1621 gaggtcgtgg atcaatgcct gccggtcccc atcgaagcga ttgcctcgat cttccggccc
     1681 ttcgagcggc tcgaccgggc caattcgaga gggcatgggc tcgggctggc attctgccat
     1741 ctcgcagctg aagcgcacgg agggcgggtt ggtgtccgcc ctgccgacca cgggaactgc
     1801 ttcttcctgg agcttccacc cgagattcga tgacctcgcg gactgagcgg gaattgccct
     1861 gggcgtgcca gatcagggct tgggacgcgg tcactcctga gggggcatcc gcgcggccag
     1921 gtcatcgagg accttgagca tgtgctggca ctcctcgcag ctggtgtggg gggtgccgca
     1981 ggggaagccg tcgctctgca tgccgaggca gcggggctgc tggatgaagc gcaccagctc
     2041 gcccatgagg ccggagacct tcatgcggag cgggctgtcc gggatctccc ggagggccat
     2101 gacgagcttc cattcctcgg tgctgagggt ggtctggatg gcggtatccg tcatgggggc
     2161 tccggaggaa aagagttcac cacggagaca cggagggcac ggagaaaaga acacggaggg
     2221 ccatctgttg gttgttgttc tccgtgtttc ctctgtgtcc tccgtgtctc cgtggtggat
     2281 cagttgtgca gggattccac ggacttgatg ccccacgcga aggcttcttc gttgaggggg
     2341 atcagggcgc acttgtcctt cagggccacg cggatggccg tgagcagggt ctccttgggg
     2401 aagatctgcg tggcggcctg gagggcgccc agggccacga tgttcttcac cacggccttg
     2461 cccaggtcgg tggcgatgcc cgtgaagggc acggggaaca tcctgatgct gggatccagc
     2521 acggggggtt ccgtgaccac ggagctgtcg tagatcacgt agccgccctt gcggaccgtg
     2581 gggccgaact tgacgaggct cggcgtgttg aaggcgatga gcacctgggg atcgggcgat
     2641 ccggggttca gcacctcgtc cttggccacg tggacgtccg cgtaggacgt gccgccgcgg
     2701 ctctcggggc cgtagctggg gatgtgggtg gcgtcgaagc cctcgttgat ggaggcgcgg
     2761 gcgatgagca tggccgccgt ctgggcgccg tcgccgccgg aaccggccag cttcagcgag
     2821 atgtccatcg gatcgaggtg gacggggaag ccgtcgcagg cccgcacggg gtgctcatag
     2881 gtggcccccg cgaggctgag gagcttctcg cccttgaagc agggcgggtt gcgcttgaac
     2941 cagggctcga cggtggcgtc cttcttcacg cccagggggt acacgggttc catgcactcc
     3001 ttgacccact tggcggtggc ctcgggatcc atcttcaggt gggtggggca ctcggccagc
     3061 acctcgatga aggagtagcc gcggccttcc atctggagct tgagggcctt ctggatggcc
     3121 ttcttcgcct tgatgcgctg cttggcgtcg aagagggcca cgcgctccac gtagatgggg
     3181 ccgtcgaggc ccgcgatgag ctcggccatc ttcatgggct ggccgttgta ctcgttgcgg
     3241 cccgaggggc tggtggagct ggtctggccc atgagcgtgg tgggggccat ctggccgccg
     3301 gtcatgccgt agatggcgtt gttgatgaag atgacggtga tgggggcgcc cagctgggcc
     3361 gtggccacgg tctcggccag gccgatggag gccaggtcgc cgtcgccctg gtagctgatg
     3421 accacgctct cggggttggc gaacttgtgg ccgagggcca ccacgggcgc gcggccgtgg
     3481 gcggcctggg tgttgcccac atcgaagtag tagtagagga acacggagca gcccacgggg
     3541 ctgatggcca ccgtgcggtc ctggatgccc agctcgtcga tggcctccgc caggtacttg
     3601 tgggcgaggc cgtggccgca gccggggcag tagtgggtgg cgtgggcctt gagcccgcgc
     3661 ccgtggtcgt gacgctcgaa gctgtcgtag aagacgctcg tggacatcgc ttactccagg
     3721 acccgctcga cgatttcgct cacggaggga aggacg
//
LOCUS       DASUDT010000134         2739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1266095, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000134 DASUDT010000000
VERSION     DASUDT010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266095"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VFV26_02840"
     CDS             complement(<1..560)
                     /locus_tag="VFV26_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845127.1"
                     /translation="MTWIDSALVLRMGWTLVHFLWQGVALAGVLALILWLTKGRSPRF
                     RYGLACAVLLAMAVAPVATWYRLGQPQAASRVFLTSSDQAAPAFPSTTPPESASPVDG
                     KGTSDRTWDGILPFSVGLWLLGVSIMSLRLASGWAWLQWLRRRPDTVPASDDIQLRLL
                     RLCQRMKLASNIRILLCEKVPGPTVMG"
     gene            complement(557..946)
                     /locus_tag="VFV26_02845"
     CDS             complement(557..946)
                     /locus_tag="VFV26_02845"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX4845128.1"
                     /translation="MSELPRPSDFELAILRVLWRLGEGTVRQVHGALQAERQQGYTTV
                     LKTMQIMAEKGLLRRDESAKSHVYRPTEAPQDTRRSMVRDLVDKAFEGSALQLLAHAL
                     HAKRPSASELDEIQALIDQARSERRRK"
     gene            complement(1123..1596)
                     /locus_tag="VFV26_02850"
     CDS             complement(1123..1596)
                     /locus_tag="VFV26_02850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX4845129.1"
                     /translation="MSGSLNKVLLIGNLGRDPELKATPSGQSVARFSIATTETWKGQD
                     GTKQSKTEWHNIVVWGKQAEIAEKYLRKGKQIMVEGRIQYREYTGQDGVKKTACDIRC
                     DNFVMLGRMEDGGSRDSGGYGGKSSGGGSQDFEDHGAPSPAGSGGGSFPDDDIPF"
     gene            1696..2439
                     /locus_tag="VFV26_02855"
     CDS             1696..2439
                     /locus_tag="VFV26_02855"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX4845130.1"
                     /translation="MSSAKSNLLVSCKNKSGAEKHYLPAIKAAGWTGPLLLVAPGDPL
                     PDLAEVSGLLLTGGDDIHPRHWDGAEPVHPKAEVDAGRDAFEIPLIRAAWDRNLPILG
                     ICRGEQILNVALGGSMIQDVPEHFGCEPSRHQHGTPDHPDMRHRVQLAPGSRLRALLG
                     EDVFLVNSRHHQAVRRVAPALVAAGWHLDTAHPETGPLIEAIEAADPARWVFGVQWHP
                     ENLVGLKGPAGDAARDLFAAFVKALGSSS"
BASE COUNT          473 a          923 c          849 g          494 t
ORIGIN      
        1 cccatcaccg tgggtcccgg cactttttcg cagaggagga tccggatgtt gctggccagc
       61 ttcatgcgct ggcacaagcg caacagccgc agctggatgt cgtcagaagc cggcacggtg
      121 tcggggcggc ggcgcagcca ctggagccag gcccagccac tggccagacg cagactcatg
      181 atgctgacgc cgagcagcca caggcctacg ctgaacggta ggattccatc ccaggtgcgg
      241 tccgaggtgc ctttgccatc cacgggggaa gctgattctg gcggcgtggt gctagggaaa
      301 gccggagccg cttggtccga tgatgtgagg aacactcggc tcgcggcctg aggctgcccc
      361 aatcggtacc aggtggccac cggtgcgact gccatcgcca gcaagaccgc gcaggccagt
      421 ccgtaacgaa aacgcggcga ccgccccttg gtcaaccaca ggatcaaggc caggacaccc
      481 gccaaggcca cgccctgcca gaggaaatgt accagcgtcc accccatccg cagcaccagg
      541 gccgaatcga tccaggtcat ttgcgcctcc gctccgaccg cgcctgatcg atgagggcct
      601 ggatctcgtc caattccgat gcactgggcc gcttggcatg cagggcgtgg gccagcagct
      661 ggagcgccga gccctcgaat gccttgtcca ccaaatcacg caccatgctg cgccgagtgt
      721 cctgcggggc ctctgtaggc cggtagacat gactcttggc gctttcatcc cgccgcagca
      781 ggcccttctc cgccatgatc tgcatggtct tcagcaccgt cgtatagccc tgctgtcgtt
      841 cagcctgcag ggcaccgtgg acctggcgca ccgtgccctc ccccaggcgc cagagcacac
      901 gcaggatggc cagttcgaaa tccgaagggc ggggtaactc agacatggag actccagggt
      961 gttcacaatc tacggtttca tccgtaggtt gtcaacggat gtttccgtac atcattttcc
     1021 gaggcggctc cgccgccgga aggtcctttc ctatctgcag aacggcgccc gaatgggcgc
     1081 cgttctgcag cctgccgata ccttcggcgg aaccaccacc cctcagaacg ggatgtcgtc
     1141 atccgggaag ctgccaccgc cactgccggc cgggctgggg gcgccgtggt cctcgaagtc
     1201 ctgggagccg ccgccggagg acttgccgcc gtagccgccg gaatcgcggc tgccgccgtc
     1261 ctccatgcgg cccagcatga cgaagttgtc gcagcggatg tcgcaggcgg tcttcttcac
     1321 gccgtcctgg ccggtgtact cgcggtactg gatgcggccc tcgaccatga tctgcttgcc
     1381 cttgcgcagg tacttctccg cgatctcggc ctgcttgccc cacaccacga tgttgtgcca
     1441 ctcggtcttg ctctgcttgg tgccgtcctg gcccttccag gtttccgtgg tggcgatgct
     1501 gaagcgggcg acgctctggc ccgaaggcgt ggccttcagc tcgggatcgc ggcccaggtt
     1561 gccgatgagc agaaccttgt tcaatgaacc ggacatgatg tcctccttgt gtatcggcgg
     1621 agctctccgc ctcaccgtcg actcagacca tctgaggggg tggtagggtg atgaggtttg
     1681 cgccgaggga aagccatgtc aagcgccaag tcgaacctcc tggtgagctg caaaaacaag
     1741 tccggcgccg agaagcatta ccttccggcc atcaaggcgg cgggctggac gggccccctg
     1801 ctcctggtgg cccccgggga tcccctgccg gatctggcag aggtctcggg ccttctgctc
     1861 acgggggggg acgacatcca tccccgccac tgggacgggg ccgagcccgt gcacccgaag
     1921 gccgaggtgg atgccggccg cgacgccttc gagatcccgc tcatccgcgc ggcctgggac
     1981 cggaacctgc ccatcctcgg catctgccgc ggcgagcaga tcctcaacgt ggccctgggc
     2041 ggcagcatga tccaggatgt gcccgaacac ttcggctgcg agccctcccg gcaccagcac
     2101 ggcaccccgg accatccgga catgcgccac cgcgtgcagc tggcgccggg ttcccgcctg
     2161 cgggccctcc tgggcgagga cgtgttcctc gtgaacagcc gccaccatca ggccgtgagg
     2221 cgcgtggccc cggctctggt ggccgcaggc tggcatctgg acaccgccca cccggagacc
     2281 ggccccctca tcgaggccat cgaagccgcc gatcccgccc gctgggtctt cggcgtccag
     2341 tggcaccccg agaatctcgt gggcctcaag ggccccgccg gagacgcggc acgggacctg
     2401 ttcgcagcct tcgtgaaagc cctcggttcc tcatcttgat ccgctggtga ctccttcaaa
     2461 acggtcaaca gggcgttcat tttgatgatc atcgatcagc gccaagtcgt cgtcatgacg
     2521 tctaaatatt gaaataaatt gattaaataa atggattaaa gattgcagta atgaccctgt
     2581 cctttaagga gacagatcat gaacctgcaa gatttgaagc ctcactccgc ggcactggtg
     2641 gtcgccctgg tcaccctggt gggagcgcag ttcggttgcc agaagatggc gttctggcgt
     2701 tccaagcccc aggagatgca tgccgcttcc gatgtcccc
//
LOCUS       DASUDT010000135         2174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1774611, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000135 DASUDT010000000
VERSION     DASUDT010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774611"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VFV26_02860"
     CDS             complement(<1..416)
                     /locus_tag="VFV26_02860"
                     /inference="COORDINATES: protein motif:HMM:NF016593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845131.1"
                     /translation="MHLIRHPFPADLLTPLAAYLALRPAGASLLLESCDQGERVGRHS
                     FVLLEGPAECRLDPPARGWPEALRALSGPRSSGSVSDPAAELRAPKEPLPVGVGCAGY
                     LGFEAVGALEPTLPQPAENSLGLPGLWVRRFDGALV"
     gene            651..1577
                     /locus_tag="VFV26_02865"
     CDS             651..1577
                     /locus_tag="VFV26_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845132.1"
                     /translation="MTEAPPTTIHTDEALAPRGPWRFLRSALPGGFSRWGWGLLAGWS
                     LVLLGPVMGWAGHLRRAAGWSALPSHWGERISARDIWELWENGGLQHRLANSPTVHLF
                     GLGLVIVLWCGWRMQAEAAGQKARLGSWLLGALDTVLIGFLPVGFAAWLVDGALAWAG
                     GLGIDGLGWLAFFGRPLVWMATVAALNLQWWFCRIGRAAGLARGYRAHLTESFLRLWS
                     HPIQWGLIAFGGAALRSLPSFLVLLLAWRMGGGTTVRVVLFLALQLAVTLFNGWLMGW
                     LLRTAALFWIHDAAVRDARAALKEAPREAAAL"
     gene            1558..>2174
                     /locus_tag="VFV26_02870"
     CDS             1558..>2174
                     /locus_tag="VFV26_02870"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX4845133.1"
                     /translation="MKLPPSSALLAALLSLSLAAQPPSAKAEVIPVTEAIPNDPEIQK
                     VIAPLAAEIQASFGLPLAQAPQGLFRGRRGEENLLGYWVSDVMRQAAQPLVGGPVRFA
                     ITNAGGLRANLRPGQIKVGDIFELMPFENELVVIELTGAEVIQAVTEGLLRRGGEPCS
                     GVKVKVEGTPQQATLSITWEDGSAIDPAAVVKVATTDYLYGGGDS"
BASE COUNT          290 a          779 c          777 g          328 t
ORIGIN      
        1 aagaccaggg ccccatcgaa tcggcgcacc cacaggccgg gcaggcccag gctgttctcc
       61 gccggctgcg gcagggtggg ctccagggcg cccacggctt cgaagcccag gtagcccgca
      121 cagcccacgc ccaccgggag cggctctttc ggggcccgga gttccgccgc gggatcgctg
      181 acagaaccgg aagaccgcgg cccggagagc gccctcagcg cttccggcca tccccgggcc
      241 ggcggatcca gtcggcattc ggcggggcct tccagcagca cgaagctgtg acggcccacc
      301 cgctcgccct ggtcgcagga ttccaggagc aggctggccc ccgcggggcg cagggccagg
      361 taggcggcga ggggggtcag caaatccgcg ggaaacgggt gccggatcag gtgcatggag
      421 acgtccatcg acaaaaaagc ccgaccatgg ggtcgggctt ggaagggtcc ggggtggcgg
      481 gggccgtcag gcctcgccga gggagccgtc caagcccgta cgccaccaat aggccccatt
      541 gaggaggccc tggctggggg acgggaagga cagcggcatg gaagcgatga aaccccatcc
      601 gcgcggcccc tgtcaagtgt ggtttgatga aggattgctt gcggacagcc atgactgagg
      661 cccctcccac caccatccac accgacgagg ccctggcccc ccggggacct tggcggttcc
      721 tccgctccgc cctgcccggc gggttcagcc gctggggctg gggcctcctg gccggctggt
      781 ccctggtgct gctgggcccg gtcatgggct gggccggcca cctgcgccgg gccgcaggct
      841 ggagcgcgct gcccagccac tggggcgagc gcatcagcgc ccgggacatc tgggagctgt
      901 gggagaacgg cggcctccag caccgcctgg cgaactcgcc cacggtgcat ctcttcggac
      961 tgggcctcgt gatcgtgctc tggtgcggct ggcgcatgca ggcggaagcg gccgggcaga
     1021 aggcccgcct gggctcctgg ctgctgggcg ccctggatac ggtgctgatc ggattcctgc
     1081 ccgtgggctt cgcggcctgg ctggtggatg gggccctggc ctgggcgggc ggcctcggca
     1141 tcgacggcct gggctggctg gccttcttcg ggcgtcccct ggtgtggatg gccaccgtgg
     1201 ccgccctgaa cctccagtgg tggttctgcc gcatcggccg cgccgcgggg ctggcccgcg
     1261 gctaccgggc ccacctcacg gaaagcttcc tgcgcctgtg gtcccatccc atccagtggg
     1321 gcctcatcgc cttcggcggg gcggccctgc ggtcgcttcc atccttcctg gtcctgctcc
     1381 tggcctggcg catgggcgga ggcaccaccg tccgggtcgt gctgttcctg gccctgcagc
     1441 tggccgtcac cctgttcaac ggctggctga tgggctggct tctgcgtacc gccgccctgt
     1501 tctggatcca tgatgccgcc gtgcgggatg cccgcgccgc cctgaaggaa gccccccgtg
     1561 aagctgccgc cctctagcgc cctcctcgcc gcccttctgt ccctctccct ggcggcgcag
     1621 cccccgagcg cgaaagccga ggtcatcccc gtcaccgagg ccattccgaa cgatccggag
     1681 atccagaagg tcatcgcgcc cctggctgcg gagatccagg ccagcttcgg cctgccgctg
     1741 gcgcaggcgc cccagggcct gttccggggc cggcgcggcg aagagaacct gctgggctac
     1801 tgggtgtcgg atgtcatgcg ccaggccgcc cagcccctgg tgggcggccc ggtgcgcttc
     1861 gccatcacca atgcgggcgg cctgcgcgcc aacctgcgcc ccgggcagat caaggtcggt
     1921 gacatcttcg agctgatgcc cttcgagaac gagctcgtcg tcatcgaact caccggtgcc
     1981 gaagtgatcc aggcggtgac cgagggcctg ctccgccgcg gcggggagcc ctgctccggg
     2041 gtgaaggtga aggtcgaggg caccccccag caggccacgc tgtccatcac ctgggaggac
     2101 ggcagcgcca tcgatcccgc ggcggtggtg aaggtggcca ccaccgacta cctctacggc
     2161 ggcggcgatt ccat
//
LOCUS       DASUDT010000136        10149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_802289, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000136 DASUDT010000000
VERSION     DASUDT010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 10149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10149
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802289"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VFV26_02875"
     CDS             <1..305
                     /locus_tag="VFV26_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4845134.1"
                     /translation="GNPEVSGVASQVEKDLEAAGFEVLHDDREGMSPGAKFKDADLLG
                     FPLRLIVGAKGLKDGIVELRDRRTKEVVKLKPEAAVAEVSAARDRIMQELETAGGR"
     gene            319..792
                     /locus_tag="VFV26_02880"
     CDS             319..792
                     /locus_tag="VFV26_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845135.1"
                     /translation="MAEGRVHLTTFIEGVLVHGQQTPFVLLVPSPHSPHRGLLMPAQI
                     PWSPGFLPTALLNAQIEAGWGMPFRFVDNSTLPVVFDERTSRLPTPWLLRLEGLEGQQ
                     RLYLSHLLHTKAPEDLLPPPPPGGQWYSDKGLQNADLLPGVRRLCQAALQTVMEG"
     gene            complement(868..1287)
                     /gene="ndk"
                     /locus_tag="VFV26_02885"
     CDS             complement(868..1287)
                     /gene="ndk"
                     /locus_tag="VFV26_02885"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX4845136.1"
                     /translation="MAFERTFAIVKPDAVQDGHMGEILTAIEQSGLKVVGLKLTRLTP
                     AICQGFYHEHVGKGFYAELEAFMTEGPVAIMVLEGENAILRWRDLMGATNPANAAEGT
                     LRKRFGASIGRNATHGSDKPESARFEVSYFFNAFEQF"
     gene            1427..4045
                     /gene="secA"
                     /locus_tag="VFV26_02890"
     CDS             1427..4045
                     /gene="secA"
                     /locus_tag="VFV26_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX4845137.1"
                     /translation="MLDNILKKLIGSKNDRELKRLWAKVQTINVLEPEISALSDEALK
                     AKTPYFREKLASGATLDDILPEAFAVAREASKRVLKMRHFDVQLVGGMVLHEGKVAEM
                     RTGEGKTLTATLPLYLNALAGKGAHLVTVNDYLARRDAEWMGRLYTWLGLSIGIIQHG
                     LDDQERRDAYACDITYATNNELGFDYLRDNMKWDLAEFTQRGFVYAIVDEVDSILIDE
                     ARTPLIIAGSSEEDTSKYFRIDAIVPKLKAELHYKVDEKDRQVMLTDDGIHQAEQLLG
                     VANLYDPTSIETLHGLNQALLAHNLYRLDVDYMVRPKEDGKGMEVVIVDEFTGRLMPG
                     RRWSNGLHQAIEAKEGVEVNAENQTLATVTFQNFFRMYGKLAGMTGTAETEATELHSI
                     YKLDVIIVPTNMPMVRKDFADTVYATRAGKKKAIVEEIRDLHTKGQPVLVGTASIESS
                     EDLAEALKTARIPHVVLNAKHHEREAEIVAQAGRKGAVTIATNMAGRGTDIILGGNPE
                     GMARMEAKKKDIALYDEEGLETAEFSALVEQMRLQTAAEHEEVVSLGGLHILGTERHE
                     SRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRIFGGDRIKSLMGAMGMNDDEPIEAG
                     MVTRAIERSQKRVEAHHFEVRKHLLEYDDVMNKQRIFFYGLRTEILKGNTKDYVLRVA
                     VEIAEGIANDFLADKGERDQAGFRERVEQLFTLTGEEVDAIGQMPQAQATEALAALVQ
                     RFYEGKDERLGGDGMRSYERWSILQIIDAAWKRHLLVMDHLKEAIGFRGYGQKDPLVE
                     YKRESYEYFEQMRFGYEDEIISYLFRVEPQPAYVPDEGFFRGPSDTFELGPDEQGNPP
                     DGIQRVLRFTAGGLED"
     gene            4138..4989
                     /gene="rapZ"
                     /locus_tag="VFV26_02895"
     CDS             4138..4989
                     /gene="rapZ"
                     /locus_tag="VFV26_02895"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX4845138.1"
                     /translation="MELIVVTGLSGAGRHSVMGALEDSGCTALDNVPPRLLEPLLELE
                     SKLQPARDRLVVGMDSRQADFAQEFGPLLERLRTGNVPVQVVFVEAEDSALLRRYSET
                     RRPHHLALLGSAGEGIQRERQILAPIRAMATTILDTSSLSLSELRQRIAALVPQLPTR
                     STAVRLLSFGFKRGVPADADVVLDARFLPNPYYVEALKPLTGRDSAVREYLLEAPEFR
                     EFLERAEAWLRWSLPLVQQEGRAYHTLAIGCTGGQHRSVALVELLAHRLRRDVAALTV
                     RHRELDG"
     gene            complement(5017..6138)
                     /locus_tag="VFV26_02900"
     CDS             complement(5017..6138)
                     /locus_tag="VFV26_02900"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4845139.1"
                     /translation="MTHVVVLGAGRVGGAMAKDLAPDFQVTVADRSEGALARMREAGL
                     ATRPADLGTPQGVKAAVADADLVVGAVPGFMGFATAKAVLEAGKPLVDISFFDEDCFE
                     LDALAKSQNLTAIVDCGVAPGCGNIILADTLRQWDHVDSFECLVGGLPVVRTWPYEYK
                     AGFSPIDVIEEYTRPARYVKDGRTVTLPALSEPELLDFEGLGTLESFNTDGLRSLIRT
                     FPQVPDMKEKTLRYPGHIEKMRMLRESGFFQKEKIQVGGVQVSPLDLTTALLFPMWFM
                     QEGDEDFTVMRVTVAGLKNGQRMRREVCLLDRYDRATKTTSMARTTGYTCTAAVRLLA
                     KGGYSRKGISPPEFLGQEPGAWDFIRAELAKRGVVYTEE"
     gene            complement(6150..7565)
                     /locus_tag="VFV26_02905"
     CDS             complement(6150..7565)
                     /locus_tag="VFV26_02905"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX4845140.1"
                     /translation="MSATGYRRHVGLFSATMLIAGSMIGSGVFIVAADMVRTGGSGGF
                     LLAAWGLTAVLTLFAALSYGELAGMFPRAGGQYTYLREIYGPATGFLYGWTFFVVIEC
                     GTIAAVAVGFGKYLGSFFPAITDTAWIGPHLDVPVLNITQSIAVGPYHLGLTPSRLSG
                     IAVVLLLSAVNLYGVKLGSRIQDLFTVAKIGGLAALILLGLLLKPAVLPSQAPFIAPD
                     GAALPFLTALLVVQTGSMFSADAWNSITFIAGEVKEPERTIPYALLIGTTLVCGLYVL
                     ANAAYLNVLGPSGIAQAPQDRVGSAALQALLGSGGGLIMAGSILVSMFGCLNGLVLSG
                     ARVYQRMAEDGLFYPRAARLNGHGVPGFGLWIQALWTCLLTLTGTYGQLLDFVMLPTI
                     LFYVLAVGGVFLLRWRKPDLLRPVKVWGYPAVPALYLAGACGIIGALFLHRPSYSWPG
                     LALVALGWPVYLAVKPRAATA"
     gene            7613..8629
                     /gene="mltG"
                     /locus_tag="VFV26_02910"
     CDS             7613..8629
                     /gene="mltG"
                     /locus_tag="VFV26_02910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX4845141.1"
                     /translation="MARSSMSLRFLLATVILAGAPAAGGWWAWKGQGPLQQEATVLVK
                     RGTGINQIADQLERDGVIRSASLFKLWARARKLQLIRGEYTFTPRASLAEVAGKLRRA
                     EIHFTNVSIPEGAHAWAVQKRLKDFVPEEVFWTLWKSSRLAKTAGFEGAESLEGLVAP
                     ATYRLHHALEPEEVMLMLVEAFRDQIRPKLEGGPLPPYETLILASLVEKETKLPEEQP
                     KVAGVYKKRLDIGMRLQCDPTSLYARWLTGDLRFTAPLVQDIRRPHPFNTYTVKGLPP
                     TPIAIPGATALAAARAPETGKDLYFVATGRGGHSFAPSLRDHNRNVGVYRQEIARQRK
                     AARG"
     gene            8622..9401
                     /locus_tag="VFV26_02915"
     CDS             8622..9401
                     /locus_tag="VFV26_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEX4845142.1"
                     /translation="MAKLRLDLLLVQRGLCETRAKAQARILAGEVLVDDRPATKAGMA
                     VDEAAPIRLRGEPPPFVSRGGLKLAGALDRWPIDPSGRTCFDAGASTGGFTDCLLQRG
                     AAKVYAVDVGTNQLHWKLRSDARVVSMEQVNLRTWEPSQIPERCSLLVADLSFISLRL
                     AIPPVLPSLEPGADAVLLVKPQFEAGREDVGQGGIVRDPAVHRRVLVEAWTFFAGTGL
                     RPLDLAESPIKGGEGNVEFLMRLGLGAEAGDLGKALGALGF"
     gene            complement(9645..>10149)
                     /locus_tag="VFV26_02920"
     CDS             complement(9645..>10149)
                     /locus_tag="VFV26_02920"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4845143.1"
                     /translation="GFKAHWELGRRDGATLLCGGEAWTDGNRTERVLGPVGHGHYMQP
                     CVWEGVVPSMELFHKQVLGPTVNLVPVADIDEALACVHAAPCGLSASLYTEDRRCIER
                     FRREARAEVLNLNTGGTGLRENGPWDLDWHTRWQTVHETAPGPIQAVPAHAAKGKPRP
                     LTDWTGL"
BASE COUNT         1687 a         3431 c         3539 g         1492 t
ORIGIN      
        1 ccggcaaccc ggaggtttcc ggcgtggcct cccaggtgga gaaggacctg gaagcggcgg
       61 gcttcgaggt gctgcacgac gaccgcgagg gcatgagccc cggcgccaag ttcaaggacg
      121 cggacctgct gggcttcccc ctgcgcctca tcgtgggcgc caagggcctc aaggacggca
      181 tcgtggaact gcgggaccgc cgcaccaagg aggtcgtcaa gctcaagccc gaggccgccg
      241 tggccgaggt ctccgcggcc cgggaccgca tcatgcagga actggaaacc gcgggaggcc
      301 gctgatggga ggtcgctgat ggccgagggc cgggtccacc tcaccacctt catcgaaggg
      361 gtgctggtcc atggccagca gacgcccttc gtcctgctgg tgccctcgcc ccacagcccc
      421 catcgcggcc tgctcatgcc ggcccagatc ccctggtcgc cgggcttcct gcccacggcc
      481 ctgctgaacg cccagatcga agccggctgg ggcatgccct tccggttcgt ggacaactcc
      541 acccttcccg tggtcttcga cgagcgcacc agccgcctgc ccacgccctg gctgctgcgg
      601 ctggagggcc tcgaggggca gcaacgcctc tacctcagcc acctgctcca caccaaggcc
      661 cccgaggatc tgctgccccc accccccccg ggcggccagt ggtacagcga caagggcctc
      721 cagaacgccg atctgctgcc gggcgtgcgg cgcctctgcc aggcggccct gcagacggtg
      781 atggaagggt gaggttcccg ccttcgcccg ttcatacgaa aatcggcgcc agcggcgccg
      841 attttcgcag gggccgcgcc ccaggaatca gaactgctcg aaggcgttga agaagtagct
      901 gacctcgaac ctggcgctct cgggcttgtc gctgccgtgg gtggcgttgc ggccgatgct
      961 ggcgccgaag cgcttgcgga gggtgccttc ggcggcgttg gcggggttgg tggcgcccat
     1021 gaggtcgcgc cagcgcagga tggcgttctc gccttcgagc accatgatgg ccacggggcc
     1081 ctcggtcatg aaggcctcca gctcggcgta gaagcccttg cccacgtgct cgtggtagaa
     1141 gccctggcag atggcggggg tgagccgggt cagcttgagg cccacgacct tgaggccgct
     1201 ctgctcgatg gcggtgagga tttcgcccat gtggccgtcc tggacggcgt cgggcttgac
     1261 gatagcaaag gtgcgctcaa aggccatgat ttctccagaa tccaaacaat cagtgtgccc
     1321 tggagcgttg gcttcggcaa ccgtggggac ttgcaggcgg cctccagcgc tgggaaacgg
     1381 gaatcctccg cgctacaatc gacggtttac gcgactggac ggctccatgc tcgacaacat
     1441 tctcaagaaa ctcatcggct ccaagaacga ccgggagctg aaacggctct gggccaaggt
     1501 ccagacgatc aacgtcctgg agccggagat ctcggccctg agcgacgagg ccctgaaggc
     1561 caagacgccc tacttccggg agaagctggc cagcggggcc acgctggacg acatcctgcc
     1621 cgaggccttt gccgtggccc gcgaggccag caagcgcgtc ctcaagatgc ggcacttcga
     1681 tgtgcagctg gtgggcggca tggtgctgca cgagggcaag gtggccgaga tgcgcaccgg
     1741 cgagggcaag accctcaccg ccaccctgcc gctctacctg aacgccctgg cgggcaaggg
     1801 cgcccatctc gtcaccgtga acgactatct ggcccggcgc gacgccgagt ggatgggccg
     1861 cctctacacc tggctgggcc tttccatcgg catcatccag cacgggctcg atgaccagga
     1921 acgccgcgac gcctacgcct gcgacatcac ctacgccacc aacaacgaac tgggcttcga
     1981 ctacctccgc gacaacatga agtgggacct ggcggagttc acccagcgcg gcttcgtgta
     2041 cgccatcgtg gacgaagtgg actccatcct catcgacgag gcccgcaccc ccctcatcat
     2101 cgcgggcagc agcgaagagg acacttccaa gtacttccgc atcgatgcga tcgtccccaa
     2161 gctcaaggcc gagctccatt acaaggtgga cgagaaggac cgccaggtga tgctgacgga
     2221 cgacggcatc caccaggcgg agcagctgct gggcgtggcg aacctctacg accccaccag
     2281 catcgagacc ctgcacggcc tcaaccaggc cctgctggcc cacaacctct accgcctgga
     2341 cgtggactac atggtccgcc ccaaggagga tggcaagggc atggaagtgg tcatcgtgga
     2401 cgagttcacg ggccgtctga tgccgggccg ccgctggtcc aacggtctgc accaggccat
     2461 cgaggccaag gagggcgtgg aggtcaacgc cgagaaccag acgctcgcca ccgtgacctt
     2521 ccagaacttc ttccgcatgt acggcaagct ggccggcatg acgggcacgg cggagaccga
     2581 ggctacggaa ctgcactcca tctacaagct ggacgtgatc atcgttccca ccaacatgcc
     2641 catggtccgc aaggatttcg cggacacggt gtacgccacc cgcgccggga agaagaaggc
     2701 catcgtggag gagatccggg acctgcacac caagggccag ccggtcctgg tgggcacggc
     2761 cagcatcgag agcagcgaag acctggccga ggcgctcaag accgcccgca tcccccatgt
     2821 ggtgctgaac gccaagcacc atgagcggga ggccgagatc gtggcccagg cgggccgcaa
     2881 gggcgccgtc accatcgcca ccaacatggc ggggcgcggc acggacatca tcctgggcgg
     2941 caatcccgag ggcatggccc ggatggaagc caagaagaag gacatcgccc tctacgacga
     3001 ggagggcctc gagacggccg agttctccgc cctcgtggag cagatgcgcc tgcagaccgc
     3061 ggccgagcac gaggaggtgg tctccctggg gggcctgcac atcctcggca ccgagcgcca
     3121 cgaaagccgc cgcatcgaca accagctccg cggccgcgcc ggccgccagg gcgaccccgg
     3181 cagcagccgc ttctacctgt ccctcgagga cgacctgatg cggatcttcg gcggcgaccg
     3241 catcaagagc ctcatgggcg ccatgggcat gaacgatgac gagcccatcg aggcgggcat
     3301 ggtgacgcgg gccatcgagc gcagccagaa gcgcgtggaa gcccaccact tcgaggtccg
     3361 caagcacctg ctcgagtacg acgatgtgat gaacaagcag cgcatcttct tctacgggct
     3421 gcgcacggag atcctcaagg gcaacaccaa ggactacgtg ctgcgcgtgg ccgtggagat
     3481 cgccgagggc atcgccaatg acttcctggc ggacaagggc gagcgcgacc aggcgggctt
     3541 ccgcgagcgg gtggagcagc tcttcaccct gactggcgaa gaggtggacg ccatcggcca
     3601 gatgccccag gcccaggcca ccgaggccct tgccgccctg gtgcagcgct tctacgaggg
     3661 caaggacgag cgcctgggcg gagacggcat gcgcagctac gagcgctggt ccatcctcca
     3721 gatcatcgac gccgcctgga agcgccacct gctggtcatg gaccatctga aggaggccat
     3781 cggcttccgc ggctacggcc agaaggaccc gctggtggag tacaagcgcg aaagctacga
     3841 gtacttcgag cagatgcgct tcggctacga ggacgagatc atttcgtatc tcttccgcgt
     3901 ggagccccag ccggcctacg tgccggatga aggcttcttc cgcgggccct cggacacctt
     3961 cgagctgggc cccgacgaac agggcaatcc cccggacggc atccagcgcg tgctgcgctt
     4021 caccgccggc gggttggaag actgaacctt ttcgattttt cttaccagca aaacgcgggg
     4081 gcccaggccc ccgcgttttg ctggaggccg gacttctggc cctggtaggg tgctgctatg
     4141 gaactcatcg tggtcacggg actttcgggc gccgggcgcc actcggtgat gggcgccctg
     4201 gaggacagcg gctgcacggc cctggacaat gtcccgcccc gcctgctcga acccctgctc
     4261 gagctggaat ccaagctcca gcctgcccgc gaccgcctgg tggtgggcat ggacagccgg
     4321 caggcggact tcgcccagga gttcggcccg ctgctggagc gcctccgcac cggcaatgtg
     4381 ccggtccagg tggtgttcgt ggaggccgag gacagcgccc tgttgcgccg ctactcggaa
     4441 acccggcgcc cccaccatct ggctctgctg ggctcggcgg gcgagggcat ccagcgcgag
     4501 cgccagatcc tggcccccat ccgcgccatg gccacgacca ttctcgatac cagtagcctt
     4561 agcctgtcgg aactgcgcca gcgcatcgcg gccctggtgc cccagctgcc cacccgcagc
     4621 actgccgtgc ggctgctcag cttcggcttc aagcgggggg tgcccgcgga tgcggacgtg
     4681 gtcctcgacg cccgcttcct gcccaatcca tattatgtcg aggcgctgaa gcccctgacg
     4741 gggcgcgatt cggccgtgcg ggagtacctg ctggaggccc cggaattccg ggagtttctg
     4801 gagcgggccg aagcctggct gcgctggtcc ctgccgctgg tgcagcagga gggccgcgcc
     4861 taccacacgc tggccatcgg ctgcaccggg ggccagcacc gttccgtggc cctggtggag
     4921 ctgctggccc accggctccg gcgggatgtg gcggccctca ccgtccggca tcgcgaactg
     4981 gacggttagg gcccttcttc aaagcgggcg cgagccctac tcctcggtgt agacaacgcc
     5041 gcgcttcgcc agttccgcgc ggatgaagtc ccaggcgccc ggctcctgcc ccaggaattc
     5101 cggcgggctg atgcccttgc gcgaataccc gcccttggcc agcagccgca cggccgcggt
     5161 gcaggtgtag ccggtggtcc gggccatgga ggtggtcttc gtggcccggt cgtagcggtc
     5221 gagcaggcac acctccctgc gcatcctctg gccgttcttg aggcccgcca cggtgacgcg
     5281 catgaccgtg aaatcctcgt cgccctcctg catgaaccac atggggaaga gcagggcggt
     5341 ggtgaggtcc agggggctga cctggactcc gcccacctgg atcttctcct tctggaagaa
     5401 tccggattcc cgcagcatgc gcatcttctc gatgtggccc gggtagcgga gggtcttctc
     5461 cttcatgtcc gggacctggg gaaaggtgcg gatgaggctg cggaggccgt ccgtgttgaa
     5521 ggattccagc gtgcccaggc cttcaaaatc cagcagctcc ggttcggaaa gggcgggcag
     5581 cgtcaccgtc cggccatcct tcacgtagcg ggcggggcgg gtgtactcct cgatgacatc
     5641 gatggggctg aagccggcct tgtactcgta gggccaggtc cgcaccacgg gcaggccgcc
     5701 caccaggcat tcgaaggaat ccacgtgatc ccactgccgg agggtgtcag ccaggatgat
     5761 gttgccgcag cccggggcca ccccgcagtc cacgatggcc gtgaggttct gagacttcgc
     5821 cagggcgtcg agctcgaagc agtcctcgtc gaagaaggag atgtccacca ggggctttcc
     5881 ggcctccagc accgccttgg cggtggcgaa gcccatgaag ccgggcaccg cgcccaccac
     5941 gaggtccgcg tccgccacgg cggccttcac gccctggggc gtgcccaggt ccgcgggccg
     6001 ggtggcgagg ccggcctcgc gcatgcgggc gagggcgcct tcggagcggt ccgccaccgt
     6061 gacctggaaa tccggggcca ggtctttggc catggcgccg cccacgcggc cggcaccgag
     6121 aacgacgaca tgggtcatgg aaggctcctt caggcagtgg cggcgcgggg tttcaccgcg
     6181 aggtagacgg gccagcccag ggccaccagg gccaggcccg gccaggaata gctgggacgg
     6241 tggaggaaca gtgccccgat gattccacag gccccggcca ggtagagggc cggaaccgct
     6301 ggatagcccc agactttgac ggggcgtaaa agatccggct tccgccagcg cagcaggaag
     6361 accccgccca cggcgaggac gtagaacagg atcgtgggca gcatgacgaa gtccagcagc
     6421 tggccgtagg tgcccgtgag ggtgagcagg caggtccaga gggcctggat ccagaggccg
     6481 aagcccggga cgccgtgccc gttgaggcgg gcggcccgcg ggtagaagag gccgtcctcc
     6541 gccatgcgct ggtagacccg cgccccggac agcaccaggc cgttgaggca gccgaacatg
     6601 gagacgagga tgctgcccgc catgatgagc ccgccgccgc tgcccagcag ggcctggagc
     6661 gcggcgctgc ccacgcggtc ctggggcgcc tgggcgatgc cggaggggcc cagcacgttc
     6721 aggtaggccg cgttggccag cacgtagagg ccgcagacga gcgtggttcc gatgagcagg
     6781 gcgtagggga tggtccgctc gggctccttc acctctccgg cgatgaaggt gatggaattc
     6841 caggcgtccg ccgagaacat gctgccggtc tgcaccacca ggagggccgt gaggaagggc
     6901 agggcggcgc cgtccggggc gatgaagggg gcctgggagg gcaggacggc gggcttcagc
     6961 agcaggccca gcaggatcag ggcggccagg ccgccgatct tggccacggt gaagagatcc
     7021 tggatgcggg agcccagctt cacgccgtag aggttcacgg cgctgagcag cagcaccacg
     7081 gcgatgccgg acaggcgcga gggcgtgagc cccaggtggt acggccccac ggcgatggac
     7141 tgcgtgatgt tcagcaccgg cacgtccagg tgggggccga tccaggccgt gtccgtgatg
     7201 gccggaaaga agctgcccag gtacttgccg aagcccacgg ccacggcggc gatggtgccg
     7261 cattcgatga ccacgaagaa ggtccagccg tagaggaagc cggtggcggg gccgtagatc
     7321 tcgcggaggt aggtgtactg gcccccggcc cgggggaaca tcccggccag ttcgccatag
     7381 ctgagggccg cgaagagggt cagcaccgcc gtgagtcccc aggccgccag caggaagccg
     7441 ccggaacccc cggtgcgcac catgtccgcc gcgacgatga aaacgccgct gccgatcatg
     7501 gagccggcga tgagcatggt ggccgagaac aggccgacat ggcggcggta gccggtggcg
     7561 ctcatacgtt ccttgggtgg atggatccac gctaccacgg cattctgaag gcatggcgcg
     7621 atcttccatg tccctccggt tcctcctggc cacggtcatt ctggcggggg ctcccgccgc
     7681 gggtggctgg tgggcctgga aggggcaggg gcccctgcag caggaggcca cggtcctggt
     7741 gaagcggggg accggcatca accagatcgc ggaccagctg gagcgggacg gcgtgatccg
     7801 ctcggcctcg ctcttcaaac tctgggcccg ggcccgcaag ctccagctca tccggggcga
     7861 gtacaccttc acgccccggg ccagcctggc ggaggtggcc ggaaaactcc ggcgggcgga
     7921 gatccacttc acgaatgtgt ccattcccga gggggcccac gcctgggccg tgcagaagcg
     7981 cctcaaggac ttcgtgcccg aggaggtctt ctggaccctc tggaagagtt cccggctggc
     8041 gaagaccgcg ggcttcgagg gcgccgagag cctcgaaggc ctggtggccc cggccaccta
     8101 ccggttgcac cacgccctgg agcccgagga ggtcatgctc atgctggtgg aggccttccg
     8161 ggaccagatc cggccgaagc tggagggcgg tccgctgccg ccctacgaga ccctgatcct
     8221 ggccagcctg gtggaaaagg agacgaagct gccggaagag cagccgaagg tggccggggt
     8281 ctacaagaag cgcctcgaca tcggcatgcg cctccagtgc gaccccacca gtctttacgc
     8341 ccgctggctc accggcgatc tgcgcttcac ggccccgctg gtgcaggaca tccgccggcc
     8401 gcaccccttc aacacctaca cggtgaaggg cctgccgccc acgcccatcg ccattcccgg
     8461 cgccacggcc ctggccgccg ccagggcgcc cgagaccggg aaggatctct acttcgtggc
     8521 cacgggccgg ggcggccaca gcttcgcccc cagcctgcgg gaccacaacc ggaacgtggg
     8581 ggtctaccgc caggagatcg cccggcagcg gaaggccgcc cgtggctaag ctgcgcctgg
     8641 acctgctgct cgtgcagcgc ggcctgtgcg agacccgcgc caaggcccag gcccgcatcc
     8701 tcgccggcga ggtgctggtg gatgaccgcc cggccaccaa ggcgggcatg gccgtggacg
     8761 aggcggcgcc catccgcctg cggggcgagc caccgccctt cgtaagccgg ggcgggctga
     8821 agctggccgg ggccctggac cgctggccca tcgacccctc gggccgcacc tgctttgacg
     8881 ccggcgccag caccggcggg ttcactgact gcctgctcca gcgcggcgcc gcgaaggtct
     8941 acgccgtgga cgtgggcacc aaccagctcc actggaagct ccgcagcgat gcgcgggtgg
     9001 tgtccatgga gcaggtgaac ctgcgcacct gggagccctc ccagattccc gagcggtgca
     9061 gcctgctggt ggcggatctg agcttcatct ccctgcgcct ggccattccg ccggtgctgc
     9121 cgagcctgga gcccggggcc gacgcggtgc tgctggtgaa gccccagttc gaggccgggc
     9181 gcgaggacgt gggccagggc ggcatcgtgc gcgatcccgc cgtccaccgg cgcgtgctgg
     9241 tggaggcctg gaccttcttc gcgggcaccg gcctgcggcc cctggatctg gccgaaagcc
     9301 ccatcaaggg cggcgagggg aatgtggaat tcctgatgcg gttggggctg ggcgcggagg
     9361 ccggagatct cgggaaggcg ctgggggcgc tgggcttttg agcccggttg gctctcgatc
     9421 gttaaggatc caccacggag gcacggagca tgggctcacg agaggggccg gtcccggatc
     9481 cttcatggat gtccgggacc ggcccctccc gtggcttccg gcaaggccgg aagcggcccc
     9541 cagcccgccc atgatggagg ggcgcggaga tctctgttct ccctccgcgg cctcagtgtc
     9601 tccgtggtgg tgtatttttg aacgcgacct ggtctgatcc cggatcagag gccggtccaa
     9661 tcggtcaggg gccggggctt gcccttggcg gcgtgggctg gaacggcctg gatggggcct
     9721 ggcgcggtct catggacggt ctgccagcgg gtgtgccagt ccaggtccca ggggccgttc
     9781 tcgcgaagac cggtgccgcc cgtgttgagg ttcagcacct cggcccgggc ttcgcgccgg
     9841 aagcgctcga tgcagcggcg gtcctcggtg tagaggctgg cggagagacc gcagggcgcg
     9901 gcgtggacgc aggccagcgc ctcgtcgatg tccgccaccg ggacgaggtt caccgtgggg
     9961 ccgaggacct gcttgtggaa gagctccatg gaggggacca cgccctccca cacgcagggc
    10021 tgcatgtagt ggccgtggcc gacgggcccc agcacccgct ccgtgcggtt gccgtccgtc
    10081 caggcctcgc cgccgcagag cagcgtggcg ccgtcccggc ggcccagctc ccagtgggcc
    10141 ttgaagccc
//
LOCUS       DASUDT010000137         2631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_272321, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000137 DASUDT010000000
VERSION     DASUDT010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272321"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            280..1248
                     /locus_tag="VFV26_02925"
     CDS             280..1248
                     /locus_tag="VFV26_02925"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4845144.1"
                     /translation="MLSKDQTLGKYQILDRLGSGGFGAVYLAMDTWVNRKVALKVPHQ
                     QQDEIVDLLKEPRIMAGLKHPNIVELITVERKNGIFFMVLEYIDGEGLDRFIRRERSL
                     PPARALEIGLDVCSAIAFAHGHQILHRDLRPANILMTKEGIAKVTDFGTSRVLELQHV
                     PYAPTRIGSPPYMAPEHFRGRAVFQSDLWSLGITLYEMLTGTVPFYDADPLKIAQAFT
                     SQQILAPHLRNPIVPKAFSEVVMKALAVNLGERYLSAQALLEALRRLKDSVARETRPL
                     GTAVLSTSTSGPHPTLRAATQSRLCRFCYRQLPRMAMTCPNCGEKN"
     gene            1252..>2631
                     /locus_tag="VFV26_02930"
     CDS             1252..>2631
                     /locus_tag="VFV26_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845145.1"
                     /translation="MIWHPTKDAVRRLWGRRWVRRVSYVLVAGAATVTVVPWVATRPA
                     VLHWTVSKIEALVRDETGLPLEIGQLEVHPILGYASLRNVRLGGDLLTVRKVEVQADL
                     LSLFSSTPRIYSIRMEHPHVRLTEAGLSAIRLKERPPRKGPLPQVRLDLFSLTGGEIE
                     IPEPLRGLPPLRYQFEMKATGSGPNQVRMDLAGPQLAVKGPQGWEKGRLDLNGEASEA
                     FLALKEGYLRLGESQVRLSGRFDVKSAQKPERLEAQLTGVLGLAQTARWGGASRPPIA
                     GSLDLEATVRGTLAAPEWTFHAEGAGLQLAAPGFLPGSLELRSRGSLDRIHLGHLRWH
                     SAQGDLGLEAEWSSKTPATATLSGQALDLEALGRVFKLSEFQGVRGTLMAKLEGPQDP
                     ASLSRPDRWQASFQLGLSQHGLEAGILRATLRQGRATLDQLRLDLEALKGDGTGWADL
                     DSRGLVRLEA"
BASE COUNT          430 a          971 c          815 g          415 t
ORIGIN      
        1 ggcgaatttg tgagtcatcc gaaggatgcg aacaggattc gccacccacg ctattccaag
       61 acactcaaag cgttcctcgg ctgaacgcga gagccatgcc tgggtgggtc ggcgaatttg
      121 tgagtcatcc gaaggatgcg aacaggattc gccacccgcg ctattccaag acactcaaag
      181 cgttcctcgg ctgaagctcg ttccggccgt tcgaaaaagc cccgcccccg gcggggcttt
      241 ttcggtcatc ctgaacccat cgcttcggag cccgcgcccg tgctatccaa ggaccagacc
      301 ctgggcaaat accagatcct ggaccgccta gggtccggcg gattcggcgc cgtctacctg
      361 gccatggaca cctgggtgaa ccgcaaggtg gccctgaaag tgccccacca gcagcaggac
      421 gagatcgtgg atctgctgaa ggagccccgc atcatggcgg gcctgaagca tcccaacatc
      481 gtcgagctca tcaccgtcga acggaagaac ggcatcttct tcatggtgct ggagtacatc
      541 gacggcgagg gcctcgaccg cttcatccgc cgcgaacgca gcctgccgcc ggccagggcc
      601 ctggagatcg gcctggacgt ctgcagcgcc atcgcctttg cccacggcca tcagatcctc
      661 caccgggacc tgcgccccgc caacatcctg atgaccaagg aaggcatcgc caaggtcacg
      721 gatttcggca cctcccgggt gctggagctg cagcacgtcc cctacgcccc cacgcgcatc
      781 ggctcgcccc cctacatggc gccggagcat ttccggggcc gggccgtgtt ccagtcggac
      841 ctctggtccc tgggcatcac gctctacgag atgctcacgg gcaccgtgcc gttctacgac
      901 gccgatcccc tcaagatcgc ccaggccttc accagccagc agatcctggc gccccacctc
      961 cgcaacccca tcgtgcccaa ggccttctcc gaagtcgtca tgaaggccct ggccgtgaac
     1021 ctgggcgaac gctacctgtc ggcgcaggcc ctcctcgaag ccctgcggcg cctcaaggac
     1081 agcgtggccc gcgagacccg ccccctgggc actgcggtcc tgtccacgtc cacctcgggt
     1141 ccccacccca cgctccgggc agccacccag tcccgcctct gccgcttctg ctaccgccaa
     1201 ctgccccgca tggccatgac ctgccccaac tgcggcgaaa agaactagct gatgatctgg
     1261 caccccacca aggatgcggt acggcggctc tggggccgcc gctgggtgcg gcgcgtgtcc
     1321 tacgtcctgg tggcgggcgc cgccaccgtg accgtggtcc cctgggtggc gacccggcct
     1381 gcggtcctgc actggaccgt ctcgaagatc gaggccctcg tgcgcgacga gacgggtctg
     1441 cctcttgaga tcggacagct ggaggtccac cccatcctcg gctacgcctc gctgcggaac
     1501 gtgcgcctgg gcggggacct gctcaccgtg cggaaagtgg aggtccaggc cgatctgctt
     1561 tccctctttt cctcgacgcc tcggatctat tccatccgga tggagcatcc ccatgtccgc
     1621 ctcacggaag ccggcctgtc cgccatccgc ctgaaggaac ggcctccgcg gaaaggcccc
     1681 ctgccccagg tgcggctgga tctgttcagc ctcacgggag gcgagatcga gatccccgag
     1741 ccgctgcggg gcctgccccc cctgcgctac cagttcgaaa tgaaggccac ggggtcgggg
     1801 cccaaccagg tgcggatgga cctcgcaggc ccccagctgg ccgtgaaggg cccccagggt
     1861 tgggaaaagg ggcgcctgga cctgaatgga gaagcctccg aggccttcct cgccctcaag
     1921 gagggctacc tccgcctggg cgaaagccag gtccgcctca gcggccgctt cgatgtcaag
     1981 tcggcccaga agccggaacg actggaggcc cagctcacgg gagtcctcgg cctggcccag
     2041 accgcccgct ggggcggcgc ctcccggcct cccatcgcag gcagcctgga cctcgaggcc
     2101 acggtgcgcg ggaccctcgc ggcgcccgag tggaccttcc acgccgaagg cgcgggcctc
     2161 cagctggcgg ccccgggctt cctcccgggc agtctcgagc tgcgcagccg gggcagtctg
     2221 gaccgcatcc acctgggtca tctccgctgg cattcggctc agggagacct cggcctggaa
     2281 gcggagtggt ccagcaaaac ccccgccaca gccacccttt ccggacaggc cctggatctc
     2341 gaagcccttg gccgggtgtt caagctgtct gagttccagg gcgtccgcgg caccttgatg
     2401 gcgaagctgg aagggcccca ggatcccgcc tccctcagcc ggcccgatcg ctggcaggct
     2461 tccttccagc tgggcctgag ccagcacggc ctggaggctg gaatccttcg cgccaccctg
     2521 agacaggggc gggccaccct ggaccagctc cgcctcgacc tggaggccct caagggtgac
     2581 ggtaccggct gggccgactt ggattcccgc gggctggtcc gcctggaggc c
//
LOCUS       DASUDT010000138         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1774747, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000138 DASUDT010000000
VERSION     DASUDT010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774747"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /gene="gcvPB"
                     /locus_tag="VFV26_02935"
     CDS             complement(<1..1525)
                     /gene="gcvPB"
                     /locus_tag="VFV26_02935"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX4845146.1"
                     /translation="MFLRQREPLSFDRSVPGKRGMDLPRLDVPAAKDTRPAHLKRSGF
                     DALPELSEVEVIRHFTRLSKWNYGVDDGIYPLGSCTMKHNPRLNEKVAGMPGFTDSHP
                     MAPDALVQGNLEMLFTLQEWLKEITGLPGVTLQPSAGAAGELTGVMLIRAYHVSKGAK
                     RRVILIPDSGHGTNPATAAMAGYEVVELPSLPDGTISFDDVTDPVNGKVRKGLKTLVA
                     ELGTEIAGAMITNPNTVGVFEYRFKEISDLLHSVDALVYMDGANMNALVGVARPGDFG
                     VDVMHLNLHKTMSTPHGGGGPGAGPVCCGANLVPFLPVPVVQRDTVKVGEGEVPKHSY
                     RLDWNQPQSIGKVHTFHGNFGILVRALTYCLSHGSDGLKEATLRAIVNANYIRARLKD
                     AYALHIDSPSLHEVVFSDTLQAKHDVHTLDIAKRLVDHGYHPPTIYFPLIVPGALMIE
                     PTESEGKDELDAFCDTMLAIAKEAGENPDALHQAPTLAPMRRMDETTAARKPVLRWTK
                     "
     gene            complement(1536..>2334)
                     /locus_tag="VFV26_02940"
     CDS             complement(1536..>2334)
                     /locus_tag="VFV26_02940"
                     /inference="COORDINATES: protein motif:HMM:NF014408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845147.1"
                     /translation="LKDGVTDLADLQAKLNGDVAAVLVGYPNFLGAVEDLTALAGPVH
                     AAGALLVSVTQEAFAFGWFEAPGKAGADMACGEAMSLGNKPNFGGPFLGFLAVKDAHK
                     REIPGRVVGQTKDLDGKTGYVLTLTAREQHIRRDKATSNICSNQGLVALRANLFMQLA
                     GPEGLKGLAEQNAAKAQYLRQRLLELPDMQPVDDQPFFNEFVLRYTGDYAALQEACLK
                     ESLLPGLDLGRFYPEYQGCILWCATELHTRQMIESLVEILARVPATV"
BASE COUNT          319 a          721 c          880 g          414 t
ORIGIN      
        1 ccttcgtcca ccgcagcacg ggcttgcggg cggcggtggt ctcgtccatg cggcgcatgg
       61 gggccagcgt cggggcctgg tgcagggcgt ccgggttttc ccctgcttcc ttcgcgatgg
      121 ccagcatggt gtcgcagaag gcgtccagct cgtccttgcc ttcgctttcc gtgggctcga
      181 tcatcagggc gccgggcacg atgaggggga agtagatcgt gggcgggtgg tagccatggt
      241 cgacgaggcg cttggcgatg tccagggtgt ggacatcgtg cttggcctgg agggtgtcgg
      301 agaagaccac ctcgtggagg ctgggggaat cgatgtgcag ggcgtaggcg tccttcaacc
      361 gggcgcggat gtagttggcg ttcacgatgg cgcggagcgt cgcctccttc aagccgtcgg
      421 aaccgtggct caggcagtag gtcagcgccc gcaccaggat cccgaagttg ccgtggaagg
      481 tgtgcacctt gccgatgctc tggggctggt tccagtccag gcggtagctg tgcttcggca
      541 cttcgccctc acccaccttc acggtgtcgc gctggaccac gggcaccggc aggaagggca
      601 cgaggttcgc gccgcagcag acggggccgg cgccggggcc gccgccgccg tggggcgtgg
      661 acatggtctt gtgcaggttc aggtgcatga cgtccacgcc gaagtcgccg ggccgggcca
      721 cgcccaccag ggcgttcatg ttggcgccgt ccatgtagac cagggcgtcc acgctgtgca
      781 gcaggtcgct gatctccttg aagcggtact cgaagacgcc gaccgtgttg gggttggtga
      841 tcatggcgcc ggcgatctcg gtgccgagtt ccgccaccag ggtcttgaga cccttgcgga
      901 ccttgccgtt cacgggatcg gtcacgtcgt cgaagctgat ggtgccatcc ggcagggagg
      961 gcagctccac cacctcgtag cccgccatgg cggcggtggc gggattggtg ccgtggccgc
     1021 tgtcggggat gaggatcacg cggcgcttgg cgcccttgga cacgtggtag gcgcggatga
     1081 gcatgacgcc cgtgagctcg ccggcggcgc ccgcgctggg ctggagggtg acgccgggca
     1141 ggcccgtgat ctccttcagc cattcctgca gggtgaagag catctccagg ttgccctgga
     1201 cgagggcgtc cggcgccatg gggtggctgt ccgtgaagcc cggcatcccg gcgaccttct
     1261 cgttgagccg cgggttgtgc ttcatggtgc agctgcccag cgggtagatg ccgtcgtcca
     1321 cgccgtaatt ccacttggag aggcgcgtga agtggcggat gacctccacc tcgctcagct
     1381 ccggcagggc gtcgaagccg ctgcgcttga ggtgggcggg gcgggtgtcc ttggccgccg
     1441 ggacgtcgag cctgggcagg tccatgcccc gcttgccggg gacggagcgg tcgaaggaga
     1501 ggggttcgcg ctgacgaaga aacatgtcgc tctccttaca cggtggcggg gacgcgggcc
     1561 aggatctcga cgaggctttc gatcatctgg cgggtgtgga gttccgtggc gcaccagagg
     1621 atgcagccct ggtattcggg gtagaagcgg cccaggtcca ggcccggcag caggctctcc
     1681 ttcaggcagg cctcctgcag cgcggcatag tcgccggtgt agcgcagcac gaactcgttg
     1741 aagaagggct gatcgtccac gggctgcatg tcgggcagct ccagcaggcg ctggcgcagg
     1801 tactgggcct tggcggcgtt ctgttcggcg agacccttga gtccttcggg gcccgcgagc
     1861 tgcatgaaga ggttggcgcg cagggcgacg aggccctggt tcgagcagat gttgctggtg
     1921 gccttgtcgc ggcggatgtg ctgctcgcgg gcggtgagcg tcagcacgta gccggtcttg
     1981 ccgtccagat ccttcgtctg gcccaccacg cggccgggga tctcgcgctt gtgggcgtcc
     2041 ttcaccgcca ggaagcccag gaaggggccg ccgaagttgg gcttgttgcc caggctcatg
     2101 gcctcgccgc aggccatgtc ggcgccggcc ttgccgggcg cctcgaacca gccgaaggcg
     2161 aaggcctcct gggtgacgct caccagcagg gcgccggcgg catggacggg cccggccagg
     2221 gccgtgaggt cctccaccgc gcccaggaag ttggggtagc ccaccagcac cgcggccacg
     2281 tcgccgttga gcttggcctg caggtcggcc aggtccgtca cgccgtcctt cagg
//
LOCUS       DASUDT010000139         2452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_471264, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000139 DASUDT010000000
VERSION     DASUDT010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471264"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..1000
                     /gene="kdsB"
                     /locus_tag="VFV26_02945"
     CDS             215..1000
                     /gene="kdsB"
                     /locus_tag="VFV26_02945"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003950.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEX4845148.1"
                     /translation="MRTLAVLPSRFQASRFPGKPLALIAGKPMIQWVFEAARRAQGVD
                     RVVVATDDERIAATVRGFGGEALMTDPALPSGTDRAAAALAALGESYDCVLNIQGDEP
                     AMHPETVAALVGLMRDQPDLPMGTAACPFAHADELFNPNAVKVVVDDHQRALYFSRSP
                     IPYLRHSSIFEPDFRPWMKPEQLSHFKRHLGLYAYRPDTLRAFTQLPPHPLEQLEMLE
                     QLRALAAGIPIGVADTPFLSLGVDVPSDVAAAEALLRERGLAR"
     gene            1047..2015
                     /gene="trxB"
                     /locus_tag="VFV26_02950"
     CDS             1047..2015
                     /gene="trxB"
                     /locus_tag="VFV26_02950"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEX4845149.1"
                     /translation="MSHHKVVVIGTGPAGYTAALYTSRANLAPLVFEGVQPGGQLTIT
                     TEVENFPGFRQGIAGPALMDEMREQVLRFGTTIKAETVLKADFQARPFKLTTDKGEYT
                     ADAVIIATGASAKWLGIGKDEQLSRSGGGVSACATCDGFFFRGKEIAVVGGGDTAIEE
                     AVFLTKFATRVHLIHRRDKLRASKAMQDRALQNEKIQPLWNKTVLDVLTTLHETPMGE
                     KVEKIRALKLKDTVDGSESELPVEGLFVAIGHQPNTSLFAGQLPMDETGYLHVEKGSS
                     RTTIPGVFACGDVQDHVYRQAITAAGSGCMAAIDAERWLAEQGLAE"
     gene            2029..>2452
                     /locus_tag="VFV26_02955"
     CDS             2029..>2452
                     /locus_tag="VFV26_02955"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX4845150.1"
                     /translation="MNEQHLEPLKRHPEGRALRAEVDLGRIARNLGRIRAAAGGREIW
                     AVVKANAYGHGAVPVGRALAAAGAHGLAVSSLEEGLELRQGSIECPILVLGGLRPEAL
                     AAASAENLAIALVGPEHLEDYARLLPRHPVRLHLKLDTG"
BASE COUNT          400 a          918 c          785 g          349 t
ORIGIN      
        1 gaagagggcg ttcaccgaag cctggaccac atgcgcaggc ggggaggact tcaaggtggc
       61 aagggattcc cgggcctgcc cgaacaggtc ctcgcattcc gcccagacat cgtcgaagga
      121 tgggtccaaa agggaactcc cgatcccccg gcatcggcag aggtggctgg agtctggagt
      181 ctggagtcca gaggcactgc cttacactga ttccatgcgc accctcgccg tcctgccctc
      241 ccgtttccag gcctcgcgct tcccgggcaa gcccctggcc ctcatcgccg gaaagcccat
      301 gatccagtgg gtgttcgagg ccgcccggcg agcccagggc gtggaccggg tggtggtggc
      361 cacggatgat gagcgcatcg ccgccaccgt ccgtggattc ggaggcgagg cactgatgac
      421 cgaccccgcc ctgccctccg gcacggaccg cgccgccgcg gccctggcgg ccctgggcga
      481 atcctacgat tgcgtgttga acatccaggg cgacgagccc gccatgcacc cggagacggt
      541 cgccgccctc gtggggctca tgcgcgacca gccggacctg cccatgggca ccgccgcctg
      601 tcccttcgcc cacgcggacg agctcttcaa ccccaacgcc gtgaaggtgg tggtggacga
      661 tcatcagagg gccctctact tcagccgcag ccccatcccg tatctgcgcc attcctcgat
      721 cttcgaaccg gatttccgcc cctggatgaa gccggagcag ctttcccatt tcaagcgcca
      781 cctcggcctc tatgcctacc ggcccgacac gctccgcgcc ttcacccagc tgccgcccca
      841 ccccctggaa cagctggaga tgctggaaca gctgcgggcc ctggccgcgg gcatccccat
      901 cggcgtggcc gataccccct tcctcagcct gggcgtggat gtccccagcg atgtggcagc
      961 cgccgaggcc ctgctgcggg agcgggggct ggcgcggtag actccctgtc gagggtctcc
     1021 cgcccgccca tcgccaggag aaatcagtga gccaccacaa agtcgtcgtg attggcaccg
     1081 gtcccgcggg ctacaccgcc gccctgtaca cctcgcgcgc gaatctcgcc cccctggtct
     1141 ttgaaggggt ccagcccggc ggccagctga ccatcaccac ggaagtggag aacttccccg
     1201 gcttccgcca gggcatcgcc ggccccgccc tcatggacga gatgcgggaa caggtcctcc
     1261 gcttcggcac caccatcaag gccgagaccg tcctgaaggc ggacttccag gcgcgtccct
     1321 tcaagctcac gaccgacaag ggcgaataca ccgccgatgc cgtgatcatc gccaccggcg
     1381 cgtcggccaa gtggctgggc atcggcaagg acgagcagct ctcccgttcc ggcggcggcg
     1441 tcagcgcctg cgccacctgc gacgggttct tcttccgcgg caaggagatc gccgtggtgg
     1501 gcggcggcga caccgccatc gaggaggccg tcttcctcac caagttcgcc accagggtcc
     1561 acctcatcca ccgccgcgac aagctccgcg cctccaaggc catgcaggac cgcgccctcc
     1621 agaacgagaa gatccagccc ctctggaaca agaccgtgct ggacgtgctc accaccctcc
     1681 atgagacccc catgggcgag aaggtcgaga agatccgggc cctcaagctc aaggacaccg
     1741 tggacggctc cgagtccgag ctgccggtgg agggcctctt cgtggccatc ggccaccagc
     1801 ccaacaccag cctcttcgcg ggccagctgc ccatggacga gaccggctac ctccacgtgg
     1861 agaagggctc cagccgcacc accatccccg gcgtcttcgc ctgcggcgac gtgcaggacc
     1921 acgtctaccg ccaggccatc accgccgcag gcagcggctg catggccgcc atcgatgccg
     1981 agcgctggct ggcggaacag ggtctggccg agtgaaggcg ccccgggcgt gaatgagcag
     2041 cacctcgaac ccctgaagcg gcatcccgag ggccgggccc tccgggcgga agtggatctg
     2101 ggccgcatcg cgcggaacct gggccgcatc cgggccgctg ccggggggcg ggagatctgg
     2161 gcggtggtga aggccaatgc ctacggccac ggggccgtgc ccgtgggccg ggccctggcc
     2221 gccgccggcg cccacgggct ggccgtctcc agcctggaag aaggcctgga gctgcgccag
     2281 gggagcatcg agtgtcccat cctggttctg ggcggcctcc gtcccgaggc cctggccgcc
     2341 gccagcgccg aaaacctcgc catcgccctg gtggggcccg agcacctcga ggactacgcg
     2401 cgcctcctgc cccggcatcc ggtccggctc cacctgaaac tggacacggg ca
//
LOCUS       DASUDT010000140         8162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_426922, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000140 DASUDT010000000
VERSION     DASUDT010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 8162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8162
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426922"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1051)
                     /gene="glyA"
                     /locus_tag="VFV26_02960"
     CDS             complement(<1..1051)
                     /gene="glyA"
                     /locus_tag="VFV26_02960"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX4845151.1"
                     /translation="MYEVIRTSDPAVFQALELEVQRQRHHLELIASENYASRAVMQVM
                     GSHFTNKYAEGYPGKRYYGGCSNVDTIETLARDRAKQIFGAEHANVQPHSGAQANMAV
                     YLAALKPGDTVMGLDLAHGGHLTHGHPLNSSGILYRFKGYHVRREDERVDMDEVRSLA
                     REHRPRMIVAGASAYPRTWDFPAFRAIADEVGALLMVDMAHYAGLVAAGLYPNPVGIA
                     DFVTSTTHKTLRGPRGGIILAAAEHEKALTSSIFPGIQGGPLMHVIAAKAVAFGEALR
                     PEFKAYQQSVLDNAKAMARVLIARGVRIVSGRTESHLVLVDLRAKKVTGKDAEAALGK
                     AHITVNKNAIPNDPEK"
     gene            1171..2622
                     /gene="purB"
                     /locus_tag="VFV26_02965"
     CDS             1171..2622
                     /gene="purB"
                     /locus_tag="VFV26_02965"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX4845152.1"
                     /translation="MPFLPPHDGSELERFEHPLASRYASKAMVRLLSPLYRQRVWRRL
                     WVALAESESELGLPITAAQIAELKATQDAVDLDAIARHEAALRHDVMAAIHAWGEQAP
                     GARPILHLGATSCFVTDNGDLLIAQEALTLLRRRLQDVIAALAGFAARWQDQPTLGFT
                     HFQPAQPTTVGKRATLWIQDLLLDLEDLDHLIRTTPVRGVKGTTGTQASFLELFEGQG
                     AQVEALEQRFCEKVGFPAIPVSGQTATRKLEDRMGQVLCGIAASASKFACDLRLLQHL
                     KEVEEPFESKQIGSSAMPYKRNPMRSERINSLARFVLGLMPSSYQTSASQWMERTLDD
                     SAHRRLTISQGLLAADAILVLFRNVASGLVVYPKMIEARLAQELPFMAAEVLLMEAVK
                     RGGDRQDLHERFRGAALEAGRRIKAEGRPNELLKLLAEDPAWGMTEAELAALLDAARF
                     TGRAGDQVRQFLAGPVAAALQDHAPADEAAVRV"
     gene            2646..3479
                     /locus_tag="VFV26_02970"
     CDS             2646..3479
                     /locus_tag="VFV26_02970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845153.1"
                     /translation="MLKLAVIGAQTLLGRELVSALEARDASVLPLSIGALTVEEEVGD
                     LVVFAPSRLLLEGLDAVILADTPDLDLLEGFPGRILDLRSEPEGRVDPMPLAGPWPQG
                     AKSLRGRPALEQVLALLPSLLEGLGEVGGTHLRSVAWMGDRGLDGLVEQTLAVLNGED
                     PDLAKLGYRQAFEVVPVTPAAGKGRLMEIRVPSFHGDLLILQVRAADGLALAKKAPPA
                     GVKWVEAPPSSRDVAISADLLAHLDLATDGKAAVLTLGFDPVLWGILRPAMRVLGLMQ
                     G"
     gene            3494..4363
                     /locus_tag="VFV26_02975"
     CDS             3494..4363
                     /locus_tag="VFV26_02975"
                     /inference="COORDINATES: protein motif:HMM:NF014324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEX4845154.1"
                     /translation="MRKGIACDMVVFAVLGLAGPGLAAQQAPSPLEERWSVVEGVPGA
                     EVRAYKPSYLLLARTSDQPNLLPGTPTRGAQAVDLRDTEAKFQLSFKFMVASLSEDQR
                     LSIWGAYTQQSHWQVYYPQASRPFRETNYEPELFLAWQPDREVLGLRWRLLTVGINHQ
                     SNGRPEPLSRSWNRLVVQAGFERGDFVLLLRPWFRAHESGAEDDNPDIEDYLGHGEVV
                     AAWCRKGHTLTATGRWNPATGKGAIQGAWSFPLQRRLKGYVQVFSGYGESLVDYNWRQ
                     TTAGIGFCITDWF"
     gene            4364..5011
                     /locus_tag="VFV26_02980"
     CDS             4364..5011
                     /locus_tag="VFV26_02980"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4845155.1"
                     /translation="MTRKLDQPQERGDFFKSLGTLFAGFVADRVEEAVTGLGPKLLRP
                     PGALDELAFLTQCTRCDKCVRACPENAILKAPPTAGLAIKTPYLDPRSIPCFLCTTLP
                     CIAECDDGALVWPERIRADGTILEGPRAVRMGTARVKPGSCVTWGSAEREARECRICV
                     DRCPYPEEAIRIAPPQEDGTVGHPVVDAEVCTGCGLCVFACPAEPAAIIVEPRRG"
     gene            complement(5015..5941)
                     /gene="lipA"
                     /locus_tag="VFV26_02985"
     CDS             complement(5015..5941)
                     /gene="lipA"
                     /locus_tag="VFV26_02985"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX4845156.1"
                     /translation="MARFSKRVGREVLDGHPRLPEWITRERVKLGDLHGMKKDLRDSN
                     LHTVCEEARCPNRTHCFTHGTATFLLMGEVCTRACGFCSIQSGKPRALDSQEPLETAE
                     RVAALGLRFAVLTSVNRDDLPDGGAAHFAETVLAIKRRNPGVGVEVLVPDFLGDLDAV
                     ARVVASGPAVFNHNTETVPSLYPEVRPAGRFERSLRVLAHAKGLGTALYGPSFRTKSG
                     LMLGLGETESELLTTFQALAEARVDILTLGQYLRPTRHQLPVKRYVHPEEFAALGAKA
                     KAFGFQTVYAGPLVRSSFNAHEVSEMDGISIA"
     gene            5984..6889
                     /locus_tag="VFV26_02990"
     CDS             5984..6889
                     /locus_tag="VFV26_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845157.1"
                     /translation="MAKPLSPLLRREQRAFLSRDRAGWAGHLDRARAFLGEGLQEADP
                     SRPVLILGAGAGLEVPWSLAPARTTGWDAEPWSRLRTALRHRRWAPWVFEDLTGGMAD
                     LDAAARRAVAEPWSRRRRDPERAARRLAGLLPSLQPDPEALRAWIGARGPGAILAANV
                     MGQFGAVAERVVESAFGPVVPWEADPERPDPLAEALQAWTRRALEAFLAALAGSGAAL
                     WLIHDRGVVFGDGPLDLGPWTEPWTAQLRSRGELEVSDPLMGLDVGALLGAAGQELRG
                     RDRWLWPLAPGQRHVVEALALRPRA"
     gene            6991..7380
                     /locus_tag="VFV26_02995"
     CDS             6991..7380
                     /locus_tag="VFV26_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4845158.1"
                     /translation="MAAMVLMGLGNVGMKAAGQQGLGSAAVLFWVVIGELPLALAYWL
                     WRGRPGGSAAGVGWALMAGIFTALALVAVNESFSRGAKAAVAVGIMNANFILVALVAF
                     FLFREQLQPSRLVGLAATLSGLWLMAR"
     gene            7398..>8162
                     /locus_tag="VFV26_03000"
     CDS             7398..>8162
                     /locus_tag="VFV26_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX4845159.1"
                     /translation="MPNFRRLLLGRRLASEESHEARISNPVALAVFSSDALSSVTYAT
                     GEIMAALAPYMALATFGPAVIGLSWPVGLGIVALLSILTVSYRQTIFAYPSGGGAYIV
                     AKENLGELPAQVAGASLLVDYVLTVAVSVSAGVTAITSAFPGMDTHRVFLGVAVIAFV
                     GLVNLRGVKESGIVFALPTYGFVVSIFGLIALGFMRYFSGNMQAGEHHALETPTFPGW
                     IAVWVIMKAFAAGCTALTGVEAISNGVSAFKEPTSRN"
BASE COUNT         1093 a         2866 c         2917 g         1286 t
ORIGIN      
        1 gcttctccgg gtcgttgggg atggcgttct tgttcaccgt gatgtgcgcc ttgcccagcg
       61 ccgcctcggc gtccttgccg gtgaccttct tcgcgcgcag gtcgacgagg acgaggtggc
      121 tctcggtgcg ccccgagacg atgcgcacgc cgcgcgcgat cagcacgcgc gccatggcct
      181 tggcgttgtc gagcacgctc tgctggtagg ccttgaactc gggccgcagg gcttcgccga
      241 aggccacggc cttggcggcg atcacgtgca tgaggggccc gccctggatg ccggggaaga
      301 tggacgaggt gagggccttc tcgtgctcgg ccgccgcgag gatgatcccg ccgcgcgggc
      361 cgcgcagcgt cttgtgcgtg gtgctggtca cgaagtcggc gatgcccacc gggttcgggt
      421 agaggcccgc ggccaccagg cccgcgtagt gggccatgtc caccatgagc agggcgccca
      481 cctcgtcggc gatggcgcgg aaggcgggga agtcccaggt gcggggatag gccgaggcgc
      541 ccgcgacgat catgcggggc cggtgctccc gggccaggga ccgcacctcg tccatgtcca
      601 cccgctcgtc ctcccggcgc acgtggtagc ccttgaaccg gtagaggatg cccgagctgt
      661 tcagggggtg gccgtgggtg aggtggccgc cgtgggccag gtccaggccc atgaccgtgt
      721 cgccgggctt gagggccgcc aggtagacgg ccatgttggc ctgggcgccg ctgtggggct
      781 gcacgttggc gtgctcggcc ccgaagatct gcttggcgcg gtcccgggcc agggtctcga
      841 tggtgtcgac gttgctgcag ccgccgtagt agcgcttgcc cgggtagccc tccgcgtact
      901 tgttggtgaa gtgggagccc atgacctgca tgacggcccg ggaggcgtag ttctccgacg
      961 cgatgagctc cagatgatgc cgctggcgct gcacctccag ttccagggcc tggaacacgg
     1021 cggggtcgga ggttcggatc acttcgtaca tggcggcgtt ctccctggtg atgcccctat
     1081 cctagccgcg ctgggcctgg atcacggcag cctcttcgtg agcggaatca caggtccggg
     1141 ctcgtgcgac actggagggc cggagttctt atgcccttcc ttccgcccca cgatggttcc
     1201 gagctggagc gtttcgagca tcccctggcc agccgctacg ccagcaaggc catggtgcgc
     1261 ctgctgtcgc ccctgtaccg gcagcgggtg tggcggcggc tctgggtcgc cctggccgaa
     1321 tcggaatccg aactgggcct gcccatcacg gccgcccaga tcgcggagct gaaggccacc
     1381 caggatgcgg tggacctgga cgccatcgcc cgccacgagg ccgccctgcg ccatgacgtc
     1441 atggccgcca tccacgcctg gggcgaacag gcccccggcg cccggcccat cctccacctg
     1501 ggcgccacca gctgcttcgt gacggacaac ggggacctgc tcatcgccca ggaggccctc
     1561 acactgctgc gccgccgcct ccaggacgtg atcgcggccc tggcgggctt cgccgcccgg
     1621 tggcaggacc agcccaccct gggcttcacc cacttccagc ccgcccagcc caccaccgtg
     1681 ggcaagcgcg ccaccctctg gatccaggac ctgctgctgg acctggagga cctggaccac
     1741 ctcatccgca ccacgcccgt gcgcggcgtg aagggcacca cgggcaccca ggccagcttc
     1801 ctggagctgt tcgaaggcca gggcgcccag gtggaggccc tggagcagcg cttctgcgag
     1861 aaggtgggtt tcccggccat tccggtctcc ggccagaccg ccacccgcaa gctggaggac
     1921 cgcatgggcc aggtgctctg cggcatcgcg gccagcgcct cgaagttcgc ctgcgacctg
     1981 cgcctgctcc agcacctgaa ggaagtcgaa gagcccttcg aatcgaagca gatcgggtcc
     2041 agcgccatgc cttacaagcg caaccccatg cggtccgagc gcatcaacag cctcgcccgc
     2101 ttcgtgctgg gcctcatgcc ctccagctac cagaccagcg ccagccagtg gatggagcgc
     2161 accctggacg acagcgccca ccggcgcctc accatcagcc agggcctgct ggccgcggac
     2221 gccatcctgg tgctgttccg caacgtggcc tcggggctcg tggtctatcc gaagatgatc
     2281 gaggcgcgcc tggcccagga gctgcccttc atggccgccg aagtgctgct catggaggcg
     2341 gtgaagcgcg ggggcgaccg ccaggatctg cacgagcggt tccggggcgc ggcgctggag
     2401 gcgggccgcc gcatcaaggc cgagggccgc cccaacgagc tgctcaagct cctggcggag
     2461 gatccggcct ggggcatgac cgaagcggag ctcgccgccc tgctggatgc cgcccgcttc
     2521 acgggccgcg ccggcgacca ggtgcgccag ttcctggcgg gccccgtggc cgccgccctg
     2581 caggaccacg ctcccgccga cgaagcggcc gtccgcgtct gatctcgacc tcgaaaggtt
     2641 ttcccatgtt gaagcttgcc gtcatcggcg cccagaccct gctgggccgc gaacttgtga
     2701 gcgccctgga ggcgcgggac gcctccgtgc tgcccctgtc catcggggcc ctcaccgtgg
     2761 aggaggaggt gggcgacctg gtggtcttcg cgccgagccg cctcctgctg gaggggctgg
     2821 acgcggtgat cctggcggat acccccgacc tggacctgct ggagggcttc cccggccgca
     2881 tcctggatct ccgctccgag cccgaaggcc gcgtcgatcc catgcccctg gcggggccct
     2941 ggccccaggg cgcgaagtcg ctgcggggcc gcccggccct ggagcaggtg ctggccctcc
     3001 tgccctccct cctggagggc ctgggcgagg tgggcggcac ccacctgcgc tccgtggcct
     3061 ggatggggga ccggggcctg gatggcctcg tggagcagac cctggccgtc ctcaacggcg
     3121 aggatccgga tctggccaag ctggggtacc ggcaggcctt cgaggtggtg ccggtcacgc
     3181 ccgcggcggg caaggggcgg ctcatggaga tccgcgtgcc ctccttccac ggcgacctgc
     3241 tgatcctcca ggtccgcgcc gccgatggcc tggccctggc caagaaggcc ccgcccgcgg
     3301 gggtgaagtg ggtggaggca ccgcccagct cccgggacgt ggccatcagc gccgacctgt
     3361 tggcccatct ggacctcgcc acagacggca aggccgcggt cctgaccctg ggcttcgatc
     3421 ccgtgctgtg gggcatcctc cggcccgcca tgcgggtcct tggcttgatg cagggctgaa
     3481 tcccggagga agcatgcgga agggcatcgc ctgcgacatg gtggttttcg cggtcctggg
     3541 gctggcgggg ccgggcctgg ccgcccagca ggcgccctcg cccctggagg aacgctggtc
     3601 cgtggtggaa ggggtgcctg gagccgaggt ccgggcctac aagcccagct acctgctgct
     3661 ggcccggacg agtgatcagc ccaacctcct gcccgggacc cccacccgcg gtgcccaggc
     3721 tgtggacctg cgggacaccg aggccaagtt ccagctcagc ttcaagttca tggtggccag
     3781 cctgtcggag gaccagcgcc tgtccatctg gggggcctac acccagcaga gccactggca
     3841 ggtctactac ccccaggcct cccggccctt ccgggagacc aactacgaac ccgagctctt
     3901 cctggcctgg cagccggacc gcgaggtgct gggcctgcgc tggcgcctgc tcaccgtggg
     3961 catcaaccat cagtccaacg gtcggcccga gcccctctcc cgcagctgga accgcctggt
     4021 ggtgcaggcg ggcttcgagc ggggggactt cgtcctgctg ctgcggccct ggttccgggc
     4081 ccatgaaagc ggcgccgagg acgacaaccc ggacatcgag gactacctgg gccacggcga
     4141 ggtggtggcg gcctggtgcc ggaagggcca caccctcacg gccacgggcc gctggaaccc
     4201 ggccaccgga aagggggcca tccagggcgc gtggagcttt cccctccagc gccgcctgaa
     4261 gggctacgtg caggtcttca gcggctatgg cgaaagcctg gtggactaca actggcgcca
     4321 gacgacggcg ggcatcggct tctgcatcac ggactggttc tgaatgactc ggaaactcga
     4381 ccaacctcag gagcgcggtg acttcttcaa gtcgctgggg accctgttcg ccggcttcgt
     4441 ggcggaccgg gtggaggagg ccgtcaccgg gctggggccc aagctcctgc ggcccccggg
     4501 cgccctggac gagctggcct tcctcaccca gtgcacccgc tgcgacaagt gcgtgcgggc
     4561 ctgcccggag aacgccatcc tcaaggcgcc gcccaccgcc ggcctcgcca tcaagacgcc
     4621 ctacctggat ccccgcagca tcccctgttt cctctgcacg acactgccct gcatcgcgga
     4681 atgcgacgat ggcgccctgg tgtggccgga acgcatccgg gccgacggca cgatcctcga
     4741 agggccccgg gccgtccgca tgggcaccgc ccgggtgaag cccggctcct gcgtcacctg
     4801 gggcagcgcc gagcgcgagg cccgggagtg ccgcatctgc gtggaccgct gcccctatcc
     4861 cgaagaggcc atccgcatcg cgccgccgca ggaggacggc accgtggggc atccggtggt
     4921 ggatgcggag gtctgcacag gctgcggcct ctgtgtcttc gcctgccccg ccgagcccgc
     4981 ggccatcatc gtggagccgc ggcggggttg agcctcaggc gatgctgatg ccgtccatct
     5041 ctgaaacctc gtgggcgttg aagctggagc gcaccagggg gccggcgtag acggtctgga
     5101 agccgaaggc cttggccttg gcgcccaggg cggcgaactc ttccggatgg acgtagcgct
     5161 tcacgggcag ctggtggcgg gtggggcgca ggtactgacc caaggtgagg atgtccaccc
     5221 tggcttcggc caatgcctgg aatgtggtca atagctcgga ttcggtttca ccgagcccga
     5281 gcatgagtcc actcttggtg cggaaggagg ggccgtacag ggccgttccc aggcccttcg
     5341 cgtgtgccag cacgcgaagg ctgcgctcga agcggcccgc gggccggact tccgggtaga
     5401 ggctggggac ggtctcggtg ttgtggttga acacggcggg gccactggcc accacccggg
     5461 ccacggcgtc gagatcaccc aggaagtccg gcaccagcac ctccacgccc acgccgggat
     5521 tgcggcgctt gatggcgagg acggtctcgg cgaagtgggc ggcgcccccg tccggcaggt
     5581 cgtcgcggtt cacgctggtc agcaccgcga agcgtaatcc gagcgcggcc acgcgctcgg
     5641 ccgtttcaag cggctcttgg gaatccagag cccggggctt gccgctctgg atgctgcaga
     5701 agccgcaggc ccgggtgcag acctcgccca tgagcaggaa ggtggccgtg ccgtgggtga
     5761 agcagtgggt gcggttgggg cagcgggcct cttcgcagac cgtgtgcagg ttcgagtccc
     5821 gcagatcctt cttcatgccg tgcagatcgc ccagcttcac ccgctcccgg gtgatccact
     5881 cgggcagtcg ggggtgccca tcgaggactt cgcggcccac gcgcttcgag aatcgggcca
     5941 tccggcctcc atgcgaagct ccagtttccc gtagcatgcc caaatggcca agccactatc
     6001 ccccctgctg cgccgggagc agcgcgcctt cctctcccgg gaccgcgccg gctgggcggg
     6061 gcacctggac cgggcgcggg ccttcctggg cgaaggcctg caggaggcgg atccgtcgcg
     6121 ccccgtgctg atcctggggg ccggagcggg gctggaggtg ccctggagcc tggccccggc
     6181 gcggaccacc ggctgggatg cggaaccctg gagccggctc cgcacagccc tgcgccaccg
     6241 ccgctgggcc ccctgggtct tcgaggacct gacgggcgga atggcggacc tggatgccgc
     6301 ggcccgccgc gccgtggcgg agccctggtc ccgtcgccgc cgggatccgg aaagggccgc
     6361 ccggcgcctg gcgggcctcc tgccctccct gcagcccgac ccggaggccc tgcgcgcctg
     6421 gatcggggcc aggggcccgg gcgccatcct ggcggccaat gtcatggggc agttcggggc
     6481 ggtggccgag cgggtggtgg aatcggcctt cggcccggtg gtgccctggg aggcggatcc
     6541 ggagcggccg gatcccctgg cggaggcgct ccaggcctgg acccgccggg ccctggaggc
     6601 cttcctggcc gccctggcgg gaagcggcgc cgccctgtgg ctgatccacg accggggcgt
     6661 ggtgttcgga gatggccccc tggacctggg tccctggacc gagccctgga cggcccagct
     6721 gcgcagccgg ggcgagctcg aggtcagcga tcccctgatg ggtctggacg tcggggcgct
     6781 cctgggcgcg gcgggccagg agctccgcgg ccgggaccgc tggctttggc ccctggcccc
     6841 cggtcagcgc cacgtggtcg aggccctggc cctgcggccc cgtgcctagg agcgtgtggc
     6901 gtccgtcaac ccttgtcccc acaggctgcg tccacggcca tactgttttc cccgggggga
     6961 cggatcggca tggcgtggtt tggatgggca gtggcggcga tggtcctcat gggcctgggc
     7021 aatgtgggga tgaaggcggc gggccagcag ggcctgggtt ccgcggccgt gctcttctgg
     7081 gtggtgatcg gcgagctgcc cctggcgctg gcctactggc tgtggcgggg ccgccctggc
     7141 ggttccgctg cgggtgtggg ttgggcgctg atggcgggga tcttcacggc cctggccctg
     7201 gtggctgtga atgaaagttt ctcccggggg gccaaggcgg cagtggccgt cggcatcatg
     7261 aacgccaact tcatcctcgt ggccctggtg gccttttttc tcttccgcga gcagctccag
     7321 ccctccaggc tggtgggcct cgcggccacg ctgtccggcc tctggctgat ggcccgctga
     7381 accagggaca ctgaacgatg cccaatttcc gaagactcct cctgggccgc cgccttgcca
     7441 gcgaggaaag ccacgaagcc cgcatcagca accccgtcgc cctggcggtg ttcagctcgg
     7501 acgccctgtc ctcggtgacc tacgccacgg gcgagatcat ggccgccctg gcgccctaca
     7561 tggccctggc caccttcggc ccggccgtca tcggcctctc ctggccggtg ggcctgggca
     7621 tcgtggccct gctttccatc ctcacggtga gctaccggca gacgatcttc gcctacccca
     7681 gcggcggcgg cgcctacatc gtggccaagg agaacctggg tgagctgccg gcccaggtgg
     7741 cgggcgcctc gctgctggtg gactacgtgc tgacagtggc cgtgagcgtc tccgcgggcg
     7801 tcaccgccat caccagcgcc tttcccggca tggacaccca ccgggtcttc ctcggggtgg
     7861 cggtgatcgc cttcgtgggc ctggtgaacc tccgcggcgt caaggaaagc gggatcgtct
     7921 tcgcgctgcc cacctacggc ttcgtggtca gcatcttcgg cctgatcgcg ctgggattca
     7981 tgcggtattt ctcggggaac atgcaggcgg gggagcatca cgcgctggag acccccacct
     8041 tcccgggctg gatcgccgtg tgggtcatca tgaaggcctt cgcggcgggg tgcacggccc
     8101 tcacgggggt ggaggccatc tcgaacgggg tgtcggcctt caaggaaccc acgtcccgca
     8161 ac
//
LOCUS       DASUDT010000141         4135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_427041, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000141 DASUDT010000000
VERSION     DASUDT010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427041"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1872
                     /locus_tag="VFV26_03005"
     CDS             <1..1872
                     /locus_tag="VFV26_03005"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845160.1"
                     /translation="DELADLGRELNRMVDRLRGTIHALAEQEASERAVLQHAQAAIIV
                     RDTQGLVRRFNPYAEALLGFSEDDVIGYSGSPWLDPEEVGALARTLSERTGRRIQGEV
                     ELIRHLTEAGPDLREWTFVARDGRRVPMLGALSTITAADGQPVGFLAISSDLSSHKAL
                     EADLRASEARAQAASRAKSAFLSSMSHELRTPLNAILGYAQLMNRSGVRSPEDRDQLG
                     RILGAGEHLLSLINDVLSLSKIESGGLELRKGSFRAMALLESVMDMQRIRAASKELEL
                     KLDAAPGFPEHLEGDAAKLRQVLVNLLGNAVKFTARGTVSLLAEYAAGRATFTVADTG
                     PGIAEEDQRQLFQAFYQAANHPMAAEGTGLGLHISRSLVHLMGGELMLWSRLGEGSRF
                     SFSLPLPEGEPPLELEDRGRVMGLEPGQRRATMLVVDDRPENRDLLVRLLESVDFRVY
                     AAADGVEAVELWGRHRPDLVWMDLRMPCMSGFEAIQVIRGRELEEGLPHTFVVAISAS
                     VLDMDRDTLRQSGFDDFLGKPFREGQLFELISRMLGLRFRYREAEGEAPAPKALAELL
                     RLESAAWRGDLKEAVLIGDTQAALALADQMGTKPVAESLRQLLKTYKLQELLDALNG"
     gene            1887..3020
                     /locus_tag="VFV26_03010"
     CDS             1887..3020
                     /locus_tag="VFV26_03010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEX4845161.1"
                     /translation="MLVPQGDILIVDDNPDNLDLLSAVLRQRQYRVRAVPSGAMALEA
                     ARRHPPELVMLDVNMPAMDGYETCEAFKKEAALARIPIIFISALDDPLDKVKAFHVGG
                     RDYVTKPFSAEEVLVRVEHQVSLGRLQRELEIQNQNLLDANLKLKEVNTLKTNFTAML
                     VHDLRSPLTVLGIVLEKLRDGESVRDEMLGKAEDSCTQIKTLLDEMLEIYRSESGQLP
                     MEFGELDPAPWLASLMGPYHLRAGSAGVEFQLAIAEGLPAIRGDRQKLDRALVNLVDN
                     AFKFTPRGGAVRVEAGIEFGTGVEAGLRFLRLSVIDTGRGIPAADLPFIFDPFRQSER
                     SDATRGVGLGLAIVQRLVAAHRGQIRAQSQMGFGSSFSVLLPC"
     gene            3067..>4135
                     /locus_tag="VFV26_03015"
     CDS             3067..>4135
                     /locus_tag="VFV26_03015"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HEX4845162.1"
                     /translation="MRLLPALILGVPLMAQAVSPLQDRADRFLKLVNAGYQALYYVNS
                     EAAWAAATDVKPEHDAAAESAGKAFAAFNGNPLVITEAKELLKHRAQLSDRTVRQLER
                     VLLMPYGAEGPMTQPKLVAERIEAETKQVSLMNGFQFKVGGRPVSANDLDGKLASSRD
                     LAERRMWWEASKEIGIPLKEGLVRLRDLRNGVARELGYPDYFALQVARYGLTPDELKA
                     FNRKFLAELKPLYLQLHTWVKYEMAKKYGQPVPKAIPAHWINNRWSQNWTGFVSAVDF
                     DPYFKGWQPERIVKTAEAFYTGLGFEPLPASFWAKSDLYPVKAGDPRKKNAHASCWHL
                     DLDKDIRSLMSVEANAQWFETV"
BASE COUNT          687 a         1410 c         1427 g          611 t
ORIGIN      
        1 gacgagctgg cagacctggg gcgggagctg aaccgcatgg tggatcgcct gagggggacc
       61 atccatgccc tggcggagca ggaggccagc gaacgcgccg tgcttcagca cgcccaggcg
      121 gccatcatcg tgcgggacac ccagggcctg gtgcgccgct tcaatcccta tgcggaagcc
      181 ctcctgggat tcagcgagga tgacgtgatc gggtattccg gatccccctg gctggatccc
      241 gaagaagtcg gggccctggc caggaccctg tcggagcgca ccggccggag gatccagggc
      301 gaggtcgagc tcatccggca tctgacggag gcggggccgg acctgaggga gtggaccttt
      361 gtggcccggg atgggcggcg ggtgcccatg ctgggggccc tctccaccat cacggcggcg
      421 gacgggcagc ccgtgggctt cctggccatc tcttcggacc tctccagcca caaggccctg
      481 gaggcggacc tgcgcgccag cgaggcccgg gcccaggcgg ccagccgggc caagagcgcc
      541 ttcctctcga gcatgagcca cgagctgcgc accccgctca acgccatcct gggctacgcg
      601 cagctcatga accggagcgg cgtccgcagc cccgaggacc gcgaccagct gggccgcatc
      661 ctgggggccg gcgagcacct gctgtccctg atcaacgacg tgctctccct cagcaagatc
      721 gaatccggcg gcctcgagct gcggaagggg tcgttccggg ccatggcgct gctcgaaagc
      781 gtcatggaca tgcagcgcat ccgggccgcc tccaaggagc tggaactgaa gctggatgcc
      841 gctcccgggt tccccgagca cctggagggc gatgcggcca agctgcggca ggtgctggtg
      901 aacctcctgg ggaacgccgt gaagttcacg gccaggggga cggtgtcgct cctggccgaa
      961 tacgccgcgg gccgcgccac cttcaccgtg gcggacacgg ggccgggcat tgccgaggag
     1021 gaccagcgcc agctcttcca ggccttctac caggcggcca accaccccat ggccgccgag
     1081 ggcaccgggc tcggcctgca catcagccgc tccctggtgc acctcatggg cggggagctg
     1141 atgctgtgga gccggctcgg cgagggcagc cgcttcagct tcagcctgcc gctgcccgag
     1201 ggggagccac cgctggaact ggaggaccgg ggccgggtca tgggcctgga gcccggccag
     1261 cgccgcgcca ccatgctggt ggtggatgac cggccggaga accgggacct gctggtgcgt
     1321 ctgctcgaat ccgtggactt ccgggtctac gccgccgccg acggggtcga ggcggtggag
     1381 ctgtggggaa ggcaccggcc cgacctggtc tggatggatc tccgcatgcc gtgcatgagc
     1441 gggttcgagg ccatccaggt gatccgcggc cgggagctgg aggaggggct gccccatacc
     1501 ttcgtggtgg cgatttccgc cagcgtcctc gacatggacc gggacacgct gcggcagtcc
     1561 ggcttcgacg acttcctggg aaaacccttc cgcgaaggcc agctgtttga actgatctcc
     1621 cggatgctgg ggctgcgctt ccgctaccgg gaggccgagg gggaggcccc cgcgccgaag
     1681 gcgcttgcgg agctcctgcg actggagtcc gccgcctggc gaggcgatct gaaggaggcc
     1741 gtgctgatcg gggacaccca ggccgccctg gcgctggccg atcagatggg aacgaagccc
     1801 gtggcggaga gcctccgcca gctgctcaaa acctacaagc tccaggaact gctcgacgca
     1861 ctgaacggat gaacagggag acggacatgc tggtgcccca gggcgacatc ctcatcgtgg
     1921 acgacaatcc ggacaacctg gatctgctga gcgccgtgct gcgccagcgg cagtatcggg
     1981 tccgggccgt gccgtccggc gccatggccc tggaagccgc ccgccgccat cccccggaac
     2041 tggtgatgct cgacgtgaac atgcccgcca tggacggcta cgagacctgc gaagcgttca
     2101 agaaggaggc cgcgctggcc cgcatcccca tcatcttcat cagcgccctg gatgaccccc
     2161 tggacaaggt gaaggccttc cacgtggggg gccgggacta cgtgaccaag cccttcagcg
     2221 ccgaggaggt gctggtgcgg gtggagcacc aggtgagcct ggggcggctg cagcgggagc
     2281 tggaaatcca gaaccagaac ctgctggacg ccaacctcaa gctgaaggaa gtgaacaccc
     2341 tgaagaccaa cttcacggcc atgctggtcc acgacctgcg ctcgcccctc acggtgctgg
     2401 ggatcgtcct ggagaagctg cgggacggtg agtccgtccg ggacgagatg ctgggcaagg
     2461 ccgaggattc ctgcacccag atcaagactc tgctggacga gatgctggag atctaccgca
     2521 gtgaaagcgg gcagctgccc atggaattcg gcgagctgga tccggccccc tggctggcca
     2581 gcctcatggg gccgtaccac ctgcgggcgg gctccgccgg ggtggagttc cagctggcca
     2641 tcgccgaggg cctgcctgcg atccgggggg accggcagaa gctggaccgg gccctggtga
     2701 atctggtgga caacgccttc aagttcacgc cccggggtgg tgcggtgcgg gtggaggcgg
     2761 gcatcgagtt cgggaccggc gtggaggccg gcctgcgctt cctgaggctg tccgtgatcg
     2821 atacgggccg gggcattccg gcggcggacc tgcccttcat cttcgatccc ttccgccagt
     2881 ccgagcgcag cgacgccacc aggggcgtgg gactgggcct ggccatcgtg cagcgcctgg
     2941 tggccgccca ccggggccag atccgggccc agagccagat gggcttcggc tcgagtttca
     3001 gcgtccttct cccctgctga cggccttccc cccagaaggc acaatagagg gttccccgga
     3061 gcccccatgc gcctccttcc cgccctgatc ctcggtgtcc ctctcatggc ccaggccgtg
     3121 tcccccctcc aggaccgcgc cgaccgcttc ctcaagctgg tgaacgccgg ctaccaggcc
     3181 ctgtactacg tcaattccga agccgcctgg gccgccgcca cggacgtgaa gccggagcac
     3241 gacgccgccg ccgaatccgc cggcaaggcc ttcgccgcct tcaacggcaa ccccctggtg
     3301 atcaccgagg ccaaggagct gctgaagcat cgcgcccagc tcagcgacag gaccgtgcgg
     3361 cagctggagc gggtgctgct catgccctat ggcgccgagg gccccatgac ccagcccaag
     3421 ctggtggccg agcgcatcga ggccgagacg aagcaggtct cgctcatgaa cggcttccag
     3481 ttcaaggtgg gcggccgtcc cgtcagcgcc aacgatctgg atggcaagct cgcttccagc
     3541 cgagacctgg ccgagcgccg gatgtggtgg gaggccagca aggagatcgg cattcccctg
     3601 aaggagggcc tggtgcgcct gcgggacctg cgcaatggcg tggcccggga gctgggctat
     3661 cccgactatt tcgccctcca ggtggcccgc tacggcctga ccccggacga gctgaaggcc
     3721 ttcaaccgga agttcctggc ggaactcaag cccctctacc tccagctcca cacctgggtg
     3781 aagtacgaga tggcgaagaa gtacggccag cccgtgccca aggccatccc cgcccactgg
     3841 atcaacaacc gctggagcca gaactggacg ggcttcgtca gcgccgtgga cttcgatccc
     3901 tacttcaagg gctggcagcc cgagcgcatc gtgaagaccg ccgaggcctt ctacaccggc
     3961 ctggggttcg agccgctgcc cgccagcttc tgggccaagt ccgacctcta tcccgtgaag
     4021 gccggcgacc cccgcaagaa gaacgcccac gcctcctgct ggcacctgga cctggataag
     4081 gacatccgct cgctcatgag tgtggaggcc aacgcccagt ggttcgagac cgtcc
//
LOCUS       DASUDT010000142         5748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1001521, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000142 DASUDT010000000
VERSION     DASUDT010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5748
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001521"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..953
                     /gene="rimO"
                     /locus_tag="VFV26_03020"
     CDS             <1..953
                     /gene="rimO"
                     /locus_tag="VFV26_03020"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEX4845163.1"
                     /translation="SAYLKISEGCDHACAFCVIPQLRGAQRSRSVESVVAEARNLVAQ
                     GVLEISLVGQDTTDYGRDFGDPDALEKLVRALGQVEGLRWFRIHYAYPNRLTDGLLHA
                     MAETPNCARYLDMPLQHADAAILKAMARGGSRAQFLKLIEKVRRLVPGIAIRSNFIVG
                     FPGEDEAAFEELKAFVQEARFDHVGVFTYSPEEGTTAHGLGDPIPKRTKEARKRRLLE
                     LQQKIAREKNQEKVGQVLDVLVEGAHEETDLIVKGRHQGQAPEIDGNVLLVDGAPQVN
                     TIQRVRIVKAHAYDLIGEVEEGGLEASTAAYEAAFRNRMR"
     gene            1057..1725
                     /locus_tag="VFV26_03025"
     CDS             1057..1725
                     /locus_tag="VFV26_03025"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845164.1"
                     /translation="MLELRGLTRAYELGGERAGVFGVSLAVPKGCLAVLAGPSGSGKT
                     TLLQLAGLLDAPDEGAVLLDGQEVSDLPERARCRLRLRRLGFVFQAFNLVPVLSALEN
                     VMLPLQLQGIAEAEARRRAEAALDRVGLADRLHHRPGQLSGGQQQRTAIARALAPDPL
                     LVLADEPTASLDHAHGGPLMDLMAELAQERGTTFLVASHDPAVIARAHHVYRLADGRL
                     VEGP"
     gene            1722..2966
                     /locus_tag="VFV26_03030"
     CDS             1722..2966
                     /locus_tag="VFV26_03030"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX4845165.1"
                     /translation="MILARLALRNLLRQRRRTALTLMVVVAGFLALSLAGGFMAQTFQ
                     GLSDGAIRGGLGHLQVIPPGALDGEEAQSLEKALPDGEALAARLRQDPTVAEVLPRIQ
                     FMGLLSSGPRSVAFLGTAVDPVLEPKHMACLDSLKDGAKAPGGAGSRWLSADPAAREV
                     ILGAGLARSLGASVGSLLTLMSTTRDGALNAVDVEVAGLQDLGLKELNDRFLTVSLAT
                     AGQLLDAGPARSRLSVILKRPQDITRAQARVQAQLPGTTVLPWFELASFYRQVKLLYF
                     AIFGFMGLVLFLVVLLATVNTLLMSVMERVREFGVLRAMGLQPGQLLALLQWEGAFLG
                     LLGSALGLAATLLLRAGLNALHLQMPAPPGTSHGYELNIHLVPGVYLAVALGLQATIQ
                     LSALFPGFKAARLRIVEALRHV"
     gene            2959..3483
                     /locus_tag="VFV26_03035"
     CDS             2959..3483
                     /locus_tag="VFV26_03035"
                     /inference="COORDINATES: protein motif:HMM:NF016489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEX4845166.1"
                     /translation="MYKAPRPAWWLATGFGSGYLRPAPGTWGSLAGLGAWLSLVWALR
                     GSAFAPWVLLVAPLVLTLAAVWAADRVVKESGQKDPSFIVADEWAGLWFALTPLIFTI
                     TIQPQPWTLWAPRLVAPFLLFRLFDIWKPGPVDTAQRLPGGWGVVMDDVLAGLLAALL
                     VWPLDRWLVAHLKI"
     gene            complement(3601..5346)
                     /locus_tag="VFV26_03040"
     CDS             complement(3601..5346)
                     /locus_tag="VFV26_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair helicase XPB"
                     /protein_id="HEX4845167.1"
                     /translation="MIALRPDNPLIVQSDRTLLLEVANPAFEQVRDELARFAELVKSP
                     EHIHTYRITPLSLWNASASGVACADMIGTLNTWSKYPVPQNLLQEIEDHGTRYGKLRL
                     VAKGDRLALEMDDRGLFWELENQKSLQGLLAEPYPDEKGIYLNTGMRGEVKLQLIRLG
                     HPVQDMAGYKPGDPLPFELAPTTKQNGKPFGLRHYQQAAVDVFHAGGGPDGGAGVLVL
                     PCGAGKTVIGIGCMGSLQTHTLVLTTNGTAVKQWKQELLDKTTLTEDQVGLYTGDTKE
                     IKPVTIATYQILTYRKTKTGPFEHFKLFEAANWGLVIYDEVHMLPAPIFRAVAELQAK
                     RRLGLTATLVREDGKEEDVFSLIGPKRVDVPWKMLEKDGFIATAHCLEIRVPLPTDER
                     MEYAVADQRQRFRIASENSLKMAVMDELLAGHPNDNILIIGQYLEQLRIIGERLGAPV
                     LTGQTPERERETLFRQFREGQLRVLIVSKVANFAIDLPDASVAIQVSGTFGSRQEEAQ
                     RLGRILRPKGERNVSYFYSLISRDTTEQEFARNRQLFLTEQGYRYLIESRHFDETGRL
                     SEPAVWKKLREETAG"
     gene            5536..>5748
                     /locus_tag="VFV26_03045"
     CDS             5536..>5748
                     /locus_tag="VFV26_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845168.1"
                     /translation="MGMSLSRVLTPLALVAVCSLEAQAPINPVLHRRSLPARVGPDAL
                     SGHDRADLRRDWDLYWFGGKLSPDYLD"
BASE COUNT          816 a         2010 c         1945 g          977 t
ORIGIN      
        1 ccagcgccta cctgaagatc agcgaaggct gcgatcacgc ctgcgccttc tgcgtgatcc
       61 cccagctgcg gggcgcccag cgcagccgca gcgtcgagag cgtggtggcc gaggcccgca
      121 acctggtggc ccagggcgtg ctggagatca gcctcgtggg ccaggacacc acggactacg
      181 gccgcgactt cggcgatccc gacgccctgg agaagctggt gcgggccctg ggccaggtgg
      241 agggcctgcg ctggttccgc atccactacg cctaccccaa ccgcctcacg gacggtctgc
      301 tgcacgccat ggcggagacg cccaactgcg cccgctacct ggacatgccc ctgcagcatg
      361 cggacgccgc catcctcaag gccatggccc ggggcggcag ccgggcccag ttcctgaagc
      421 tcatcgagaa ggtgcgccgc ctcgtgccgg gcatcgccat ccgctcgaac ttcatcgtgg
      481 gctttcccgg cgaggacgag gcggccttcg aggaactgaa ggccttcgtg caggaggccc
      541 gcttcgatca cgtgggcgtc ttcacctaca gccccgagga gggcaccacc gcccacggcc
      601 tgggcgatcc catccccaag cgcaccaagg aggcccgcaa gcgccgcctg ctggagctgc
      661 agcagaagat cgcccgggag aagaaccagg agaaagtggg ccaggtcctc gacgtgctgg
      721 tggaaggcgc ccacgaggag accgacctca tcgtgaaggg ccgccaccag ggccaggctc
      781 ccgagatcga tggcaacgtg ctgctggtgg acggcgcccc ccaggtgaac accatccagc
      841 gggtgcgcat cgtgaaagcc cacgcctacg acctcatcgg cgaagtggag gagggcggac
      901 tcgaggccag caccgcggcc tacgaagcgg ccttccggaa ccggatgcgc taggagcgcc
      961 gaacaatacc gccacggggc cgcgcgaggg gcgccgtttg taggcactca acctgcgccc
     1021 tgccgttctg aggccgcgga ccgctacact ggtcggatgc tggaactccg gggcctgacc
     1081 cgcgcctacg aactcggcgg cgaacgcgct ggcgtgttcg gcgtgtcgct ggcggtgccg
     1141 aaggggtgcc tggcggtgct ggcaggtccc agcggcagcg gcaagaccac cctgctccag
     1201 ctggcgggcc tgctggatgc gcccgacgaa ggcgcggtcc tcctggatgg acaggaagtg
     1261 tccgatctgc ccgagcgggc acgctgccgc ctccgcctcc ggcgcctggg cttcgtgttc
     1321 caggccttca acttggtgcc cgtgctgtcc gccctggaga acgtgatgct gcccctgcag
     1381 ctccagggca ttgccgaggc tgaagcccgc cgccgcgccg aagccgccct ggaccgggtg
     1441 ggcctcgcgg accgcctgca ccaccggccc ggccagctca gcggcggcca gcagcagcgg
     1501 acggccatcg cccgcgccct ggcgccggac cccctgctgg tgctggcgga cgaacccacg
     1561 gccagcctcg accacgccca cggcggcccc ctcatggacc tcatggccga gctggcccag
     1621 gagcggggca ccaccttcct ggtggccagc cacgaccccg ccgtcatcgc ccgcgcccac
     1681 cacgtctacc ggctggccga cgggcggctg gtggagggcc catgatcctc gcccgcctgg
     1741 ccctccggaa cctgctgcgc cagcggcggc ggacggcgct cacgctgatg gtggtggtgg
     1801 ccgggttcct ggccctcagc ctggccgggg gcttcatggc ccagactttc cagggtctgt
     1861 ccgacggcgc catccggggc ggcctggggc acctccaggt gattcccccc ggagccctgg
     1921 acggcgagga ggcccagagc ctggagaagg ccctgcccga tggcgaagcc ctggcggcgc
     1981 ggctccggca ggaccccacc gtggccgagg tgctgccccg catccagttc atgggcctgc
     2041 tctccagcgg cccccgcagc gtggccttcc tgggcaccgc cgtggatccc gtgctggagc
     2101 cgaagcacat ggcctgtctg gattcgctga aggatggcgc caaggctccc ggcggcgcgg
     2161 gttcccgctg gctttccgca gatcccgccg cccgcgaggt gatcctcggc gcgggtctgg
     2221 cccgcagcct gggcgcctcc gtggggagcc tgctcaccct catgtccacc acccgggacg
     2281 gggccctgaa tgccgtggat gtggaggtgg cgggcctcca ggacctgggc ctcaaggagc
     2341 tcaatgaccg cttcctcacc gtgagcctcg ccaccgcagg ccagctgctg gatgcgggcc
     2401 cggctcgctc ccgcctctcg gtgatcctca agcgtccgca ggacatcact cgcgcccaag
     2461 cgcgagtgca ggctcaactg ccgggaacga ccgtcctgcc ctggttcgag ctggcctcct
     2521 tctaccggca ggtgaagctg ctctacttcg ctatcttcgg cttcatgggc ctggtgctgt
     2581 tcctggtggt gctgctggcc acggtgaata cgctgctcat gtccgtcatg gagcgcgtac
     2641 gcgagttcgg cgtcctgcgg gccatgggcc tccagcccgg ccagctcctg gcgttgctcc
     2701 agtgggaggg cgcgttcctc ggcctcctgg gcagcgccct gggcctggcc gccaccctgc
     2761 tgctccgcgc gggcctcaac gccctgcatc tccagatgcc cgccccgccg ggcaccagcc
     2821 atggctacga actcaacatc cacctcgtgc ccggcgtcta cctcgccgtg gccctgggcc
     2881 ttcaagccac catccagctg agcgccctgt tcccgggatt caaggccgcg cggctgcgca
     2941 tcgtggaggc actgaggcat gtataaggca ccccgtcccg cctggtggct cgccacgggc
     3001 ttcggcagcg gctacctgag gccggccccg ggcacctggg gcagtctggc cgggctggga
     3061 gcgtggctgt cgctggtgtg ggccctgcgc ggaagcgcct tcgccccctg ggtcctgctg
     3121 gtggcacccc tggtgctcac ccttgccgcg gtgtgggccg cggatcgcgt ggtgaaggaa
     3181 tccggccaga aggatccctc cttcatcgtg gccgacgagt gggcgggcct gtggttcgcc
     3241 ctcacccccc tgatcttcac catcacgatc cagccccagc cctggacgct gtgggccccg
     3301 cgcctggtgg cacccttcct gctcttccgc ctcttcgaca tctggaagcc cgggccggtg
     3361 gacaccgccc agcggctgcc cggcggctgg ggcgtggtga tggacgacgt gctggcgggc
     3421 ctcctggccg ccctcctggt ctggcccctg gatcgctggc tggtggctca cctgaagatc
     3481 tgaaggaaaa gatttcaaga agcggaggtt ggcggaggag cggaggaaag cagaggaaaa
     3541 gcccatcttt tctccgctct cctctgcttt tccgcaatcc tccgtttatg gacgcccttt
     3601 tcagcctgcg gtttcttccc gcagcttctt ccacaccgcg ggctcgctga ggcggccggt
     3661 ctcatcgaag tgcctgctct cgatgaggta gcggtagccc tgctcggtga ggaacagctg
     3721 gcggttgcgg gcgaactcct gctccgtggt gtcgcggctg atgaggctgt agaagtagct
     3781 cacgttgcgc tcgcccttgg ggcgcaggat gcggcccagg cgctgggcct cctcctgccg
     3841 cgacccgaag gtgccgctca cctggatggc cacgctggcg tccggcaggt cgatggcgaa
     3901 gttggccacc ttgctcacga tgagcacccg cagctggcct tcgcggaact gccgaaagag
     3961 cgtctcgcgt tcccgctcgg gggtctggcc cgtgagcacg ggggcgccca ggcgctcgcc
     4021 gatgatgcgg agctgctcga gatactggcc gatgatgagg atgttgtcgt tgggatggcc
     4081 cgccagcagc tcatccatca cggccatctt caggctgttc tcggaggcga tgcggaagcg
     4141 ctggcgctgg tcggccaccg cgtactccat gcgctcgtcc gtgggcaggg ggacgcggat
     4201 ctccaggcag tgggcggtag cgatgaagcc gtccttctcc agcatcttcc agggcacgtc
     4261 cacgcgcttg gggccgatga ggctgaagac atcctcctcc ttgccgtcct cccgcacgag
     4321 cgtggccgtg aggcccaggc gccgcttggc ctgcagttcc gccacggccc ggaagatggg
     4381 cgcgggcagc atgtgcacct cgtcgtagat caccagaccc caattggcgg cctcgaagag
     4441 cttgaagtgc tcgaaggggc cggtcttggt cttgcggtag gtgaggatct ggtaggtggc
     4501 gatggtgacg ggcttgatct ccttggtgtc gcccgtatac aggcccacct ggtcttccgt
     4561 gagcgtggtc ttgtcgagca gttcctgctt ccactgcttc acggcggtgc cgttggtggt
     4621 gagcaccagc gtgtgggtct ggaggctgcc catgcagccg atgccgatga cggtcttgcc
     4681 cgccccgcag ggcaggacca gcacaccggc gccgccatcg ggaccgcccc ccgcgtggaa
     4741 cacgtccacc gcggcctgct ggtagtggcg caacccgaag ggcttgccgt tctgcttggt
     4801 ggtgggcgcc agttcgaagg gcagcggatc gccgggcttg tagcccgcca tgtcctgcac
     4861 gggatggccc aggcggatga gctgcagctt cacctcgccg cgcatgcccg tgttcaggta
     4921 gatgcccttc tcgtccgggt agggttccgc cagcaggccc tggagggact tctggttctc
     4981 cagttcccag aagaggcccc ggtcgtccat ctccagggcc agacgatcgc ccttggccac
     5041 caggcgcagc ttgccgtagc gggtgccgtg gtcctcgatc tcctgcagca ggttctgcgg
     5101 cacggggtac ttggaccagg tgttcagggt cccgatcatg tccgcgcagg ccacgcccga
     5161 agccgaggcg ttccacaggc tgaggggcgt gatgcggtag gtgtggatgt gctcggggct
     5221 cttcaccagc tccgcgaagc gggccaattc gtcccgcacc tgctcgaacg ccggattcgc
     5281 cacctcgagc agcagcgtgc ggtcgctctg gacgatcagg ggattatcgg ggcggagggc
     5341 gatcacggcg tcagtgggct caaacctttc agcctagatg cctgttggga tggggtcaat
     5401 gaaggaggta caatccctgc atccgtcagc gtccgttaag gaaacgtcag acggcccgaa
     5461 gcctcctcga ggcgtatagt taaaaatcct ccgatacccc ttcgcctcgc ctggattcat
     5521 attttggagc gccccatggg catgtcgctg tcccgagtcc tcacccctct ggccctggtg
     5581 gcggtctgca gcctggaagc tcaggcaccc atcaatccgg tccttcaccg acggtcgctc
     5641 ccggcccggg tcgggccgga tgccctgagt ggccacgacc gtgccgacct ccgtcgcgat
     5701 tgggaccttt actggttcgg cggcaagctc tcgcctgatt acttggac
//
LOCUS       DASUDT010000143         2617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_228387, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000143 DASUDT010000000
VERSION     DASUDT010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228387"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..1472
                     /locus_tag="VFV26_03050"
     CDS             60..1472
                     /locus_tag="VFV26_03050"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4845169.1"
                     /translation="MNPARALLVDDDPTILDVVGTLLSRHGHEVVGTGSGLRGAQFLR
                     TERFDLAVVDLMLPDLDGLDLAREAVAKPDTVVVVLSGSTSVETALRAMRMGIYDYVP
                     KPFRTEELEHTLLRAIEKSRLNQENKRLREQIQGQAPGPQMVGCSDTWQKLQNLLRRV
                     APSPSTVLITGPSGTGKELAARAIHQWSPRSHGPFVPIHCGAIPETLLEDELFGHVRG
                     AYTDARTDRPGRFQQAEGGTLFLDEIGTMPMSLQVKLLRVIQEREFTPLGSAKTFKSD
                     FRLVAATNEDLGSLVAQKRFREDLFYRLNVIPVQLKPLREHPEDIPVLVAHFLRKFAR
                     ELGLPLKQVEPAALQALEAYDWPGNVRELENAVERAMALGSDPERLLHQDLPASMAGL
                     LPSPAFPRLPPNQDMGRFLEDLERHLVLEALQATSWNKSESARRLGMRRTTLLHRLKA
                     LGIPLDPAGMEPVLVEAPDA"
     gene            1465..2133
                     /locus_tag="VFV26_03055"
     CDS             1465..2133
                     /locus_tag="VFV26_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845170.1"
                     /translation="MRDPKGAILALLLACGSLNAWSPRVHEAQTAKAVRLLPRNLAAL
                     LRAHPQALLEGARGVANDQPPTVEQVEAQFRTILRLSEEYRRPEDIVRDLGVLAHMVQ
                     LLTDPSATDGLSPLRESFEAYADENMAHLLVTQEPYWAAAGSLDPGPALRRFLSTKLE
                     RHRRLRDHFSEETGRRIGPWDDLSIPFAQLQLAFSNGVHATANLWILAWRAAGDQWEI
                     PSQS"
     gene            2220..>2617
                     /locus_tag="VFV26_03060"
     CDS             2220..>2617
                     /locus_tag="VFV26_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845171.1"
                     /translation="MGTYTRLGSYLLASELASDPLGAVHRAVVITGSNFDRHVLVRTF
                     SEEMFQAGMNTRLAEAGRVVPLLGGARIFGLGYRLESGKTPHVAWDYVPGRSLAQLIE
                     KARQEQIPFGVDHALTVIQGVAQGIVQMQA"
BASE COUNT          400 a          918 c          878 g          421 t
ORIGIN      
        1 agtctacccg ggctgtccaa accttgacag ggggcctccg gttggggact ctgacaggta
       61 tgaatcccgc ccgggccctg ctggtggacg acgatcccac catccttgat gtggtgggta
      121 ccctgctgtc ccggcacggg catgaggtgg tgggcacggg atccggcctc cggggcgccc
      181 agttcctgcg cacggagcgc ttcgacctgg cggtggtgga cctcatgctg ccggatctgg
      241 atggtctgga tctggcccgg gaggcggtgg ccaagcccga cacggtggtg gtggtgctgt
      301 cggggtccac ctcggtggag acggcgctgc gggccatgcg catgggcatc tacgactacg
      361 tgcccaagcc cttccgtacg gaggagcttg agcacacgct gctgcgggcc atcgagaaat
      421 cgaggctgaa ccaggagaac aagcggctcc gggagcagat ccagggccag gcgccggggc
      481 cgcagatggt gggctgctcg gatacgtggc agaagcttca gaacctcctg cgccgggtgg
      541 ccccctcgcc gtccacggtg ctgatcaccg ggccctctgg cacgggcaag gaactggcgg
      601 cccgcgccat ccaccagtgg agcccccggt cccatgggcc cttcgtgccc atccactgcg
      661 gcgccatccc ggagacgctg ctggaggacg agctcttcgg ccacgtgcgc ggcgcctaca
      721 cggatgcccg cacggaccgc ccggggcgct tccagcaggc ggagggcggc accctgttcc
      781 tggacgagat cggcaccatg cccatgagcc tgcaggtgaa gctgctgcgg gtgatccagg
      841 agcgggagtt cacgccgctg ggatccgcga agaccttcaa gtcggacttc cgcctggtgg
      901 ccgccaccaa tgaggacctg ggcagcctcg tggcgcagaa gcggttccgc gaggacctgt
      961 tctaccgcct gaacgtgatt cccgtgcaac tcaagccgct gcgggaacac ccggaggaca
     1021 tcccggtgct ggtggcccac ttcctccgca agttcgcccg ggagctgggc cttcccctca
     1081 agcaggtgga gcccgcggcc ctccaggccc tggaggccta cgactggccc ggcaatgtgc
     1141 gggagctgga gaatgcggtg gagcgggcca tggccctggg ctcggatccc gagcgactgc
     1201 tgcatcagga tctgccggcc tcgatggccg gccttctgcc ctcgccggct ttcccgaggc
     1261 tgccccccaa ccaggacatg ggccgcttcc tggaggatct ggagcgccac ctggtgctgg
     1321 aggccctcca ggccacgagc tggaacaaga gcgaatccgc ccggcgtctc ggcatgcgcc
     1381 gcaccaccct gctgcaccgc ctgaaagccc tgggcatccc cctggatccg gccggaatgg
     1441 aacccgtcct cgtggaggct cccgatgcgt gatccgaaag gcgccatcct ggccctgctg
     1501 ctggcctgtg gctccctgaa cgcctggtcc ccccgggtcc atgaagccca gaccgccaag
     1561 gccgttcgcc tgctgccccg gaacctggcc gccctgctgc gggcccatcc ccaggcgctg
     1621 ttggaaggcg cccggggcgt ggccaacgac cagccgccca cggtggagca ggtggaggcc
     1681 cagttccgca ccatcctccg cctcagcgag gaataccgcc gccctgagga catcgtccgc
     1741 gacctgggcg tgctggccca catggtccag ctgctgacgg acccctccgc cacggatggg
     1801 ttgagtcccc tccgggagag cttcgaggct tacgccgacg agaacatggc ccacctgctg
     1861 gtgacgcagg agccctactg ggccgccgcc ggcagcctgg atccgggacc ggcgctccgg
     1921 cgtttcctgt ccaccaagct ggaacggcac cggcggctcc gggaccattt cagcgaggag
     1981 acgggccgcc gcatcggtcc ctgggatgac ttgtccattc ccttcgccca gcttcaactg
     2041 gctttttcca acggcgtcca tgccacggcc aacctttgga tcctggcctg gcgggcagcc
     2101 ggggatcagt gggagattcc ttcccagtcc tgaggcgcga cgccagatcc atctcccggg
     2161 atgggctagg cgaatcgcgg gtttcgggct atcgttccaa ccatccctct ggagaagtca
     2221 tgggcactta cacccgcctc gggtcctacc tcctggcctc tgaactggcc agtgatcctc
     2281 tcggcgcggt ccaccgggcc gtggtcatca ccggcagcaa cttcgaccgc cacgtgctgg
     2341 tgcggacctt ctcggaagag atgttccagg caggcatgaa cacgcgcctg gccgaggccg
     2401 ggcgcgtggt gcccctgctg ggcggcgccc gcatcttcgg gctgggctac cgtctcgaga
     2461 gcggcaagac gcctcacgtg gcctgggact acgtgcccgg ccggagcctc gcccagctca
     2521 tcgagaaggc tcggcaggag cagatcccct tcggtgtgga tcacgccctg accgtcatcc
     2581 agggcgtggc ccagggcatc gtccagatgc aggccaa
//
LOCUS       DASUDT010000144         5070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_206404, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000144 DASUDT010000000
VERSION     DASUDT010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5070
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206404"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VFV26_03065"
     CDS             complement(<1..888)
                     /locus_tag="VFV26_03065"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX4845172.1"
                     /translation="MPDALPPPSDHPLLRNLNAPQREAVCHAHGPLLILAGAGSGKTT
                     VITRRIAWLIEEEGAHPGSILAMTFTNKAAEEMRERVQRLVSVPAAQMWVSTFHSFCT
                     RILRREGERTPVGRDFVIFDPSDQKSLMKQVLAELKLPEKQYHPKRVLEMISDFKNRC
                     LLPEEAREEALDPWTRKVLDAYDLYQKGLKNHRACDFDDLLLWTERLFRDPVIQAQYG
                     ERFKFILVDEYQDTNRAQYLLVQHLARRHHNLCVVGDEDQSIYGWRGADIRNILDFQQ
                     DFPEAVRIELLQNYRSTRKI"
     gene            complement(898..1275)
                     /locus_tag="VFV26_03070"
     CDS             complement(898..1275)
                     /locus_tag="VFV26_03070"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4845173.1"
                     /translation="MRLLSFLPALLAAGALGAQGAPVKTVDDLRAFFAQNCVKCHGAD
                     GSALGPEGKKLGGRDFTDAKRMAADQDAGLVKTIRKGIFFGMVMPSFKGQLSEEEAGL
                     LVREVLRKAEKGKAIVPEGRAAR"
     gene            complement(1343..1672)
                     /locus_tag="VFV26_03075"
     CDS             complement(1343..1672)
                     /locus_tag="VFV26_03075"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4845174.1"
                     /translation="MGIRSAALLLVFLPATLSAQVRDLRAFYRERCAACHGAEGTGRG
                     PTGARLGGRNLADARWLARQDDAALVASLLKGRGAMPGFARQLAEPEAKRLVAEVLRP
                     MAVKKKT"
     gene            1721..1806
                     /locus_tag="VFV26_03080"
     tRNA            1721..1806
                     /locus_tag="VFV26_03080"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1754..1756,aa:Leu,seq:taa)
     gene            complement(1823..2359)
                     /locus_tag="VFV26_03085"
     CDS             complement(1823..2359)
                     /locus_tag="VFV26_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845175.1"
                     /translation="MTFTADVIATTLHAPLANVEKHWPLVVEALASLKILDPATEAAA
                     IATIGTESYLFAPEREQGSEAYFRRMYEFKRALGNAEPGDGARYCGRGFIPVLGRAEY
                     ARFGKLVGADLVEDPERALDPAVAARILAYDFMLKGVPKAAAEGDWVKVHRLVRGDLA
                     GWKRFNGILIPLLRLLPG"
     gene            2446..3318
                     /locus_tag="VFV26_03090"
     CDS             2446..3318
                     /locus_tag="VFV26_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HEX4845176.1"
                     /translation="MDIHRLRTDRAEAAIAATGGELQALRLGGRDLLWDAGPLWPRHA
                     PLLFPIVGHLKDDTLRCGGAAFPMPRHGFARDRTFTLLEGTATTCTAELRDDDATRAI
                     YPFPFRLRVAYTLGAASLRMDIALRNPGEGPLPASLGLHPAFRWPLDPGLPKAAHRLV
                     FEADEPGPLRRLTAGGLLDPAPHPSPIQGRTLPLQEGLFDDDALIFLEPRSRSLRFEA
                     QGGPALTLRWEGFPHLGLWAKRGPGPAFLCIEPWEGHADPADWTGEFSEKPGSFLLPP
                     GATRRWSLTITVER"
     gene            complement(3323..4627)
                     /gene="miaB"
                     /locus_tag="VFV26_03095"
     CDS             complement(3323..4627)
                     /gene="miaB"
                     /locus_tag="VFV26_03095"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX4845177.1"
                     /translation="MKFHIQTWGCQMNDHDGEKLSGLLSAEGFESVDDAGDAELILLN
                     TCSIREKAVHKVYSELGRLREEKQRRPLLVGVTGCLAQQEQAALFKRAPHIDFVLGTM
                     ALKQLPRLVAEAQAGKARVMDTGEYPDNHLFPPSVTRRRDTAKALVTITEGCNHACTY
                     CIVPTTRGAERHRPYADVLAEVRGLVARGYREVELLGQNVNSYAGGCTFADLLERVSE
                     VDGLEWIRFTTSHPMNFTKDLARVLVTNPKVVPFLHLPLQSGSDRVLKRMLREYTVAE
                     YLERLGYLGEGRAKMTLSTDFIVGFPGETDEDFEDTLRVLDDVAFDGSFSFVYSPRPG
                     TPSLRLKDDLPQTVKSERLARLQRRQVELTRASNERFVGRQIPVRVEDRGPNEHGWWL
                     AHSAEWKTVHLVTGPGRELPFGELVQARITLASPHFLGAELV"
     gene            complement(4779..>5070)
                     /locus_tag="VFV26_03100"
     CDS             complement(4779..>5070)
                     /locus_tag="VFV26_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845178.1"
                     /translation="LWRSGLRYSHLVKVSGDNVLAPDAIRGDRELPHAVSLDLSLAWR
                     VRVGRLDLRAAVDVLNATNHQPMIWVNNVGAAFTPGNFQQPRVFQFSLRAAF"
BASE COUNT          786 a         1807 c         1667 g          810 t
ORIGIN      
        1 gatcttcctg gtggaccggt agttctgcag cagctcgatg cgcacggcct ccgggaagtc
       61 ctgctggaag tcgaggatgt tgcggatgtc ggcgcctcgc cagccgtaga tggactggtc
      121 ctcatccccc accacgcaca ggttgtggtg ccgccgggcc aggtgctgca ccagcaggta
      181 ctgggcgcgg ttggtgtcct ggtactcgtc cacgaggatg aacttgaagc gctcgccgta
      241 ctgggcctgg atcacgggat cgcggaagag ccgctcggtc cagagcagca ggtcgtcgaa
      301 gtcgcaggcg cggtggttct tcaggccctt ctggtagagg tcgtaggcat ccagcacctt
      361 gcgggtccag gggtccaggg cctcctcccg ggcctcctcc ggcagcaggc agcggttctt
      421 gaaatcgctg atcatctcca gcacccgctt ggggtggtac tgcttctccg gcagcttcag
      481 ctcggccagc acctgcttca tgaggctctt ctggtccgac ggatcgaaga tgacgaaatc
      541 ccggcccacg ggcgtgcgct cgccctcgcg gcggaggatg cgcgtgcaga agctgtggaa
      601 ggtgctcacc cacatctgcg cggcgggcac ggagaccagg cgctggacgc gctcccgcat
      661 ctcctccgcg gccttgttcg tgaaggtcat ggccaggatg gagcccgggt gggcgccttc
      721 ctcctcgatg agccaggcga tgcggcgggt gatcaccgtg gtcttgcccg agccggcgcc
      781 cgccaggatc agcagcggcc cgtgggcgtg gcacaccgcc tcccgctggg gggcgttcag
      841 gttgcggagc agcgggtggt cggaaggagg cgggagcgca tcgggcatcc cctcatccta
      901 tcgggccgcc ctgccctccg ggacgatggc cttgcccttc tcggcctttc gcaggacctc
      961 ccggaccagc aggccggcct cctcctccga cagctggccc ttgaaagagg gcatgaccat
     1021 cccgaagaag atgcctttgc ggatggtctt gaccaggccg gcatcctggt ccgcggccat
     1081 cctcttggca tccgtgaaat cgcggccgcc cagcttcttc ccctcgggac ccagggccga
     1141 accatcggcc ccgtggcact tcacgcagtt ctgggcgaag aaggccctca ggtcgtccac
     1201 ggtcttcacc ggggccccct gcgcccccag ggcgccagcg gccagaagag cagggaggaa
     1261 tgacagcaac cgcatgacca cctcgatgaa tgttgaaaca cctggacagg atgagcccgg
     1321 ccggtttccg ggcaaggctc cctcaggttt ttttcttcac cgccatgggc cgcagcacct
     1381 cggccaccag gcgcttcgcc tccggctccg caagctgccg ggcgaagccc ggcatggcgc
     1441 cgcggccctt gaggagcgag gccaccagtg ccgcgtcatc ctgacgggcc agccaccggg
     1501 cgtccgcgag gttccggccc cccagccggg cgccggtggg tccgcggccc gtgccttcgg
     1561 ccccgtggca ggccgcgcaa cgctcgcggt agaacgcccg caaatcccgc acctgggcgg
     1621 acagggtggc cggcaggaac accagcagca gcgcggcgga acggatcccc ataggttcga
     1681 cgctaccacg ggcgggaaac cgccgttagg ctggaaccac gcgcccgtgg cggaatggca
     1741 gacgccgcgg acttaaaatc cgcttccggc aacggagtac cagttcgagt ctggtcgggc
     1801 gcaccaatgc caaggtccgc ccctacccgg gcagcagcct cagcagcgga atcaggatcc
     1861 cgttgaaccg cttccagccc gcgagatcgc ctcgcaccag ccggtggacc ttcacccagt
     1921 cgccctcggc ggcggccttc ggtacgccct tgagcatgaa gtcgtaggcc aggatcctcg
     1981 ccgccacggc tggatccagg gcccgctcgg ggtcctccac gagatcggcg cccacgagtt
     2041 ttccgaaccg ggcgtactcc gcccggccca gcaccgggat gaagccccgg ccgcaatacc
     2101 gcgcgccatc gccgggctcc gcgttgccca gggcccgctt gaactcgtac atgcggcgga
     2161 aataggcctc gctgccctgt tcgcgctcgg gcgcaaagag gtagctctcc gtcccgatgg
     2221 tggcgatggc cgcagcctcg gtggccgggt ccaggatctt caggctggcc agggcctcca
     2281 ccaccagcgg ccagtgcttc tccacattcg ccaggggcgc gtggagggtc gtcgcgatga
     2341 cgtccgccgt gaatgtcatg gctggctccc ggaggaatgc aggcaggcta ggcgggcaat
     2401 ctaccacgta aggacgccca gcaaaactcg acgataatcc cggccatgga catccatcgc
     2461 ctgagaacag acagggcaga ggccgccatc gcggccacgg ggggggagtt gcaggccctc
     2521 cgcctgggcg ggcgggatct gctctgggat gcgggccccc tctggccccg gcacgccccc
     2581 ctgctcttcc ccatcgtggg ccacctgaag gacgacaccc tgcggtgcgg cggcgcggcc
     2641 ttccccatgc cccggcacgg cttcgcccgg gaccggacct tcaccctcct cgaaggaacc
     2701 gccaccacct gcacggcgga actgcgcgac gacgacgcca cccgcgccat ctacccgttc
     2761 cccttccggc tgcgggtggc ctacaccctc ggagcggcct ccctgcgcat ggacatcgcc
     2821 ctccgcaacc cgggcgaggg ccccctgccc gccagcctgg ggctccaccc cgccttccgc
     2881 tggcccctcg atccaggcct tccgaaagcc gcccatcgcc tggtcttcga ggccgatgag
     2941 ccgggccccc tccggcgcct cacggccgga ggactgctgg atccggcccc gcatccctcg
     3001 cccatccagg gccggacgct gcccctgcag gaaggtctct tcgatgacga tgcgctgatc
     3061 ttcctggagc cccggagccg gagcctccgc ttcgaggccc agggtggacc ggccctcacc
     3121 ctgcgctggg agggcttccc ccacctgggc ctttgggcca agcggggtcc cggcccggcc
     3181 ttcctctgca tcgagccctg ggaaggccac gccgatccgg cggactggac aggcgagttc
     3241 agcgagaaac ccgggagctt cctcctgccc ccaggcgcca cgcgccgctg gtcgctcacc
     3301 atcaccgtcg agcgctgaaa acctagacca gctccgcccc caggaagtgc gggctggcca
     3361 gggtgatccg cgcctgcacc agctcgccga agggcagctc acggccgggg cccgtcacca
     3421 ggtgcacggt cttccattcg gcactgtggg ccagccacca gccatgctcg ttggggccgc
     3481 ggtcctccac gcgcacgggg atctggcggc ccacgaagcg ctcgttgctg gcgcgggtca
     3541 gctcgacctg gcgccgctgg aggcgcgcca ggcgctcgga tttgacggtc tggggcaggt
     3601 catccttgag gcgcagggaa ggcgtcccgg gccgcggcga gtagacgaag ctgaaggaac
     3661 cgtcgaaagc cacgtcatcc agcacccgca gggtgtcctc gaagtcctcg tcggtctcgc
     3721 cggggaagcc cacgatgaaa tccgtgctga gggtcatctt cgcgcggccc tcccccaggt
     3781 agcccaggcg ctccaggtac tcggccacgg tgtactcgcg cagcatgcgc ttcagcaccc
     3841 ggtcgctgcc gctttgcagg ggcaggtgga ggaagggcac caccttgggg ttcgtcacca
     3901 gcacccgggc cagatccttc gtgaagttca tggggtggct ggtggtgaag cggatccact
     3961 ccaggccgtc gacctcggac acccgctcca gcagatccgc gaaggtgcag ccgccggcat
     4021 agctgttcac gttctggccc agcagctcca cctcgcggta gccccgggcc accaggcccc
     4081 gcacctcggc cagcacatcg gcgtacggcc ggtggcgctc cgcgccccgg gtggtgggca
     4141 cgatgcagta ggtgcaggcg tggttgcagc cttccgtgat cgtcaccagg gccttggcgg
     4201 tgtcgcggcg ccgcgtgacg gagggcggga acaggtggtt gtccgggtac tcgccggtgt
     4261 ccatcacccg ggccttgccc gcctgggcct ccgccaccag ccgcggcagc tgcttcaggg
     4321 ccatggtgcc cagcacgaaa tcgatgtggg gcgcccgctt gaagagcgcc gcctgctcct
     4381 gctgggccag gcagcccgtg acgcccacca gcagggggcg ccgctgcttc tcctcgcgca
     4441 ggcggcccag ctccgaatag accttgtgca cggccttttc gcggatggag caggtgttca
     4501 gcaggatcag ctccgcgtcc cccgcatcgt ccacgctttc gaagccttcg gccgacagca
     4561 gccccgacag cttctcgccg tcgtggtcgt tcatctggca gccccaggtc tggatgtgga
     4621 acttcatcgg ttcatccaaa cctacgagtg taccgaaaaa tgcctagaca ggattaacag
     4681 gattaagtgc ttgattaaca ggatgaaaac cgaaaaggat ttgcttctga agtcctgtcg
     4741 atccttcctt caatcctgtt catcctggcc catttttctc agaatgccgc ccgcaggctg
     4801 aactggaaga cccgcggctg ctggaagttg ccgggggtga aggcggcgcc cacgttgttc
     4861 acccagatca tgggctggtg gttcgtggcg ttgagcacat ccaccgccgc gcggaggtcc
     4921 agccggccca cgcgcacgcg ccaggccagg ctgaggtcca ggctgacggc atggggcagt
     4981 tcccggtcgc cgcggatggc gtctggagcc agcacgttgt cgccggacac cttcaccagg
     5041 tggctgtacc gcaggcctga acgccagagg
//
LOCUS       DASUDT010000145         3701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2172478, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000145 DASUDT010000000
VERSION     DASUDT010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3701
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2172478"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFV26_03105"
     CDS             <1..248
                     /locus_tag="VFV26_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845179.1"
                     /translation="HGDEAGGAFLDPGGKPLVSLQAHSGRDLSTAPGLERCEVDLSPA
                     PSAHLRQALLAAFGWYLILFDHLKEREAVAAETALRM"
     gene            349..603
                     /locus_tag="VFV26_03110"
     CDS             349..603
                     /locus_tag="VFV26_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014393940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4845180.1"
                     /translation="MLHLIWTGLIGLIAGAVAKAILPGKDPGGWIITMALGIAGSFLG
                     TWLGRAVGFYQEGASAGFIMSVVGALILLGAYHLYKRAAA"
     gene            603..1541
                     /locus_tag="VFV26_03115"
     CDS             603..1541
                     /locus_tag="VFV26_03115"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEX4845181.1"
                     /translation="MGPAQTLAAILGLSTVSGVNLYLTVLLVGAGQRFGWIHGLPPDL
                     AILGHPVVLAVAGLLFLVEFLADKVPFITPIWDGLHTFIRPLGGALLALGAAGDLHPV
                     AKTLALLAGGTIALGTHGSKMGVRLLAHTSPEPAGHSALSVAEDVGVIGLLALVYTHP
                     AVALPVLGAILLATALLLPMLARALVFVLTGLRGALRSLVGRGGRDEIPAWVELKLLE
                     QAPSDPGEVLPCFARRVKGLPRFHRAFLARADGGWHLIHRRWFRTRILALDAGPGPVR
                     TFPGFLWDSAVFLRDGKPQILLVGRDWRHALPKPEA"
     gene            complement(1569..>3701)
                     /locus_tag="VFV26_03120"
     CDS             complement(1569..>3701)
                     /locus_tag="VFV26_03120"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX4845182.1"
                     /translation="GEYALKVQAQDGKGEVRSFALKGAGFYDNLKWSPDGKKIAYTDN
                     ALALRILDLATGAVKAVSSEVLYTPGPTLNHNWSPDSRFLAYTRNTESGMLRIHVYAL
                     EEDKSTPLTDGLADACEPVFDRSGKYLYFTASTEAGPVRDWFAQSNADALMRGDLYLM
                     VLAKDTPSPLAKESDEEAGAPKADEKKDGKAEVKVHIDFEGLAERIVPIEAAKSAFFA
                     DLEAGEAGTLFYRRQAGGANRFNRGEAMALCRFDLKKREETVLVDKSDGYSLSADGKK
                     ALTRLREAVTIIPTIGKPEAGKGKVALEGLQVKVEPRQEWAQILDEVWRINRDYFYAP
                     NMHGADWKAMKAKYAALLPDLATRSDLNRVIQWMCSELAVGHHRGGGGDLPDTGKAIP
                     GGLLGADLEVAGGRYRFAKIFGGLNWSPELRSPLTEPGVNVRPGEYLLAVNGRDLKAP
                     ENLFARFENTAGKLVELTVGSDPAGKDARTVSVVPVASEAGLRNRDWVEGNLKKVHDA
                     TEGRVAYVYVPNTTSLGHTYFKRYFYPQAQKDAVIIDERYNGGGQVADYYIDLLRRPF
                     IAMWAMRYGQDLKTPQASIQGPKVMLVDETAGSGGDLLPWMFRKFGLGPLVGRPTWGG
                     LVGILGFPELMDGGNITAPNLAIWTDKGWVVENEGVAPDIEVEQLPKDILAGRDPQLE
                     KAIDLMKAELKKNPPQKMVRPPYPVRTK"
BASE COUNT          458 a         1331 c         1276 g          636 t
ORIGIN      
        1 gtcacgggga cgaggccggc ggggccttcc tcgatccggg cggcaagccc ctggtcagcc
       61 tccaggccca ctccgggagg gacctctcca ccgcccccgg gctggaacgc tgtgaggtgg
      121 acctgagccc ggccccctcc gcccacctgc ggcaggccct gctcgcggct ttcggctggt
      181 acctgatcct gttcgaccac ctgaaggagc gggaggccgt ggcggcggaa acggccctgc
      241 ggatgtgagc ccgggaccgg gaggcctcca gctctcccgc atccgttgac ccgcccctgg
      301 ttgggacgta gggtgggacc gcatcccacg ttccaatcag gaggtcccat gttgcacctc
      361 atctggaccg gcctcatcgg ccttatcgcc ggcgcggtgg cgaaggccat cctgcccggc
      421 aaggatcccg gaggctggat catcaccatg gccctcggca tcgcgggctc cttcctgggc
      481 acctggctcg gccgcgccgt gggcttctac caggaggggg ccagcgccgg cttcatcatg
      541 tccgtggtgg gcgcgctgat cctgctcggc gcctaccacc tctacaagcg ggccgcggcc
      601 tgatgggccc ggcccaaacc ctggcggcca tcctcggcct gtccaccgtc tccggcgtca
      661 acctctacct cacggtgctg ctggtgggcg cggggcagcg gttcggctgg atccacggcc
      721 tgcctccgga cctggccatc ctgggccacc ccgtggtgct ggccgtggcc gggcttctct
      781 tcctggtgga gttcctggcc gacaaggtgc ccttcatcac ccccatctgg gatggcctcc
      841 acaccttcat ccggcccctg ggcggcgccc tcctggccct gggggccgca ggcgacctgc
      901 atcccgtggc caagacgctg gccctgctgg cgggcggcac catcgccctg ggcacccacg
      961 gcagcaagat gggcgtgcgg ctcctggccc acacctctcc tgagcccgcg ggccacagcg
     1021 ccctcagcgt ggccgaggat gtgggggtga tcggcctcct ggccctggtc tacacccatc
     1081 cggccgtggc cctgccggtg ctgggggcga tcctgctggc cacggccctc ctcctgccca
     1141 tgctcgcgcg ggccctggtc ttcgtgctca cgggcctccg cggagccctc cgctccctgg
     1201 tgggacgggg gggccgcgac gagatcccgg cctgggtgga actgaaactg ctggagcagg
     1261 ccccgtcgga tcccggggag gtcctgccct gcttcgcccg ccgggtgaag ggcctgccgc
     1321 gattccaccg ggccttcctg gcccgggcgg acgggggctg gcacctgatc caccggcgct
     1381 ggttccggac ccggatcctc gccctcgacg cgggccccgg tccagtccgc accttccccg
     1441 ggttcctgtg ggattccgcc gtgttcctcc gggacggcaa gccccagatc ctcctcgtgg
     1501 gccgggactg gcgccacgcc ctgccgaagc cggaggcctg agcctccggc tccgggtcga
     1561 ccgggcgcct acttcgtccg caccggatag ggcgggcgga ccatcttctg gggcgggttc
     1621 ttcttcagtt ccgccttcat gaggtcgatg gccttctcca gctggggatc gcggcccgcg
     1681 aggatgtcct tgggcagctg ctccacctcg atgtccgggg ccacgccctc gttctccacc
     1741 acccagccct tgtcggtcca gatggccagg ttgggggccg tgatgttccc gccgtccatg
     1801 agctcgggga agcccaggat gcccacgagg ccgccccagg tgggccggcc cacgagggga
     1861 cccaggccga acttgcggaa catccagggc agcaggtcgc cgccggaacc ggcggtctcg
     1921 tccaccagca tgaccttggg cccctggatg gaggcctggg gcgtcttcag gtcctggccg
     1981 tagcgcatgg cccacatggc gatgaagggc cggcgcagca ggtcgatgta gtaatccgcc
     2041 acctggccgc cgccgttgta gcgctcgtcg atgatcacgg cgtccttctg ggcctggggg
     2101 tagaagtagc gcttgaagta ggtgtggccc aggctggtgg tgttgggcac gtagacgtag
     2161 gccacgcggc cctccgtggc gtcgtgcacc ttcttaaggt tgccctccac ccagtcgcgg
     2221 ttgcgcaggc ccgcctcgct cgccacgggc accacggaga ccgtgcgggc atccttgccg
     2281 gcggggtcgc tgcccacggt cagttccacc agcttcccgg cggtgttctc gaagcgggcg
     2341 aagaggttct ccggcgcctt caggtcccgg ccgttcaccg ccagcaggta ctcgccgggc
     2401 ctcacgttca cgccgggctc cgtgaggggc gaccgcagct ccgggctcca gttcaggccg
     2461 ccgaagatct tcgcgaagcg gtagcggccg cccgccacct ccaggtccgc ccccagcagg
     2521 ccgccgggga tggccttgcc cgtatccggc aggtcgccgc cgccgccgcg gtggtgcccc
     2581 acggccagct ccgagcacat ccactggatg acccggttga ggtccgagcg cgtggccagg
     2641 tccggcagga gggccgcgta cttcgccttc atggccttcc agtcggcgcc gtgcatgttg
     2701 ggggcgtaga agtagtcccg gttgatgcgc cagacctcgt cgaggatctg ggcccactcc
     2761 tggcggggct ccaccttcac ctgcaagccc tccagcgcca ccttgccctt gcccgcttcc
     2821 ggcttgccga tggtgggaat gatcgtcacg gcctcgcgca ggcgggtgag ggccttcttg
     2881 ccgtcagcgg agaggctgta cccgtcggac ttgtccacca gcacggtctc ctcgcgcttc
     2941 ttcaggtcga agcggcagag ggccatggcc tcgccccggt tgaagcggtt ggcgccgccc
     3001 gcctggcggc ggtagaagag ggtccccgcc tcgccggcct ccaggtccgc gaagaaggcg
     3061 gacttggcgg cctcgatggg gacgatgcgc tcggccaggc cctcgaagtc gatgtggacc
     3121 ttcacctccg ccttgccgtc cttcttctcg tcggccttgg gggcgccggc ctcctcgtcg
     3181 ctctccttgg ccaggggcga gggggtgtcc ttggccagca ccatgaggta gaggtccccg
     3241 cgcatgaggg catcggcgtt ggactgggcg aaccagtcgc gcacgggccc ggcctcggtg
     3301 ctggcggtga agtagaggta cttgccgctg cggtcgaaga ccggttcaca ggcatcggcc
     3361 aatccgtcgg tcaggggcgt ggacttgtcc tcctccaagg cgtagacgtg gatgcgcagc
     3421 atcccggatt ccgtgttgcg ggtataggcc aggaaccggg aatccggcga ccagttgtgg
     3481 ttcagggtgg gcccgggggt gtagagcacc tcgctggaca cggccttcac ggcgccggtg
     3541 gcgaggtcca ggatgcgcag cgccagggcg ttgtccgtgt aggcgatctt cttcccgtcc
     3601 ggcgaccact tgaggttgtc gtagaagccc gcgcccttca gggcaaagga ccgcacttcg
     3661 cccttgccgt cctgggcctg gaccttcagc gcgtactcgc c
//
LOCUS       DASUDT010000146         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_29977, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000146 DASUDT010000000
VERSION     DASUDT010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29977"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VFV26_03125"
     CDS             complement(<1..518)
                     /locus_tag="VFV26_03125"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4845183.1"
                     /translation="MPSPTRPPRGPKPTRMDADQILDAAQEVFGRDGLRAASLRAIAR
                     QAGCDPALIYYHFDSKEAMFTALLAKRFPPLVEDLRRLADPADGRHTALRLWDVLGLY
                     HRHLGGDPGLRGLIRGEIVRGAEGIQELIQSQVIGAATQVRTLLEQGILRGEVRKDLH
                     TLLSTFFLLKLQL"
     gene            complement(656..940)
                     /locus_tag="VFV26_03130"
     CDS             complement(656..940)
                     /locus_tag="VFV26_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845184.1"
                     /translation="MTQRTIVRVPDEIANKYRFVVVAGKRCEQLQRGAFPKVEVVVPV
                     NKHGQAQDAPKLASFWGQVAVAEVEENRIAFEEAEILTIEDTTVVPISGE"
     gene            1029..2237
                     /gene="coaBC"
                     /locus_tag="VFV26_03135"
     CDS             1029..2237
                     /gene="coaBC"
                     /locus_tag="VFV26_03135"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX4845185.1"
                     /translation="MQIILGITGGVAAYKSADLARLLANQGHRVRCILTEAGARFITP
                     LTLSSLTGEPCYGANPDQGEWRANPSIEHIELARWADLVAVVPATANILGKAANGLAS
                     DLLSTVLLATRAPVLWAPAMNTGMWEHPAVQANLARLRSFGHAVVDPGEGVLACGEEG
                     SGKLAEVASIAEAIQVHGTPKLRSLEGRRVLITSGPTREDLDPVRTLTNRSTGAMGIE
                     LARAFRDVGARVQLVLGGDLPAPWGVETVRVRSAQEMLAACESRWSGADGLVGAAAVA
                     DQRPESSASEKVKKGDGPETLVLVRTPDILATLSAARRADQWILGFAAESENHLAHAA
                     AKLQKKHLDAVLVNDVQGGRAFGAQANTLTPVTAQGPQPPMGPLPKDQLARAVVQWWG
                     QRLEGMERGR"
BASE COUNT          352 a          739 c          818 g          344 t
ORIGIN      
        1 agctggagct tcagcaggaa gaaggtggag aggagggtgt ggaggtcctt ccgcacctcg
       61 ccgcgcagga tgccctgctc gagcagggtc cggacctggg tggccgcgcc gatcacctgg
      121 ctctggatca gctcctggat cccttcggcc ccccggacga tctcgccgcg gatgaggccc
      181 cggaggcccg ggtcgccccc caggtggcga tggtagaggc ccagcacatc ccagagccgg
      241 agggccgtgt ggcgcccgtc ggcgggatcc gccaggcgcc gcagatcctc cacgaggggc
      301 gggaagcgtt tggccagcag ggccgtgaac atggcctcct tgctgtcgaa gtggtagtag
      361 atcagggccg gatcgcagcc ggcctgccgg gcgatggcgc gcaggctggc ggcgcggagg
      421 ccatcccgcc cgaagacctc ctgggcggca tccaggatct gatctgcatc catccgggtg
      481 ggcttggggc cgcggggggg gcgggttgga gagggcatgg ggctccaatt caacgttcgt
      541 tgaatcatga agttttccga ggtgcccggc aagggttatt tcatcgaccg tggaaatatg
      601 atgtgaatac gaaaaagccc ccgggaaggg ggctctctca ataggattct ggcgtttatt
      661 cgccggagat gggtaccacc gtggtgtcct cgatggtgag gatctcggcc tcttcgaagg
      721 cgatgcgatt ttcctcgacc tcggccacgg ccacctggcc ccagaaggag gcgagcttgg
      781 gggcatcctg ggcctggccg tgcttgttca cgggcaccac cacctcgact ttggggaagg
      841 cgccgcgctg aagctgctcg cagcgcttgc cggccacgac gacgaagcgg tacttgttgg
      901 cgatttcatc agggacgcga acgatggtgc gctgggtcat gggccactcc gaaccaggaa
      961 gcatagcacc tggtggagct ttgatcaatg cgcctggagt agcatggagg gttcctggag
     1021 cgcatccgat gcagatcatc ctcggcatca ccggcggagt ggccgcctac aagtccgctg
     1081 atctggcccg gttgctcgcg aaccaggggc accgggtccg ctgcatcctc acggaggcgg
     1141 gggcccggtt catcaccccc ctcaccctca gcagcctgac gggcgagccc tgctacggcg
     1201 ccaaccccga ccagggggag tggcgggcca atccgagcat cgagcacatc gagctggccc
     1261 gctgggccga cctggtggcc gtggtgcccg ccacggccaa catcctgggc aaggccgcca
     1321 acggcttggc cagcgacctg ctcagcaccg ttctgctggc cacgcgggcg ccggtgctgt
     1381 gggccccggc catgaacacg ggcatgtggg agcatcccgc cgtgcaggcc aacctcgccc
     1441 ggctgcgctc cttcggccat gcggtggtgg atcccggcga gggtgtcctg gcctgcgggg
     1501 aggagggctc cggcaagctg gcggaggtgg cctccatcgc cgaggccatc caggtccacg
     1561 gcacccccaa gctgcgcagc ctggaagggc gccgggtgct catcacctcg ggccccacgc
     1621 gggaggacct ggatccggtg cgcaccctca ccaaccgcag caccggcgcc atgggcatcg
     1681 agctggcccg ggccttccgg gatgtggggg cgcgggtcca gctggtgctg gggggcgacc
     1741 ttccggcccc gtggggcgtg gagacggtcc gcgtccgcag cgcccaggag atgctggcgg
     1801 cttgcgaatc ccgatggagt ggcgccgacg gcctcgtggg ggccgcggcg gtggccgatc
     1861 agcgtccgga atcctcagct tccgaaaagg tgaagaaggg cgatgggccg gaaaccctgg
     1921 tgctggtccg caccccggac atcctggcca ccctgtccgc cgcccggcgt gccgaccagt
     1981 ggatcctcgg cttcgccgcc gagagcgaga accacctggc ccatgccgcc gccaagctcc
     2041 agaagaagca cctggacgcg gtgctggtga acgatgtcca gggcggccgg gccttcggcg
     2101 cccaggccaa caccctgacg cccgtcacgg cccaggggcc tcagccgccc atggggcccc
     2161 ttcccaagga tcagctggcc cgggccgtgg tgcagtggtg gggccagcgt ctggaaggca
     2221 tggagcgagg ccggtagggc ttcagaacgc ggg
//
LOCUS       DASUDT010000147         2698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1289211, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000147 DASUDT010000000
VERSION     DASUDT010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289211"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2487
                     /locus_tag="VFV26_03140"
     CDS             <1..2487
                     /locus_tag="VFV26_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3516 domain-containing protein"
                     /protein_id="HEX4845186.1"
                     /translation="AEGKGLSLYPAQEEAILELFEGKNVILNTPTGSGKSLVASALHF
                     GSLAAGRRSVYTCPIKALVNEKWMALCREFGPENVGLSTGDATVNRDAPILCCTAEIL
                     ANMALCEGAGADVQDVVMDEFHYYADRERGFAWQVPLLAMPQTRFLLMSATLGDTAFF
                     EAELTRLNSLPTVAVKATDRPVPLAFTYAELPLASTLENLLAEGKGPVYLVHFTQAEA
                     ATSAQDFTSLNVCTRDEKTALAAEIGDFKFNSPYGPDLKRWLRQGIGLHHAGLLPKYR
                     ILVERLAQKGLLKIICGTDTLGVGINVPIRTVLFTKLCKYGGQKTSILSARDFHQISG
                     RAGRKGFDTVGYVVAQAPEHVIENLRLSQKPGKKFVKRPAPERNYAHWDKTTFERLQA
                     AAPERLVSRFQVSHGMLLNVLSRPDDGCKAMRALIHDSHETDHQKAAHFRRGWQLFKT
                     LVVRGIVAFVPPDERGRKLRVNADLQADFSMDETLSLYLLDTLPQLDPESPDYALDLI
                     TLVESILENPDFILRSQLHKLKGQAVAEMKMAGIEYDQRMEELEKLEYPKPLRDFIYA
                     TFNEFADRHPWVGQENIRPKSIVREMFESYLSFADYVRTYELQRAEGLLLRHINSTFK
                     VLSKTVPDAAKNADVWEMEAYLAAMLRQVDSSLLDAWEQMQNPDFERKEEALAIPGAE
                     EAARDITRDRKAFAAAIRARLFALLHALHSGDWEEALAVLQEAAGPDLADEPSDGEGE
                     PWTAERLKALFTTYTATHDGPRLDPEGRNQRHTYVQPKPGDPRTLIVQQMLVDTGELN
                     DWALELEVDLDASRRDRQPVLRLLRFGEFR"
BASE COUNT          498 a          968 c          852 g          380 t
ORIGIN      
        1 gcggagggca aggggctgag cctctatccc gcccaggagg aggccatcct ggagctgttc
       61 gaggggaaga acgtcatcct caacaccccg acgggctcgg gcaagtcgct ggtggcctcg
      121 gccctgcact tcggctcgct ggcggccggt cgccggtccg tctacacctg ccccatcaag
      181 gccctggtaa acgaaaaatg gatggccctc tgccgggagt tcgggcctga aaacgtgggc
      241 ctctccaccg gggatgccac cgtcaaccgg gacgcgccca tcctctgctg caccgcggag
      301 atcctcgcca acatggctct gtgcgaaggg gccggggccg atgtccagga cgtggtcatg
      361 gacgagttcc actactacgc ggaccgcgag cggggtttcg cctggcaggt gcccctgctg
      421 gccatgcccc agacccggtt cctcctcatg agtgccaccc tgggcgacac ggccttcttc
      481 gaggcggagc tcacgcgcct caacagcctg cccacagtgg ctgtgaaggc cacggaccgg
      541 ccggtgccgc tggccttcac ctatgcggaa ctgcccctcg ccagcaccct ggagaacctc
      601 ctcgccgagg gcaaggggcc cgtgtacctg gtgcatttca cccaggccga agccgccacc
      661 agcgcccagg acttcaccag cctcaacgtc tgcacccgcg acgagaagac agcgctggcg
      721 gccgagatcg gcgacttcaa gttcaacagc ccctacggcc ccgatctgaa gcgctggctg
      781 cgccagggca tcggcctgca ccacgcgggc ctgctgccca agtaccgcat cctcgtggag
      841 cggctggccc agaaggggct gctcaagatc atctgcggca ccgacaccct gggcgtgggc
      901 atcaacgtgc ccatccgaac ggtgctcttc accaagctct gcaagtacgg cggccagaag
      961 acgagcatcc tcagcgcccg ggacttccac cagatctccg gccgggccgg ccgcaaggga
     1021 ttcgacaccg tgggctacgt ggtggcccag gctccggagc acgtgatcga gaacctgcgc
     1081 ctgtcgcaga agcccgggaa gaagttcgtg aagcgcccgg cgccggagcg caactacgcc
     1141 cactgggaca agaccacctt cgagcgcctc caggccgcgg cgccggagcg gctggtgagc
     1201 cgcttccagg tcagccacgg gatgctgctc aacgtgctca gccgccccga tgacggatgc
     1261 aaggccatgc gcgccctcat ccacgacagc cacgagacgg accaccagaa ggccgcgcac
     1321 ttccggcgcg gctggcagct cttcaagacc ctggtggtgc gcggcatcgt ggccttcgtc
     1381 cccccggacg agcgcgggcg gaagctgcgc gtgaacgccg acctccaggc cgacttcagc
     1441 atggatgaga ccctcagcct ctacctgctg gacaccctgc cccagctgga tcccgaatcg
     1501 ccggactacg ccctggacct catcaccctc gtggagagca tcctcgagaa tccggacttc
     1561 atcctgcgca gccagctcca caagctgaag ggccaggctg tggccgagat gaagatggcg
     1621 ggcatcgaat acgatcagcg catggaggag ctggagaagc tcgaataccc caagcccctg
     1681 cgcgacttca tctatgccac gttcaatgaa ttcgcggaca ggcacccctg ggtgggccag
     1741 gagaacatcc ggcccaagtc catcgtgcgg gagatgttcg aaagctacct gagcttcgcc
     1801 gactacgtgc gcacctacga gctgcagcgg gcggagggcc tcctgctgcg ccacatcaac
     1861 agcaccttca aggtgctgtc caagaccgtg cccgacgcgg ccaagaacgc cgatgtgtgg
     1921 gagatggagg cctacctcgc cgccatgctc cgacaggtgg actccagcct cctggatgcg
     1981 tgggagcaga tgcagaatcc cgacttcgag cggaaagagg aggccctcgc catccccggc
     2041 gccgaggagg ccgcccggga catcacccgc gaccggaagg ccttcgccgc cgccatccgc
     2101 gcccggcttt tcgccctgct ccatgccctg cacagcgggg actgggagga ggcactggcc
     2161 gtgctccagg aggccgcagg cccggattta gcagatgagc cgagcgacgg cgaaggcgag
     2221 ccctggaccg cggagcgcct caaggccctc ttcaccacct acacggccac ccacgacggt
     2281 ccgcgcctgg accccgaagg ccgcaaccag cgccacacct acgttcagcc caagcccggc
     2341 gacccgcgga ccctcatcgt ccagcagatg ctggtggaca cgggcgagct gaacgactgg
     2401 gccctggagc tggaggtgga tctcgacgcc tcccgccggg accgccagcc cgtgctgcgg
     2461 ctcctgcgct tcggggagtt ccggtagcgg ccgtacccag acccgagccc cgcccagggt
     2521 cgcctctcaa accaggtggc gaccaaacat caagatccac cacggagaca ctgagaccac
     2581 tgagggggaa cggagatctc cgtgcccctc catcatgggc aggccggagg ccgcttccgg
     2641 ctttgccgga agccacggga ggcgccggtc ccggataccc cacgatggat tccgggac
//
LOCUS       DASUDT010000148         2489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_626178, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000148 DASUDT010000000
VERSION     DASUDT010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626178"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VFV26_03145"
     CDS             complement(<1..530)
                     /locus_tag="VFV26_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845187.1"
                     /translation="MKPFLLETLLHWVAVGFYILATVLFVHALLWNHVHRVRWAKWAT
                     ALGLLPHAAALIMRWIEVGHGPYMAKYEVLSSNAWIAVLMLLVVLWRRPSWAGLALVA
                     LPASILMMGMGLLASPQARDLPPTLRSIWLVFHIFFTKLAVGAFLLAFAAAVILLRKL
                     KGAASRFLERFPAAEVL"
     gene            complement(527..1060)
                     /locus_tag="VFV26_03150"
     CDS             complement(527..1060)
                     /locus_tag="VFV26_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845188.1"
                     /translation="MRTLLALAFLTLAFGCSRVSPSEARMLVARYNQVVSDAYRKGDI
                     RLIDEVVGPDAPDGRRLTGLIGVRIDMGLILDARLEVLEVVRVEHLKDELQVRTREQW
                     RYRDVRTSTGQQVGEASVDHYEMLYRFSYHKGTWLVEETKFTAPPKIGRKEVPWNIDA
                     KDAHGMMSPQVKEGPKP"
     gene            complement(1063..2343)
                     /locus_tag="VFV26_03155"
     CDS             complement(1063..2343)
                     /locus_tag="VFV26_03155"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HEX4845189.1"
                     /translation="MFSSIKRFLRRPAVIVAEIFVITAACSLGAGLAQAGRSPAAEVA
                     QLQQHGALVSALVRGLALDHVFTSLWFLAALVFATASLSIVVAEQIRRLRATWGQAPA
                     EAQFRNAPFRREFTRPASTDAVAGTHIRTQGRLGLTGSPLFHTGLLCVILAGALQALF
                     GVQAVVDVYEGEVLPATTEAWGAQWPGPLGRPFRLDEPLTLLSVTSTRYETGDLMNLR
                     LKLAEQGPGGVQEREMGINDELPLSRGRLYVEAQHGPAALVEWAAPSTEPLRTAALLE
                     KKETAAFGAYTQGPGTLRARIRVPMPADGRRPDHAEVQILDGASRLAEGVLKPGEALP
                     LPGGGLLKLHGLPYWARLHGNHDPAIGLAYLGFILALVGAGLTYGVTRVDELVAVTPE
                     GDRERVVVALRPHRFAPLFQERFERLVRDHGGEV"
BASE COUNT          415 a          835 c          862 g          377 t
ORIGIN      
        1 agcacttccg cggcgggaaa gcgctccagg aacctgctgg cggcgccctt cagcttccgc
       61 agcaggatca ccgccgcggc gaaggccagc aggaaggccc ccacggccag cttcgtgaag
      121 aagatgtgga acacgagcca gatggagcgc agggtcggcg gcaggtcgcg cgcctgggga
      181 ctggccagca gacccatgcc catcatgagg atggaggccg gcagggccac cagggccagg
      241 ccggcccagc tgggccggcg ccacagcacc accagcagca tgagcacggc gatccaggca
      301 ttggaggaca gcacttcgta cttcgccatg tagggcccgt ggcccacttc gatccagcgc
      361 atgatgagcg ctgcggcgtg gggcagcagg cccagggctg tggcccactt ggcccagcgc
      421 acccggtgca cgtggttcca caacagggca tggacgaaga ggacggtggc caggatgtag
      481 aaacccaccg ccacccagtg gaggagcgtc tcgagcagga acggtttcat ggtttcgggc
      541 cctccttcac ctgcgggctc atcatgccgt gggcgtcctt ggcgtcgatg ttccagggga
      601 cttccttgcg cccgatcttg ggcggcgccg tgaacttggt ctcctccacc agccaggtcc
      661 ccttgtggta gctgaaccgg tagagcatct cgtagtggtc caccgaggct tcgcccacct
      721 gctgtccggt gctggtcctc acatcccggt agcgccattg ttcccgggtg cggacctgaa
      781 gctcatcctt cagatgttcg accctgacca cctccaggac ctccaggcgg gcatccagga
      841 tgaggcccat gtcgatgcgc acgccgatca atccggtgag gcgccggcca tcgggggcat
      901 ccgggcccac cacctcgtcg atgaggcgga tgtccccctt gcggtaggca tcgctcacca
      961 cctggttgta ccgggccacc agcattctgg cctcgctggg agacacccgt gagcagccga
     1021 aggccagggt caggaaggca agggcaagga gggtccgcat cgtcatacct caccaccatg
     1081 gtcccgtacc agccgctcga agcgctcctg gaacagcggg gcgaagcgat ggggccgcag
     1141 cgccaccacc actcgttccc ggtcgccctc gggcgtgacg gccaccagct catccaccct
     1201 cgtcactccg taggtgaggc ccgcccccac cagggccagg atgaaaccca ggtaggccag
     1261 cccgatggcg gggtcatggt tgccgtggag ccgggcccag tagggcaggc cgtgcagctt
     1321 cagcaggccg ccgccgggca ggggcagggc ctccccaggt ttgaggacac cctccgcaag
     1381 gcgggaggcg ccgtcgagga tctgcacttc ggcgtggtcc gggcgccggc catccgctgg
     1441 catcggcacc cggatgcggg cccggagcgt tccgggaccc tgggtgtagg ccccgaaggc
     1501 ggcggtttcc ttcttctcca gcaaggcggc cgtacgtagg ggctcggtgg acggggctgc
     1561 ccattccacc agcgccgcgg gtccgtgctg ggcctcgacg tagaggcggc cccggctgag
     1621 aggcagttcg tcattgatgc ccatctcgcg ttcctgtacg cctccggggc cctgctcggc
     1681 cagcttcagg cggaggttca tcagatcgcc cgtttcatac cgggtgcttg tcaccgagag
     1741 cagcgtcagg ggttcatcca gacggaaggg cctccccagg gggccaggcc actgggcgcc
     1801 ccaggcttcg gtggtggcgg ggagaacctc tccttcgtag acgtccacca cggcctggac
     1861 accgaacagg gcctgcaagg cgccggcgag gatcacgcag aggaggcccg tgtggaacaa
     1921 gggcgatccc gtcaacccca ggcggccctg ggtgcggatg tgggtgcccg ccaccgcatc
     1981 tgtggatgcg ggccgcgtga actcgcgccg aaagggcgca ttccggaact gggcctcggc
     2041 gggagcctgg ccccaggttg cgcggagccg gcggatctgc tcggccacca cgatggacag
     2101 cgaggccgtg gcgaagacga gcgcggccag gaaccacagg cttgtgaaga catgatccag
     2161 ggccagccct cggacgaggg cgctgacgag ggccccgtgc tgctgcagct gggccacctc
     2221 ggccgcgggg gaccggcccg cctgggccag gccggcaccc aggctgcatg cggcggtgat
     2281 gacgaagatc tccgcgacga tgacggccgg gcggcgcagg aaccgtttga tggaggagaa
     2341 caagtctcac cttccccggg atgcgtctat gaatgggagg tggatcacca ggtctccccc
     2401 ccgatgacct ggctgtgctt ggctgtcgcc tggcaattgc cctgggcata accctgaggt
     2461 gcggccttga tgaactcctt gatcaccac
//
LOCUS       DASUDT010000149         3604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_338994, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000149 DASUDT010000000
VERSION     DASUDT010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3604
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338994"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VFV26_03160"
     CDS             <1..1272
                     /locus_tag="VFV26_03160"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4845190.1"
                     /translation="MAYGLDLVGVKHVVSVSTLINRLDAQGVDLSAVKGRLFLLDEAG
                     KKITLATKLAAAFRARFNWAPLLAAQPPETAAVLFTSGSESHPKAVPLSHGNLLTNIR
                     DAALALNFRQDERVMGCLPPFHAFGLTTTTLLPLLVGLRVVYHPNPTEGRMLARLIEA
                     YHATLLVGTPTFLGGILRVAEDRHLESLRIVVSGAEKCPDQIYATLARRWPKTTVLEG
                     YGITECSPVVSVNREDDPRTGTIGKPLLSVEWAIVDLETGRRVEPGQPGMLLVRGPSV
                     FSGYLNPDVESPFETFEGQAWYRTGDLVRQDRGVLVFTGRLKRFVKLGGEMVSLPAIE
                     EALSRRFQGDDETEPLLAVEASQEELNPDLILFSVAGIARDDANAAIRAAGLSSLHNI
                     RVVRQIDQIPTLGTGKTDYRTLKALLAEVEG"
     gene            complement(1269..2408)
                     /locus_tag="VFV26_03165"
     CDS             complement(1269..2408)
                     /locus_tag="VFV26_03165"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX4845191.1"
                     /translation="MNRRDDLLILAAGRLPQGRYGGSLAGSGAVALGLSAIEGLLAAA
                     PLPRPGSLIWGMARSHTQGMNPARTLALKAGLPSDTPAFTVNMACGSSLQALILAAQR
                     LKDGDAPVLAGGSEAMSDTPHLVPGLRWGFRMGHRSLPDVMHQDGLRCPATGLLMGET
                     IERLAAKRGITRLEADSWATESHRRAARADFQAERLLHPALDHDESIRPDATVEALAR
                     LAPIFDPGGQVTAGNASALSDGAAALLIARRDQAEGARPLARILAWSEAGVDPLDMGE
                     APVPAVRRLLAAQGLSVADIDLWELNEAFSAQLLVCQRQLGIQEDRLNVAGGGVALGH
                     PIGATGARIVVTLIHQLRARGGGLGVATLGIGGGLGLALLIEAGS"
     gene            complement(2405..2974)
                     /locus_tag="VFV26_03170"
     CDS             complement(2405..2974)
                     /locus_tag="VFV26_03170"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ElyC/SanA/YdcF family protein"
                     /protein_id="HEX4845192.1"
                     /translation="MHHQQIHQAESLPVMGGAVLVLGAGVYGDGEPTELLQGRLRTAL
                     DLYQSGKVRWFLVSGDNRHPSYNEPQAMRRWLVKQGVPPTRIVSDYAGLRTWDSLKRA
                     QAVFGQQQVVIVTSDFHLPRALYLADRMGLRAWGVPASTEDRPRMSRVRYWVREYIAR
                     HLALWDAWFPPDARLGPREPTPDDWDPAP"
     gene            3231..>3604
                     /locus_tag="VFV26_03175"
     CDS             3231..>3604
                     /locus_tag="VFV26_03175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845193.1"
                     /translation="MALILAAGGTGCFRATGLARPTVAVEEIPASGGDRLAGLKATSG
                     PGDFYIGNDSVQLAVDGAAFGDREGQFGAPSGGAILDVGNIALDQSFKRVSMPTDLVE
                     RLGPVVNQDPDLPLVFDRYVPGT"
BASE COUNT          539 a         1232 c         1292 g          541 t
ORIGIN      
        1 atggcctacg gcctggacct ggttggcgtg aagcatgtgg tttccgtctc caccctgatc
       61 aaccggctgg atgcccaggg cgtggacctt tccgcggtga agggccggct attcctgctg
      121 gacgaggccg ggaagaaaat caccctggcc accaagctgg cggcggcctt ccgggcccgc
      181 ttcaactggg cgcctttgct ggccgcgcag cctccggaga ctgcggcggt gctgttcacc
      241 agcggcagcg aaagccatcc caaggccgtg cccctgagcc acgggaacct cctgacgaac
      301 atccgggatg ccgcgctggc cctgaatttc cggcaggatg agcgcgtcat gggctgcctg
      361 ccgcccttcc acgccttcgg cctcaccacc accaccctgc tgccgctgct ggtggggctg
      421 cgggtggtct accatcccaa ccccaccgag gggcggatgc tggcccggct catcgaggcc
      481 taccacgcca cgctgctggt gggcacgccc accttcctgg gcggcatcct gcgggtggcc
      541 gaggaccgcc acctggagtc cctccggatc gtggtgtccg gggcggagaa atgccccgac
      601 cagatctacg ccaccctggc ccggcgctgg ccgaagacca cggtgctgga gggctacggc
      661 atcacggagt gctcgccggt ggtttcggtg aaccgcgagg acgacccccg gacgggaacc
      721 atcgggaagc cgctgctgtc ggtggaatgg gccatcgtgg acctggagac cggccgccgg
      781 gtggagcccg ggcagccggg catgctcctg gtgcggggcc ccagcgtctt ctccggctac
      841 ctgaacccgg acgtggaatc gcccttcgaa accttcgaag ggcaggcctg gtaccgcacc
      901 ggggacctgg tgcgccagga ccgcggcgtc cttgtgttca cggggcgtct caagcgcttc
      961 gtgaagctgg gcggcgagat ggtctccctc cccgccatcg aagaggccct gtcccggcgc
     1021 ttccaggggg atgacgagac cgagcccctg ctggccgtcg aggcgtcgca ggaagagctg
     1081 aatcccgatc tgatcctgtt ttcggtggcg ggcatcgccc gggacgatgc gaatgcggcc
     1141 atccgcgcag cgggcctctc gtccctgcac aacatccgcg tggtgcgcca gatcgaccag
     1201 attcccaccc tgggtaccgg caagacggac taccggacgc tcaaggcgct cctggccgag
     1261 gttgaaggct aagaacccgc ttcgatcagc agcgccagcc cgagcccccc gccgatgccc
     1321 agggtggcca cgcccaggcc tccgccccgc gccctcagct ggtggatcag ggtgacgacg
     1381 atgcgggcgc cggtggcccc gatggggtgc cccagggcca cgcccccgcc ggccacattc
     1441 aggcggtcct cctggatgcc cagctgccgc tggcagacca ggagctgggc ggaaaaggcc
     1501 tcgttgagct cccacagatc gatatccgcc acagacagtc cctgggccgc caggaggcgc
     1561 cgcacggcgg gtacgggggc ctcgcccatg tccagcggat ccaccccggc ttcgctccac
     1621 gccagaatcc gggccagggg tctggccccc tctgcctggt cccgccgggc gatgagcagg
     1681 gccgcggccc cgtcggacag ggcggaggcg ttgcccgccg tgacctgacc cccgggatcg
     1741 aaaatcggcg ccagccgggc gagggcctcc acggtggcat cgggccggat ggattcgtca
     1801 tggtcgaggg ccggatgcag gagccgctcg gcctggaaat ccgccctggc ggcgcggcgg
     1861 tggctttcgg tggcccacga atcggcttcc aggcgcgtga tgccccgctt ggcggcgagg
     1921 cgctcgatgg tctcccccat gagcaggccg gtggcagggc agcgcaatcc gtcctggtgc
     1981 atgacgtccg gcaggctccg gtggcccatt cggaaacccc agcgcaggcc aggcaccagg
     2041 tgcggggtgt cggacatggc ctcgctgccg cccgcgagga ccggcgcgtc cccgtccttc
     2101 agccgctggg cggcgaggat gagggcctgg aggctggaac cgcaggccat gttgacggtg
     2161 aaggcgggtg tgtcggaagg gaggccggcc ttcagggcca gggtgcgggc gggattcatg
     2221 ccctgggtgt ggctgcgggc catgccccag atcaggctgc cgggccgggg caggggggcg
     2281 gccgccagca ggccctcgat ggcggacagg ccgagggcga cggcgccgga acccgccagg
     2341 ctgccgccgt agcggccctg gggcaggcgt cccgcggcga ggatcagcag gtcgtctcga
     2401 cggttcacgg tgccggatcc cagtcatcgg gtgtgggttc ccgggggccg agccgggcat
     2461 ccggcggaaa ccaggcgtcc cacagggcga ggtgccgggc gatgtactcg cggacccagt
     2521 agcggacgcg gctcatgcgt ggccggtctt ccgtggaagc gggcacgccc caggcccgca
     2581 gacccatgcg gtcggccagg tagagggccc gggggaggtg gaaatccgag gtgacgatga
     2641 ccacctgctg ctggccgaag acggcctggg cccgcttcag gctgtcccag gtgcggagcc
     2701 ccgcgtaatc gctcacgatg cgggtggggg ggaccccctg cttcacgagc cagcgccgca
     2761 tggcctgggg ttcgttgtac gaggggtgcc ggttgtcgcc ggagaccagg aaccaccgga
     2821 cctttccgct ctgatagaga tccagggccg tgcggaggcg cccctggagg agttccgtgg
     2881 gctccccgtc cccgtagacg ccggccccca gcaccagcac cgcgccgccc atgacgggaa
     2941 gagactctgc ttggtggatt tgctggtggt gcatggctgg gaaccttccc agggtccaga
     3001 gcaaatctcc caggagggga agcgccagga ccagcagcag ggtccgccgg tgtggccagc
     3061 agcgatgaag aaaggcggag atcggcatcg tgagttagca tagacctttc gtacgtccca
     3121 gccccatgga cctcccgcct gaacgagacg ccttgatgaa tatgagccct gatcccgcgg
     3181 ttttcccgat ccgtctgtcc tcccggcgcg tgcagcgggt tctggccccc ttggccctga
     3241 tcctggccgc gggggggacg ggctgcttcc gggccacggg cctggccagg cccaccgtgg
     3301 ccgtggagga gatcccggcc tccggaggcg accggcttgc cggattgaag gccacttccg
     3361 ggcccggaga cttctacatc ggaaacgatt ccgtccagct ggccgtggac ggggccgctt
     3421 ttggagaccg tgaaggccag ttcggcgcac cttcgggcgg agccatcctg gatgtgggca
     3481 acatcgccct cgaccagagc ttcaagcggg tgtccatgcc cacggacctg gtggagcgcc
     3541 tgggccccgt ggtcaaccag gaccccgatc tcccgctggt cttcgacaga tatgtccctg
     3601 gaac
//
LOCUS       DASUDT010000150         5377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1708373, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000150 DASUDT010000000
VERSION     DASUDT010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708373"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VFV26_03180"
     CDS             complement(<1..617)
                     /locus_tag="VFV26_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase cyclase
                     subunit"
                     /protein_id="HEX4845194.1"
                     /translation="MPAKRVIPCLDVKNGRVVKGVQFKQLRDLGHPVDLARRYDAEGA
                     DELVFLDIAASLENRGTREAWVRDVAHELSIPFTVGGGVSSVTDARSLLRSGADKVAV
                     NTAAALRPALVSELADAFGRQCVVVAVDVKRDEALGWRVFLKGGTEATDRAALDWLWE
                     LNDLGAGEILLTSMDRDGTGEGFDLPLIEKASGLPIPLIASGGAGR"
     gene            complement(617..1330)
                     /locus_tag="VFV26_03185"
     CDS             complement(617..1330)
                     /locus_tag="VFV26_03185"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]
                     imidazole-4-carboxamide isomerase"
                     /protein_id="HEX4845195.1"
                     /translation="MQLIPSMDLMRGRLVRLRHGDPKQATFYDLSPEAWLEQLAEAGA
                     RRIHLVDLDGAFGQPRQGAFTGFPARFPAIRFQLGGGLRSRAAIQEALDLGFEAVVGT
                     LAVEQPTALRGLPGGCIVAALDLKGDRVVTHGWQSPSVCASTDVFEALLTLGFDRALV
                     TDVSRDGTLAGPGLEAAAWVAKEGFCVQASGGLKDLADLGPLSALPGVVGAISGKALM
                     EGFIPLDDPRTRAALEGGA"
     gene            complement(1344..1979)
                     /gene="hisH"
                     /locus_tag="VFV26_03190"
     CDS             complement(1344..1979)
                     /gene="hisH"
                     /locus_tag="VFV26_03190"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX4845196.1"
                     /translation="MSAITLIDYDAGNLASLEGALDRLGLVSQRAATPDEAAPGGPIV
                     LPGVGHFEAAQKSLRERGWWRALPGLVAEGRPVLGICLGLQLLAEGSEEAPRASGLGL
                     LPGIVRRLGPGVKVPHMGWSQVRRNYPHPALADPQGAWLYFVHSYALEPTGETVYVAE
                     HGRPFAAIEARGNVMGFQPHPEKSGPAGLLLLQQCLVWMGASAPIPEVPCN"
     gene            complement(1976..2560)
                     /gene="hisB"
                     /locus_tag="VFV26_03195"
     CDS             complement(1976..2560)
                     /gene="hisB"
                     /locus_tag="VFV26_03195"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX4845197.1"
                     /translation="MRTATLHRTTAETDVNLSLHLDGGATAIRTGLAFFDHMLMQLAK
                     HGGFGLEVQAKGDLPVDSHHLVEDVGLCLGEALKEALGDRAGIVRFAHAYAPLDEALA
                     RVVVDLSGRPWCEFHAELPAIVLGDGFQTEMVREFFIALAMRGGLAFHADLLRGANTH
                     HKVEALFKALALALRQATRAGDGDVPSTKGTLSA"
     gene            complement(2557..4311)
                     /locus_tag="VFV26_03200"
     CDS             complement(2557..4311)
                     /locus_tag="VFV26_03200"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4845198.1"
                     /translation="MTFLRPDLADLPAYQRPPEPSAGRRLHMNEAAADWPVEAREALL
                     ARLRALPFHLYPERQAELTERLRKRLGAPEGGLLLGPSSGALLDLVATAGLSAGDEVA
                     IPDPGFSLYPMLVRRHGGRVRPVPQGTDFPLEPWFAALDCRQLWLTLPNNPTGAWIPP
                     EALEPLLAAAAARPEPPLVVLDEAYAEFAPATHRLVVDRYPNLLLLRTFSKALASAAW
                     RLGYLVGDPALVSKLATLQLPYSIPAPSLEALDVALDFAAAFEGALRALPERRDRLAG
                     ALTGHRAAPSAANFLHLSPDPSAALEAAGLKVRRLPGSDAARVTVGTEADAARVASGL
                     AATLPAPAPRPRRRLLALDIDGVLIDADRSFMEAVARALAELRPALPWSDGAFRAFKR
                     LGGFNNDFRLTAGALALAEAHGDVDLQPLVEGTLEPSLEGRIRALEPSAQAVVQKHYA
                     DTIRLERPLATLAELRATGWDLAVLTGRPPEELGLAWRVLGFQLPAVCDAAPHLRKPE
                     PAGLLQLADAFRAEEILFAGDTVDDARCLRSAAALRPDLAWRFAALGPDRDRFAAPGD
                     IQSATLRDLLPMLNQENP"
     gene            complement(4393..>5377)
                     /gene="hisD"
                     /locus_tag="VFV26_03205"
     CDS             complement(4393..>5377)
                     /gene="hisD"
                     /locus_tag="VFV26_03205"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR00069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX4845199.1"
                     /translation="GGTVGERWCPLKTVGIYIPGGRAFYPSTLAMTVIPAQVAGVARI
                     VGVTPPKPQPTLPQTSQPGAWGVDPLVLACAAELGLSELYPFGGAQALGWLAYGEPAV
                     DLIAGPGNRFVAEAKRQLIGVCGIDALAGPTELLVIADGSADPAWLAEDLLAQAEHDP
                     DAAAVLVSVDRTLLEAVAAELQARVAASPRRAILEQSLGAHGRLVCADRDLAIALAQA
                     WAPEHLELCVRDAEAWLPFLTAAGALFIGSASAEAFGDYGAGPNHVLPTDRSARYSSP
                     LGVATFLKRQSLLRLSPTDAAAMAPWVERLAEAEGLIHHGRSAQARSHHHP"
BASE COUNT          762 a         1842 c         2108 g          665 t
ORIGIN      
        1 cggcctgcgc caccggaggc gatgaggggg atgggcagcc cggaggcctt ttcgatcagc
       61 ggcaggtcga agccctcgcc ggtgccgtcc cggtccatgg aggtgagcag gatctctccg
      121 gcccccaggt cattgagctc ccagagccag tccagggccg cgcggtccgt ggcttcggtg
      181 ccgcccttca ggaagacccg ccagcccagg gcctcgtcgc gcttcacgtc cacggccacc
      241 accacgcact ggcggccgaa ggcgtcggcc agttcggaga ccagcgccgg gcgcagggcg
      301 gcggcggtgt tcacggccac cttgtcggcg cccgaacgca gcaggctgcg ggcgtcggtc
      361 acgctggaga cgcccccgcc cacggtgaag gggatgctca gctcatgggc cacatcgcgc
      421 acccaggcct cccgcgtgcc gcggttctcc agcgaggcgg cgatgtcgag gaagaccagt
      481 tcatccgcgc cctcggcatc gtagcggcgg gccaggtcca cggggtgtcc gaggtcgcgg
      541 agctgcttga actgcacgcc cttcaccacg cggccgttct tcacatccag gcaggggatg
      601 acacgcttgg cgggcatcag gcgccccctt ccagggccgc gcgggtgcgc ggatcgtcca
      661 gggggatgaa gccctccatc agggccttgc cgctgatggc gcccaccacg ccgggcaggg
      721 ccgacaacgg cccgagatct gccagatcct tgaggccgcc ggaggcctgc acgcagaagc
      781 cctccttggc cacccaggcc gccgcctcca gtcccggccc cgccagcgtc ccgtcccggc
      841 tcacgtcggt gacgagggcc cggtcgaagc ccagggtgag cagggcctcg aagacatcgg
      901 tggaggcgca gacgctgggg gactgccagc catgggtgac gacgcggtcg cccttgaggt
      961 cgagggctgc gacgatgcat ccgccaggca ggccccggag ggctgtgggc tgttccacgg
     1021 cgagggtgcc caccacggcc tcgaagccca ggtccagggc ctcctggatg gcggcgcggc
     1081 tccgcaggcc gccgcccagc tggaagcgga tggccgggaa gcgggccggg aacccggtga
     1141 aggcaccttg gcggggctgc ccgaaggcgc cgtccagatc caccaggtgg atgcgccggg
     1201 ccccggcctc ggccagctgc tccagccagg cctccgggga caggtcgtag aacgtggcct
     1261 gcttcggatc gccgtggcgc agccgcacca ggcggccgcg catcaggtcc atgctcggga
     1321 tcagctgcac atcgcctccg gcgtcaattg catgggacct ccgggatggg cgcggaagcg
     1381 cccatccaga ccaggcactg ctgcagcagc aggagccccg cgggcccgga cttctcggga
     1441 tggggctgga agcccatgac gttgccccgg gcttcgatgg cggcgaaggg gcggccatgc
     1501 tccgccacat agaccgtctc cccggtgggc tccagggcgt agctgtgcac gaagtacagc
     1561 caggcgccct ggggatccgc cagggccggg tggggatagt tgcggcgcac ctggctccag
     1621 cccatgtggg ggaccttcac gccgggaccc aggcgtcgca cgatgcccgg gaggagcccc
     1681 aggcccgagg cccggggcgc ctcttcgctg ccttcggcca gcagctggag gcccaggcag
     1741 atgccgagca ccgggcggcc ctcggccaca agtcctggca gcgcgcgcca ccagccgcgc
     1801 tcgcgcagcg atttctgggc cgcctcgaaa tggcccacgc ccggcagcac gatggggccg
     1861 cccggcgcgg cctcgtcagg cgtggcggcc cgctgggaga ccagccccag ccggtcgagg
     1921 gcgccctcca gggaggccag gttcccggcg tcatagtcga tgagggtgat ggcgctcatg
     1981 cggagagggt ccccttggtg gagggcacgt cgccgtcccc ggcgcgggtg gcctggcgca
     2041 gggccagggc cagggccttg aagagggcct cgaccttgtg gtgggtgttc gcgccgcgga
     2101 gcaggtccgc gtggaaggcc agccccccgc gcatggccag ggcgatgaag aactcgcgga
     2161 ccatctccgt ctggaagccg tcgcccagca cgatggcggg cagctccgca tggaactcac
     2221 accagggccg gccggagaga tccaccacca cccgggccag ggcctcgtcc agcggcgcat
     2281 aggcgtgggc gaagcggacg atgcccgcgc gatcgcccag ggcctctttc agggcctcgc
     2341 ccaggcagag gcccacgtct tccaccaggt ggtggctgtc cacgggcaga tcccccttgg
     2401 cctggacctc caggccgaaa ccgccgtgtt tcgccagctg catgagcatg tgatcgaaga
     2461 aggcgaggcc cgtgcggatg gccgttgcgc ccccgtccag gtggaggctc aggttcacat
     2521 cggtttcggc ggtggtccgg tgcagggtgg cggtcctcat gggttctcct ggttcagcat
     2581 cggcagcaga tcgcgcaggg tcgcggattg gatgtccccc ggcgccgcaa agcggtcgcg
     2641 gtcgggcccc agggccgcga agcgccaggc caggtcgggg cgcagggccg cggcgctccg
     2701 caggcagcgg gcgtcatcca cggtgtcgcc cgcgaagagg atctcctcgg cgcggaaggc
     2761 gtccgccagc tgcagcaggc ctgcgggttc gggcttgcgg aggtggggcg cggcatcgca
     2821 gaccgcgggc agctggaagc ccagcacccg ccaggccagg cccagctcct ccggcgggcg
     2881 gcccgtgagc accgccaggt cccagcccgt ggcccggagc tcagccaggg tggcgagggg
     2941 acgttcgagg cggatggtgt cggcgtagtg cttctgcacc acggcctggg ccgagggctc
     3001 cagggcccgg atgcggcctt cgaggctggg ctccagggtg ccttcgacca ggggctggag
     3061 gtccacgtcg ccgtgcgcct ccgccagggc cagggccccg gcggtgaggc ggaagtcgtt
     3121 gttgaagccg cccaggcgct tgaaggcgcg gaaggcgccg tcggaccagg gcagggccgg
     3181 gcgcagctcc gccagggcgc gggccacggc ttccatgaag ctgcggtcgg cgtcgatgag
     3241 cacgccatcg atgtccagcg ccagcaggcg gcggcggggc cggggtgcgg gagcaggcag
     3301 cgtggcggcc aggcctgagg ccacgcgggc ggcatcggcc tccgtgccca cggtgacgcg
     3361 cgcggcatcg ctgccgggca ggcggcgcac cttcaggccc gcggcctcca gggcggcgga
     3421 aggatccggc gacaggtgca ggaagttggc ggcgctgggg gcggcgcgat ggccggtcaa
     3481 ggccccggcc aggcggtccc gccgctccgg cagggcccgc aaggccccct cgaaggccgc
     3541 ggcgaaatcc agggccacgt ccagggcctc caggctgggg gccgggatcg agtagggcag
     3601 ctgcagggtg gcgagcttgg acaccagggc cgggtcgccc accaggtagc ccaggcgcca
     3661 ggcggcggaa gccagggcct tgctgaaggt ccgcagcagc agcaggttcg ggtagcggtc
     3721 cacgaccagg cggtgggtgg cgggcgcgaa ttccgcgtag gcttcgtcca gcaccaccag
     3781 gggcggctcc gggcgggccg cggcggcggc cagcaggggc tccagcgctt ccggtggaat
     3841 ccatgcgccc gtgggattgt tcggcagggt gagccagagc tggcggcagt ccagggcggc
     3901 gaaccagggc tccaggggga agtccgtgcc ctggggcacc ggccgcaccc ggccgccatg
     3961 gcgccgcacg agcatggggt agaggctgaa gccgggatcg gggatggcca cctcgtcacc
     4021 ggcgctcagg cctgccgtgg ccaccaggtc cagcagggcg ccgctggagg gccccagcag
     4081 caggccgccc tccggggcgc ccaggcgctt ccgcaggcgc tccgtgagtt ccgcctggcg
     4141 ctcgggatag aggtggaagg gcagggcccg aagccgggcc aggagcgcct cccgggcctc
     4201 caccggccag tcggcggcgg cctcgttcat gtggagacgg cgcccggcgg acggctcggg
     4261 gggccgctga taggcgggca ggtcggcgag atcgggtcgg agaaaggtca tggcggctcg
     4321 ggatgagggt aggagaaacc caggcttcct gggagaagaa gcagggcgga gcgctcggcg
     4381 gggcggcgct ccctagggat gatggtggga gcgggcctgg gcgctgcggc cgtgatggat
     4441 gagtccctcg gcttccgcca gccgttccac ccagggggcc atggccgccg cgtccgtcgg
     4501 cgacaggcgc aggaggctct ggcgcttcag gaacgtggcc acgcccaggg ggctgctgta
     4561 gcgggcgctg cggtccgtgg gcagcacgtg gttggggccg gcgccgtagt cgccgaaggc
     4621 ctcggcgctg gcgctgccga tgaacagggc tccggcggcg gtgaggaagg gcagccaggc
     4681 ctcggcatcg cgcacgcaga gctcgaggtg ctcgggggcc caggcctggg ccagggcgat
     4741 ggcgaggtcg cggtcggcgc agaccagccg tccgtgggcg cccaggctct gttcgaggat
     4801 ggcgcggcgg ggggaggcgg cgacgcgggc ctgcagctcc gcggccacgg cttccagcag
     4861 ggtgcggtcg acgctcacca gcacggcggc agcgtcggga tcgtgttcgg cctgggcgag
     4921 caggtcctcg gccagccagg cgggatcggc gctgccgtcc gcgatcacca gcagctccgt
     4981 ggggcccgcc agggcgtcga tgccgcagac tccgatgagc tggcgtttgg cctccgccac
     5041 gaagcggttg ccggggccgg cgatgaggtc cacggcaggc tcgccatagg ccagccaccc
     5101 cagggcctgg gcgccgccga agggatacag ctccgagagg cccagctccg ccgcacaggc
     5161 cagcaccagg ggatccacgc cccaggcacc gggttgagag gtttggggca gggtgggttg
     5221 cggtttcgga ggcgtgacac ccacgatgcg ggccaccccg gccacctggg cggggatgac
     5281 ggtcatggcc agggtggaag ggtagaaggc ccggcccccg gggatgtaaa tgcccacggt
     5341 cttcagggga caccagcgct cacccacggt gccgccc
//
LOCUS       DASUDT010000151         4065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_538183, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000151 DASUDT010000000
VERSION     DASUDT010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538183"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..671
                     /gene="efp"
                     /locus_tag="VFV26_03210"
     CDS             105..671
                     /gene="efp"
                     /locus_tag="VFV26_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX4845200.1"
                     /translation="MPLILATQVRAGMIVNFENELCRVISVEHQTPGNLPARVQVKMK
                     RLKDGINRENRFGSSDKVDKASLEQHLLEFLYEDGDNLIFMNNETYEQLEVSKEILGD
                     DMVFLEPNMQVEIEFYEGQPMGATLPPSVVLEIVETDPVMKNANATGSYKPAKLDNGI
                     TVGVPPYMEAGQKIRVNTVDRTFMERVK"
     gene            853..1527
                     /locus_tag="VFV26_03215"
     CDS             853..1527
                     /locus_tag="VFV26_03215"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX4845201.1"
                     /translation="MPQAVLNLRRIEFLAGLPMNAAEELASIAELRRFPDGARVYTQG
                     DQVPGVYVVVKGGLKVFRTDGRGRVQVLQFLKVGDCVGEVPVFDGASIASSAESHGET
                     ECWLIPSAPLRQIVHRHPEVAEMLIHHFAAKVRHLVTLVETLSLHSVPERVAQLLLEA
                     HESHPMRSIVEFQETQEDLAQCIGASREAFSRALRLLTDLGLIQSTFPVVRILDLGKL
                     QRYAKG"
     gene            complement(1614..2753)
                     /locus_tag="VFV26_03220"
     CDS             complement(1614..2753)
                     /locus_tag="VFV26_03220"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEX4845202.1"
                     /translation="MAMSCDHPDLLPLDEAIARLWKALPAPCFPEVRADREDPAADLA
                     AMDGVALRSEEGSTPRRLLGTLYAGDDPAAFTVTPGTAVRIMTGAALPAGADAILPVE
                     QLREAAGTIHPQDDPRPGDHVRRRGGQAHAGDLLLPADQPLNVARTALRAWVGQPVPP
                     PSRTRVAVASTGDELVADPLPHQIRDSNGPMLAALAHALGAEAERRPALPDDPEALAA
                     ALRNPGGARILLTSGGVSMGEHDHLPRVLKDLGAGILFHKIRLKPGKPLLAAQLGDLL
                     VLALPGNPVSAYLNALLFLPVALARLEGRAQPDPWRRARLAAPVRHKGDRPLLHPCRL
                     VDGQLEPLPGKGSADLVTLAQADAFAWIEAPGEESGVKVRYLTVV"
     gene            complement(2888..>4065)
                     /locus_tag="VFV26_03225"
     CDS             complement(2888..>4065)
                     /locus_tag="VFV26_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845203.1"
                     /translation="LQDKSTPFATFAALAVLSGVGGGNFSSSMSNINGFFPKRLSGLA
                     LGLNAGIGNLGVSVMQLVVPAVMGSALFGALSGAPHLTALGKQMWVQNGALVWLPFLV
                     VLGLGSWFAMNNLPAHDSEPTSAALGKILGLHLPAFAAAGLVAWIVVRYPKLGLGAQL
                     GLVLLAIATCLALLKLIPGKVKTSLDKQFAIFRMKHTWLMTLLYIMTFGSFIGYSAAF
                     PLLLKLFFGKTVSNPATYAFLGPLVGSLIRPVGGWLSDKFRGSVITQWSTVIQIVGAL
                     AVAVVIKQAQGSPDPSHLFMPFLLSFLLLFLGSGIGNGSTFQMVPFIFEPQYAGPVLG
                     WTGAIAAYGSYVIPTVFKAQIAAGTVQYALYGFAAFYVVCLVLNGWYYARKNAEVKC"
BASE COUNT          702 a         1307 c         1464 g          592 t
ORIGIN      
        1 aggttcgaat cctggtacgc ccaccactcc aagccaaggc cctgatcgtg atcggggcct
       61 tttcttcttc caggctgtcc tctacattcc ttcgggagtc ttccatgcct ctgatcctcg
      121 ccacccaggt ccgcgccggg atgatcgtca acttcgagaa cgagctctgc cgcgtcatca
      181 gtgtcgagca ccagaccccc ggcaacctgc cggcccgggt ccaggtgaag atgaagcggc
      241 tcaaggacgg catcaaccgg gagaaccgct tcggcagctc cgacaaggtg gacaaggcca
      301 gcctcgagca gcacctgctg gagttcctct acgaggacgg ggacaacctc atcttcatga
      361 acaacgagac ctacgagcag cttgaggtca gcaaggagat cctcggcgac gacatggtct
      421 tcctggaacc gaacatgcag gtggagatcg agttctacga gggccagccc atgggtgcga
      481 ccctgccccc cagcgtggtg ctggagatcg tggaaaccga tcccgtcatg aagaatgcca
      541 acgccacggg ttcctacaag cccgccaagc tggacaacgg catcaccgtg ggcgtgcccc
      601 cctacatgga agcgggacaa aagatccgtg tgaacacggt ggatcggacg ttcatggaac
      661 gggtgaaata gccctgccca tgcccgaggc cccggtaggc agatgccgcc ggggccttgg
      721 cttgtgcgaa ttccaccgga cgaaattcca acctcgcgat aaagtgttgg tcgccccgtt
      781 cccggctgcg tgaccagaat cacaatccga tggaaatgtg cgataactga tctagtgcct
      841 tggtggagcc ccatgcctca agcagtcctc aacctgagaa ggatcgagtt cctggcgggg
      901 ctgcccatga acgccgccga ggaactggcc agcatcgccg agctgcgccg gtttcccgat
      961 ggcgcccggg tctacaccca gggggaccag gttccgggcg tgtacgtggt cgtcaagggc
     1021 ggcctcaagg tcttccgcac ggatggccgg ggccgggtgc aggtcctcca gttcctgaag
     1081 gtgggcgact gcgtgggcga ggttcccgtg ttcgacggcg cttccattgc ctccagcgcc
     1141 gagtcccacg gcgagacgga atgctggctg atcccctccg cgcccctgcg gcagattgtc
     1201 caccgccatc cggaagtggc cgagatgctc atccaccact tcgccgccaa ggtgcgccac
     1261 ctggtgaccc tggtggagac cctcagcctg cacagcgtgc ccgagcgggt ggcccagctg
     1321 ctgctggagg cccacgaatc ccaccccatg cggtccatcg tggagttcca ggagacccag
     1381 gaggacctgg cccagtgcat cggcgccagc cgcgaggcct tcagccgcgc cctgcgcctt
     1441 ctgacggacc tgggcctcat ccagagcacc ttcccggtgg tgcgcatcct ggatctgggg
     1501 aagctgcagc ggtacgcgaa gggttgagcc cggctccaaa aacgctgcgc gtttttggag
     1561 tagaaaaaag ctcttcttca actcccaatc gccgcaggcg attgggagcg aggctacacg
     1621 accgtgaggt agcggacctt gactccggac tcttcgccgg gggcctcaat ccacgcgaag
     1681 gcgtcggcct gggccagggt gacgaggtcg gcggagccct tgccgggcag gggctccagc
     1741 tggccgtcca ccaggcggca ggggtgcagc aggggacggt cgcctttgtg cctcacgggg
     1801 gcggccaggc gggcgcgccg ccagggatcg ggttgggcgc ggccctccag ccgggcgagg
     1861 gccacgggca ggaacagcag ggcgttgagg taggcggaca cggggttgcc cggcagggcc
     1921 agcaccagca ggtcccccag ctgggccgcc agcaggggct tgccgggctt gaggcggatc
     1981 ttgtggaaga ggatgcccgc gccgaggtcc ttcagcaccc ggggcaggtg gtcgtgctcg
     2041 cccatgctca cgccgccgga ggtcagcagg atgcgggcgc cgccgggatt ccggagggcc
     2101 gccgccaggg cctcggggtc gtccggcagg gcggggcgcc gctcggcctc ggcccccagg
     2161 gcgtgggcca gggccgccag catggggccg ttggaatccc ggatctggtg cggcagagga
     2221 tcggccacca gctcatcgcc cgtggaagcc acggccacgc gggtgcggga aggcggcggc
     2281 accggctggc ccacccaggc ccgcagggcc gtgcgggcca cgttgagggg ctgatccgca
     2341 ggcagcagca gatcccccgc atgggcctgc ccgccgcgcc ggcgcacatg gtcgccgggg
     2401 cgcggatcgt cctggggatg gatggttccg gcggcctccc gcagctgctc cacgggcagg
     2461 atggcgtccg cccccgcggg gagggccgcg ccggtcatga tgcgcacggc ggtgccgggc
     2521 gtcacggtga aggccgccgg gtcatccccg gcgtagaggg ttcccagcag gcggcgaggg
     2581 gtgctcccct cctccgagcg cagcgccacg ccgtccatgg ccgccaggtc ggcggcggga
     2641 tcctcccggt cggcccggac ctcggggaag cagggcgcgg gcagggcctt ccagaggcgg
     2701 gcgatggcct cgtccagggg cagcaggtcg ggatggtcgc agctcatggc catgggcgaa
     2761 ggataccgcc acggtgcgag caggcgtgat acctgagctt tgctcaggca tcacgcgggg
     2821 gtcaaagggg ggacgcagag cgaagccctg gcgagcgggc ggtcccccct ttcatggcag
     2881 cgggctgtca gcacttcacc tcggcgttct tccgggcgta gtaccacccg ttgaggacga
     2941 ggcacaccac atagaaggcc gcgaacccgt agagcgcgta ctgcacggtg cccgcggcga
     3001 tctgggcctt gaagaccgtg gggatgacgt agctgccgta ggcggcgatg gcgccggtcc
     3061 agcccagcac gggcccggcg tactggggct cgaagatgaa gggcaccatc tggaaggtgc
     3121 tgccgttgcc gatgcccgag cccaggaaga gcagcaggaa gctgagcagg aacggcatga
     3181 agaggtgcga ggggtccggg ctgccctggg cctgcttgat gaccacggcc accgccaggg
     3241 cgcccacgat ctggatcacc gtggaccact gggtgatgac ggaaccccgg aacttgtctg
     3301 agagccagcc ccccacgggc cggatgaggc tgcccaccag gggccccagg aaggcgtagg
     3361 tggcgggatt gctcacggtc ttgccgaaga acagcttgag cagcaggggg aaggcggcgg
     3421 aatacccgat gaagctgccg aaggtcatga tgtagagcag ggtcatgagc caggtgtgct
     3481 tcatgcggaa gatggcgaac tgcttgtcga ggctcgtctt caccttgccg gggatcagct
     3541 tgagcagggc caggcaggtg gcgatggcca gcagcacgag gcccagctgg gcgcccagcc
     3601 cgagcttggg atagcgcacc acgatccagg ccacgagccc ggcggcggcg aaggcgggca
     3661 ggtgcaggcc caggatcttg cccagggccg cggaggtggg ctcgctgtcg tgggccggca
     3721 ggttgttcat ggcgaaccag gatccgaggc ccagcaccac caggaagggc agccacacga
     3781 gggcgccgtt ctgcacccac atctgcttcc cgagggccgt gaggtgtggt gcgccggaga
     3841 gggcgccgaa gagggccgag cccatcactg cgggcaccac cagctgcatg acgctcacgc
     3901 ccaggttgcc gatgcccgcg ttgaggccca gggccaggcc cgagaggcgc ttggggaaga
     3961 acccgttgat gttggacatg gaggaggaga agttgccgcc gcccacgccg gagagcacgg
     4021 ccagggccgc gaaggtggcg aagggggtgc tcttgtcctg cagcg
//
LOCUS       DASUDT010000152         3611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2040399, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000152 DASUDT010000000
VERSION     DASUDT010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040399"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VFV26_03230"
     CDS             <1..474
                     /locus_tag="VFV26_03230"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX4845204.1"
                     /translation="AAAKAGWGRKLPAGRGLGLACHAYDGRTSAAAVAEVSVAPGQLR
                     VHRITCAVDCGLVVNPAGLEAQVEGGLAFGLSALFSQITWEKGRTVQTGFHDFPVLRL
                     ADMPAIETHVVPSAEAPSGMGEPPVPLAIPAVLNAVFAATGRRIRQVPLGPDSFK"
     gene            471..1442
                     /locus_tag="VFV26_03235"
     CDS             471..1442
                     /locus_tag="VFV26_03235"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC/CoxI family protein"
                     /protein_id="HEX4845205.1"
                     /translation="MKELQDIFRLIRERPGPLALATLVRVEGASYRRPGARLLLDREG
                     PLRGSLSGGCLEGDVHARAMEVLAAGAPRLVQYDLRGDADLIWGSGSGCEGLLEILIE
                     PLDGCPGWMAWVEQSWILRSPLTLHTDLAPGQVGRRSIHSQPDAPSCLFTETFAPPPA
                     LWILGASDDSRPLVRMAKELGWFAGVLDHRPAFATAARFPEADAVRAGHPAQVLPGLP
                     LDARSAVVLMTHHYAKDLEALRLLLPSPAGYLGLMGSRARGAKLLGELAAEGLQADAR
                     LHTPVGLDLGAADPGGIALSILAEIQACLHQRQGQPLRASAAAITPP"
     gene            1439..2005
                     /locus_tag="VFV26_03240"
     CDS             1439..2005
                     /locus_tag="VFV26_03240"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX4845206.1"
                     /translation="MKPPRTAAIILAAGSGRRMGGPKALLRVEGDTLLRRAARAALEA
                     GCAPVVAVVGAWPPDLDGLDVQAVPNPGAEEGMASSLRLGLAALPPDAPAVLVLAVDQ
                     PAVDAVLLHGLLALAARDPERPAACAYAGTIGIPAVLPRRLFPDLLALRGDRGAKAIL
                     LREDAAPLPFPGGEKDLDTPEDLDGIRR"
     gene            complement(2088..2486)
                     /locus_tag="VFV26_03245"
     CDS             complement(2088..2486)
                     /locus_tag="VFV26_03245"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4845207.1"
                     /translation="MVRKACTLEPNVLSAQCPTRQALDLIADKWTTLLIYLLSKGKQR
                     YGDLHRQVGGISQKMLTQTLRKLERDGLVSRHVYPEVPPRTEYELTKLGHTLIGPLGA
                     LCEWAGTHLSELEQARKRYDHLQKKSVLSA"
     gene            2592..3140
                     /locus_tag="VFV26_03250"
     CDS             2592..3140
                     /locus_tag="VFV26_03250"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEX4845208.1"
                     /translation="MSQISIVFHSGYGHTKVVADRVKAGADSVPGTQTRLIPVEEIDA
                     HWADLEASDAIVFGSPTYMGNVSGPFKTFMDASSKPWLEQKWKDKLAGGFTISGSPSG
                     DKLNTLQSLMIFGMQHGMIWVGNAEMPYNEEGINRLGSMTGVMAQAGQVSPDVEPNEA
                     DRKTAERFGHRIASATARWGKV"
     gene            3230..3550
                     /gene="trxA"
                     /locus_tag="VFV26_03255"
     CDS             3230..3550
                     /gene="trxA"
                     /locus_tag="VFV26_03255"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX4845209.1"
                     /translation="MSDLIQHLTDKTFSEAVARGITVVDFWAPWCAPCRDLAPITEAL
                     AEEFKGRATFAKLNVDDFTPLSEQYDVLSMPTLVIFKDGKPQDRIVGALPIDQLRARI
                     QQAL"
BASE COUNT          544 a         1325 c         1191 g          551 t
ORIGIN      
        1 gccgccgcca aggccggatg gggccgcaag ctccctgcgg gccgcggcct ggggctcgcc
       61 tgccacgcct atgatggccg tacctccgcc gcggccgtgg cggaggtctc cgtggccccg
      121 ggccagctcc gcgtccacag gatcacctgc gccgtggact gcggcctcgt ggtgaatccc
      181 gcgggcctgg aagcccaggt ggagggcggc ctcgccttcg ggctgtcggc cctgttctcc
      241 cagatcacct gggagaaggg ccgcacggtg cagacgggtt tccacgactt ccccgtgctt
      301 cgcctcgcgg acatgcccgc catcgagacc cacgtggtcc ccagcgccga ggccccctcg
      361 ggcatgggcg agccccccgt gcccctggcc atccccgccg tgctgaatgc cgtcttcgcc
      421 gccacgggca ggcgcatccg gcaggtgccg ctgggtccag attccttcaa gtgaaagagc
      481 tccaggacat cttccgtctc atccgcgagc gcccgggccc cctggccctg gcgaccctgg
      541 tgcgcgtcga gggcgccagc taccggcggc ccggcgcccg gctgctgctg gaccgggagg
      601 ggcccctgcg gggctccctc agcggtggct gcctggaagg cgatgtccac gcgagggcca
      661 tggaagtcct ggccgccggc gccccgcgcc tggtgcagta cgacctgcgc ggcgacgccg
      721 acctcatctg gggcagcggc agcggctgcg aagggctgct ggagatcctg atcgaacccc
      781 tcgacggttg ccccggatgg atggcctggg ttgaacaatc ctggatcttg cgatcccccc
      841 ttaccctcca cacggacctt gcccccgggc aggtggggcg gcgcagcatc cactcccagc
      901 cggacgcccc ctcctgcctt ttcaccgaaa ccttcgcgcc gcccccggcc ctctggatcc
      961 tgggggccag cgacgacagc cggcccctgg tccgcatggc caaggagctg ggctggttcg
     1021 cgggcgtcct cgaccatcgt cccgccttcg ccacggcagc gcgcttcccc gaggcggatg
     1081 cggtgcgcgc gggtcacccg gcccaggtcc tgccgggcct tcccctcgac gcccgcagcg
     1141 ctgtggtgct catgactcac cactacgcca aggatctgga agccctgcgc ctgctgctgc
     1201 cttcacccgc aggctacctg ggcctcatgg gcagccgggc ccggggggcg aagctgctgg
     1261 gggaactcgc cgcggaaggc ctccaggccg atgcgcggct ccacacgccc gtgggactgg
     1321 atctcggcgc ggccgacccg gggggcatcg ccctttcgat cctggcggag atccaggcct
     1381 gcctccacca gcgccaaggc cagcccctgc gcgccagcgc cgcggccatc acgcccccat
     1441 gaagcccccg cggaccgctg ccatcatcct cgccgcgggc tcgggacgcc gcatgggcgg
     1501 ccccaaggcc ctgctgaggg tcgaaggaga caccctgctg cgccgcgccg cgcgggcggc
     1561 cctggaggcg ggctgcgcgc ccgtggtggc cgtggtcggt gcctggccgc cggaccttga
     1621 tgggctggac gtccaggccg tccccaatcc cggagccgag gaaggcatgg ccagctccct
     1681 ccgcctgggc ctcgccgccc tgcctccaga cgcaccggca gtgttggttc tggcggtgga
     1741 ccagcccgcc gtggatgcgg tcctgctgca cggcctgctg gcattggccg cccgggatcc
     1801 ggaacgcccg gcggcctgcg cctatgcggg cacgatcggc atccccgccg tgctgccccg
     1861 gcgcctgttc cccgacctcc tggccctgcg cggcgaccgt ggcgccaagg ccatcctcct
     1921 gcgggaggac gccgcccccc tgcctttccc gggcggcgag aaggatctgg acacgccgga
     1981 ggacctggac ggaatcaggc gctgaggacg ggccccgccc ggccgaagcg cgggggcccc
     2041 ggggggacat cgcgagccgc gcgagcaggc ggtccccccg gacaatatca ggcgctgagg
     2101 acggacttct tctgcaggtg gtcgtagcgc ttgcgggcct gctccagctc ggacaggtgc
     2161 gtgcccgccc actcgcagag ggcgcccagg ggcccgatga gcgtgtgccc cagcttggtc
     2221 agctcgtact ccgtgcgggg cggcacctcg ggatagacgt gccgcgagac caggccgtcc
     2281 cgctccagct tgcgcagggt ctgggtgagc atcttctggc tgatgccgcc cacctgccgg
     2341 tgcaggtcgc cgtagcgctg cttccccttc gacagcaggt agatcagcag ggttgtccac
     2401 ttgtcggcga tgaggtccag ggcctggcgc gtggggcact gggcgctgag gacgttgggt
     2461 tccagggtgc acgctttgcg aaccattggg tgcctacctt ccaaattagt gcctactttc
     2521 tttttgatcg taagcaccta aagtttgggc cacgggccaa gtgaatgcaa gagcccgaaa
     2581 aggagccagg catgtcccag atttccatcg tgttccacag cggctacggc cacaccaagg
     2641 tggtggcgga tcgggtgaag gccggcgccg attccgtgcc cggcacccag actcgcctca
     2701 ttcccgtcga ggagatcgac gcccactggg cggatctgga ggcctcggac gccatcgtct
     2761 tcggcagccc cacctacatg ggcaacgtca gcggcccctt caagaccttc atggacgcca
     2821 gctccaagcc ctggctggaa cagaagtgga aggacaagct ggccgggggc ttcaccatca
     2881 gcggcagccc cagcggcgac aagctgaaca ccctccagtc cctgatgatc ttcggcatgc
     2941 agcacggcat gatctgggtg ggcaacgcgg agatgcccta caacgaggag ggcatcaacc
     3001 ggctcggcag catgaccggc gtcatggccc aggccggcca ggtttcccca gacgtcgaac
     3061 ccaacgaagc ggatcgcaag accgcggaac ggttcggcca tcgcatcgcc agcgccacgg
     3121 cccgctgggg caaggtttaa cgacctaacc atccttgaac caagaaaata tctttcaaaa
     3181 gaatcaatcc agatccgcta atctggaggg ctgaaacagg agccccggca tgtccgacct
     3241 catccagcac ctgaccgaca agaccttttc cgaggccgtt gcccgtggca tcacggtggt
     3301 ggatttctgg gctccctggt gcgccccctg ccgcgacctg gcccccatca ccgaggccct
     3361 ggccgaggag ttcaagggcc gggccacgtt cgccaagctg aacgtggacg atttcacgcc
     3421 cctctccgag cagtacgacg tcctgagcat gcccaccctg gtgatcttca aggacggcaa
     3481 gccccaggac cgcatcgtgg gcgccctgcc cattgaccag ctgcgggccc gcatccagca
     3541 ggccctctga ccctgaaact ctctccgaaa tccgaggcat ccatgagcac catcacgggc
     3601 gaaagcctgc t
//
LOCUS       DASUDT010000153         3859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1222856, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000153 DASUDT010000000
VERSION     DASUDT010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1222856"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VFV26_03260"
     CDS             <1..715
                     /locus_tag="VFV26_03260"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845210.1"
                     /translation="SPAFAQAALYVGDAYFAQKRMEDAIPWFRKAAELNPADPRAWRY
                     LADAQKSLGRKQEAEATMIETIKVFPGNRASWQPLAWHRSAEGHPMTRLAFRPGVRIG
                     WNEDGAQTLSLSDSPADAQAQSIWMLLAGAILDRISVDGGSGGGKDTPPLKTRFQQER
                     FFWELGLKAYAEGCQKAGTEPKDRILRQFLTFQKEGQLDAAIFLLRYREAFRPDYDAW
                     LKANPGAVEAFLKRYNMRP"
     gene            complement(779..>3859)
                     /gene="carB"
                     /locus_tag="VFV26_03265"
     CDS             complement(779..>3859)
                     /gene="carB"
                     /locus_tag="VFV26_03265"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX4845211.1"
                     /translation="LLNSNPASIMTDPGRADATYIEPLTLSVLEKVIEAEQPDAILPT
                     VGGQTALNLAMEAHESGLLERTGVMLIGAQPEAINRGEDRQLFKALMDNLGLETCRGG
                     FAHNMAEARDLLKLTGFPAIIRPSFTLGGSGGGIAYNVEEFETIVARGLDLSPTKQVL
                     IEESILGWKEFELEVVRDLDDNVEVICSIENFDPMGVHTGDSITVAPALTLTDPEYQK
                     MRDAALAVIRAVGVETGGSNIQFALEPETSRIIVIEMNPRVSRSSALASKATGFPIAW
                     VATKLALGYRLWELPNAITRMTKAAFEPVLDYIVVKIPRFTFEKFPQAEKVLGTQMKS
                     VGEVMSLGRSFQEALQKAVRSLEEGHKGISGALEGKLDLNRLKEHLLIPGPQRIFWIY
                     HALKAGHSVEELHRLTKITAWFLREIEEIVVLEGRLRSFPVDRLPEELLEKAKRAGFA
                     DDQISVFCSGTEAEVAARRAELGLQPTYKRVDTCAGEFQAETPYLYGTWEYGDTSEAP
                     PTDRPKAIVLGSGPNRIGQGVEFDCCCVQAVEAIRASGVEAILVNCNPETVSTDFDTS
                     DRLYFEPLTYEHVKAVVDREAAGGKLLGVFAQFGGQTPLKLAGPLHEAGVPLLGTPLS
                     AILDAEDRERFGQALKRLDIPAPQWGMATSLAQARDVAQRLSYPVMVRPSFVLGGRAM
                     AVVFDDAGLEKYMREAVAVSNDQPILLDRFLDGAQELDIDVVCDGEDVAIAGLLAHIE
                     EAGIHSGDSYAVIPALGVPQDILETVKGYARKLALDLGVRGLMNLQFAVKDGIAYCLE
                     ANPRASRTVPFVSKATGVDWAGVAARIGLGQSLKQQGIADGVPRAVSVKGVVFPFAKF
                     PGVDPVLGPEMKSTGEVMGIGETFGEAYAKALLAAGIPLPLSGTVFLTVNDADKARLP
                     ELAQKLVALGFGLCATEGTARTLESVGLKVRKIFKVNEGRPNAVDLLKNGEVQWVINT
                     PLGRDAFFDESAIRREALRLKIPCLTNLSAALAACEAVETLRGEMKVRAIQTLG"
BASE COUNT          601 a         1307 c         1302 g          649 t
ORIGIN      
        1 gagcccggcc tttgcccagg cggcactcta tgtgggggat gcctacttcg cgcagaagcg
       61 gatggaggat gccattccgt ggttccgaaa ggcagcggag ctgaatcctg ctgacccccg
      121 cgcctggcgc tacctcgcag acgcccagaa gtctctcggg cgaaaacagg aggcagaggc
      181 aaccatgatc gagaccatca aggtcttccc tggcaaccgc gccagctggc agcccctcgc
      241 ctggcaccgc agcgctgagg gacaccccat gacgcgccta gccttcaggc ctggcgtcag
      301 gatcggatgg aacgaggacg gggctcagac cctgagcctc agcgattccc ccgcggacgc
      361 ccaggcccaa tccatctgga tgctcctggc cggcgccatt ctcgacagga tcagcgtgga
      421 tggcggttct ggtggaggca aagacactcc gcccctcaag acccggttcc agcaggagcg
      481 attcttctgg gaactaggcc tgaaggccta tgccgagggg tgccaaaaag ccgggaccga
      541 gccgaaagac cgaatcctcc gccagttcct tacctttcag aaagagggtc aactcgatgc
      601 agccatcttc ttgctgcgct accgcgaggc cttccggcct gattacgatg catggctgaa
      661 agccaatcct ggggctgtgg aagctttcct gaaacgctac aacatgcgcc cttaaagcac
      721 ctcacctgat cgagtcggga gaatctcggc cggccccatc aggtgacgcg ggcaggaatc
      781 accccagcgt ctggatggcc cgcaccttca tctcgccccg cagggtttcc acggcttcgc
      841 aggcggcgag ggccgcgctg aggttggtga ggcaggggat cttcaggcgc agggcctcgc
      901 ggcggatggc gctttcgtcg aagaaggcgt cgcggcccag gggcgtgttg atgacccact
      961 gcacctcgcc gttcttcagg aggtccacgg cgttggggcg gccctcgttc accttgaaga
     1021 tcttgcgcac cttgaggccc acggactcca gcgtgcgggc ggtgccctcc gtggcgcaga
     1081 ggccgaagcc cagggccacc agcttctggg ccagctccgg caggcgggcc ttgtccgcgt
     1141 cgttcacggt gaggaacacc gtgcccgaca gcggtagggg gatgcccgcg gccagcaggg
     1201 ccttggcgta ggcctcgccg aaggtctcgc cgatgcccat gacctcgccc gtgctcttca
     1261 tctcggggcc cagcaccggg tccacgccgg ggaacttggc gaagggaaat acgacgccct
     1321 tcaccgacac ggcccggggc acgccatccg cgatgccctg ctgcttcagg ctctggccca
     1381 ggccgatgcg ggcggccacg cccgcccagt ccacgcccgt ggccttgctc acgaagggca
     1441 ctgtgcggct ggcccgggga ttggcctcca ggcagtaggc gatgccgtcc tttacggcga
     1501 actgcaggtt catgaggccg cgcacgccca ggtccagggc cagcttccgg gcgtagccct
     1561 tcacggtctc caggatgtcc tggggcacgc ccagggccgg gatcaccgcg tagctgtcgc
     1621 cgctgtggat gcccgcctcc tcgatgtggg ccagcaggcc cgcgatggcc acgtcctcgc
     1681 catcgcagac cacgtcgatg tccagctcct gggcgccgtc caggaagcgg tccagcagga
     1741 tgggctggtc gttgctcacg gccacggcct cccgcatgta tttctccagg cccgcgtcgt
     1801 cgaagaccac ggccatggcc cggccgccca gcacgaagct ggggcgcacc atcaccgggt
     1861 aggacaggcg ctgggccacg tcccgggcct gcgccaggct ggtggccatg ccccactggg
     1921 gggcggggat gtccaggcgc ttgagggcct ggccgaagcg ttcgcgatcc tcggcgtcca
     1981 ggatggcgct gagcggcgtg cccagcagcg gcacgccagc ttcatgcagg ggtcccgcca
     2041 gcttgagggg cgtctgcccg ccgaactggg cgaagacgcc cagcagcttg ccgcccgcag
     2101 cctcgcgatc caccaccgcc ttcacatgct cgtaggtgag gggctcgaag tagaggcggt
     2161 cgctggtgtc gaagtccgtg ctgacggtct cggggttgca gttgacgagg atggcctcca
     2221 cgccgctggc acggatggcc tccacggcct gcacgcagca gcagtcgaac tccacgccct
     2281 ggccgatgcg gttggggccc gatccgagga cgatggcctt gggacggtcc gtgggcgggg
     2341 cttcgctggt atcgccatat tcccaggtgc catagaggta gggggtctcg gcctggaact
     2401 cgccggcgca ggtatccacc cgcttgtagg tgggctgcag gcccagctcg gcgcgccgcg
     2461 cggcgacttc cgcctccgtc cccgagcaga acaccgagat ctggtcgtcc gcgaacccgg
     2521 cccgcttggc cttctccagc agctcctccg gcaggcggtc cacggggaag ctccgcaggc
     2581 ggccttccag cacgacgatc tcttcgatct cacgcaggaa ccaggccgtg atcttcgtga
     2641 gacggtgcag ctcctccacg ctgtggccgg ccttcagcgc gtggtagatc cagaagatgc
     2701 gctggggccc ggggatgagc aggtgctcct tgaggcggtt caggtccagc ttcccttcca
     2761 gcgcgccgga aatgcccttg tggccctcct ccagggagcg cacggccttc tgcagggcct
     2821 cctggaagct gcggcccagg ctcatgacct cgcccacgct cttcatctgc gtgcccagca
     2881 ccttctcggc ctgggggaac ttctcgaaag tgaagcgggg gatcttcacc acgatgtagt
     2941 ccagcaccgg ctcgaaggcg gccttggtca tgcgggtgat ggcgttcggc agctcccaaa
     3001 ggcggtagcc cagcgccagc ttggtggcca cccaggcgat ggggaagccc gtggccttcg
     3061 aggccagcgc ggagctgcgg ctcacgcggg ggttcatctc gatgacgatg atgcggctgg
     3121 tctcgggctc cagggcgaac tggatgttcg atccgcccgt ctccacgccc acggcgcgga
     3181 tgacggccag cgcggcgtcg cgcatcttct ggtactcggg atccgtgagc gtgagcgccg
     3241 gagccaccgt gatgctgtcg ccggtatgga cgcccatggg atcgaagttc tcgatggagc
     3301 agatcacctc gacgttgtcg tccaggtcgc gcaccacctc cagctcgaat tccttccagc
     3361 ccaggatgct ctcctcgatg agcacctgct tggtggggct caggtccagg ccccgggcca
     3421 cgatggtctc gaactcctcc acgttgtagg cgatgccgcc gccgctgccg ccgagtgtga
     3481 agctgggccg gatgatggcg ggaaagcccg tgagcttgag caggtcgcgg gcctcggcca
     3541 tgttgtgggc gaagccgccg cggcaggtct ccaggcccag gttgtccatg agggccttga
     3601 agagctggcg gtcctcgccg cggttgatgg cctccggctg ggcgccgatg agcatcaccc
     3661 ccgtgcgctc cagcaggcca ctctcgtggg cctccatggc gaggttcagc gccgtctggc
     3721 cgcccacggt gggcaggatg gcatcgggct gctcggcctc gatgaccttc tccagcacgc
     3781 tcagcgtcag cggttcgatg taggtggcgt ccgcccggcc cgggtccgtc atgatcgacg
     3841 ccggattcga gttgagaag
//
LOCUS       DASUDT010000154         2285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_405597, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000154 DASUDT010000000
VERSION     DASUDT010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405597"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1265)
                     /locus_tag="VFV26_03270"
     CDS             complement(<1..1265)
                     /locus_tag="VFV26_03270"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF004490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HEX4845212.1"
                     /translation="MRMYDLIYTKKLGGALSPEQIAFWVKGAADGSIPDEQSASLLMA
                     TCWRGMTTDETLALTLAMRDSGKRMDLSSVPGIKVDKHSTGGVGDKTTLILGPIVAAC
                     GVPCPMFSGRGLGHTGGTVDKFAAIPGLKVELTDDEFLHSLKETRFANSAPTGNIAPA
                     DKKLYALRDITATVESIPLITASIMSKKLAGGADALVLDVKCGPTAFMKTLEDATTLA
                     QSMVDVGTAHGMQIRALITRMDAPLGWAIGNALEVMESVEILRGEHADSELARMSFRL
                     AAEMLIMGGAATTLEAAEAKVAASIQDGSALDALRRFVALNGGDAEALDDFSRLPQAG
                     QVVDVRADRGGYITAIDGRALGLLAMDLGAGRKDRHDVLDLGVGIRVRATVGQKVAVD
                     DLLFTVHAKAGARVKADAFLATLTLEPAPP"
     gene            complement(1291..1971)
                     /locus_tag="VFV26_03275"
     CDS             complement(1291..1971)
                     /locus_tag="VFV26_03275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845213.1"
                     /translation="MARPTKDREIQVQKPAQSLAHFQTKLGQGEEADGGLLKPILIGV
                     ASVVLLGVAYGAWGAFRTQAAEKHEAALSALQMEVEGDGITPLPPAEVEKRMRERLGR
                     LEALVSQAPSSRKAATAGLLATWRLALDGKVQTADSAEDAWGHIRLAQRALAMGQGAA
                     ARAQLDPLRAKATPGEPWAEAFWASQLDADRLTGDRAQALKDLAEYKARFKGRSDTKT
                     FDGLIQSI"
     gene            2077..2152
                     /locus_tag="VFV26_03280"
     tRNA            2077..2152
                     /locus_tag="VFV26_03280"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2110..2112,aa:Phe,seq:gaa)
BASE COUNT          335 a          742 c          811 g          397 t
ORIGIN      
        1 ggcggggctg gttcgagggt gagggtggcc aggaaggcgt cggccttcac cctggccccg
       61 gccttggcat gcacggtgaa caggagatcg tccacggcga ccttctgtcc cacggtggcc
      121 cggacgcgga tccccacgcc cagatccagc acgtcgtgcc ggtccttgcg cccggccccc
      181 agatccatgg cgagaaggcc cagggcgcgg ccatcgatgg cggtgatgta gccgccgcgg
      241 tcggcgcgca cgtcgaccac ctggcccgcc tggggcaggc ggctgaaatc gtccagggcc
      301 tcggcatcgc cgccattgag ggccacgaag cgccgcaggg cgtccagggc agagccatcc
      361 tggatgctgg cggcgacctt ggcctcggcg gcttccagtg tggtggccgc gccgcccatg
      421 atcagcatct cggcggcgag gcggaagctc atccgggcca gctcggaatc cgcatgctcg
      481 ccgcggagga tctcgacgga ctccatgacc tccagcgcat tgccgatggc ccagcccagg
      541 ggcgcgtcca tgcgggtgat gagggcccgg atctgcatgc cgtgggccgt gcccacgtcc
      601 accatgctct gggccagggt ggtggcgtcc tccagggtct tcatgaaggc cgtggggccg
      661 cacttcacgt ccagcaccag ggcgtcggcg cctccagcca gcttcttgga catgatgctg
      721 gcggtgatga gggggatgct ttccacggtg gcggtgatgt cgcgcagggc gtagagcttc
      781 ttgtccgccg gggcgatgtt gcccgtgggg gcggaattgg cgaagcgggt ctccttcagg
      841 ctgtggagga actcgtcatc ggtgagctcg accttgagac ccgggatggc ggcgaacttg
      901 tccacggtgc cgccggtatg gcccaggccg cgcccgctga acatggggca gggcacgccg
      961 caggcggcca cgatggggcc gaggatgagg gtggtcttgt cgcccacgcc accggtgctg
     1021 tgcttatcga ccttgatgcc tggcacggag gacagatcca tccgcttgcc ggaatcccgc
     1081 atggccagcg tgagggccag ggtctcgtcc gtggtcatgc cgcgccagca ggtggccatg
     1141 agcagcgaag cgctctgctc gtcggggatg gaaccatcgg cggcgccctt cacccagaac
     1201 gcgatctgct cgggcgacag ggcgccgccc agcttcttcg tgtagatcag gtcgtacatc
     1261 cgcatgggat ggttccttag tctatggggc tcagatgctc tggatcaggc catcgaaggt
     1321 cttggtgtcg ctgcggccct tgaagcgcgc cttgtactcc gccaggtcct tcagcgcctg
     1381 ggcgcggtcc ccggtgagcc ggtcggcatc cagctggctg gcccagaagg cctcggccca
     1441 gggctcgccc ggcgtggcct tggcgcgcag ggggtccagc tgggcgcggg cggcagcgcc
     1501 ctgtcccatg gccagggccc gctgggccag gcggatatgg ccccaggcat cctcggctga
     1561 atccgctgtc tggaccttgc cgtccagggc cagacgccat gtggcgagca ggccggcagt
     1621 ggcggccttg cgggaggaag gggcctggga gaccagggct tccaggcggc ccaggcgttc
     1681 gcgcatgcgc ttttccactt cggctggggg cagtggcgtg atcccgtcgc cctcgacctc
     1741 catctgcagg gccgacaggg ccgcctcgtg cttttcggcg gcctgggtcc ggaaggcgcc
     1801 ccaggcgccg taggccacac ccagcagaac cactgaggcc accccgatga ggatgggctt
     1861 gagcagcccg ccgtctgctt cctcaccctg gcccagcttg gtctggaagt gcgccaggct
     1921 ctgggccggc ttctggacct ggatttcgcg atctttggtg gggcgggcca tggcaaacct
     1981 cttgaacgaa gcatcactcg aaccatagag gatgcaccaa tcccttcgtt ctcggcactt
     2041 gaaaatgcga tcccgcctga tatcctggac cttcctgcct gggtagctca gttggtagag
     2101 caatggattg aaaatccatg tgtcggcggt tcgattccgt ctccaggcac caaaacaaag
     2161 gcccccgcac gggggccttt gttttggaga gacgggatcg gagtcacagg gcggttgggc
     2221 tgcgttttga cctcgccgga cgcatgcgtc cggcgaggga agcggcccta acgcccgtgc
     2281 ggccc
//
LOCUS       DASUDT010000155         2342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1090511, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000155 DASUDT010000000
VERSION     DASUDT010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1090511"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /gene="aspS"
                     /locus_tag="VFV26_03285"
     CDS             complement(<1..1175)
                     /gene="aspS"
                     /locus_tag="VFV26_03285"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEX4845214.1"
                     /translation="MKLDRLGDFQRTHRNGDLRLDHAGQTVRLLGWCRRVRNLGSLVF
                     LDLRDRWGLVQLVANEETADPELLAKLKAVRSEFVLAAEGVVAERESKNPNMATGDIE
                     IRLTGLRILNTAAPLPFPLEDEGVGEDLRLTYRFLDLRREQLQRNMILRSEVANLTRN
                     HFRELDFIEFETPILTKSTPEGARDYLVPSRVHAGEFFALPQSPQLFKQLLQVSGFER
                     YVQICRCFRDEDLRADRQPEFTQVDVEMSFVRQEDVQGVIEPLMVKLAQVVGKDVSAP
                     FPRLPYRDAMEWYGSDKPDLRCGVKIQDATPLFAESAFNLFRAAADSQGQRRVRALFF
                     PGEAAGSLSRKQLDALQEQAKQMGAGGLPYAKWGKDGLSSSFKKFLEPADEAALRQRL
                     "
     gene            complement(1370..>2342)
                     /locus_tag="VFV26_03290"
     CDS             complement(1370..>2342)
                     /locus_tag="VFV26_03290"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4845215.1"
                     /translation="RATASRLGVRPQAIDAALYDAFGQRFVSTIYTPLNQYHVVMEVD
                     SPFMGTPDGLRHIYVRSNTGSLVPLSAFTRLERRNTALSVNHQGQLPSVTLSFNLPVG
                     VALGDAVAAVDRAEQEIHLPGTLRGSYMGTAQAFKASLANQPLLLLAALLVVYVVLGM
                     LYESLIHPLTIISTLPSAGVGALLALLAFRTELSVIAFIGIILLIGIVKKNAILMIDF
                     AIEVERREGVTPEKAIFQACLLRFRPITMTTLAALLGGLPLAIGMGTGSELRQPLGIA
                     IVGGLLFSQLLTLYTTPVIYLYMDRFRLRWARYRKRKAGLVETPMQG"
BASE COUNT          376 a          718 c          870 g          378 t
ORIGIN      
        1 agacgctgcc ggagggcggc ttcatccgcg ggttcgagga acttcttgaa gctgctggag
       61 agcccgtcct tgccccactt ggcgtagggg aggccgccgg cgcccatctg cttggcctgc
      121 tcctggaggg cgtccagctg cttgcggctg agggatcccg ccgcttcgcc cgggaagaag
      181 agggcccgca cccggcgctg gccctggctg tcggcggccg cgcggaagag gttgaaggcg
      241 ctctccgcga agagcggggt ggcgtcctgg atcttcacgc cgcagcggag gtcgggcttg
      301 tcggagccgt accattccat ggcgtcccgg tagggcaggc gggggaaggg ggcgctgacg
      361 tccttgccga ccacctgggc cagcttgacc atgaggggtt cgatgacgcc ctgcacgtcc
      421 tcctggcgca cgaagctcat ctccacgtcc acctgggtga actcgggctg gcggtcggcg
      481 cgcagatcct cgtcgcgaaa gcagcggcag atctgcacgt agcgctcgaa gccgctcacc
      541 tgcagcagct gtttgaagag ctgggggctc tggggcaggg cgaagaactc gccggcgtgc
      601 acgcggctgg gcaccaggta gtcccgggcg ccttcgggcg tggacttggt gaggatggga
      661 gtctcgaact cgatgaaatc cagctcgcgg aagtggttcc gggtgaggtt cgccacctcg
      721 ctgcgcagga tcatgttccg ctggagctgc tcgcggcgca ggtccaggaa ccggtaggtg
      781 aggcgcaggt cctcgcccac cccctcgtcc tccaggggaa aaggcagggg ggcggcggtg
      841 ttgaggatcc tcaggcccgt gaggcggatc tcgatgtccc ccgtggccat gttcgggttc
      901 ttgctctcgc gttcggccac cacgccctcg gcggccagca cgaactcgct gcgcacggcc
      961 ttgagcttgg ccagcagctc gggatcggcg gtctcctcgt tggccaccag ctgcaccagg
     1021 ccccagcggt cccgcagatc caggaacacg agcgagccca ggttgcgcac ccggcggcac
     1081 cagcccagca ggcgcacggt ctggcccgcg tggtcgaggc gcaggtcgcc gttgcggtgg
     1141 gtgcgttgga agtcgccgag ccggtcgagt ttcatagccc tacaggatcg caccccgagg
     1201 gggctagctc aagccaggag gcccgaaacc attgttcaac aggatttacc accaaggcac
     1261 caagacacca agaaaagcca caaaggcgag gcttcgttct gttcttggtg ccttggcgtc
     1321 ttggtggtga tcagttcgtt ctttttgggc tcggagtcct ccacccggtt cagccctgca
     1381 tcggggtctc taccagcccg gccttcctct tccggtaccg cgcccaccgc agccggaacc
     1441 ggtccatgta gaggtagatg accggggtgg tgtagagggt caggagctgg ctgaaaagga
     1501 gaccgcccac gatggcgatg cccaggggct ggcgcagctc ggagccggtg cccatgccga
     1561 tggccagggg caggccgccc agcagggccg ccagggtggt catggtgatg gggcggaagc
     1621 gcagcaggca ggcctggaag atggcctttt caggggtgac gccctcgcgg cgctccacct
     1681 cgatggcgaa gtcgatcatg aggatggcgt tcttcttcac gatgccgatg agcaggatga
     1741 tgccgatgaa ggcgatgacg ctcagctcgg tgcggaaggc cagcagggcc agcagggcgc
     1801 ccacgccggc ggagggcagg gtggagatga tggtcagcgg gtggatgagg ctctcgtaga
     1861 gcatgccgag cacgacgtag accaccagga gggccgccag cagcagcagg ggctggttgg
     1921 cgagggaggc cttgaaggcc tgggcggtgc ccatgtagct gccccgcagg gttcccggca
     1981 ggtggatctc ctgttcggcc cggtccacgg cggccaccgc atcccccagg gccacgccca
     2041 cgggcaggtt gaaggacagg gtgacggagg gcagctggcc ctggtggttc acggacaggg
     2101 ccgtgttgcg gcgctccagg cgggtgaagg cgctgagggg caccaggctg ccggtgttgg
     2161 agcggacata gatgtggcgc agcccgtccg gcgtccccat gaagggggaa tccacctcca
     2221 tcaccacgtg gtactggttc aggggcgtgt agatggtgga gacgaagcgc tggccgaaag
     2281 cgtcgtagag ggccgcgtcg atggcttggg gccgcacgcc caggcgcgag gccgtggcgc
     2341 gg
//
LOCUS       DASUDT010000156         4302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_648822, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000156 DASUDT010000000
VERSION     DASUDT010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4302
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648822"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VFV26_03295"
     CDS             <1..629
                     /locus_tag="VFV26_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HEX4845216.1"
                     /translation="PDVHPKLHKLLGRLKYRHSYGQNVLDHTKEVAHIAEYMAGELGL
                     SPRIAKRAGLFHDIGKAIDREVEGTHIEIGMQLMQRYGEKEEVIHAMSCHHGDFEPRT
                     VEAMLITAADALSAARPGARREMLETYVKRLEKLEEIAGSYKGVQKSYAMQAGREIRI
                     LVDAGSVNDDQAYWIAKDVSRRIEAEMQYPGQIKVTVMRELRAVEIAR"
     gene            complement(751..1395)
                     /locus_tag="VFV26_03300"
     CDS             complement(751..1395)
                     /locus_tag="VFV26_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4845217.1"
                     /translation="MTTVPSAPIRLLIVDDHPVVRDGLVAILHQSEPDIEVVGEAGDG
                     LEAVTAWRALRPTVTIMDLQLPGQPGVEAIAAIRREDPDARVLVLTTFDGDADIQRAL
                     EAGARGYLLKSMRRATLIEAVRAVAAGQRFLPPAAAARLVEAMESERLTPRELDVLRL
                     LAQGQRNREIADELGLAEPTVKIHVNNLLRKLQVKDRTEAAMVALRRGIIHMQP"
     gene            complement(1392..>4302)
                     /locus_tag="VFV26_03305"
     CDS             complement(1392..>4302)
                     /locus_tag="VFV26_03305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEX4845218.1"
                     /translation="CVALSGPLGALESSVSRPQARIQRVWRSEAGLQHDTATALAEGR
                     DGALWIGTEDGLVCFDGSRFNRFSRGDAPAFSHHDVHSLAGTADGSLWIGTTQPGLFR
                     LKEGVFTALGSAEGLPDSPILRLLEDRRGTLWAAPMQGPLLRLEGGRFLPVPLEGSRR
                     FRIRALAEDAEGTLWIGTAGSGLWRLQNQRMELVALSAGDLTALAVDASGTVWAGSRD
                     QGLLHLVEGRLEPPAWSQSLPARPITALHAGRDGSLWIGTEQAGLFQRTRDGRLEAAP
                     GGPKTRWTVLSLLEDRGGTLWIGSEDRGLRASIAVPFQAIPAADPEPDAPVRMVCQDT
                     AGVVWCLSGDQSLGQIRDGRTLRVLLGGALGPEPISALWPRRAGGLWIGTRGGGLFIL
                     DQGRAQRVPGLGGPPTDGILSLYEDPAGSLWVALARQGLMKLPPGGGAPQFFPLARGV
                     VAMTGGGAAPVYLASTSLGLGILDAEGLRWLGSAQGLGSIGAQALHLDAEGHLWIGTA
                     DGLRRFWNGAFHAFSSPQGLLKLSIHAIQEDANQRLWLSTSQGVLQAPRAALMQGLPL
                     SGPSPLAIFDHGDGLPARETQRGPQPAAWLTREGDLWVPTSRGLARLDPRFLPTPPPL
                     NLRLVKVLSDESVLPAEGSLTLQPGSHRLEIHYTAISLTDAGKVRFRYRLEGIDPGWN
                     EVGDRRFAVYSSLPPGARRFLLQAWRPGEDRPPQELALPITVQPFFHQRPLFWALCAA
                     AAGLFGWWLLRLRLQQVEARSAVLDERNRMAREIHDHLAQGFTGVLLQLEAAEARLAR
                     MEGDPEPVLTRLGHARELAAASLQEARRSVMALSPRKPEGADLLGSLRILSDRLLAGT
                     GIQVELAQSGTPRPLGPRVEEELLRMAQEALTNALRHGKARWVRVTIQHGSRQVRLRI
                     EDDGQGFDPSKGASGYGLRSIRETLRQLRGHIDIDSGPGLGTRITITLPLRRWRP"
BASE COUNT          650 a         1492 c         1589 g          571 t
ORIGIN      
        1 tccccgacgt ccaccccaag ctccacaagc tcctggggcg cctgaagtac cgccactcct
       61 acggccagaa cgtgctggac cacaccaagg aggtggccca catcgcggag tacatggccg
      121 gcgagttggg cctcagtccc cggatcgcca agcgcgccgg actgttccac gacatcggca
      181 aggccatcga ccgcgaggtg gagggcacgc acatcgagat cggcatgcag ctgatgcagc
      241 gctacgggga gaaggaggag gtcatccacg ccatgagctg ccaccacggg gacttcgagc
      301 cccggacggt ggaggccatg ctcatcaccg ccgcggacgc cctcagcgcg gcgcgccccg
      361 gcgcccgccg cgagatgctg gagacctacg tcaagcgcct ggagaagctc gaagagatcg
      421 ccggcagcta caagggcgtg cagaagagct acgccatgca ggcgggccgc gagatccgaa
      481 tcctcgtgga cgccggctcc gtgaacgacg accaggccta ctggatcgcc aaggatgtca
      541 gccgccgcat cgaagccgag atgcagtacc ccggccagat caaggtcacg gtcatgcggg
      601 agctgcgggc cgtggagatc gcgcggtagg cgtcatcacc ggagggccag gccatgcgaa
      661 cggttgtcct gctcgtcctc agaaacctac ctgtgggcag gtctctgcct ggtgggcgcg
      721 gtgttcttca cgttccggaa gtaggctggc tcagggctgc atgtggatga tgccgcgccg
      781 cagggccacc atggcggcct cggtgcggtc cttcacctgc agcttgcgca gcaggttgtt
      841 cacatggatc ttcaccgtgg gctccgccag gcccagctcg tcggcgatct cgcggttgcg
      901 ctggccctgg gccaggagcc gcagcacgtc cagctcgcgg ggggtgagcc gctcggattc
      961 catggcctcc accagccgcg ccgcggccgc ggggggcagg aaccgctgcc ccgcggccac
     1021 ggcccggacg gcttcaatga gtgtggcccg ccgcatgctc ttcagcaggt agccccgggc
     1081 accggcctcc agggcccgct ggatgtccgc atcgccatcg aaggtcgtca gcaccagcac
     1141 ccgggcatcc ggatcctccc ggcggatggc ggcgatggcc tcgacgccgg gctggcccgg
     1201 cagctggagg tccatgatgg tgaccgtggg ccgcagggcc cgccaggcgg tgacggcttc
     1261 cagaccgtcg cccgcttcgc cgaccacttc gatgtcgggc tcgctctggt ggaggatggc
     1321 gacgaggcca tcccgcacca ccgggtggtc gtccacgatg agcagccgga tgggagccga
     1381 tggaaccgtg gtcatgggcg ccacctcctt aggggcaggg tgatggtgat gcgggtgccg
     1441 aggcccgggc cgctgtcgat gtcgatgtgg ccccggagtt gccgcagggt ctcacgaatg
     1501 ctgcggaggc cgtagcccga ggcccccttg gaggggtcga atccctggcc atcgtcctcg
     1561 atccgcagcc gcacctggcg gcttccgtgc tggatcgtca cccggaccca gcgggccttg
     1621 ccgtggcgga gggcattggt gagggcctcc tgggccatgc gcagcagttc ctcctccacc
     1681 cggggcccca ggggcctggg cgtgccggac tgggccagct ccacctggat gcccgtgccc
     1741 gccagcaggc gatccgacag gatgcggagg gagcccagca ggtcggcgcc ttccggtttg
     1801 cggggactga gggccatgac ggaccgccgg gcctcctgga ggctcgcggc cgccagctcg
     1861 cgggcgtggc cgagccgggt cagcacgggc tccgggtccc cttccatgcg cgccagccgg
     1921 gcctcagcgg cctccagttg gagcagcacg cctgtgaagc cctgggccag gtggtcgtgg
     1981 atctcccggg ccatgcggtt gcgctcgtcg agcaccgccg agcgggcctc cacctgctga
     2041 aggcggaggc gcagcagcca ccagccgaag agccctgcgg cggcggcgca cagggcccag
     2101 aacagggggc gctggtggaa gaagggctgg acggtgatgg gaagggccag ctcctgcggc
     2161 ggacggtcct cccccggccg ccaggcctgg agcaggaagc ggcgcgcgcc gggcggcagg
     2221 ctggaataca ccgcgaaccg ccggtccccc acctcgttcc agccgggatc gatgccttcc
     2281 aggcggtacc ggaaccgcac cttcccggcg tccgtgaggc tgatggccgt gtagtggatc
     2341 tccagccggt ggctgcccgg ctgcagggtc aatgaacctt ccgcgggcag cacggactcg
     2401 tcgctcagca ccttcaccag gcgtaggttc aggggtgggg gtgtcggcag gaaccgcgga
     2461 tccaggcggg ccaggccccg gctcgtgggc acccagagat ccccttcgcg ggtgagccag
     2521 gcggccggtt ggggcccccg ctgggtctcc cgggccggaa ggccgtcccc gtgatcaaag
     2581 atggccaggg gagagggacc cgagagcgga agcccctgca tcagggcggc ccggggcgcc
     2641 tgcagcacgc cctggctggt gctgagccaa agccgctggt ttgcgtcctc ctggatggcg
     2701 tggatgctca atttcaggag gccctggggg ctgctgaatg cgtggaaggc tccattccag
     2761 aagcggcgca gcccatcggc agtgccgatc cagaggtggc cttcggcatc caggtgcagg
     2821 gcctgggcgc cgatggagcc cagcccctgg gcagagccca gccagcgcag gccctcggca
     2881 tcgaggatgc cgagccccaa agaggtgctg gccaggtaga cgggcgcggc gccgccaccg
     2941 gtcatggcga ccacgccccg ggccaggggg aagaactggg gggcgccgcc ccccgggggc
     3001 agcttcatca ggccctggcg ggccaaggcc acccagaggc tgcccgccgg gtcttcataa
     3061 agcgagagga tgccatccgt cggcgggccg cccaggccgg gaacccgctg ggccctgccc
     3121 tggtccagga tgaacaggcc gccgccgcgg gtgccgatcc agagacctcc ggcgcgccgg
     3181 ggccagaggg cggagatggg ctccgggccc agggccccgc ccagcagcac ccgcagggtc
     3241 cggccatccc ggatctggcc cagggactgg tctcccgaga ggcaccacac cacgccggcg
     3301 gtgtcctggc agaccatccg aacaggagca tccggttccg gatccgccgc cgggatggcc
     3361 tggaagggca cggcgatgga ggccctgagt ccccggtctt cgcttccgat ccacagcgtt
     3421 ccgccccggt cctcgagcag ggagagcacc gtccagcggg tcttcggtcc gccgggcgcc
     3481 gcttccagcc gtccgtcccg ggtccgctgg aagaggccgg cctgttcggt gccgatccac
     3541 aggctgccat cccggccggc gtggagggcg gtgatgggcc gggcggggag ggactggctc
     3601 caggcggggg gctccaggcg gccttccacc aggtgcaaca ggccctggtc ccgggagcca
     3661 gcccacaccg tgcccgaggc atccaccgcc agggccgtga ggtccccggc ggacagggcg
     3721 accagttcca tccgctgatt ctggaggcgc cagaggccgg accccgcggt gccgatccat
     3781 agggtgccct ccgcatcctc cgccagggcc cggatccgga agcgccggct cccctccagg
     3841 gggacgggca ggaagcggcc accctccagg cgcaggaggg gcccctgcat gggggcggcc
     3901 cacaaggtgc cccggcggtc ctccaggagg cgcaggatgg ggctgtcggg gaggccctcg
     3961 gcggagccca gggcggtgaa aacgccttct ttgaggcgga acaggccggg ctgggtggtt
     4021 ccgatccaga ggctgccatc ggccgtgccc gccagggagt gcacgtcatg atgggagaag
     4081 gcgggggcat cgccccggga gaagcggttg aaccgggatc cgtcgaagca cacgagaccg
     4141 tcttcggtgc cgatccacaa ggcgccgtcc cgcccctcgg ccagggccgt ggccgtgtcg
     4201 tgctgaaggc ccgcctcgct gcgccagacc cgctggatcc gggcctgggg ccgggagaca
     4261 ctggattcga gggcgcccag cgggccggat agggccacgc ac
//
LOCUS       DASUDT010000157         4856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_74358, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000157 DASUDT010000000
VERSION     DASUDT010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4856
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74358"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2316)
                     /locus_tag="VFV26_03310"
     CDS             complement(<1..2316)
                     /locus_tag="VFV26_03310"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEX4845219.1"
                     /translation="MRPFLHLFAWLLLGLASALPPLAAQQPAFRRFGLRDGLPQSQVT
                     ALLEDRQGFLWVGTNTGGVARLGASGFRTFAGPQGLKALFVRSLMESPSGSIWVASQE
                     GVSEIRGEMVRNYGPAQGEASFEGGTLGLDAQDRILVGNRHGLFRFEGGGFVQVSLPS
                     PWPGGPVRRLARDRARGVWILGQGNTVARWDGQELHLYPLSPQHPGGRIRDLQIDALG
                     RAWLLLDGALLRMDKGRWLHQPLQGLPPRAPRMASLRFDTQGEGFQISLGGDGVLVRE
                     PGGGTRLLTADTGLPRDRISIAMRDRRGVLWVGSDGDGLVAQALPDLLTLDSSTVALG
                     RDLAAVSGILELNPTRYLLATSTGLYQVDEGRHITRHWTRQQGLPATETWGMLPDGSG
                     GVWVGTDRGLARWKDGRVSAAGPREMSKAAVLTLVRDGTGILAGTDQGLFQLDGQGRL
                     LAHIRLPAEAGDETVSNILRHEGRLLVATGYGLWELTGGKLQRTFPDAPFATSTVTAM
                     TSDARGRLWIGTMKGLHLWKDGQWASFGVAEGLPDEGINFIVDLGHGRMAFGHNKGVT
                     LLEGRELHHLSRSQGLVSEETNHDGFLLDSRGRLWIGMIGGVCILQNARSFRNAPLRP
                     PTLTEVRWPGGSEALSDSAQVPPRPDFLDLSFDTGDPLVPSRLQYQAYLQGVDEGWRP
                     VNQGLTLQYRNLGAGRYEFHLRASTDGVAWVEAPPVPIEVSPAWHERWVVRALLALAL
                     VALLGWGLWWRVHVLAQRSRELEETIEARTLL"
     gene            2400..3179
                     /locus_tag="VFV26_03315"
     CDS             2400..3179
                     /locus_tag="VFV26_03315"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX4845220.1"
                     /translation="MLVDAHCHLTGSYLAEDQVEATLARARAQGVTGFIAVGTDLEDS
                     RTVLDLARRLPGVQASLGIHPHEAKGWTEETGPALAALAADPAVRFVGETGLDWHYDL
                     SPRDTQETVFRAQIRLAKALRKPLMIHTRSAPEATLRILEEEGADAVRGIIHCFSEDR
                     AFAARALDLGFYLSFSGIATFKKAESVRDVAAWAPADRILVETDAPFLAPVPFRGKPN
                     EPGYVRFTAEAVAELRGIPSLALAELTTRNLEALCGWAPSS"
     gene            3155..3835
                     /locus_tag="VFV26_03320"
     CDS             3155..3835
                     /locus_tag="VFV26_03320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845221.1"
                     /translation="MRLGALFLTSAALMAAPPAAPAAQRRHVLPWEGVPPLAWQAESW
                     LPPSAVPGPPVPSQGPMAVHLTGDGTLRISDARGLIRLLAGLPGRPLRAWRDGGVPLD
                     PVVGAWGFPTDSPLSQGLGGLHWSAGDFRPFLRGLLWVLEDGEGFLTVVHPATARMIH
                     LPLPQGRDLRIRFLPDRLEVAAGDVEKGAPRQWSTPWMGLLPRLAALGPHPDSPKSGT
                     ALAPFPKD"
     gene            3958..>4856
                     /locus_tag="VFV26_03325"
     CDS             3958..>4856
                     /locus_tag="VFV26_03325"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEX4845222.1"
                     /translation="MNASFTHSRLAAMLLLPAAIVSAAPQDPAEDETYQGESPERYAM
                     VRALEGDVRIRKGDLDETLSRGTPIAEGDVVESRGRGVLQLGDGTRIAFGGATRFTVA
                     ALFTDRKGEKQVLLRLDHGRLRILLGGQSDARFRVDTPSGIATCFDKGAFTIEAERDR
                     VVRLKVHSGRVTFANDRDEARISAGERLTVYSPQDGLDRVRSFNTYDGDEFDRWSERA
                     VVVRRGESWDRVPSEIRYYADDLDGHGRWVQSSEFGWVWQPNGVAEDWRPYYQGRWAP
                     YSGGMTWISDEPWAYVAYHHGRW"
BASE COUNT          725 a         1680 c         1731 g          720 t
ORIGIN      
        1 gaggagggtc cgcgcctcga tggtctcctc caattcccgg gagcgctggg ccaggacgtg
       61 gacccgccac cagaggcccc agccgagcag cgccaccagg gccagggcga gcagggcccg
      121 caccacccag cgctcatgcc aggcagggct cacctcgatg gggacggggg gggcctccac
      181 ccaggccacg ccatcggtgg aggcgcgaag gtggaactcg tagcggcccg cgccgaggtt
      241 ccggtactgg agggtgaggc cctggttcac cggccgccag ccttcgtcca cgccctggag
      301 gtaggcctgg tactggaggc gggagggtac cagcggatct ccggtatcga agctgagatc
      361 gaggaaatcc gggcgtggag gcacctgggc ggaatccgag agggcctcgg aaccgccggg
      421 ccagcgcacc tcggtgagcg tggggggacg caggggcgcg ttccggaaac tccgggcgtt
      481 ctggaggatg catactccgc cgatcatgcc gatccagagg cggcccctgg aatccaggag
      541 gaacccgtcg tggttggttt cttcggagac cagcccctgg ctgcggctga ggtgatggag
      601 ttcccggccc tccagcagag tcacgccctt gttgtggccg aaggccatgc gcccgtgccc
      661 caggtccacg atgaagttga tcccctcgtc cggaagcccc tcggccacgc caaagctggc
      721 ccattggcca tccttccaga ggtgcaggcc cttcatggtg ccgatccaca ggcgtccccg
      781 ggcatccgag gtcatggcgg tgacggtgga ggtggcgaat ggggcatcgg ggaaggtccg
      841 ctggagcttc ccgccggtca gttcccaaag gccgtacccg gtggcgacca gcagacgccc
      901 ctcgtggcgg aggatgttgg aaaccgtttc gtcgccggcc tcggcgggca ggcggatgtg
      961 cgccagcagg cggccctggc catccagctg gaacaggccc tggtcggttc cggcgaggat
     1021 gccggtgcca tcccggacca gggtgaggac ggctgctttc gacatctccc ggggaccggc
     1081 ggcggacacg cggccatcct tccagcgggc gagcccgcgg tccgtgccca cccagacgcc
     1141 ccccgatccg tccgggagca tgccccatgt ttcggtggca ggcaggccct gctgccgcgt
     1201 ccagtgccgc gtgatatggc gtccctcgtc cacctggtag aggccggtgc tggtggccag
     1261 caggtagcgc gtggggttga gttcgaggat gccggacact gcggccagat ccctccccag
     1321 cgccacggtg gaactgtcca gggtgaggag atccggcagc gcctgcgcca cgaggccatc
     1381 tccgtcggaa cccacccata gcacgccccg ccggtcccgc atggcgatgg agatacgatc
     1441 ccgcggaagg ccggtgtcgg cggtgagcag gcgggtgccc ccgcctggtt cccgcaccag
     1501 cacgccgtcg ccgccaagcg agatctggaa gccctcgccc tgggtgtcga accggaggct
     1561 ggccatgcgc ggggcgcggg gcgggagccc ctgcaacggc tggtgcagcc agcgcccctt
     1621 gtccatgcgg agcagggccc catcaaggag cagccaggcc cgccccaggg cgtcgatctg
     1681 gagatcgcgg atccggccac ccgggtgctg cggggacagg gggtagaggt ggagctcctg
     1741 cccgtcccag cgggccacgg tgttgccctg ccccaggatc cagacgccgc gcgcgcggtc
     1801 gcgggccagg cgccggaccg ggcctccggg ccagggggag ggcagggaga cctggacgaa
     1861 cccgccacct tcgaaccgga acaggccgtg gcggttgccc accaggatgc ggtcctgggc
     1921 atccagcccc agggtgccgc cctcgaagct cgcttcgccc tgggcagggc cgtagttccg
     1981 gaccatctcg ccgcggatct cggacacgcc ctcctggctg gccacccaga tgctgccgga
     2041 aggggactcc atgagggagc ggacgaagag cgccttgagg ccctggggcc ctgcgaaggt
     2101 ccggaacccg gaggccccca ggcgcgcgac gccgccagtg ttggtgccca cccacaggaa
     2161 gccctgccgg tcctccagga gcgccgtcac ctggctctgg ggcaggccat ccctcaggcc
     2221 gaaccgccgg aacgcgggct gctgtgccgc aaggggcggg agggcgctgg cgaggcccag
     2281 cagaagccag gcgaaaaggt ggaggaaggg acgcatggag aggaggtccg tcgttgatta
     2341 ggaccatcgg cgcggatgac gcataccgtg atccctggga ggcatgggac tatcaaacca
     2401 tgcttgtgga cgcgcattgc catctcacgg ggagctacct ggcggaggac caggtggagg
     2461 cgaccctggc ccgggcacgg gcccagggtg tcacgggttt catcgccgtg ggcacggatc
     2521 tggaggactc ccgcacggtg ctggacctgg cccggcgcct gccgggcgtg caggccagcc
     2581 tggggatcca tccccacgaa gccaagggct ggacggaaga gacgggaccc gccctggcgg
     2641 cgctggccgc ggatccggcc gtgcggttcg tgggcgagac ggggctggac tggcactacg
     2701 atctgagccc ccgggacacg caggagacgg tcttccgggc ccagatccgc ctggcgaagg
     2761 cgctgcggaa gcccctcatg atccatacgc gatccgcgcc ggaggccacc ctccggatcc
     2821 tggaagagga gggcgcggac gccgtgcggg gcatcatcca ctgcttcagc gaggaccggg
     2881 ccttcgcggc gagggccctg gatctgggct tctacctgag cttctcgggc atcgccacct
     2941 tcaagaaggc tgaatccgtg cgggacgtgg ccgcctgggc ccccgcggac cgcatcctgg
     3001 tggagacgga tgcgcccttc ctggcgccgg tccccttccg cggcaagccc aacgaacctg
     3061 gctacgtgcg cttcaccgcc gaggccgtgg cggaactgcg cggcatcccc tctctggcat
     3121 tggccgaact caccacccgc aacctggagg ccctgtgcgg ctgggcgccc tcttcctgac
     3181 cagtgcggcg ctgatggccg cccctcctgc cgcccccgcg gcgcagcgcc gccacgtcct
     3241 gccctgggag ggcgtcccgc ccctggcctg gcaggcggag tcctggcttc ccccctcggc
     3301 cgttcccggt ccccccgtcc cttcccaagg gcccatggcc gtccatctga caggggatgg
     3361 caccctgagg atcagcgatg cccggggcct gatccggctg ctggcgggcc tgcccgggcg
     3421 gcccctccgg gcctggcggg atggcggcgt ccccctggat ccggtggtgg gggcctgggg
     3481 gtttcccacc gattccccgc tgtcccaggg actgggcggc ctccactgga gtgcgggcga
     3541 tttccggccc ttcctgcggg gcctgctctg ggtgctggag gatggcgagg gcttcctgac
     3601 cgtggtgcat ccggccacgg cccggatgat ccaccttccc ctgccgcagg ggcgtgatct
     3661 gcggatccgt tttcttccgg atcgtctgga agtggccgcc ggggatgtgg agaagggcgc
     3721 gccgcgccag tggtccacgc cctggatggg cctgctgccg cggctggccg ctctgggacc
     3781 ccaccccgac tcccccaagt ccggtaccgc cctcgcccct ttccccaaag actgagggtc
     3841 gaaggctcga agagctgaac tctgaaaacc ggggacttgc gaaactggca tgaccctggc
     3901 tcttaccttc ctcggaaccg accctgtggg tatcggcatc caacgagcgg aggtcccatg
     3961 aacgcgtcct tcacccattc acgccttgcg gcgatgctgt tgctccctgc ggccatcgtg
     4021 agcgcggcgc cccaggaccc ggccgaagac gagacctacc agggcgaatc ccccgagcgg
     4081 tacgccatgg tgcgggcgct ggaaggcgat gtccgcatcc gcaagggcga cctggacgag
     4141 accttgagcc gtggcacgcc cattgctgaa ggcgatgtcg tggaaagccg cggtcgtggc
     4201 gttctgcaac tgggcgacgg cacccgcatc gccttcggtg gcgccacccg cttcaccgtc
     4261 gcggccctct tcaccgaccg caagggcgag aagcaggtcc tgctgcgcct ggaccacgga
     4321 cggttgcgga ttctcctggg cggccagtcc gatgcccgct tccgggtgga taccccttcg
     4381 ggcatcgcca cctgtttcga caagggggct ttcaccatcg aggccgaacg cgaccgcgtg
     4441 gtgcgtctga aggtccacag cggccgggtg accttcgcca atgatcggga cgaagcccgc
     4501 atcagcgccg gcgagcggct cacggtgtac agcccccagg atggtctgga tcgcgtgcgc
     4561 agcttcaaca cctacgatgg cgacgagttc gaccgctgga gcgaacgggc cgtggtcgtc
     4621 cggcgcggcg aaagctggga ccgcgtgcct tcggagatcc gatactacgc ggacgacctg
     4681 gatggccatg gccgttgggt ccagtcctcc gagttcggct gggtgtggca gcccaatggc
     4741 gtcgccgagg attggcgccc ctactaccag ggtcgctggg cgccctattc gggcggcatg
     4801 acctggattt ccgacgaacc ctgggcctac gtggcctacc accatggccg ctggca
//
LOCUS       DASUDT010000158         4382 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1753261, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000158 DASUDT010000000
VERSION     DASUDT010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753261"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..631
                     /locus_tag="VFV26_03330"
     CDS             53..631
                     /locus_tag="VFV26_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845223.1"
                     /translation="MTAQPGKPPKKEKVKKQTPEERLEALRYNHMMYGPTAKEMKPVV
                     KKVNYGSAYLVHPKFQSLMTAFKKGTSFQFDVKDKEKTYVISTDGSSIQFNGKIIYYS
                     RPMNKYEDHLLLDRVAMTHYQTIDALVHLAFAVLRSFPELGAPGLSYAHHQFHHGGET
                     LESAIAEQGPNLLMGSFRHAKVQEKPKSKGLY"
     gene            complement(663..1091)
                     /locus_tag="VFV26_03335"
     CDS             complement(663..1091)
                     /locus_tag="VFV26_03335"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX4845224.1"
                     /translation="MRPLKQLIEGKGPLVSVGPDDTVLAALTLLAQHEIGALLVLEGG
                     RLVGIFSERDYARKIILKGKASKDTLVREIMSDKVSCVTLSQTVEECMALMTNKRIRH
                     LPVLGAGDEVLGILSIGDLVKETISDQKFTIEQLVHYIQS"
     gene            1305..2846
                     /locus_tag="VFV26_03340"
     CDS             1305..2846
                     /locus_tag="VFV26_03340"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX4845225.1"
                     /translation="MSLPKKLKDHAARHAEATEPHPEAARKQAAQGKLQARERITAIL
                     DPGSFHEYDLFVEHKCSDFGMEKKQLPGDGVITGTGTILGHPVAIYAQDFTVAGGSLG
                     LAHARKITKIMDHAIKLGIPLIGINDSGGARIQEGVNSLAGYGEIFYRNTLASGVIPQ
                     ISIILGPCAGGAVYSPALTDFVFVVDKISKMFITGPEVIKTVLGEEISMEDLGGARVQ
                     AEISGNAHFYAESEAECFEQVKRLVTYIPWNNRKKADPFGAKAPDAAFDLERIIPSEA
                     HRPYDVRDVMRAVCDGSDFMEVQELWAANIVVGFARMNGRTVGMVANQPMVLAGVLDV
                     DSSDKAARFIRFCDAFQIPLVTFVDLPGYLPGIDQEHAGVIRHGAKLLYAYSEATVPK
                     ITVILRKAYGGGYIAMCSRHLGADFVFAWPCAEIAVMGPEGAANIIFKGEIAAAADPE
                     AFRKEKVRDYTEKFASPYVAAANGHVDAVIAPRQTRDFLLHALEISEQKAEQRPARKH
                     GVPPF"
     gene            2857..3183
                     /locus_tag="VFV26_03345"
     CDS             2857..3183
                     /locus_tag="VFV26_03345"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HEX4845226.1"
                     /translation="MTIRQTLHLNDTAYETTLTRKYALRKPYVPKDPGRVVAIIPGLI
                     LEVLVKPGDQVRRGQSLLVLEAMKMQNHLAAPLDGTVLEVLPVPGGTVAKGQLLVVLH
                     CNPDTV"
     gene            3269..4261
                     /gene="argF"
                     /locus_tag="VFV26_03350"
     CDS             3269..4261
                     /gene="argF"
                     /locus_tag="VFV26_03350"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005318430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX4845227.1"
                     /translation="MAVNLKGRSFLTLMDFTPLEVRYLLDLSRDLKAKKRMGVFNDLL
                     KGKNIELLFEKTSTRTRCAFEVGALEEGAHVTFLDSASSQVGKKESIEDSAKVLGRFY
                     DGIEYRGYKQEVVEALAKHSGVPVWNGLTDTDHPTQILADFLTIEEHVAKPLHKVKLV
                     FCGDIRNNMSYALMYGAAKTGMHMVALGPKALAPDPAVLAAARKAAEETGATIEVTDD
                     VDAAVKGADVLYTDVWASMGEEDQIPERVKLLTPFKVTMEMIQKTGNPDVKFLHCLPA
                     FHDFETKLAKEQKALGFDIREVTDEVFRSRHSVVFDEAENRMHTIKAVMVATIG"
BASE COUNT          835 a         1525 c         1321 g          701 t
ORIGIN      
        1 gcggctccat gccacaatgc cttcagccag cgattgcgtg atgaggaacc ccatgaccgc
       61 ccagcccgga aagccgccca agaaggaaaa ggtcaagaag cagacgccgg aggaacgcct
      121 tgaggccctg cgttacaacc acatgatgta cggccccacg gccaaggaaa tgaagccggt
      181 ggtcaagaag gtcaactacg ggtccgccta tctggtccac ccgaagttcc agagcctgat
      241 gacggccttt aaaaagggga cttccttcca gttcgacgtc aaggacaagg aaaagaccta
      301 cgtcatctcg acggatggat ccagcatcca gttcaatgga aaaatcatct actattcccg
      361 gcccatgaac aaatatgagg accacctgct gctggaccgg gtcgccatga cccattacca
      421 gaccatcgat gccctggtcc atctggcctt cgcggtactc cgcagctttc cggaactggg
      481 ggcgcctggc ctgtcctacg cccaccatca gttccatcac ggcggagaga cgctggagtc
      541 cgccatcgcc gagcaggggc ccaacctcct gatgggctcc ttccggcacg ccaaagtgca
      601 ggaaaagccc aaaagcaagg gcctgtactg agcacaggcc ccgggtgccg tcctgaaggg
      661 catcagctct ggatgtagtg caccagctgc tcgatggtga atttctggtc ggagatggtc
      721 tctttcacca ggtcgccgat ggagaggatg cccagcacct cgtcgcccgc gccgagcacc
      781 ggcaggtggc ggatgcgctt gttggtcatg agcgccatgc actcctccac cgtctgggag
      841 agggtcacgc agctgacctt gtcgctcatg atctcccgca ccagggtgtc cttggaggcc
      901 ttgcccttga ggatgatctt ccgggcgtag tcgcgctcgg agaagatccc caccaggcgg
      961 ccgccttcca gcaccagcag ggcgccaatc tcgtgctggg ccagcagggt cagggccgcc
     1021 agcacggtat cgtccggtcc cacggacacg aggggtccct tgccttcgat cagctgcttc
     1081 agtggccgca tgcctgcctc cccggtctgt tggctttgat ggaatcgtgg ccctgactat
     1141 acggccaacc cggggtctgt ggacggggga atgcgccgcc gccccatccg aaccgtgatc
     1201 aatgccgcag gggtcccctg gcatagtctt tcacgatgca cgggtcggct ttattccatc
     1261 gtcggccctg attgacaatc cgccccccct ccgaggatcc ccccatgtcc ctgcccaaga
     1321 agctcaagga ccacgccgcg aggcacgccg aggccacgga gccccacccg gaggcggcgc
     1381 ggaagcaggc ggcccagggc aagctccagg cccgggagcg catcacggcc atcctcgacc
     1441 ccggctcctt ccacgagtac gacctcttcg tggagcacaa gtgctccgac ttcggcatgg
     1501 agaagaagca gctgcctggg gatggcgtca tcaccggcac cggcacgatc ctgggccacc
     1561 ccgtggccat ctacgcccag gacttcaccg tggcgggcgg atcgctgggc ctggcccacg
     1621 cccgcaagat caccaagatc atggaccacg ccatcaagct gggcatcccc ctcatcggca
     1681 tcaacgattc cggcggggcc cgcatccagg agggcgtgaa ctccctggcg ggctacggcg
     1741 agatcttcta ccgcaacacc ctggcctcgg gcgtcatccc ccagatatcg atcatcctgg
     1801 gcccctgcgc gggcggcgcc gtctactccc cggccctgac cgacttcgtc ttcgtcgtgg
     1861 acaagatctc caagatgttc atcacggggc ccgaggtcat caagaccgtg ctgggcgagg
     1921 agatctccat ggaggacctg ggcggcgccc gggtgcaggc ggagatctcg ggcaatgccc
     1981 acttctacgc ggaaagcgag gccgagtgct tcgagcaggt gaagcgcctg gtgacctaca
     2041 tcccctggaa caaccgcaag aaggccgatc ccttcggcgc caaggcgccg gacgcggcct
     2101 tcgaccttga gcgcatcatc ccctccgaag cccaccggcc ctacgacgtg cgcgatgtca
     2161 tgcgcgcggt ctgcgacggc tcggacttca tggaggtcca ggaactgtgg gccgccaaca
     2221 tcgtggtggg cttcgcccgc atgaacgggc gcaccgtggg catggtggcc aaccagccca
     2281 tggtgctggc cggcgtgctg gacgtggaca gctccgacaa ggccgcccgt ttcatccgct
     2341 tctgcgatgc cttccagatc cccctggtca ccttcgtgga cctgccgggc tacctgccgg
     2401 gcatcgacca ggagcacgcg ggcgtcatcc gccacggcgc caagctcctc tacgcctaca
     2461 gcgaggccac ggtccccaag atcacggtga tcctccgcaa ggcctacggc ggcggctaca
     2521 ttgccatgtg ctcgcggcac ctgggcgcgg atttcgtctt cgcctggccc tgcgccgaga
     2581 tcgccgtcat gggccccgaa ggcgccgcca acatcatctt caagggagag atcgccgccg
     2641 cggcggaccc cgaggccttc cgcaaggaga aggtccgcga ttacaccgag aagttcgcca
     2701 gcccctacgt ggccgccgcc aacggccatg tggacgcggt catcgctccc cggcagaccc
     2761 gggacttcct cctccacgcc ctggagatct ccgagcagaa ggccgagcag cggcccgccc
     2821 ggaaacacgg cgtgcccccc ttctgagcga gctcccatga ccatccggca gaccctccac
     2881 ctgaacgaca cggcctacga gaccaccctc acccgcaaat acgccctgcg gaagccctac
     2941 gtgccgaagg atcccgggcg cgtggtggcc atcatcccgg gcctcatcct cgaggtgctc
     3001 gtgaagcccg gggaccaggt gcggcggggt cagagcctcc tcgtcctgga ggccatgaag
     3061 atgcagaacc atctggccgc ccccctggat ggcaccgtcc tggaggtgct ccccgtgccc
     3121 ggcggcaccg tggccaaggg gcagctcctg gtggtgctcc actgcaatcc tgacactgtg
     3181 taaacccccc tccggcccct ccccttccgg accacggtca ccgggacgaa cggctaccct
     3241 ggggcctgga ttcgcattgg aggaacccat ggccgtcaac ctcaagggac gcagctttct
     3301 cacgctgatg gacttcaccc cgctggaggt gcgctacctc ctggacctct cccgggatct
     3361 gaaggccaag aagcgcatgg gggtgttcaa cgacctgctc aagggcaaga acatcgagct
     3421 gctcttcgag aagaccagca cccgcacccg ctgcgccttc gaagtcggcg cgctggaaga
     3481 aggcgcccac gtcaccttcc tggacagcgc cagctcccag gtgggcaaga aggaatccat
     3541 cgaggacagc gccaaggtgc tgggccgctt ctacgacggc atcgagtacc gcggctacaa
     3601 gcaggaagtg gtggaggccc tggcgaagca cagcggcgtg cccgtgtgga acggcctcac
     3661 ggatacggac catcccaccc agatcctggc tgacttcctc accatcgagg agcatgtcgc
     3721 caagcccctg cacaaggtga agctggtctt ctgcggcgac atccgcaaca acatgagcta
     3781 cgccctgatg tacggcgccg ccaagaccgg catgcacatg gtggccctgg gacccaaggc
     3841 cctggccccc gatcccgccg tgctggccgc cgcccgcaag gccgccgagg agaccggcgc
     3901 caccatcgag gtgacggatg atgtggacgc cgccgtgaag ggcgccgacg tgctctacac
     3961 cgatgtgtgg gccagcatgg gcgaggagga ccagatcccc gagcgcgtga agctgctcac
     4021 ccccttcaag gtcaccatgg agatgatcca gaagaccggc aaccccgacg tgaagttcct
     4081 ccactgcctg cccgccttcc acgacttcga gaccaagctg gccaaggagc agaaggccct
     4141 gggcttcgat atccgcgaag tcaccgacga ggtcttccgc agccgccaca gcgtggtctt
     4201 cgacgaagcc gagaaccgca tgcacaccat caaggcggtc atggtggcga ccatcgggta
     4261 aatccttgcc ttgcgcagaa atggccccaa tggggccatt tctgcgtatg aagtgctatg
     4321 gttgggacca ccaatccacc caacggaggc accatgcgca tggcccggct gttcgtcgtt
     4381 cc
//
LOCUS       DASUDT010000159         5715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_781423, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000159 DASUDT010000000
VERSION     DASUDT010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5715
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781423"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..1800
                     /locus_tag="VFV26_03355"
     CDS             250..1800
                     /locus_tag="VFV26_03355"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4845228.1"
                     /translation="MKRNTWIGLGIGVAVVAGGTAYVLTRPKDEVKWRMAKLDKGGIT
                     QRINATGAVSPVVQVAVGTQVSGVISALYVDYNSIVKKGQLIAQIDPTIWETQLRDAE
                     AGLERAKATMEDAKRQYDRARRLAAEKLLSDQDLEARLVAHQTSLASFENAKASLARA
                     RANLGYCNITAPVDGVVISRLADVGQTVAASFSTPNLFQIAQDLSKMKVQVSIGESDI
                     DEVKVGQRAMFTVDSLPDKQFAATVSLVRQEPITTQNVVNYVVELIVPNEPLPGSDEG
                     GQAVPGRPGSPDAGKGAAPEAAPDPEKAWARLKDRMEAQGVTKEQFLKRFKERMASQT
                     PGAAGRSRGMAATNQAPAGDPRALARVPGGASQLGGPKFMGSLALRSGMTANVTIITN
                     QRRDVMRVPNAALRFNPAAFIKEEKKAEGPRLGQPMMMGGGPRPGAQQSGTGSKGGMV
                     ARREDRIWVLENGKPKALVVKAGITDGQFTEVSGEGLQEGLEVLIGVENTKQAAGAAP
                     LGGPGGRR"
     gene            1813..3030
                     /locus_tag="VFV26_03360"
     CDS             1813..3030
                     /locus_tag="VFV26_03360"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845229.1"
                     /translation="MRFLEFIKLALFAITRNKMRAFLTMLGIIVGVGAVIAMIGIGEG
                     SKRASIALIQNMGSNMLTIFPGSGGNRFGPSAMGSADILLESDVPLIQQELAQSSVVA
                     ASAHVQTTRPVIYQNSNYVTQIQGTGPEFLQIRGWEVESGRFFTDTEVRGMAKVCVIG
                     QTVKDNLFPNGEDPVGQTVRVGALPFQVVGVLEKKGAGMWGDQDDLIVGPYTTVMRKI
                     MGRDKIQRIMVSAQEGKAELAEAEVTALLRQRMKVAPKDENPFQIRKQDDIVQMQTQQ
                     AGILTALLAVAASISLVVGGIGISNIMLVSVTERTREIGIRRALGATQRSILWQFLIE
                     AVVLSVFGGIIGIAFAYSAVFILQKFQVPAVTESWAVVLGLGFSGVVGVAAGFLPAVK
                     AAKLDVIDALRYE"
     gene            3037..4287
                     /locus_tag="VFV26_03365"
     CDS             3037..4287
                     /locus_tag="VFV26_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845230.1"
                     /translation="MDEPAAIPHDPYAALRDGSYRWFIASLGLATLGLQMQGVVVGWQ
                     VYDRTGDPLALGLVGLSEALPFLALALFGGHAADRMDRLRICMAAILGLVLCSGLLWA
                     FTWRFPSGPLAKAVWPIYGIIFLTGLVRAFYRPANMALGTDLLPKALYANGSTWRVSV
                     FHGGMVAGPALGGLVYAWRGPAMAHFLVMALLAGGLLGLFFIRHTPRPVAPRRGSILA
                     SLGEGLRFVFSQRLLLGAISLDLFAVLFGGAVAVLPVFAKEVLQVGPQGLGALRAAPA
                     VGSVLMGISLAHLPPLRRAGRTLLLCVGAFGVCMIAFALSRSFLLSLLLLAASGAVDN
                     VSVVLRATLLQSLTPAHMLGRVSSVNQVFIGSSNEIGAFESGVAARLLGLVPSVVFGG
                     CMTLLVVAATAWKVPGLRKMDRIG"
     gene            4417..>5715
                     /locus_tag="VFV26_03370"
     CDS             4417..>5715
                     /locus_tag="VFV26_03370"
                     /inference="COORDINATES: protein motif:HMM:NF019974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4845231.1"
                     /translation="MFFDLLHVRIRIKLLGLVLLPVVGGALLSGLVVAEQTRLLKRMQ
                     RVRSASSLSVSVGNMVHALQAESSGTALFLGSGGTLPSAMVAGRDGADRERVALNAAL
                     SETGPEFRTLFPAQVKDGSRLKDLRRRADRHAASLELIDDYVREVDALLRVQNQLMLP
                     VAGTPLEGRFQAFATLIRAKESAGLEGAILAHVFSRGTLDVATQERFLSLRDAQKAQG
                     EAFLSSAPEAARDDYRRALAGPFSADLQRMRDLVQAGQVIQDPEVWARLASAELLALK
                     GVQDRMSQGLLTDAQGLERSARTKGWFLAAGFSVFGLVVLLWTWRATVLITEPIHALA
                     DGMARMQEGDLSIQLPVHSYDETGRMTGTFNAMSAHLRELVRALQGHAARVTSGAGRL
                     STSAEQVSGATQQLAKSSRVQREASEEVVFAVTQLQATVVQ"
BASE COUNT          836 a         1956 c         1997 g          926 t
ORIGIN      
        1 cggcggtcca cgcgcccctg gccggcgcca cggtgctggt ctgcgcggcc atcgtcctgg
       61 caggtggctt cctccagttc gccctggtgg atggcttcgc caagcgggcc ctggtggaag
      121 gcctcggcct gatccgctag gcgtcgtttt tcccactcaa ccgggaacct tctgtggcgg
      181 tccatacatc gttatgcgaa ggttgaaggc tgggccccgc ccggcccttt gagagtggag
      241 cgcgccgtca tgaagcggaa tacctggatc ggccttggca tcggcgtcgc ggtggtggcg
      301 gggggaaccg cctacgtcct cacccggccc aaggacgagg tgaagtggcg catggccaag
      361 ctggacaagg gcggcatcac ccagcgcatc aacgccaccg gggccgtgag ccccgtggtg
      421 caggtggccg tgggcaccca ggtgtcgggc gtcatctcgg ccctctacgt ggactacaac
      481 agcatcgtga agaagggcca gctcatcgcc cagatcgatc ccaccatctg ggagacccag
      541 ctcagggacg ccgaggcggg cctggagcgg gccaaggcca ccatggaaga cgccaagcgc
      601 cagtacgacc gggccaggcg ccttgccgcg gaaaagctgc tgtcggatca ggacctggaa
      661 gcgcggctgg tggcccacca gacctccctc gccagcttcg agaacgccaa ggcctccctg
      721 gcccgggccc gggccaacct cggctactgc aacatcaccg cgcctgtgga tggcgtggtc
      781 atttcgcgct tggcggacgt gggccagacg gtggcggcca gcttcagcac gccgaacctg
      841 ttccagatcg cccaggacct gtcgaagatg aaggtccagg tttccatcgg cgagtccgac
      901 atcgacgagg tgaaggtggg ccagcgggcc atgttcaccg tggacagcct gccggacaag
      961 cagttcgcgg ccaccgtgag cctggtgcgc caggagccca tcaccaccca gaacgtggtg
     1021 aactacgtgg tggaactcat cgtgccgaac gagccgctgc cgggctccga cgagggcggc
     1081 caggcggtcc ccgggcggcc cggatcccca gatgcaggga agggcgccgc gcccgaggcc
     1141 gcgccggatc ccgagaaggc ctgggcgcgc ctgaaggacc gcatggaggc ccagggcgtc
     1201 accaaggagc agttcctgaa gcgcttcaag gagcgcatgg ccagccagac cccgggcgcg
     1261 gcaggccggt cccgcggcat ggccgcgacc aatcaggccc cggccggcga tcccagggcc
     1321 ctggcccggg ttccgggcgg cgccagccag ctgggcggcc ccaagttcat ggggtccctg
     1381 gccctccgct cgggcatgac cgccaacgtc accatcatca ccaaccagcg ccgggatgtg
     1441 atgcgggtgc ccaacgcggc cctgcgcttc aaccccgcgg ccttcatcaa ggaggagaag
     1501 aaggcggagg ggccgcggct gggccagccc atgatgatgg gcggcggccc ccggcccggg
     1561 gcccagcaga gcggcaccgg gagcaagggc ggcatggtgg cccggcggga ggaccgcatc
     1621 tgggtgctgg agaacggcaa gcccaaggcc ctcgtggtga aggccggcat cacggacggg
     1681 cagttcaccg aggtctccgg cgagggactt caggagggcc tggaggtcct catcggtgtc
     1741 gagaacacca agcaggccgc gggggccgcg ccgctcggcg gccctggcgg acggcgctag
     1801 cccggggggt ccatgcgatt cctggaattc atcaaactcg ctctctttgc catcacccgg
     1861 aacaagatgc gggccttcct caccatgctc ggcatcatcg tgggcgtggg ggcggtcatc
     1921 gccatgatcg gcatcggcga aggctccaag cgagcctcca tcgcgttgat ccagaacatg
     1981 ggctccaaca tgctgaccat cttcccgggc agcggcggta accgcttcgg cccgtccgcc
     2041 atgggcagcg ccgacatcct gctggaaagc gatgtgcccc tgatccagca ggagctcgcc
     2101 cagagcagcg tggtggccgc ctccgcccac gtgcagacga cgcgccccgt catctaccag
     2161 aacagcaact acgtgaccca gatccagggc acgggccccg agttcctcca gatccgcggc
     2221 tgggaggtgg agagcggacg gttcttcacg gatacggaag tgcgcggcat ggccaaggtc
     2281 tgcgtcatcg gccagaccgt gaaggacaac ctcttcccca acggcgagga tcccgtgggc
     2341 cagaccgtgc gcgtgggcgc gctgcccttc caggtggtgg gcgtgctgga gaagaagggc
     2401 gccggcatgt ggggcgacca ggacgacctc atcgtggggc cctacaccac ggtcatgcgc
     2461 aagatcatgg gccgcgacaa gatccagcgc atcatggtga gcgcccagga gggcaaggcc
     2521 gagctggccg aggcggaggt caccgcgctc cttcgccagc gcatgaaggt ggcgcccaag
     2581 gacgagaacc ccttccagat ccgcaagcag gacgacatcg tgcagatgca gacccagcag
     2641 gctggcatcc tcacggccct gctggccgtg gccgccagta tctccctggt ggtgggcggc
     2701 atcggcatct ccaacatcat gctggtgagc gtcaccgagc gcacccggga gatcggcatc
     2761 cgccgcgccc tgggcgccac ccagcgcagc atcctctggc agttcctcat cgaggcggtg
     2821 gtgctgtccg tcttcggcgg catcatcggc atcgccttcg cctattcagc cgtcttcatc
     2881 ctccagaagt tccaggtgcc ggcggtgacc gagtcgtggg ccgtggtcct gggcctgggc
     2941 ttctccgggg tcgtcggcgt ggccgcgggt ttcctgcccg ccgtgaaggc cgcgaagctt
     3001 gatgtgatcg acgccctgag atacgagtga tgagttgtgg atgagcccgc agctattccc
     3061 cacgatccct acgcggccct gagggacggc agctaccgct ggttcatcgc gtcgctgggc
     3121 cttgccaccc tggggctcca gatgcagggc gtggtggtgg gctggcaggt ctacgaccgc
     3181 accggagacc ctctggccct gggcctggtg ggcctgtccg aggcgctgcc cttcctggcc
     3241 ctggcgctct tcggcggcca cgcggcggat cgcatggacc gcctgcgcat ctgcatggcc
     3301 gccatcctgg ggctcgtcct ctgttcgggc ctgctgtggg ccttcacctg gcgcttccct
     3361 tccgggcccc tggccaaggc ggtctggccc atctacggca tcatcttcct cacgggcctt
     3421 gtgcgggctt tctaccgccc cgcgaacatg gccctgggca cggatctgct gcccaaggcc
     3481 ctctatgcca acggctccac ctggcgggtg tccgtcttcc acgggggcat ggtggccggt
     3541 ccggccctgg gcggccttgt ctacgcctgg cgcggcccgg ccatggccca cttcctggtg
     3601 atggccctcc tggccggcgg cctgctgggc ctgttcttca tccgccacac gccccggccg
     3661 gtggcgccgc gccggggttc gatcctggcg agcctgggcg aaggcctgcg cttcgtgttc
     3721 tcccagcggc tgctgctggg ggccatcagc ctggacctct tcgccgtgct cttcggcggg
     3781 gcggtggcgg tgctgccggt gttcgccaag gaagtcctgc aggtgggccc gcagggcctc
     3841 ggcgccctgc gcgccgcgcc ggccgtgggt tcggtgctca tgggcatcag cctggcccac
     3901 ctgccgcccc tgcgccgggc ggggcggacg ctgctgcttt gcgtgggggc cttcggcgtc
     3961 tgcatgatcg ccttcgccct gagccgcagc ttcctgctga gcctgctcct gctggccgcc
     4021 agcggggctg tggacaacgt cagcgtggtg ctgcgcgcca cgctgctgca gtccctcacg
     4081 cccgcgcaca tgctgggccg cgtgtcctcg gtgaaccagg tgttcatcgg atcgagcaac
     4141 gagatcggcg ccttcgaaag cggcgtggcg gcgcggctcc tgggcctggt gccctccgtg
     4201 gtgttcgggg gctgcatgac cctgctggtg gtggccgcca ccgcgtggaa ggtgccgggg
     4261 ctgcggaaga tggaccgcat cggctgatcc tcccggcaag cttggcttgg ggccaggttg
     4321 ggtgatttcc gtcaaattgg actcaaaggt cgcctgaatg caccccggct gttccacact
     4381 attgggatcc gccggttccg gtcttttggg tgatgcatgt tctttgacct tctccacgtt
     4441 cgaatccgca tcaagctcct cggcctggtg ctcctgcctg tggtgggcgg cgccctgctg
     4501 tccggcctgg tggtggccga gcagacccgg ttgctcaagc gcatgcagcg ggtgaggtcg
     4561 gcctccagcc tctcggtctc ggtggggaac atggtccatg cccttcaggc ggaatcctcg
     4621 gggacggccc tcttcctcgg cagcggaggg accctcccat ccgccatggt cgccggccgg
     4681 gatggcgcgg accgcgaacg ggtggccctg aatgcggcct tgtcggagac cgggcctgaa
     4741 ttcaggaccc tgttcccggc ccaggtcaag gatgggagcc gcctcaagga tctgcgccgc
     4801 cgggcggacc ggcatgccgc cagccttgag ctgatcgacg actatgtgcg ggaggtggac
     4861 gccctcctcc gggtgcagaa ccagctcatg ctgccggtgg ccggaacccc cctggaaggc
     4921 cggttccagg ctttcgcgac cctgatccgg gccaaggaat ccgcgggcct ggagggggcc
     4981 atcctggccc atgtcttctc ccggggcacc ctggacgtgg ccacccagga gcggttcctg
     5041 tcgctgcggg acgcccagaa ggcccagggt gaggccttcc tctcttccgc gcccgaggcc
     5101 gcgcgggacg actaccgccg ggccctcgcc gggcccttca gcgccgatct gcagcgcatg
     5161 cgcgacctgg tccaggccgg ccaggtgatt caggatccgg aagtctgggc acggctggct
     5221 tcagcggagc tcctggccct caagggcgtc caggaccgca tgagccaggg ccttctgacg
     5281 gacgcccagg gcctggaacg gagcgcccgc accaagggct ggttcctggc ggcaggtttc
     5341 agtgtctttg gcctggtggt gctgctctgg acctggcggg ccacggtgct gatcacggaa
     5401 cccatccacg ccttggcgga cggcatggcc cgcatgcagg agggcgacct gagcatccag
     5461 ctgccggtcc acagctatga cgagaccggc cgcatgaccg ggaccttcaa tgccatgagc
     5521 gcccatctgc gggagctggt ccgggccctc cagggccatg cggcgcgggt caccagcggg
     5581 gccggaaggc tgtccaccag cgccgagcag gtctccggtg ccacccagca gctggcgaag
     5641 agcagccggg tccagcggga ggcttccgag gaggtggtct tcgcggtgac ccagctccag
     5701 gccacggtcg tccag
//
LOCUS       DASUDT010000160         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2040902, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000160 DASUDT010000000
VERSION     DASUDT010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040902"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..692)
                     /locus_tag="VFV26_03375"
     CDS             complement(228..692)
                     /locus_tag="VFV26_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845232.1"
                     /translation="MQEVQIKAPKHEFTLLCDDIRQEMGGKTSLMGLYDHHIVVPQVP
                     FTLPKVCFYTRFSRMDGQFKFGFSIVSPTGDRKDVIRDSDVQIPDGAKEGTFNVIASP
                     FEVSGEGVYEVIIALTKGADRFEYVYKFAISDASRLQAEYEKAMAEAGQGGN"
     gene            792..>2192
                     /locus_tag="VFV26_03380"
     CDS             792..>2192
                     /locus_tag="VFV26_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HEX4845233.1"
                     /translation="MRHWFWILWITLGLQAQEARIQILGTTDMHGHVMAEDTYSLQPA
                     NLGWAKIATLIRRQRALNPATVLVDCGDTLQGEPINYVRNTLRRDLPEPSVAIMNALG
                     YSAMAVGNHEFDFGLEILREVEKQAKFPFLSANTLDAKGKPGFLSHSIVTVAGVRVAL
                     VGFTTPRIPAMTEPRNYAGLRFQDIVAAARELVPRLRGADKADVVVALVHSGLGKVEG
                     REGDENAALRLADQVPGLDVILTGHTHLAIQTEHKGIPILQAQAHGRALAVVDLNLRQ
                     EQGRWRVAAAQGRLVSPEADTPVDPEVLNLTADLRAATDRYLDTAATNLLVDLDSRWS
                     RMEDTPLMQLIHQAQRQATGAQLSAAASPGARIFVPKGPTSVRQFYALSPYESQVARI
                     RISGAQLRAYLEHAARHYTYSWEPELYNREVPLHDFDMVDGVAYALNLGKPAGSRVAN
                     LSFQGQPVKADQSFTLA"
BASE COUNT          368 a          738 c          746 g          340 t
ORIGIN      
        1 gagggtgagg tggcccaccc ccgcccgggc cagccagggg gcgatgaccg accccagggc
       61 ccccaggccg agcacggcca cgcgcttggc gcgcagggcc tcgtcggctt cgcgtccgag
      121 aaaaatgcgc tgcttggcgt accggtcggc catggcgtcc ccgcttccag tctaaaagca
      181 acgcggcgcc cgggtgggcg ccgcgcaggg aaaagaaggg tgaaggccta gttgccgccc
      241 tggccagcct cggccatggc cttctcgtac tcggcctgga ggcggctggc atcggagatg
      301 gcgaacttgt agacgtactc aaagcggtcg gcacccttgg tgagggcgat gatcacttca
      361 tagacgccct cgccgctcac ctcgaagggg ctggcgatga cgttgaaggt gccttccttg
      421 gcgccgtcgg ggatctgcac gtcgctgtcg cggatcacgt ccttgcggtc gccggtgggg
      481 ctcacgatgg agaagccgaa cttgaactgg ccgtccatgc gggagaagcg ggtgtagaag
      541 cacaccttgg gcagggtgaa gggcacctgg ggcaccacga tgtggtggtc gtacaggccc
      601 atcagcgagg tcttgccgcc catctcctgg cggatgtcgt cgcaaagcag cgtgaattcg
      661 tgcttggggg ccttgatctg gacttcttgc atgagggctc cgaaagagag gtcatccttg
      721 ggtgaaggga aagtttaccc ttgaagtcgg ccccttccaa ccctgcgttg gcggagcgcc
      781 ccggaggctg catgaggcat tggttctgga ttctgtggat caccctgggg ctccaggccc
      841 aagaggcccg gattcagatt cttgggacca cggatatgca cgggcatgtc atggcggagg
      901 atacctacag cctccagccc gcgaacctgg gctgggccaa gatcgccacg ctgatccgcc
      961 gccagcgggc cctgaacccc gccacggtcc tggtggactg cggcgacacg ctccagggcg
     1021 agcccatcaa ctatgtgcgg aacacgctcc gccgggacct gccggagccc agcgtcgcca
     1081 tcatgaacgc cctgggctac tcggccatgg ccgtgggcaa ccacgagttc gatttcggcc
     1141 ttgagatcct gcgcgaggtg gagaagcagg cgaagttccc cttcctgtcg gccaacaccc
     1201 tggatgccaa ggggaaaccc ggcttcctgt cccacagcat cgtgacggtg gcgggcgtcc
     1261 gcgtggccct ggtgggcttc acgacgcccc ggatccccgc catgacggaa ccccggaatt
     1321 atgcggggct ccgcttccag gacatcgtgg cggccgcccg ggagctggtg ccccgcctgc
     1381 ggggggcgga caaggccgat gtggtggtgg ccctggtcca ctcgggcctg ggaaaggtgg
     1441 agggccgcga gggcgatgaa aacgccgccc tgcgactggc ggaccaggtg ccgggcctcg
     1501 acgtcatcct cacgggccac acccacctgg ccatccagac cgaacacaag ggcattccca
     1561 tcctccaggc ccaggcccat ggacgggccc tggcggtggt ggatctgaac ctgcggcagg
     1621 agcagggccg ctggcgcgtg gccgcggccc agggccgcct ggtcagcccg gaggcggata
     1681 cgccggtgga cccggaagtg ctgaacctga cggcggatct ccgcgccgcc acggaccgct
     1741 acctggatac ggcggccacg aacctgctgg tggatctgga cagccgctgg tcccgcatgg
     1801 aggacacgcc gctcatgcag ctgatccacc aggcccagcg ccaggccacg ggcgcccagc
     1861 tgtccgccgc cgccagcccc ggcgccagga tctttgtccc caagggcccc accagcgtgc
     1921 ggcagttcta tgccctgtcg ccctatgaga gccaggtggc gcgcatccgc atcagcggcg
     1981 cccagctcag ggcctacctg gaacacgccg cgcgccacta cacctacagc tgggagccgg
     2041 aactgtacaa ccgcgaggtg cccctccacg atttcgacat ggtcgacggg gtggcctatg
     2101 cccttaacct gggcaagcct gcgggcagcc gagtggcgaa cctcagcttc caggggcagc
     2161 ccgtgaaggc cgaccagtcc ttcaccctcg cc
//
LOCUS       DASUDT010000161         2186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1024488, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000161 DASUDT010000000
VERSION     DASUDT010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024488"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VFV26_03385"
     CDS             <1..300
                     /locus_tag="VFV26_03385"
                     /inference="COORDINATES: protein motif:HMM:NF013406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015655 - alanine:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0032328 - alanine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HEX4845234.1"
                     /translation="YLMRGRHPRWGIAAIRVGLLGMTFFGAVRTAGLMWGLGDIGVGL
                     MAWLNLIAILLLARTGIKVLRDYEAQVEAGTPLAFDPDKLGIPNTVCWKPEDRQG"
     gene            297..869
                     /locus_tag="VFV26_03390"
     CDS             297..869
                     /locus_tag="VFV26_03390"
                     /inference="COORDINATES: protein motif:HMM:NF037625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845235.1"
                     /translation="MTDRRQERLRSHRRALLLRAVEGAEARGLSGLVLEELARVEGLP
                     LRSLGPEPEDLFFPDEVDLREAFAGILEEAGLLEATQAWARHLQEEDDLWRRRLELCA
                     REPRLALRRAALDEAWRELLAAHFLRWGAAGPAGERHARVEADLALAALRSAERRWLE
                     GGGRPVLPVLAHEALAVLWPALYTHARKAR"
     gene            complement(870..>2186)
                     /locus_tag="VFV26_03395"
     CDS             complement(870..>2186)
                     /locus_tag="VFV26_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEX4845236.1"
                     /translation="LKKSESGQKVLDEAGEALKVQVLREEDVDDEVLDLERLTDKDEA
                     PIVRLVDTTIFNALQRRASDIHLETTSTGFQIKYRIDGSLYPAADPIDRRFASPIISR
                     IKVMSELDIAEKRKPQDGRFKLKVRGRAIDFRVSIMPTIHGEDAVIRILDKENLTEEF
                     QALSLEILGFSDHELKRLRRFAREPYGMFLVTGPTGSGKTTTLYAVLSEIKAPEDKII
                     TIEDPVEYQLEGVTQIPVNEKKGLTFALGLRSILRHDPDKILVGEIRDPETAQIAIQS
                     ALTGHLVFTTVHANNVLDVLGRFQHMGVEVHNFVSSLNCILAQRLVRVLCPKCKRPAA
                     KPTPHELEENGVDEAWLRGATLFDRVGCVDCHGTGFRGRQAIIEFMGLNDEIRELLVQ
                     RAPTREVKAAARRSGMQFLRESAIEKVRAGITTFAEINKVTFREGA"
BASE COUNT          290 a          708 c          818 g          370 t
ORIGIN      
        1 tacctgatgc gtggccgcca ccccaggtgg ggcatcgccg ccatccgggt gggtctgctg
       61 gggatgacct tcttcggggc cgtgcgcacc gccgggctca tgtggggcct gggcgacatc
      121 ggcgtgggcc tcatggcctg gctgaacctc atcgccatcc tgctgctggc ccgcacgggc
      181 atcaaggtgc tgcgggacta cgaggcccag gtggaggccg ggacgcccct ggccttcgat
      241 ccggacaagc tgggcatccc caacaccgtc tgctggaagc ccgaggaccg ccagggatga
      301 cggaccgccg ccaggagcgc ctgcggtccc atcgccgggc cctgctgctg cgggcggtgg
      361 aaggggcgga ggccaggggc ctgtccggcc tcgtcctcga ggagctggcc cgggtggagg
      421 ggcttcccct ccgcagcctg ggaccggagc ccgaggacct cttctttccg gacgaggtgg
      481 atctgcggga ggcgttcgcc gggatcctgg aagaggcggg gctgctggag gcgactcagg
      541 cctgggcccg gcacctccag gaagaggacg atctgtggcg ccgccgcctg gagctctgcg
      601 cccgggaacc ccgcctcgcc ctgcgccggg cggccctgga cgaggcctgg cgggagctgc
      661 tggccgccca cttccttcgc tggggggcgg cgggtcccgc cggggaacgg catgcacggg
      721 tggaggcgga cctggccctg gcggctctcc ggagcgccga gcggcgctgg ctggagggcg
      781 gcggccggcc cgtccttccc gtgctggccc acgaggccct ggccgtcctc tggcccgcgc
      841 tctacaccca cgcccggaaa gcccgctgat caggcccctt cgcggaaggt caccttgttg
      901 atctcggcga aggtcgtgat gcccgcacgg accttttcga tggcgctctc ccgcaggaac
      961 tgcatgccgc tgcggcgggc ggcggccttc acctcgcggg tgggggcgcg ctggacgagc
     1021 agctcgcgga tctcgtcgtt gaggcccatg aactcgatga tggcctggcg gccgcggaag
     1081 ccggtgccgt ggcagtccac gcagcccacc cggtcgaaga gggtggcgcc gcggagccag
     1141 gcctcgtcca cgccgttctc ctccagctcg tggggcgtgg gcttggcggc agggcgcttg
     1201 cacttggggc agagcacccg caccagccgc tgggccagga tgcagttcag ggaggagacg
     1261 aaattgtgga cctccacgcc catgtgctgg aagcggccca gcacgtccag cacgttgttg
     1321 gcgtggacgg tggtgaagac caggtgccct gtgagggcgg actggatggc gatctgggcc
     1381 gtctcgggat cgcggatctc gcccacgagg atcttgtcgg gatcgtggcg caggatggag
     1441 cggaggccca gggcgaaggt gaggcccttc ttctcgttca cggggatctg ggtgacgccc
     1501 tcgagctggt actcgacggg atcctcgatg gtgatgatct tgtcctcggg ggccttgatc
     1561 tcgctcagca cggcgtagag ggtggtggtc ttgccggatc ccgtggggcc cgtcaccagg
     1621 aacatgccgt agggctcgcg ggcgaagcgg cgcaggcgct tcagctcgtg gtcggagaag
     1681 cccaggatct ccaggctgag ggcctggaat tcctccgtga ggttctcctt gtcgaggatg
     1741 cggatcaccg cgtcctcgcc gtggatggtg ggcatgatgc tcacgcggaa atcgatggcg
     1801 cggccgcgga ccttgagctt gaagcgcccg tcctggggct tgcgcttctc cgcgatgtcc
     1861 agctcggaca tgaccttgat gcggctgatg atgggcgagg cgaagcggcg gtcgatggga
     1921 tcggccgccg ggtagaggct gccgtcgatg cggtacttga tctggaagcc cgtggacgtg
     1981 gtctccagat ggatgtccga cgcccgtcgc tggagggcgt tgaagatggt ggtgtccacc
     2041 aggcgcacga tgggcgcctc gtccttgtcg gtgagccgct ccaggtcgag cacctcgtcg
     2101 tccacatcct cctcccggag cacctggacc ttgagggcct cgcccgcctc atccagcacc
     2161 ttctggccgg attccgactt cttgag
//
LOCUS       DASUDT010000162         4915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1356034, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000162 DASUDT010000000
VERSION     DASUDT010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356034"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VFV26_03400"
     CDS             complement(<1..455)
                     /locus_tag="VFV26_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845237.1"
                     /translation="MNFLRPLAALCLGLTLQAQAVDLQATGGGELKIGTTTYRFELKA
                     LFTAPPKGGLPGAFRIQGQLIPTGPGQPFDLDLAVLKTGVLYMLRIDRKGADSYPDSW
                     AATIKTRTRPVSLQDGPGGRVEVECLGTLTGIIARKPRTAAWQGRIWAT"
     gene            512..973
                     /locus_tag="VFV26_03405"
     CDS             512..973
                     /locus_tag="VFV26_03405"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4845238.1"
                     /translation="MTRVLFQTDKGDINLELFPKEAPGTVANFVKLIEAGFYDGLAFH
                     RVIPDFVIQGGCPNTKAGASGMPGTGGPGWKIKCETAGNPHKHKLGALSMAHAGPNTG
                     GSQFFICNGSAPSHLDGVHTVFGQCASDADIKVVQAIKANDRIVKATVVEA"
     gene            1044..1607
                     /locus_tag="VFV26_03410"
     CDS             1044..1607
                     /locus_tag="VFV26_03410"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005934810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX4845239.1"
                     /translation="MDTKVRCGWCGTDPLYVAYHDEEWGVPQHDDLRLFEKLVLEGAQ
                     AGLSWITILRKREAYRRVFHGFDPVKVAAMTDAELARILADPGIVRNRLKVFSARENA
                     RAFLAVQREFGSFDAFLWSFVNGRPRVNQPRTLGEIPAVTPEAEALSRALKKRGFKFV
                     GPTIMYAYMQSMGLVDDHLTTCWRKPA"
     gene            1938..3839
                     /gene="metG"
                     /locus_tag="VFV26_03415"
     CDS             1938..3839
                     /gene="metG"
                     /locus_tag="VFV26_03415"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX4845240.1"
                     /translation="MSKPFYITTPIYYVNDRPHIGHTYTTVLADVIARFHRMRGEEVY
                     FLTGTDEHGQKVEKAAAARGITPKQLADEVVANYTELWKAMGMTHFRFIRTTDEDHKA
                     QVQRLFKRLLDKGDIYKATYKGLYSVSDEAYVTETQAKELQAQGLAHQLVELEEETYF
                     FRLSAYQDQLLKHFEEHPEFVQPDFRFNEVKRFVEGGLQDLSISRTSISWGIPVPGDE
                     KHVIYVWFDALLNYLTGCPANSWPPDLQLVGKDILRFHAVYWPAFLMAAGMFQPTTIL
                     AHGWWLMGDDKMSKSKGNVVRPDTLLRFGNDALRFYFMRDMQVGHDRGFAFEGFMDRL
                     NADLANGLGNLASRTLSMIQRYRGGVVPMPAVMDDLDQQMATQLLEVFPEYLEKARAN
                     DFHGALDALWTYLRALDGYIVKAEPWKLAKDPANDPKLDAVLANLYRALRATALLVAP
                     VMPELAQSLWESLGHDSKVAERTFHGFALDGPAIGPIGEPRPLFQRIDKEKEMSELVP
                     AEVSAEIKPALDVPEIRETVDADTFFKVDLRVGRILEAERVPKSDKLIKMKVDIGLEQ
                     RTIVGGIGKAYEPADLLNRLVVVVANLAPRKLMGIESHGMLLAASDNASKPYLVAPPD
                     DAQPGFLVK"
     gene            3836..4177
                     /locus_tag="VFV26_03420"
     CDS             3836..4177
                     /locus_tag="VFV26_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845241.1"
                     /translation="MKRPVFSFEAELLTDAPFDHAAARLRREGPQAFRCLRPLSAWGA
                     PEEGGGRLTLGWNRRVAGAEEAGTLVVSLDPKGVHLRLEGRMKGWSAFLLFGLLRWRT
                     DRLLDRFVEEL"
     gene            4174..4515
                     /locus_tag="VFV26_03425"
     CDS             4174..4515
                     /locus_tag="VFV26_03425"
                     /inference="COORDINATES: protein motif:HMM:NF015893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HEX4845242.1"
                     /translation="MKAVLWMKSSCTTCRNAKAKLAELGIEVEIRDYFKRPLEAPELE
                     SLLPVDPTPMLGTKSPKYKELGLKDRQLAKAEAIALMVQDNNLLKRPILVHPRGVIIG
                     FDSVAYEKLVP"
     gene            4529..>4915
                     /locus_tag="VFV26_03430"
     CDS             4529..>4915
                     /locus_tag="VFV26_03430"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX4845243.1"
                     /translation="MRFYSWNVNGFRSVLKKGFMDWLEETEPDVLSLQEIRSEWEEVD
                     LGVRRQLESAYDVCWFPATSKKGYAGSATLSRKDLGFSHAKGLGIDGYDAEGRMIVSR
                     KDGLVFIGGYFPNASQGLVRLPFKRQF"
BASE COUNT          876 a         1622 c         1623 g          794 t
ORIGIN      
        1 aaggtggccc agatgcggcc ctgccaggcc gccgtgcgcg gcttgcgggc gatgatgccc
       61 gtcagggtcc ccaggcattc gacttccacc cggccgccgg ggccgtcctg cagtgacacg
      121 ggccgggtgc gggtcttgat cgtggcggcc cagctgtccg ggtaggaatc ggcacctttc
      181 cggtcgatgc ggagcatgta gaggacgcca gtcttcagca ctgcgagatc caggtcgaag
      241 ggctgccctg gtccagtggg gatcagttgg ccctggatcc ggaacgcgcc cggaaggccg
      301 cctttgggag gggccgtgaa gagggccttg agttcgaagc gataggtggt ggtgccgatt
      361 ttcaattccc cgccgccggt ggcttggagg tcgacggctt gggcctggag cgtgaggcca
      421 aggcagaggg ctgccagggg gcggaggaag ttcatgctga ctccgggtgg gtgggcctct
      481 attctgaagg attgaacctg agaggtgaac catgacccgc gtgctcttcc agaccgacaa
      541 gggcgacatc aacctggaac tcttcccgaa ggaggctccc gggaccgtgg ccaacttcgt
      601 gaagctcatc gaagccggct tctacgatgg cctggccttc caccgcgtca tccccgactt
      661 cgtcatccag ggcggctgcc ccaacaccaa ggccggcgct tcgggcatgc ccggcaccgg
      721 cggccccggc tggaagatca agtgcgagac cgcgggcaac ccccacaagc acaagctggg
      781 cgccctctcc atggcgcatg cgggtccgaa cacgggcggc agccagttct tcatctgcaa
      841 cggcagcgcc cccagccacc tggatggcgt gcacacggtg ttcggccagt gcgcctcgga
      901 tgccgacatc aaggtggtgc aggccatcaa ggccaacgac cgcatcgtca aggcgacggt
      961 ggtggaggct taggcttcct catgttcatc cgaaaaacag ggcggcgttg ccgccctgtt
     1021 tttcgtaggg gagggacgaa gggatggaca cgaaggttcg ctgcggatgg tgcgggacgg
     1081 atccactgta cgtggcctac cacgacgagg agtggggcgt gccccagcac gacgacctcc
     1141 gcctcttcga gaagctggtc ctggaagggg cccaggcggg gctcagctgg atcacgatcc
     1201 tccggaagcg cgaggcctac cggagggtct tccacgggtt cgaccccgtg aaggtggctg
     1261 ccatgacgga cgcagagctg gcccggatcc tggcggatcc gggtattgtc aggaatcgcc
     1321 tgaaggtctt ctcggcgcga gagaacgctc gggccttcct ggcggtgcag cgggaattcg
     1381 gcagcttcga cgcgtttctt tggtccttcg tgaacggcag gcccagggtg aaccagccca
     1441 ggaccctggg cgagatcccg gcggtgacgc ccgaggccga agccctgagc cgggcgctca
     1501 agaagcgcgg cttcaagttc gtggggccca ccatcatgta cgcctacatg cagtccatgg
     1561 gcctggtgga tgatcacctc accacctgct ggcgcaagcc agcctaggag cccatccaag
     1621 taatcgacag gggttgcatt gacggcaaag ggcctccagg cacggaggcg ggcgcagggc
     1681 ggtgcgggca caccgttcaa gcccaccgac acagcatggg ggccctttgc catcaaccct
     1741 tcgggctggg gcggcagccg tcgggatgct gcgtcaggct ccttgtcctt ggagccgcca
     1801 aggccttcgt cgccttcctt gcctccctcg gctggcgccc cagtgcaacc cctatccatt
     1861 acttggacgg gctcctagct cttttcgcga acgcggaaag cgccatggaa cgctagactg
     1921 gaggatccgg agcccccgtg tccaagccct tctacatcac cacccccatc tactacgtca
     1981 acgaccgtcc ccacatcggc cacacctaca ccacggtgct ggcggatgtc atcgcacggt
     2041 tccaccgcat gcgcggcgaa gaggtgtact tcctcacggg tacggacgag cacggccaga
     2101 aggtggagaa ggccgccgcg gcccggggca tcacgcccaa gcagctggcc gacgaggtcg
     2161 tggccaacta cacggagctg tggaaggcca tgggcatgac ccacttccgc ttcatccgca
     2221 ccacggacga ggaccacaag gcccaggtgc agcgcctctt caagcgcctg ctggacaagg
     2281 gcgacatcta caaggccacc tacaagggcc tctattccgt cagcgacgag gcctacgtca
     2341 ccgagaccca ggccaaggag ctgcaggccc agggtctcgc gcaccagctg gtggagctgg
     2401 aggaggagac ctacttcttc cgcctcagcg cctaccagga ccagctgctg aagcacttcg
     2461 aggagcaccc ggagttcgtc cagcctgatt tccgcttcaa cgaggtgaag cgcttcgtgg
     2521 aaggcgggct ccaggatctc tccatcagcc gcaccagcat cagctggggc attcccgtcc
     2581 ccggcgacga gaagcacgtc atctacgtgt ggttcgatgc gctgctcaac tacctcacgg
     2641 gctgccccgc caacagctgg ccgccggacc tccagctggt gggcaaggac atcctgcgct
     2701 tccacgccgt gtactggcct gccttcctca tggccgcggg catgttccag cccaccacca
     2761 tcctggccca cggctggtgg ctcatgggcg acgacaagat gtccaagagc aagggcaatg
     2821 tcgtccgtcc ggataccctg ctgcgcttcg gcaacgacgc cctgcgcttc tacttcatgc
     2881 gggacatgca ggtgggccac gaccgcggct tcgccttcga aggcttcatg gaccgcctca
     2941 acgccgacct ggccaacggc ctggggaacc tggcatcgcg caccctgagc atgatccagc
     3001 gctaccgcgg cggcgtggtg cccatgcccg ctgtgatgga cgacctcgac cagcagatgg
     3061 cgacgcagct gctggaggtc ttccccgagt acctggagaa ggcccgggcc aacgacttcc
     3121 acggcgccct ggatgcgctc tggacctacc tgcgggcact ggacggctac atcgtgaagg
     3181 ccgagccctg gaagctggcc aaggaccccg ccaacgatcc caagctggat gccgtgctgg
     3241 cgaatctcta ccgggccctg cgggccacgg ccctgctggt ggccccggtg atgccggagc
     3301 tggcccagtc cctctgggag agtctcggcc acgactccaa ggtggccgag cggaccttcc
     3361 acggcttcgc cctggacggc cccgccattg gtcccatcgg cgaacccagg cccctgttcc
     3421 agcgcatcga caaggagaag gaaatgagcg aactcgtccc cgcggaggtc tcggccgaaa
     3481 tcaagcccgc cctggatgtg ccggagatcc gcgagaccgt ggacgccgac accttcttca
     3541 aggtggacct gcgcgtgggc cgcatcctcg aagccgagcg cgtccccaag agcgacaagc
     3601 tcatcaagat gaaggtggat atcggcctgg agcagcgcac catcgtgggc ggcatcggca
     3661 aggcctacga gcccgccgac ctgctcaacc gcctggtggt cgtggtggcg aacctggcgc
     3721 cccggaagct catgggcatc gaaagccacg gcatgctgct ggccgccagc gacaacgcca
     3781 gcaagcccta cctggtggcg ccgccggacg acgcccagcc cggattcctc gtcaagtgaa
     3841 gcgccccgtc ttcagcttcg aggccgagct cctcacggat gcgcccttcg accacgcggc
     3901 tgcgcggctg cggcgcgagg gaccgcaggc cttcagatgc ctgcggccgc tgagcgcctg
     3961 gggagcaccc gaagaaggcg gtggccgcct gaccctgggc tggaaccgcc gggtggcggg
     4021 ggccgaggag gccggaaccc tggtggtgtc gctggatccc aagggcgtcc acctccgcct
     4081 ggaggggcgc atgaagggct ggtccgcctt cctgctgttc ggcctgctgc gctggcggac
     4141 ggaccggctg ctggatcgct tcgtggagga attgtgaagg cggtcctctg gatgaagtcg
     4201 agctgcacca cctgccggaa cgccaaggca aagctggcgg agctgggcat cgaggtggag
     4261 atccgcgact acttcaagcg gcccctggaa gcgccggaac tggagtcgct gctgccggtt
     4321 gaccccacgc ccatgcttgg caccaagagc cccaagtaca aggagctggg cctgaaggac
     4381 cgtcagctgg cgaaggccga ggccatcgcc ctgatggtgc aggacaacaa cctgctcaag
     4441 cggcccatcc tggtgcatcc ccgcggcgtg atcattggat tcgattccgt cgcctatgag
     4501 aagctggtgc cctgagggag aagaacccat gcgcttctac agctggaacg tgaacggctt
     4561 ccgctcggtc ctgaagaagg gcttcatgga ctggctggag gagaccgagc ctgacgtgct
     4621 ctccctccag gagatccgca gcgagtggga ggaggtggat ctgggcgtgc ggcgccagct
     4681 cgaaagcgcc tacgacgtgt gctggttccc cgccacgagc aagaagggct acgcgggttc
     4741 cgccacgctc tcgaggaagg acctgggctt cagccacgcc aagggtctcg gcatcgatgg
     4801 ctatgacgcc gaaggccgca tgatcgtgtc ccggaaggat gggctcgtct tcatcggcgg
     4861 ctacttcccc aacgcttcgc aagggctggt gcgcctgccc ttcaagcgcc agttc
//
LOCUS       DASUDT010000163         2326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_52723, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000163 DASUDT010000000
VERSION     DASUDT010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52723"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VFV26_03435"
     CDS             <1..658
                     /locus_tag="VFV26_03435"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4845244.1"
                     /translation="LESMRDRLLEAWSKGSAFDHGQVGALLRQQEEETHRLVELVRRS
                     NEPTVLPQEVALELDRLENLTYQHWTGDSRTLIEARDLDLLKIPKGSLSAAEREEIQS
                     HVTHTFRFLSQIPWTSELAGVPEIAWAHHERLNGKGYPRQLKEPDIPVQSKLMAVSDV
                     YDALTAADRPYKAAVSVERSLEILEQEAKVNLLDAEVLRIFLEAKIYERTLAHTRPAS
                     "
     gene            655..1485
                     /locus_tag="VFV26_03440"
     CDS             655..1485
                     /locus_tag="VFV26_03440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845245.1"
                     /translation="MIQDPLLIVDDDPDMRSSLLESLTGRGYSAEAAASADEALARMA
                     LRPFPVVLTDLHMPGGPTGLDLIASLKLRFPDTLCILITAYATLDTSIEALKRGAYDL
                     VQKPFRLSEVEVVLNRALEHARLLQKVAAYREELEGRILSRTWDLQQARREAIALCDL
                     SLQGLEAGTADAALAPLLDRLAARWAPEGLACYRRSADGSLVRVVQRGPRPLPDRIDR
                     PQPGPLAAPGLGYPEERLVPLGEAGWLYLGFRERSALSLADPEFLLLARHLELALRVR
                     "
     gene            1490..>2326
                     /locus_tag="VFV26_03445"
     CDS             1490..>2326
                     /locus_tag="VFV26_03445"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX4845246.1"
                     /translation="MRAHQLLWTGFGGLDAAAVDLPFTPGGLVLFARNLDPDPDTGPA
                     RCRALIDGLQARFGAGLPLAVALDQEGGPVSRLRPWVGATPPLRQIWNGGGAAACETW
                     GRLWGEGLRLLGFNVDFAPVVDLWDGHPGAGIGDRAASAHPAEAAAAAGAFLHGLEST
                     GVRGCLKHFPGLGGTTLDSHQGLPELADASRVDRNASAFTALAHPDRLVMVAHLRTPA
                     SGALPASLHRGSVVDNPWGIQGRFLPDDLEMGGCADWSWDDRVRLSLEAGHEWLLVCQ
                     TPG"
BASE COUNT          328 a          899 c          780 g          319 t
ORIGIN      
        1 cctcgaatcc atgcgggacc gcctgctgga ggcctggagc aagggcagcg ccttcgacca
       61 cggccaggtg ggggcgctgc tccgccagca ggaggaggag acccatcgcc tggtggagct
      121 ggtccggcgc agcaacgaac ccacggtgct gccccaggag gtggccctgg agctcgaccg
      181 cctggagaac ctcacctatc agcactggac cggggacagc cgcaccctca tcgaggcccg
      241 cgacctcgat ctgctgaaga tccccaaggg aagcctctcc gccgccgagc gggaggagat
      301 ccagagccac gtcacccaca ccttccgctt cctgagccag atcccctgga ccagcgagct
      361 ggccggggtg ccggagatcg cctgggccca ccacgagcgg ctgaacggca aaggctatcc
      421 ccgccagctg aaggaaccgg acatccccgt gcagagcaag ctcatggccg tgtcggacgt
      481 gtacgacgcc ctcaccgccg ccgaccgccc ctacaaggcc gccgtgagcg tggagcggag
      541 cctggagatc ctcgagcagg aggccaaggt caacctgctg gacgccgagg tgctgcgcat
      601 tttcctcgaa gccaagatct acgagcgcac cctggcccat acgaggcccg cctcatgatc
      661 caggatccgc tcctcatcgt ggacgacgat cccgacatgc gcagttccct gctggaatcc
      721 ctgacaggac ggggctactc cgccgaggcc gccgccagcg ccgacgaggc cctggcccgc
      781 atggccctcc ggcccttccc cgtggtgctc acggacctgc acatgcccgg cgggcccacg
      841 gggctggacc tcatcgccag cctcaagctg cgcttcccgg acaccctctg catcctgatc
      901 acggcctacg ccaccctgga caccagcatc gaggccctca agcggggcgc ctacgatctg
      961 gtgcagaagc cgttccgcct ctcagaggtc gaggtggtcc tgaaccgggc cctggagcat
     1021 gcccgcctcc tccagaaagt ggccgcctac cgggaggaac tcgaagggcg gatcctgagc
     1081 cggacctggg acctccagca ggcgcgccgg gaggccatcg ccctctgcga cctgtccctc
     1141 cagggcctgg aagccggcac ggcggatgcc gccctggccc ccctgctgga ccgcctggcc
     1201 gcccgctggg cgcctgaagg gctggcctgc taccgccggt ccgccgacgg ctcgctcgtc
     1261 cgtgtggtcc agcgcggacc caggcccctg cccgaccgca tcgatcggcc ccagcccggg
     1321 ccgctggccg ccccggggct cggctatccc gaggaacgcc tggtgcccct gggcgaggcc
     1381 ggctggctct acctgggctt ccgggagcgg tcggccctca gcctggcgga tccggaattc
     1441 ctgctcctgg cccgccacct ggaactcgcc ctccgggtaa ggtgagagca tgcgtgccca
     1501 tcagctcctc tggaccggct tcggcggcct cgatgcagcc gccgtggacc tgccgttcac
     1561 ccccggcggc ctcgtcctct tcgcccgcaa cctggacccg gatcccgaca ccggccccgc
     1621 ccgctgccgc gccctcatcg acgggctcca ggcccgcttc ggcgccggcc tgcccctggc
     1681 cgtggccctg gaccaggagg gtgggccggt gagccgcctg cgcccctggg tgggagcgac
     1741 gccgccgctg cggcagatct ggaacggggg cggcgctgcc gcctgtgaga cctggggccg
     1801 cctctggggc gagggcctgc gcctgctggg cttcaacgtg gacttcgcgc ccgtggtgga
     1861 cctctgggat ggccatcccg gcgcaggcat cggggaccgg gccgccagcg cccatcccgc
     1921 cgaggccgcc gcggcggccg gagccttcct ccacggactg gagtccaccg gcgtgcgcgg
     1981 ctgcctcaag cacttccccg gcctgggcgg caccaccctc gacagccacc agggcctgcc
     2041 cgagctcgcc gacgccagcc gggtggaccg caacgccagc gccttcaccg ccctggccca
     2101 tccggaccgg ctggtgatgg tggcccacct gcggacgccc gcttcgggcg ccctgcctgc
     2161 cagcctccac cggggttccg tggtggacaa cccctggggc atccagggcc gcttcctgcc
     2221 agacgatctg gagatgggcg gctgcgcgga ctggagctgg gatgaccgcg tgcggctgtc
     2281 tctggaggcc gggcatgagt ggctgctggt ctgccagacg cccgga
//
LOCUS       DASUDT010000164         3210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1797792, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000164 DASUDT010000000
VERSION     DASUDT010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797792"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VFV26_03450"
     CDS             complement(<1..732)
                     /locus_tag="VFV26_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4845247.1"
                     /translation="MSQSPLQPLDVAAIRQDFPLLARVLHGKPVIYLDSAVSGQMPLQ
                     VIERMARYEREEHTNVHRGVSTLSQEATDFYEAAREKVRKFIGAASVKEIVWTRGTTE
                     AINLVAQTFGRMTVKEGDEILLSAMEHHADIVPWQMLAQEKGATIKVIPMTDAGELIL
                     ESLDGLITERTKLVGVVHVSNVLGTVNPVKEIIARAHAKGVPVLVDGAQAVPHLKVDV
                     QDLDADFYVFSGHKLSGPTGIGVLYG"
     gene            complement(1019..2296)
                     /gene="sufD"
                     /locus_tag="VFV26_03455"
     CDS             complement(1019..2296)
                     /gene="sufD"
                     /locus_tag="VFV26_03455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEX4845248.1"
                     /translation="MTTVAAGSSLLADLLSAPRPAEWTLLREAAELRLAGRELPTTRE
                     EDWKYTDLKALAPISFRPAPEATVDISSHLLPEMVGTRQVFVNGRHASHASCASAVPA
                     GVRYFPMSHASEACHALGSVGNGAAKGLFEDLNTARFEDGAVILVPRNLKVALPLHLL
                     FITKAEAAAVFPRLLVVLERGAELELVEEHLGEGAYLSCPVVEIRVAEGAILRHERVQ
                     RESPEAFHIGTLHAEVAKGGQYHSRTLSFGARFSRQEPRVRLAEGAEATLDGLALLDG
                     AQVADTHSFLHHAEPSASSHQLHKCIVDGRARAIFNGQILVAPHAQGTDARQQSRNLL
                     LSDSARVDTKPQLEIYADDVKCSHGAAVGQLDPEELFYLQSRGLNADDARNLLTYGFA
                     ADVLTHVPVASLRRALRHLVMARTQAGSLGDLS"
     gene            complement(2293..3057)
                     /gene="sufC"
                     /locus_tag="VFV26_03460"
     CDS             complement(2293..3057)
                     /gene="sufC"
                     /locus_tag="VFV26_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEX4845249.1"
                     /translation="MLSIKNLTASINGTPVLKGIDLEIKAGEIHAIMGPNGSGKSTLG
                     KVLVGHPAYEVTGGEVLYEGRNLFELEPDVRARTGIFMGFQHPIEVPGVSNAAFLRLA
                     YNKKAEAEGRDELDPLEFDDFIREKIKLVSMREEFLDRSLNEGFSGGEKKRNEILQMA
                     VLEPKLAILDELDSGLDIDALRVLGDAVNKLQRPDRALLIITHFPRILETIQPQFVHV
                     LSGGRILKSAGKELAVELEERGYDWVLEEAAAGGAR"
BASE COUNT          494 a         1008 c         1148 g          560 t
ORIGIN      
        1 gccgtacagc acgccgatgc ccgtgggccc cgagagcttg tggccgctga acacatagaa
       61 gtcggcgtcg aggtcctgca cgtccacctt caggtggggc acggcctggg cgccgtccac
      121 cagcacgggc acgcccttgg cgtgggcgcg ggcgatgatc tccttcacgg gattcacggt
      181 gcccagcacg ttgctgacat gcaccacgcc cacgagcttc gtgcgttcgg tgatcagtcc
      241 gtcgagggat tccaggatca gctcgccggc gtcggtcatg gggatgacct tgatggtggc
      301 gcccttctcc tgggccagca tctgccaggg cacgatgtcg gcgtggtgct ccatggcgga
      361 caggaggatc tcgtcgcctt ccttcacggt catgcggccg aaggtctggg ccaccaggtt
      421 gatggcctcg gtggtgccgc gggtccagac gatctccttg acggaggcgg ccccgatgaa
      481 cttccgcacc ttctcgcggg cggcctcgta gaagtccgtg gcctcctggc tgagggtgct
      541 gacgccgcga tggacattgg tgtgctcttc gcgctcgtac cgcgccatgc gctcgatgac
      601 ctgcagaggc atctggccgc tcacggcgct gtcgaggtag atcacgggct tgccgtggag
      661 cacacgggca agcaggggaa agtcctggcg gatggcggca acatcgaggg gctggagggg
      721 tgattgagac atggcgttca tgcaaatccc tgtgtgggag ccaagccgat cacgaaaaga
      781 tccaccacgg agacaccaag gcgttggttc gggaaggctt cgcaaagcca ttcggcatgg
      841 gcggatggcc acgcgatcgc gcggatcccg cccgcgtcga atggcagggc cgcatgcggc
      901 cctgggcgcg ttgcgccctg cgaagcagga gtggaggagg agggcacgga gagctgcagg
      961 tctatcccgg gcagctccgt gatacctccg tggtctctgc gtctccgtgg tgagcccttc
     1021 atgacaggtc tcccagggag ccggcctggg tgcgggccat gacgaggtgg cgcagggccc
     1081 ggcgcaggct ggccacgggg acgtgggtga gcacgtccgc cgcgaagccg taggtcagga
     1141 ggttgcgggc gtcgtcggcg ttcaggccgc ggctctggag gtagaagagc tcctccgggt
     1201 ccagctggcc cacggcggcg ccgtggctgc acttcacgtc gtcggcgtag atctccagct
     1261 ggggcttggt gtccacccgg gcggaatccg agagcagcag gttgcggctc tgctgccggg
     1321 catccgtgcc ctgggcgtgc ggggccacga ggatctggcc gttgaagatg gcgcgggccc
     1381 tcccgtccac gatgcacttg tgcagctggt gactggaggc gctgggttcg gcgtggtgca
     1441 ggaaactgtg ggtgtcggcc acctgggcgc catcgagcag ggccaggccg tccagggtcg
     1501 cctcggcgcc ttcggccagc cgcacgcggg gttcctggcg ggagaaccgg gcgccgaagc
     1561 tgagggtgcg ggagtggtac tggccaccct tggccacctc ggcgtggagg gtgccgatgt
     1621 ggaaggcctc gggagattcg cgctgcacgc gctcgtggcg caggatggcg ccctccgcca
     1681 cgcggatctc gactacgggg cagctcaggt aggcgccctc tccgaggtgc tcctccacca
     1741 gctccagctc ggcaccgcgc tccagcacca ccagcagccg ggggaagacc gcggcggcct
     1801 cggccttcgt gatgaagagc aggtgcaggg gcagggccac cttgagattc ctgggcacca
     1861 ggatgacggc gccatcctcg aagcgcgcgg tgttcaggtc ctcgaagagg cccttcgccg
     1921 cgccgttccc cacgctgccc agggcgtggc aggcctcgct ggcgtgggac atggggaagt
     1981 agcgcacgcc agccgggacg gccgaggcgc agctggcgtg ggaggcgtga cgcccgttca
     2041 cgaagacctg acgcgtgccc accatctcgg gaagcaggtg gctgctgatg tccaccgtgg
     2101 cttccggggc gggcctgaag ctgatcgggg ccagggcctt caggtccgtg tatttccagt
     2161 cctcctcgcg ggtcgtgggc agctcgcgtc ccgccagccg cagctcggcc gcttcgcgca
     2221 gcagggtcca ctcggcgggc ctgggagcgc tgagcagatc agccagcagg ctggaaccag
     2281 ccgctactgt ggtcatcggg cgcctccggc ggcggcctct tccagcaccc agtcgtagcc
     2341 gcgctcttcg agctccacgg ccagctcctt gcccgcactc ttgaggatgc ggccgccgga
     2401 gagcacgtgc acgaactggg gctggatggt ctccaggatg cgggggaaat gcgtgatgat
     2461 cagcagggcg cggtcaggcc gctggagctt gttcacggcg tcacccagca ccctcagggc
     2521 gtcgatgtcc aggccgctgt ccagctcgtc caggatggcg agtttgggtt ccagcacggc
     2581 catctggagg atctcgttgc gcttcttctc gccgccggag aagccctcgt tgaggctgcg
     2641 gtccaggaac tcctcgcgca tggagaccag cttgatcttc tcgcggatga aatcgtcgaa
     2701 ctccagggga tccagctcgt cgcggccctc ggcctcggcc ttcttgttgt aggccaggcg
     2761 gaggaaggcg gcattgctga cgccgggcac ctcgatggga tgctggaagc ccatgaagat
     2821 gccggtcctg gcgcggacat cgggttccag ttcgaacagg ttccggccct cgtagagcac
     2881 ttcgccgccc gtgacctcgt aggcgggatg gcccaccagc accttgccca gggtggactt
     2941 gcccgagccg ttggggccca tgatggcgtg gatctccccc gccttgatct ccaggtcgat
     3001 ccccttcagc accggcgtgc cgttgatcga ggcggtgagg tttttaatcg aaagcatgaa
     3061 agaactccta gccacggata aacacggatg aacacagatg agcgaggatc agggtttgta
     3121 tccgtgttga tccgtgttca tctgtggcaa aactcatccc acgctccctt cgagtttgag
     3181 ggagagcagc ttggtggctt cgacggcgaa
//
LOCUS       DASUDT010000165         2398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_207288, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000165 DASUDT010000000
VERSION     DASUDT010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207288"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VFV26_03465"
     CDS             complement(<1..456)
                     /locus_tag="VFV26_03465"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4845250.1"
                     /translation="MRLISLELHGFKSFADAQKLSFPGGMTAVVGPNGCGKSNISDSL
                     AWVLGEQRASMLRGSEMADVIFSGTAQRRATGMAEVKLVLDMPDPALPGSSREVVISR
                     RLYRDTGSEYRINGREARLKDVQDMLLDTGMGTRAYSFIQQGQIDLILSS"
     gene            689..1420
                     /locus_tag="VFV26_03470"
     CDS             689..1420
                     /locus_tag="VFV26_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845251.1"
                     /translation="MRLPFLQAPATSLLWLEAHRVQTATHRRALSAPPTEDQLAQALT
                     SLPLGPTQWVLDDLWTPSVLLRDLTELPKGAEAQEAFFRWRFNQTLALAEPHFVQSLD
                     IEPGTWLACGIREDFRESLLQLGLRLDRTLHGLTPRWLHLYNLLAPTLNLPGMLLSLS
                     PAGEGRYAGSLVAWGRTLCLLRQWSEPLDPQGWNEERIAPSAAFLQRESRTPQSLAIW
                     GAPLWPETGLPVRILDDRFALVETP"
     gene            1420..2253
                     /locus_tag="VFV26_03475"
     CDS             1420..2253
                     /locus_tag="VFV26_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845252.1"
                     /translation="MAVPALHLNLAPRPSPWRQHHRLLGWAALGFGLAVLTGSLALTW
                     RAYHQASRAGRDAVSLTEETRRAARQESQIQASLQSMDATREQSRWKLAERILLERSL
                     PWSRVTAELEQCMVPGMRLKGLQRTRGNGQQVVMKLKAEAQNREAEAAFVEALRQAPV
                     FAQVILEREAERQGGGWDFELNLPAAAVPPPFEPKAVKAGSSVPAPAAAPRAAAAPSP
                     QPPAALKPAPQPLAPPPATPAAPLTPGGKEGVQARPAPADDEEGSRRRPNLRGSKRLP
                     Q"
BASE COUNT          346 a          923 c          778 g          351 t
ORIGIN      
        1 gctgctgagg atcaggtcga tctggccctg ctggatgaag ctgtaggccc gggtgcccat
       61 gcccgtgtcc agcagcatgt cctgcacgtc cttgagccgg gcctcccggc cgttgatgcg
      121 gtactcgctg ccggtatcgc ggtagaggcg gcgggagatg acgacttccc gggaggaacc
      181 gggcagggcc ggatccggca tgtcgaggac cagcttcact tccgccatgc ccgtggcccg
      241 gcgctgagcc gtgcccgaga agatcacgtc ggccatctcg gagccccgca gcatggaggc
      301 ccgctgctcg cccagcaccc aggccagact gtcggagata ttggacttcc cgcatccgtt
      361 gggccccacg accgcggtca tgccgccggg gaagctgagc ttctgggcgt cggcgaagga
      421 cttgaagcca tggagttcga gagagatcag gcgcacgaga tcagcgctcc ggggaaggtg
      481 gtggggaaca tctgcctcca tcattccaca ccaagcgtga cctccggccc cttgggaatc
      541 cggaagaggc ccggtagact cgattccttc ccctgtcctg ccaggagtcg tctgtgcatg
      601 cccccagctt ccccccgtgc gacccggcga tggatgcccg gctgggggtg tcgtgcccgg
      661 ggcagccggc tggaatccgg ggccgggcat gaggctgcct ttcctccagg ctcccgccac
      721 gtccctgctg tggctcgagg cccatcgggt ccagaccgcc acccatcggc gcgccctgtc
      781 ggcccccccc acggaggatc agctggccca ggccctgacc tccctgcccc tggggcccac
      841 ccagtgggtg ctggatgacc tctggacacc ctcggtgctg ctgagggacc tcacggaact
      901 gcccaagggc gccgaagccc aggaggcctt cttccgctgg cgcttcaacc agaccctggc
      961 cctggcggaa ccccacttcg tccagtccct ggacatcgag ccgggcacct ggctggcctg
     1021 cggcatccgg gaggatttcc gggaatccct gctccagctg gggctccgcc tggatcgcac
     1081 cctgcacggc ctgacgcccc gctggctgca cctctacaac ctcctggccc ccacgttgaa
     1141 cctgcccggc atgctcctct ccctgagccc cgcgggggaa ggccgctatg ccggctccct
     1201 ggtggcctgg gggcggaccc tctgcctgct ccgccagtgg tccgaacccc tggatcccca
     1261 gggctggaac gaagagcgca tcgcgcccag cgccgccttc ctccagcggg aatcccggac
     1321 cccgcagagc ctggccatct ggggcgctcc cctctggccg gaaaccggcc ttccggtccg
     1381 gatcctggat gaccgcttcg ccctggtgga gacgccctga tggccgttcc tgccctccac
     1441 ctcaacctgg ccccccgccc cagtccctgg cggcagcacc accggcttct cggatgggcc
     1501 gccctgggct tcggcctggc cgtcctcacc ggctccctgg cgctcacctg gcgcgcctac
     1561 caccaggcca gccgggccgg gcgcgatgcc gtgagcctca ccgaggagac ccggcgcgcc
     1621 gcccggcagg aatcgcagat ccaggcctcg ctccagagca tggacgccac ccgggagcag
     1681 tcccggtgga agctggccga gcgcatcctc ctggagcgga gcctgccctg gtcgcgggtc
     1741 accgccgaac tggaacagtg catggtcccc ggcatgcgcc tgaaggggct tcagcggacc
     1801 cgcggcaacg gccagcaggt ggtgatgaag ctgaaggccg aagcccagaa ccgcgaggcg
     1861 gaagccgcct tcgtggaggc cctccgccag gccccggtct tcgcccaggt gatcctagag
     1921 cgggaagccg agcggcaggg cggtggctgg gacttcgaat tgaacctgcc cgcggcggcc
     1981 gtgccgccac ccttcgaacc gaaagccgtg aaggccggat cctccgtgcc tgcccccgcc
     2041 gccgccccca gggccgcggc ggctccatcc ccgcaaccac ccgcagcact gaagccagcg
     2101 ccgcagcccc tcgccccccc gcccgccact ccggcggccc ccctcacccc gggtggcaag
     2161 gagggggtcc aggcccgtcc ggctccagct gacgatgaag agggctcccg ccgccgcccg
     2221 aacctgcgcg gttccaagag gctcccccaa tgagcagccc ccttcgcgcg agccgtctcc
     2281 gcctggccct gggcgccctg ggactggtgc tgggcctggg cgtggcgctc ttcatgctcc
     2341 cggacgcctc ccagcagctg gcccagaaac tgaatgccaa acgcgaagcc gagctgca
//
LOCUS       DASUDT010000166         3126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2062977, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000166 DASUDT010000000
VERSION     DASUDT010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2062977"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VFV26_03480"
     CDS             complement(<1..1004)
                     /locus_tag="VFV26_03480"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEX4845253.1"
                     /translation="MRVLLLALAGTGLLAGWPQTTPERTQLRRTSTVAEVRAFMEALR
                     RQAPGLEPYHPKGAPRATETGKPLLAWRLKGTGPDPLRVYVNANIHAGEVEGKEAIQQ
                     ILRELLQGRHPALRRNLDLVVMPAYNADGTDALDPAIRPWQPNPTESGVGRRENALGL
                     DLNRDFMRAAAPNTRWLLAMLGDFDPAVVLDLHTTNGSTHGFHLTHGPACTLGADEHL
                     LAYNRQMLVAVREQLKAEGMPTYDYGNFVPYRPTAEKPPTAWETYDAHPRLLTNYPAL
                     RNRMAVLSESYVYRSWPDRISDTRRFVLACLEWMAAHRAEVRIQLQGAQARWTEAWKK
                     G"
     gene            complement(1008..1478)
                     /locus_tag="VFV26_03485"
     CDS             complement(1008..1478)
                     /locus_tag="VFV26_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845254.1"
                     /translation="MNLKLEAVNLLRWLHFVALAVGGGAAVVALLLSGFEEGREDIRG
                     LAATIWSKVVAWSFRLALIVGIALLVTMMQGGQNPLKAGSYFHIKLLLVLVLVGLSEM
                     TPKALAVGKRGSALLALVLFLASSFTVYNKGLFGARPKAGPEMPVTAETTFQAR"
     gene            1549..2514
                     /locus_tag="VFV26_03490"
     CDS             1549..2514
                     /locus_tag="VFV26_03490"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4845255.1"
                     /translation="MSKLRVAVVGVGHLGQHHARIAASAPDAILTAVVDPDPVRGPEI
                     AAKFGAPWAASLAQALSSVDAVQIAAPTGFHHALGIQALAGGKHVLMEKPLAASLEEG
                     VALLKALADARAANPGIVAQVGHLERFNPAVTALRERGFKPRFLEAVRVSPFPARSLE
                     VDVVMDVMIHDLDLLRALVGRPVIDVEAVGVPVLTPYADLVNARLKFEGGAFATVTAS
                     RVARKKERTLRAFGDKEYASLDFAAQKLELLRLVMGPEGPEVQPETASIEEGEPLRLE
                     IEAFHAACLGRGTEGVTWEEGQEAMRVADQVQKAVAKSLAEISRA"
     gene            2511..>3126
                     /locus_tag="VFV26_03495"
     CDS             2511..>3126
                     /locus_tag="VFV26_03495"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX4845256.1"
                     /translation="MNAFYDLASLAKPLVTAPLALAFLDLDADRRWALGFQDRETPLT
                     VRQLLSHSSGLPPWRPFTGEPVAAQLRRPVPDHPLLRPATPGLATYSDLNYRLLADLL
                     EADTGLPFAILGAASGLSPAPWREAPVEVPDGPDATAWPLATDLPLPPRHPGLPQDAN
                     ARAGMKGHAGFGASAPQLEAALARWVAAGWPGRMAAGTAEGEHGA"
BASE COUNT          435 a         1129 c         1111 g          451 t
ORIGIN      
        1 cccttcttcc aggcctcggt ccagcgggcc tgggcgccct ggagctgaat gcggacctcc
       61 gcccggtgcg cggccatcca ctccaggcag gccagcacga agcggcgggt atcggagatg
      121 cggtcgggcc agctgcggta gacgtagctc tccgacagca ctgccatgcg gttgcgcagg
      181 gccgggtagt tcgtgagcag ccgggggtgg gcgtcgtagg tctcccaggc cgtgggcggc
      241 ttctccgccg tgggccggta gggcacgaag ttgccgtagt cgtaggtggg catgccctcg
      301 gccttcagct gctcgcgcac cgccaccagc atctggcggt tgtaggccag caggtgctcg
      361 tccgccccca gggtgcaggc cggcccgtgg gtgaggtgga agccgtgggt gctgccgttg
      421 gtggtgtgca ggtccagcac caccgccggg tcgaagtcgc ccagcatggc cagcagccac
      481 cgggtgttgg gcgcggcggc ccgcatgaag tcgcggttca ggtccaggcc cagggcgttc
      541 tcgcgccgcc cgacgccgct ttccgtgggg ttgggctgcc agggccggat ggcgggatcc
      601 agggcatccg tgccatcggc gttgtaggcg ggcatgacca ccaggtccag gttccgccgc
      661 agggccggat gcctcccctg gagcagttcc cggaggatct gctggatggc ctccttgcct
      721 tccacttccc cggcgtggat gttggcgttc acgtagaccc gcaggggatc cggccccgtc
      781 cccttcaggc gccaggccag caggggcttg cccgtctctg tggcgcgggg ggcgcccttg
      841 ggatggtagg gctccaggcc cggcgcctgc ctgcgcaggg cctccatgaa ggcccgcact
      901 tcggccacgg tggaggtgcg ccggagctgg gtgcgctcag gcgtggtctg gggccacccg
      961 gcgaggagtc ccgtccccgc cagggccagc agcaggaccc gcatggatca gcgggcctgg
     1021 aaggtggttt ccgccgtcac cggcatttcc ggaccggcct tggggcgggc gccgaacagc
     1081 cccttgttgt agacggtgaa gctggaggcc aggaacagca ccagcgccag cagggccgag
     1141 ccccgcttgc ccacggccag ggccttgggg gtcatctcgg agaggcccac caggacgagc
     1201 accagcagca gcttgatgtg gaagtaggag ccggccttca gcggattctg gcccccctgc
     1261 atcatcgtca ccaggagggc gatgcccacg atgagcgcca gccggaagga ccaggccacc
     1321 accttggacc agatggtggc ggcgaggccg cggatgtcct cgcggccctc ctcgaagccc
     1381 gacagcagca gggccaccac ggcggcgccg ccgcccacgg caagggccac gaaatgcagc
     1441 cagcggagaa ggttcacggc ttcgagcttg aggttcatgg ttcgcccctg gagaaggaat
     1501 ccagggtagc agccctgcta ggctcattgg attgatcggg aggatgtcat gtccaagctg
     1561 cgcgtcgccg tcgtgggtgt aggacacctg gggcaacacc acgcacgaat cgcggcctcc
     1621 gcgccggacg ccatcctgac cgccgtggtg gaccccgatc ccgtccgcgg ccccgagatc
     1681 gccgccaagt tcggcgcgcc ctgggccgcc tcgctggctc aggccctctc cagcgtggac
     1741 gccgtgcaga tcgccgcccc cacgggcttc caccatgccc tcggcatcca ggccctggcg
     1801 ggcggcaagc acgtgttgat ggaaaagccc ctggccgcct ctcttgagga gggcgtggcc
     1861 ctgctcaagg ccctggccga cgcccgggcc gccaaccctg gcatcgtcgc ccaggtgggc
     1921 cacctggagc gcttcaatcc cgccgtgacg gccctgcggg agcgcggctt caaaccccgc
     1981 ttcctcgagg ccgtgcgcgt ctcccccttc cctgcccgca gcctcgaagt cgatgtcgtc
     2041 atggacgtga tgatccacga cctggacctg ctgcgcgccc tggtggggcg cccggtgatc
     2101 gacgtggagg ccgtgggtgt gcccgtgctg acgccctacg ccgacctggt gaacgcccgc
     2161 ctgaaattcg agggcggcgc cttcgccacc gtcaccgcca gccgcgtggc ccggaagaag
     2221 gagcgcacgc tgcgagcctt cggcgacaag gaatacgcca gcctcgattt cgccgcgcag
     2281 aagctggagc tgctgcgcct ggtcatgggt cccgagggcc ccgaagtcca gcccgagacc
     2341 gccagcatcg aggaaggcga gcccctgcgc ctggagatcg aggccttcca cgccgcctgc
     2401 ctgggccggg gcaccgaggg cgtcacctgg gaggagggcc aggaggccat gcgcgtggcc
     2461 gaccaggtac agaaggccgt ggcgaagagc ctcgcggaaa tcagcagggc gtgaacgcct
     2521 tctacgacct cgcctccctc gccaagcccc tggtgacggc gcccctggcg ctggccttcc
     2581 tggacctcga cgcggaccgg cgctgggccc tgggtttcca ggaccgggag acgcccctga
     2641 cggtgcgaca gctgctgtcg cacagctcgg gcctgccccc ctggcgcccc ttcacgggcg
     2701 agccggtggc ggcccagctg cgccgccccg tcccggatca ccccctgctg cgcccggcca
     2761 cgccgggatt ggccacctat tcggatctga actaccgcct gctggcagac ctgctggagg
     2821 ccgacaccgg cctgcccttc gcaatactgg gcgcggcctc gggcctcagc ccggctccct
     2881 ggagggaggc gcctgtcgaa gtgccggacg gccccgatgc caccgcctgg cccctggcca
     2941 cggatctgcc cctgcctccg aggcacccgg gcctgcccca ggacgccaac gcccgggccg
     3001 gcatgaaggg ccacgcgggc ttcggcgcct ccgcccccca gctggaagcc gccctggccc
     3061 gctgggtggc tgcgggctgg cccggacgca tggccgccgg gaccgccgag ggggagcacg
     3121 gcgccc
//
LOCUS       DASUDT010000167         2526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_185473, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000167 DASUDT010000000
VERSION     DASUDT010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185473"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VFV26_03500"
     CDS             complement(<1..370)
                     /locus_tag="VFV26_03500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX4845257.1"
                     /translation="MLFTTATGYALRALAALPEDGSYCLAKDLASQLDLPGPYLAKIL
                     QGLVQADILESVRGPKGGFRLTRPSHRITVGDVVIALEGPNSLDGCIMGFPACGGDHP
                     CPLHEAWGAVKAQVATSMTEA"
     gene            complement(450..1214)
                     /locus_tag="VFV26_03505"
     CDS             complement(450..1214)
                     /locus_tag="VFV26_03505"
                     /inference="COORDINATES: protein motif:HMM:NF025615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HEX4845258.1"
                     /translation="MSRLLPPWRTLLPAEHGSWFMLGFPMVLGLLVRPGLPGLLLALA
                     ALAVFLARPPLRRVLGGQRDPLQRRALALFGSLAALLGLGALALAGPRFLMPAALTAP
                     LAAFALRADAARAVRSLTVELVAQGAFAGLAAVILVAGGASFAQAGLAWLFATLLGGA
                     NLAHVRRLLGHAHGLPAAELRRRWLPVHLLHLALLAASALLLARSAAGLAWTGWAALL
                     YLRAALPYRPTPARILGWREGGLSAVGLLLLWRALA"
     gene            complement(1278..>2526)
                     /locus_tag="VFV26_03510"
     CDS             complement(1278..>2526)
                     /locus_tag="VFV26_03510"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845259.1"
                     /translation="ASVADLAAAPTDQLIVSLPAPLTLELVEQLCRQGGGATVVYVVA
                     GGLGDGADAEGLGQRLVACLEAHRRAGKWTPALVGPNGLGLYSPDLDLNTLFIPDEKL
                     PLRPKSGHAALVSQSGAFLITRLSRRPELGLRAAVAIGNQMDLRCSDFLAGFGSDPAV
                     KVVGAYLEGFAPGDLKATAEAAQRLRAAGRRVLLYKGGRSQEGMAAASSHTGALAGDH
                     ALQASVLRRAGVMLAERIEAFDAALAWLGAYAEGSPRRVAIMTNAGFESVASADLLGG
                     PFRGSKLTEAETAALAATIEAHGLTGLVSPRLPLDLTPMADEAAYLASADLLLASEAD
                     AVVVGLVPLTRRLGTADPAAFGPFARSLAAQARVRGKWLGVAVEGGALYDAYRQGLRE
                     AGLPVFMTMEEALEGLRLIASEL"
BASE COUNT          367 a          859 c         1024 g          276 t
ORIGIN      
        1 tggcctcggt catggaggtg gccacctggg ccttcacggc cccccaggcc tcgtgcaggg
       61 ggcagggatg gtcgccgcca caggcgggga agcccatgat gcagccgtcc agggagttcg
      121 ggccttcgag ggcgatgacc acgtccccca cggtgatgcg gtgggagggc cgggtcaggc
      181 ggaagccccc cttgggaccc cgcacggatt ccaggatgtc cgcctgcacc aggccctgga
      241 ggatcttggc caggtaggga cccggcaggt ccagctggga ggccaggtcc ttggcgaggc
      301 agtagctgcc atcctcgggc agggccgcga gggcgcgcag ggcatagccg gtggccgtgg
      361 tgaacaacat tcaggattcc ttattctgat tataggatcc tcgggggaga ttccggagtc
      421 cagccccatc gtccggtttg tgaccgggat caggccaggg cccgccagag cagcaggagg
      481 cccacggcgc tgaggccccc ctcccgccag cccaggatgc gcgcgggcgt ggggcggtag
      541 gggagggccg cccgcaggta gagcagggcg gcccagccgg tccaggccag gcccgcggcg
      601 ctccgggcca gcagcagggc cgaggcggcc aggagggcca ggtgcaggag gtggacgggg
      661 agccagcgcc gccgcagctc cgcagcgggg aggccatggg cgtggcccag gaggcgccgc
      721 acgtgggcca ggttggcgcc gcccaggagg gtggcgaaga gccaggccag gccggcctgg
      781 gcgaaggagg cgccgccggc cacgaggatc accgcggcca ggcccgcgaa ggccccctgg
      841 gccaccagct cgacggtgag ggagcgcacg gcccgggccg cgtccgcccg gagggcgaag
      901 gccgccaggg gcgccgtgag ggccgcgggc atgaggaagc gcggacccgc cagggccagg
      961 gccccgagac ccaggagcgc ggccaggctc ccgaagaggg ccagggcccg gcgctggagg
     1021 ggatccctct ggccgcccag cacccgccgg aggggggggc gggccaggaa gaccgccagg
     1081 gccgccaggg ccagcagcag tcccggaagg cccggccgca ccagcaggcc cagcaccatg
     1141 gggaaaccga gcatgaacca gctgccgtgc tcggcgggca ggagggtgcg ccagggggga
     1201 aggagtcggg acatttcggg cctttctagt ccgaaataga gtctgacctc aaatggcgct
     1261 tcgggccatg gatgggatca cagttcggac gcgatgagcc gcaggccctc cagggcctcc
     1321 tccatggtca tgaacacggg caggcccgcc tcgcggaggc cctggcggta ggcgtcgtag
     1381 agggcgccgc cctccaccgc cacgcccagc cacttgcccc ggacgcgggc ctgggcggcc
     1441 aggctccggg cgaaggggcc gaaggcggcg gggtcggcgg tgcccaggcg gcgggtgagg
     1501 ggcaccaggc ccaccaccac cgcatcggct tcggaggcca gcagcaggtc ggcgctggcc
     1561 aggtaggcgg cctcgtcggc catgggagtg aggtccaggg gcaggcgggg gctcaccagg
     1621 cccgtgaggc catgggcttc gatggtggcg gccagggcgg ccgtttcggc ctccgtgagc
     1681 ttggagcccc ggaagggtcc ccccagcagg tcggcggagg ccacggactc gaagcccgcg
     1741 ttggtcatga tggccacgcg ccgggggctg ccctcggcgt aggcgcccag ccaggcgagg
     1801 gcggcgtcga aggcctcgat gcgctcggcc agcatcacgc ccgcccgccg cagcacgctg
     1861 gcctgcagcg catggtcgcc cgcgagggcg cccgtgtggc tgctggcggc ggccatgccc
     1921 tcctggctgc gcccgccctt gtagaggagc acgcggcggc ccgccgcgcg gagccgttgg
     1981 gcggcctcgg cggtggcttt gaggtcgccg ggggcgaagc cctccaggta ggcgcccacc
     2041 accttcacgg cgggatccga gccgaaaccg gcgaggaagt ccgagcagcg cagatccatc
     2101 tggttgccga tggccacggc ggcccgcagg cccagctcgg gccggcggct caggcgggtg
     2161 atgaggaagg cgccgctctg gctcaccagg gccgcgtggc cggacttggg ccgcaggggc
     2221 agcttctcgt cggggatgaa gagggtgttc aggtcgaggt cggggctgta gaggcccagg
     2281 ccgttggggc ccaccagggc cggggtccac tttccggcgc ggcggtgggc ttcgaggcag
     2341 gccacgagcc gctggccgag gccctcggca tcggcgccgt cgcccaggcc cccggccacc
     2401 acgtagacca ccgtggcgcc gccgccctgg cggcacagct gttccaccag ctccagggtc
     2461 agcggcgcgg gcagggagac gatgagctgg tccgtgggcg ccgccgcgag gtcggccacg
     2521 gaggcg
//
LOCUS       DASUDT010000168         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_185511, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000168 DASUDT010000000
VERSION     DASUDT010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185511"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VFV26_03515"
     CDS             complement(<1..420)
                     /locus_tag="VFV26_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845260.1"
                     /translation="MRLGPLQQHFRERLRKRTPWAAVLAFAALFTALQFMLVPASVQV
                     RHPGALANVLLMPLMVSFCYGFLSPLPWRWTGDDRLRAPLARGLVQALAFNALVIAVL
                     VGLSWFMVRNASLKAEAMGLAPGAKGTFGGILLVNLMV"
     gene            542..1078
                     /locus_tag="VFV26_03520"
     CDS             542..1078
                     /locus_tag="VFV26_03520"
                     /inference="COORDINATES: protein motif:HMM:NF012479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEX4845261.1"
                     /translation="MRPLAFLALAATLALPAAERKVPMSLHELTLNTLGGKPQPLAAF
                     KGKVVLAVNVASACGYTPQYAGLQKLHTEYGNRGLVVLGFPCNQFGGQEPGTAAQIEA
                     FCQVNYGVTFPLFEKLDVKGADQAPLYRFLTAKHGEPAWNFHKYLVGKDGQVIQAFPS
                     KVAPDSAELRAAIESALK"
     gene            complement(1196..1882)
                     /locus_tag="VFV26_03525"
     CDS             complement(1196..1882)
                     /locus_tag="VFV26_03525"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX4845262.1"
                     /translation="MPDLGPLPTWSFALGVATSLFSVLNPISAAAIFASATTGMEEAA
                     LRRSAKKAALTAGAAMLAFALVGQFIFSLFGFTALAMRFVGGVLVLYRAISMLYGEDP
                     RERSTEDEKAEASRKLPEDFAIIPFGIPLVAGPGTLSTVMGMIAGVTWLEYGVVLVAI
                     LLNAWVVYLFLRKAPVVFARLGAIGTKVVNKLMGLILAAVAMQFLINGVKALYLEMRE
                     APSAAIVATK"
     gene            2120..>2577
                     /locus_tag="VFV26_03530"
     CDS             2120..>2577
                     /locus_tag="VFV26_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4845263.1"
                     /translation="MRDLDALRDQHQRRLAWMPWLYFSLKARHRAWAEAWQAEVQARL
                     AAQETVTLGSGCFIAPDAAIFGEPGRGVVIGDRCAIAAQAFLHGPLTLGNDVSVNAGA
                     RLDGGRKGLVIGDGTRIASGAAIYAFDHGMKPDRDIKDQPVRSRGIRIGR"
BASE COUNT          440 a          918 c          873 g          346 t
ORIGIN      
        1 caccatgagg ttgaccagga ggatgccgcc gaaggtgccc ttggccccgg gggccaggcc
       61 catggcttcg gccttcaggc tggcgttccg caccatgaac cagctcagcc ccacgagcac
      121 cgcgatgacc agcgcgttga acgccagggc ctggaccagc ccgcgggcca ggggggcccg
      181 gaggcggtcg tcgccggtcc agcgccaggg cagggggctg aggaagccgt agcagaagga
      241 caccatcagg ggcatgagga ggacgttggc cagggccccc gggtggcgca cctggaccga
      301 ggcgggcacc agcatgaact ggagggccgt gaacagcgct gcgaaggcca ggactgccgc
      361 ccagggcgtc cgctttcgca gacgctcccg gaagtgctgc tggagggggc cgaggcgcat
      421 ggtgcaagca tgcccgagcc cggggggacc gcccagcccc tccggccgcc ggggcttccc
      481 tgccgttgga agggaacggg cgctcgcccg gcggcaccca aggaaggatc ccggagcccc
      541 catgcgcccc ctcgcattcc tcgccctcgc cgccaccctg gccctgcccg ccgctgaaag
      601 gaaggtgccc atgtccctgc acgagctcac cctcaacacc ctgggcggga agccccagcc
      661 cctggccgcc ttcaaaggca aggtggtgct cgccgtgaac gtggccagcg cctgcggcta
      721 cacgccccag tacgcgggcc tgcagaagct ccacaccgag tacgggaacc gcggcctggt
      781 ggtcctgggc ttcccctgca accagttcgg cggccaggaa cccggcactg cggcccagat
      841 cgaagccttc tgccaggtga actacggcgt caccttcccc ctctttgaaa agctggacgt
      901 gaagggcgcg gaccaggccc ccctgtaccg cttcctcacc gccaagcacg gggagcccgc
      961 ctggaacttc cacaagtacc tcgtcggcaa ggacggccag gtgatccagg ccttccccag
     1021 caaggtggcg cccgacagcg ccgagctgag ggccgccatc gaatctgcct tgaagtagaa
     1081 aagacgaccg aggaacacag aggacacgga aacccacgga ggacacagaa gattttttct
     1141 cggtgtcttc tgtgaacctc tgcgacctct gtgttccagc tccctgacgc tggggttact
     1201 ttgtcgccac gatggccgct gacggcgcct cccgcatctc gaggtagagg gccttcacgc
     1261 cgttgatgag gaactgcatg gccacggcgg ccaggatcag gcccatgagc ttgttcacca
     1321 ccttggtgcc gatggccccc aggcgggcga acaccaccgg ggccttgcgc aggaacaggt
     1381 agaccaccca ggcgttcagc aggatggcca cgagcaccac gccgtactcc agccaggtca
     1441 cgcccgcgat catgcccatg acggtggaca gcgtgccggg ccccgccacc agcgggatgc
     1501 cgaaggggat gatggcgaag tcctccggca gcttgcggct ggcctcggcc ttctcgtcct
     1561 cggtgctgcg ctcgcgggga tcctcgccgt acagcatcga gatggcgcgg tagaggacca
     1621 gcaccccgcc cacgaagcgc atggccaggg ccgtgaagcc gaagaggctg aagatgaact
     1681 ggcccaccag ggcaaaggcc aacatggccg cgcccgccgt gagggcggcc ttcttggcgc
     1741 tgcggcgcag ggccgcctct tccatccccg tggtggcgct ggcgaagatg gccgccgcgc
     1801 tgatggggtt cagcaccgag aacagcgagg tcgccacgcc gagggcgaaa gaccaggtgg
     1861 gcagggggcc gaggtcgggc atggggccat ggtagcgggg gaactaaagt ccggagtctg
     1921 gagtctggag tctggcgtct ggaggtactg ctttctgggc ggccctccag ggccgcaccc
     1981 atgttcttcc tttgggctcg accatccgga gcgcctcgcc caaaggcgaa cagccggcgc
     2041 ggccgaaggc cgcatcagat ccgtacctcc ggactccaga ctccagactc acaaccacgc
     2101 tccccgctac catggcccca tgcgcgacct cgatgccctg cgggaccagc accagcgccg
     2161 cctggcctgg atgccctggc tctacttctc gctcaaggcg cgccaccggg cctgggccga
     2221 ggcctggcag gccgaggtgc aggcccggct cgcggcccag gagacggtca ccctgggctc
     2281 aggctgcttc atcgcgcccg acgccgccat cttcggcgag ccgggccgcg gcgtggtcat
     2341 cggcgaccgc tgcgccatcg ccgcccaggc cttcctgcac gggcccctca ccctcgggaa
     2401 cgacgtcagc gtgaacgccg gggcgcggct ggacggcggg cggaagggcc tcgtcatcgg
     2461 cgacggcacg cgcatcgcca gcggcgcggc gatctacgcc ttcgaccacg ggatgaagcc
     2521 ggaccgcgac atcaaggacc agcccgtgcg ctcccggggc atccgcatcg gccgcga
//
LOCUS       DASUDT010000169         2785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_8777, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000169 DASUDT010000000
VERSION     DASUDT010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8777"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VFV26_03535"
     CDS             complement(<1..417)
                     /locus_tag="VFV26_03535"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HEX4845264.1"
                     /translation="MRQFDQELKDLRDGILVMAGVAEEMIDLTIQALDERSSAKADQV
                     QGLDRRLDEWELKLDRLCIDLLALRSPAAGDLRLIASSLKIVPELERIGDHCCNIARR
                     VPSVHPPILGGNDLEQLGTQTRNMVRRAVDAFVGRDA"
     gene            complement(417..1304)
                     /gene="pstB"
                     /locus_tag="VFV26_03540"
     CDS             complement(417..1304)
                     /gene="pstB"
                     /locus_tag="VFV26_03540"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX4845265.1"
                     /translation="MDIDAPRPVPEPARLPHAFQAPQGRPAAGPAAPDLPLTDPSVLS
                     APTMLRIERLNLFYGEKQALSDINLEVAKHSVMSFIGPSGCGKSTLLRCLNRMNDLID
                     GVRIEGRVLLGDTDLYAPATDVIALRKRAGMVFQKSNPFPKSIFENVAYGLRIQGQKD
                     RTTLEEAVERSLKGAGLWDEVKDRLKDSAQGLSGGQQQRLCIARALAVRPEVILMDEP
                     CSALDPIATARIEELILELKREFTIVIVTHNMQQAARVSDHTAFFWMGKLIEAGLTEK
                     LFTTPGHRMTEDYITGRFG"
     gene            complement(1328..>2785)
                     /gene="pstA"
                     /locus_tag="VFV26_03545"
     CDS             complement(1328..>2785)
                     /gene="pstA"
                     /locus_tag="VFV26_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX4845266.1"
                     /translation="PLVQIQTPEGPVLGELTGHEAALGGEPARIQVRVGNRDVYGQDF
                     RWIPSDGLGAPERPLDAVLVERLEYGAFMGRVAFLDHQGQRAATGAEALRQATLHLPE
                     AARLRRHIQSIEKDQIGELNHRMEKLRLARRRADQGGDAAAAAALDARTADLQARYDT
                     LQASLEKAREDARAWTVGLETVEGQIKEVPLGGIVRLLSPNALDGSGKLAVYLSRLWE
                     FLADDPRESNTEGGIFPAIFGTVMMVMVMSVLVVPLGVVTALYLREYARQGWLVRAVR
                     VAVNNLAGVPSIVFGVFGLGFFVYSLGGTIDQLFFSDTLPTPTYGTGGILWASLTLAL
                     LTVPVVVVATEEALGAVPRSQREASLAMGATKWQTLWNVVLPSATPGILTGLILAIAR
                     CAGEVAPLMLTGVVKLAPSMPLDGTFPFFHLDRKFMHLGFHIYDVGFQSPNSEAAKPM
                     VFMASFLLLLVVVILNLFALNLRRKLRERLGGSTF"
BASE COUNT          430 a          903 c         1035 g          417 t
ORIGIN      
        1 ggcatcgcgc cccacgaagg cgtccacggc gcggcggacc atgttccggg tctgggtgcc
       61 cagctgctcc aggtcgttcc cacccaggat gggcgggtgg accgaaggca cccggcgggc
      121 gatgttgcag cagtggtcgc cgatgcgctc cagctcgggg acgatcttca ggctggaggc
      181 gatcaggcgg aggtcccccg cggcggggga acggagggcc aggaggtcga tgcagaggcg
      241 gtcgagcttc agctcccact cgtccagccg ccggtcgagt ccctgcacct ggtcggcctt
      301 ggccgaggaa cgctcatcca gggcctggat ggtgaggtcg atcatctcct ccgccacgcc
      361 cgccatgacg agaatgccgt cgcgcaggtc cttgagttcc tggtcgaatt ggcgcatcag
      421 ccgaacctcc ccgtgatgta atcctcggtc atgcgatggc cgggcgtcgt gaacagtttc
      481 tcggtgagcc ccgcctcgat gagcttaccc atccagaaga acgccgtgtg gtcgctcacc
      541 cgggcagcct gctgcatgtt gtgggtgacg atcacgatgg tgaactcgcg cttcagctcc
      601 aggatcagct cttcgatccg ggcggtggcg atgggatcca gggccgagca gggctcgtcc
      661 atgaggatga cctcgggacg caccgccagg gcccgggcga tgcagagccg ctgctgctgg
      721 ccgccggaca gcccctgggc cgaatccttg agccggtcct tcacctcgtc ccagaggccg
      781 gcgcccttga ggctgcgctc cacggcctcc tcgagcgtcg tgcggtcctt ctgcccctgg
      841 atccggagac cgtaggccac gttctcgaag atggacttgg gaaaggggtt cgacttctgg
      901 aagaccatgc cggcccgctt gcgcagggcg atgacatccg tggccggggc gtagaggtcc
      961 gtgtcgccca gcaggacgcg gccttcgatc cggacgccgt cgatgaggtc gttcatgcgg
     1021 ttcaggcagc ggagcagggt gctcttgccg cagccggagg gcccgatgaa ggacatcacg
     1081 gaatgcttcg ccacctcgag gttgatgtcc gacagggcct gcttctcccc gtagaagagg
     1141 ttcaggcgct cgatgcgaag catggtgggc gccgacagga ccgagggatc cgtcagggga
     1201 aggtccggcg cggcgggccc cgcggccggg cggccttgtg gcgcctggaa ggcgtggggc
     1261 agccgggcgg gctccggcac ggggcggggg gcgtcgatgt ccatgtcgat ggctccggtt
     1321 ctcatcatca gaaagtgctc cccccgaggc gttcccgcag cttgcgccgg aggttcagcg
     1381 cgaacaggtt caggatgacc accaccagca gcagcaggaa ggaggccatg aacaccatgg
     1441 gcttggccgc ctccgaattg gggctctgga agcccacgtc gtagatgtgg aagcccaggt
     1501 gcatgaactt gcggtccaag tggaagaagg ggaaggtgcc gtccaggggc atggagggcg
     1561 cgagcttcac cacgcctgtg agcatgagcg gcgcgacctc gccggcgcag cgggcgatgg
     1621 ccaggatcag cccggtgagg atgccgggcg tggcgctggg caggaccacg ttccagaggg
     1681 tctgccactt ggtggcgccc atggccaggc tggcctcgcg ctgggagcgg ggcacggcgc
     1741 cgagggcctc ctccgtggcc accaccacca cgggcacggt gaggagggcc agggtgaggg
     1801 aggcccagag gatgccgccg gtgccgtagg tgggggtggg aagggtgtcg gagaagaaga
     1861 gctgatcgat ggtgccgccc aggctgtaga cgaagaagcc cagcccgaac acgccgaaca
     1921 cgatggaggg gacgcccgcg agattgttga cggccacgcg caccgcccgc accagccagc
     1981 cctgccgggc gtactcgcgg aggtagagcg ccgtgaccac ccccaggggg accaccagca
     2041 cggacatcac catgaccatc atcacggtgc cgaagatggc ggggaagatg cccccctcgg
     2101 tgttcgactc ccggggatcg tccgccagga attcccagag gcgggacagg tagacggcga
     2161 gcttgccgga cccgtccagg gcgttggggc tgagcaggcg cacgatgccg cccaggggga
     2221 cctccttgat ctgcccctcc acggtctcga gcccgacggt ccaggcccgg gcgtcctcgc
     2281 gggccttctc gaggctggcc tgcagggtgt cgtagcgggc ctgcaggtcg gccgtcctgg
     2341 catccagcgc cgccgcagcc gccgcgtccc cgccctgatc ggccctgcgg cgggccaggc
     2401 ggagcttctc catgcggtgg ttgagctcgc cgatctggtc cttctcgatg gactggatgt
     2461 gccggcggag ccgggcggcc tccggcagat gcagggtggc ctgccggagg gcctcggcgc
     2521 cggtggcggc gcgctggccc tggtggtcca ggaaggccac gcggcccatg aaggcgccgt
     2581 actcgaggcg ttccaccagg acggcatcca gggggcgctc gggggcgccc aggccgtccg
     2641 agggaatcca gcggaagtcc tggccgtaga catcgcggtt gcccacccgg acctggatcc
     2701 gggcgggctc gccgcccagg gcggcctcgt ggccggtgag ttcgcccagc accgggccct
     2761 cgggcgtctg gatctgcacc agggg
//
LOCUS       DASUDT010000170         4277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1422550, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000170 DASUDT010000000
VERSION     DASUDT010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422550"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VFV26_03550"
     CDS             <1..778
                     /locus_tag="VFV26_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845267.1"
                     /translation="FSGGTWQRHAHTSPQGLSLGSGRFGSDGSFRAFAYDSAFQAGLF
                     QMLPDGTAATQFVPGMPRGERWGPFETPSGNLVTLHQDSVGWYQGVRTPGGNWSFHLL
                     SGADPAVLRPFSCRGVQVDAQGVLHAIFAAEGPELRVDYLKVAADGTAQLQNVCTGVS
                     AYAWGRVGDLAVTPDGGRVGFAIMDGSGVLRTGTKSGTGDWSLKTATVPDAAINYVVP
                     FIKCGFLGNGRFWVLHDVVIHPALAESERCFELLEAPATP"
     gene            850..2280
                     /locus_tag="VFV26_03555"
     CDS             850..2280
                     /locus_tag="VFV26_03555"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX4845268.1"
                     /translation="MTQLPRLHWSTLGDDTGGLEHRWAALWDITVDRGASPALAPRDV
                     DLWVISAKGAWPPPELNRMMAEVAALPILLGLRPESAPMDPKALSEWGSLGSVRWGVL
                     GPEPPMPGLRPRSGTTTQLSASQALAFGLVGTSPAMQDVLARARSAAATRATVLLLGE
                     SGTGKEVIARAIHRMSADASQPFVAVHCGAIPENLLESELFGYNKGAFTDARKDTPGK
                     FREAHGGTIFLDEVGTMPLGAQVRLLRVLQEREVQPLGGGAPVKVDVRVVTASNVDLW
                     KKVQDGSFREDLFYRLEVVPITLPPLRARPEEIPFLAQHFLNRKAREHGLYPKALHPS
                     VDPLLMALPWPGNVRQLENAIERAIVLSGTRPVLTREDFAFLAERMSEAPAAEGGTKV
                     DFTPLPVSAFSPAPSAAFGMDLPAEGLDLNQVVSDMEKTLMLQSLAITRGNKKRAADL
                     LGLKRTTFLEKMKRLDLEDATEAEAE"
     gene            2300..3169
                     /locus_tag="VFV26_03560"
     CDS             2300..3169
                     /locus_tag="VFV26_03560"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX4845269.1"
                     /translation="MANATHLRWKLEVPDSQEEALCAWLEEGGSSAFYREADPPRACF
                     AYFPPDQVPPETGGLAAFPGVRLIEAEAFGDEDWLAKSREGFGAFEVGSSFHVRPLWD
                     ERPGPVDRMDLVVNPGLAFGTGGHETTRLCMELLEELAATGRLKGPVLDIGAGTGILS
                     LAAFLLGGRGLTAFDIDPDCGPAMTELMELNAHLLKGAKPYDSFVGTLDHPKVQGPYA
                     GLLANILLETIQELLPRMAEVAAPGGWLVASGILAERTDEALVSLVSHGFKPEKVLKE
                     GEWIAILAVRAAS"
     gene            3288..4079
                     /gene="murI"
                     /locus_tag="VFV26_03565"
     CDS             3288..4079
                     /gene="murI"
                     /locus_tag="VFV26_03565"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEX4845270.1"
                     /translation="MSRADRPIGVFDSGIGGLTVIHALRQMLPQEELVYLGDTARLPY
                     GTKSHHTIERYTLQMGELLQRHDPKLIVIACNTASAHGLPALQAVSPCPVIGVIEPGA
                     EAAAEHAGPVGIIGTLATVGSAAYDLAIHRRDPAKAIHSVACPLLVPLAEEGWFDDPV
                     TDSICRRYLNQLPFEVKTVVLGCTHYPTLLPSLERCRPGTRWIDSGRVTARAVDRLLQ
                     GSLGYRTASARGGLRIQLTDASSRLKEVGSRFLEEPLGDVEVVEI"
BASE COUNT          639 a         1514 c         1477 g          647 t
ORIGIN      
        1 gttctcgggg ggaacctggc agcggcatgc gcacacgtcc ccgcagggac tgagcctggg
       61 aagcgggcga ttcggctcgg acggaagctt ccgggccttc gcctacgatt cggccttcca
      121 ggcggggctc ttccagatgc tgccggatgg gacggccgcc acccagttcg tgcccggcat
      181 gccccgcggg gagcgctggg ggcccttcga gacaccctct ggaaacctgg tgaccctcca
      241 ccaggattca gtcggctggt accagggggt ccgcactccg gggggtaact ggtcgttcca
      301 tctcctgtcc ggcgcggatc cagccgtctt aaggccattc agctgccggg gcgtccaggt
      361 ggacgcccag ggcgtgttgc acgcgatctt cgcggcagag ggtcccgagc tccgggtgga
      421 ctacctgaag gtggcggcgg acgggacggc gcagctccag aacgtgtgca ccggggtcag
      481 cgcctatgcc tggggccggg tgggcgatct agctgtcacg ccggatggcg ggagggtcgg
      541 gttcgccatc atggacggct cgggcgtgct gaggacgggc acgaagtccg gaaccgggga
      601 ctggagcctg aagacggcca cggtgcccga tgcggccatc aactacgtgg tgcccttcat
      661 caagtgcggc ttcctcggga acggccggtt ctgggtgctc cacgatgtgg tgatccaccc
      721 tgccctggcg gaatccgagc gctgcttcga gctgctggaa gcgcccgcca caccctgatc
      781 gaacccacgt catttttttg acttgacccc tagcgccctg catctaggct ggttccatcc
      841 aaggagccca tgactcagct gccccgcctt cactggtcca ccctcgggga cgacaccggg
      901 gggctggagc atcggtgggc ggcgttgtgg gacatcacgg tggaccgggg tgcctcgccc
      961 gccctggcgc cgcgggatgt ggatctgtgg gtcatcagcg ccaagggcgc ctggccgccg
     1021 ccggagttga accgcatgat ggccgaagtg gcggccctgc ccatcctgct gggcctcagg
     1081 cccgagtcgg cgcccatgga tcccaaggcc ctttccgaat ggggttcgct gggcagcgtg
     1141 cgctggggcg tgctgggccc cgagccgccc atgccgggtc tgcgtccccg ctcgggtacc
     1201 accacgcagc tgagcgcctc ccaggcgctc gccttcggcc tggtgggcac cagccccgcc
     1261 atgcaggacg tgctggcccg ggcccgcagc gccgccgcca cccgcgccac ggtgctgctg
     1321 ctgggggaga gcggcacggg caaggaggtc atcgcccgcg cgatccatcg catgagcgcc
     1381 gacgccagcc agcccttcgt ggccgtccac tgcggcgcca tccccgagaa cctgctggaa
     1441 tccgagctct tcggctacaa caagggcgcc ttcacggacg cccgcaagga cacgccgggc
     1501 aagttccgcg aggcgcacgg cggcaccatc ttcctggacg aggtgggcac catgcccctg
     1561 ggcgcccagg tgcgcctgct gcgggtgctg caggagcgcg aggtgcagcc cctgggtggc
     1621 ggcgcgcccg tgaaggtgga cgtgcgcgtg gtgacggcct ccaacgtgga tctctggaag
     1681 aaggtgcagg acggcagctt ccgcgaggat ctgttctacc gcctggaggt ggtgcccatc
     1741 accctgccgc ccctgcgggc gcggcccgag gagatcccct tcctggccca gcacttcctc
     1801 aaccgcaagg cccgcgagca cggcctctac cccaaggccc tgcaccccag cgtggacccc
     1861 ctgctcatgg ccctgccctg gcccggcaac gtgcgccagc tggagaacgc catcgagcgc
     1921 gccatcgtgc tgtcgggcac gcggcccgtg ctcacgcggg aggacttcgc cttcctcgcg
     1981 gagcgcatgt cggaagcccc cgcggccgaa ggggggacga aggtggattt cacgcccctg
     2041 cccgtcagcg ccttctcccc cgccccctcc gcggccttcg gcatggacct gcccgccgag
     2101 ggcctggacc tgaaccaggt ggtgtcggac atggagaaga ccctcatgct gcagagcctg
     2161 gccatcaccc gcggcaacaa gaagcgggcc gccgacctgc tgggcctcaa gcgcaccacc
     2221 ttcctggaaa agatgaagcg cctcgatctg gaggacgcca cggaggcgga ggccgagtag
     2281 cgcctgttaa tctggcggga tggcgaacgc gacgcatctg aggtggaagc tggaggtccc
     2341 cgactcccag gaagaggcgc tgtgcgcctg gctggaggag gggggaagct ccgccttcta
     2401 ccgcgaggcg gatccgcccc gggcctgctt cgcctacttc cccccggacc aggtgccccc
     2461 ggagaccggc ggcctggcgg cctttcccgg cgtgcggctg atcgaggccg aggccttcgg
     2521 cgacgaggac tggctggcca agagccgcga gggcttcggg gccttcgagg tgggctccag
     2581 cttccacgtc cggcccctct gggacgaaag gccgggcccc gtggatcgca tggacctggt
     2641 ggtgaatccg ggcctggcct tcggcaccgg cggccacgag accacgcgcc tctgcatgga
     2701 gctgctggag gagctggccg ccaccggccg cctgaagggc cccgtcctcg acatcggcgc
     2761 gggcacgggc atcctttcgc tggcggcctt cctcctgggc ggccggggcc tcacggcctt
     2821 cgacatcgat cccgactgcg ggcccgccat gaccgagctc atggagctga acgcccacct
     2881 gctgaagggc gccaaaccat acgacagctt cgtgggcacc ctggaccacc cgaaggtgca
     2941 gggcccctat gcgggcctgc tggccaacat cctgctggag accatccagg agctgctgcc
     3001 ccgcatggcc gaagtggccg cgcccggcgg ctggctcgtg gccagcggca tcctggccga
     3061 gcgcacggac gaggccctgg tgagcctcgt gtcgcacggg ttcaagccgg agaaggtgct
     3121 gaaggagggc gagtggatcg ccatcctggc ggttcgggcg gcgtcatgaa cggattcacc
     3181 acggagacac cgagatcacg gagaagagag cacggaggct cccaggggtc tccggtcctt
     3241 tctccgtgtt cctcctctgc gtcctccgtg tctccgtggt ggtctttatg agccgcgcgg
     3301 accgccccat cggggtcttc gattcgggca tcggcgggct cacggtcatc cacgccctgc
     3361 gccagatgct gccgcaggag gagctggtct acctgggcga cacggcgcgc ctgccctacg
     3421 gcaccaagag ccaccacacc atcgagcgct acacgctgca gatgggcgaa ctgcttcagc
     3481 gccacgaccc caagctcatc gtcatcgcct gcaacaccgc cagcgcccac ggcctgccgg
     3541 ccctccaggc cgtgagcccc tgcccggtga tcggcgtcat cgagcccggc gccgaagccg
     3601 ccgcggagca tgcgggcccc gtgggcatca tcgggaccct ggccaccgtg ggcagcgcgg
     3661 cctacgacct ggccatccac cgccgcgacc ccgccaaggc catccacagt gtggcctgcc
     3721 ccctgctggt gcccctggcg gaggagggct ggttcgacga tcccgtcacc gacagcatct
     3781 gccgccgcta cctgaaccag ctgcccttcg aggtgaagac cgtggtgctg ggctgcaccc
     3841 actaccccac cctgctgccc agtctggagc gctgccgtcc cggcacgcgc tggatcgaca
     3901 gcggccgggt caccgccagg gccgtggacc gcctgctgca gggcagcctc ggctaccgca
     3961 ccgccagcgc ccgcggcggc ctccgcattc agctcacgga cgccagcagc cgcctgaagg
     4021 aagtgggcag ccgcttcctg gaagagccgc tgggggatgt ggaagtcgtg gagatttagg
     4081 gtttgttttc aacgtggaag cgagccgcga catgaccgtg aaacctgaga tccgcgagat
     4141 ccggcccgaa gagtccggag cgctgggcca gctgctggtc gcggtctatt ccgcgctcga
     4201 gggcttcccc acgccggcgg agcagccggg gtactacgcg atgctggcca acatcggaca
     4261 gttctcggaa cgaccgg
//
LOCUS       DASUDT010000171         2910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1797942, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000171 DASUDT010000000
VERSION     DASUDT010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797942"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..2031
                     /locus_tag="VFV26_03570"
     CDS             193..2031
                     /locus_tag="VFV26_03570"
                     /inference="COORDINATES: protein motif:HMM:NF015859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE domain-containing protein"
                     /protein_id="HEX4845271.1"
                     /translation="MGEYLDSAPAAPPVPGPTLLRKRRGEGLGWAPWLALAVLAGSLG
                     LTFRVWAQARASARQEIRAYFDFRARDALSRMTQRLATYEQVLRGVRGLFYASDQVSR
                     REFSAYVASLNLEEHHPGIQGLGYAALVPRAKAGRHVEAIRREGFPTYTLWPPGERDP
                     LSAIVYLEPFSGRNLRAFGYDMYSEPVRREAMARAWQTGATALSAKVTLVQETGRDVQ
                     SGFLMYLPVYAKGGEPGRNLEGWVYVPFRMADFMADVLGERAEDLDVEIYDRGVPGLG
                     TLMYDRDPGHAGLLPPPGLGSRHVLEFGGHRWTVAIRALPRLEARLRRDSSIQVLIVG
                     SLGSLLAATLVWGLALGRERALALAEARKLQVEAQRLHHQGAIGTLAKGLAHDFNNLM
                     QSILSWVYLARLNAEPGGKVAQALDHVEVGSAQARELSERLHLLSDAPDLLDSQGPVA
                     PLLQQAVAEALAGSAVQARFELEAADGVVRHQATQLQAAFTHVAINAREAMEGQGNLV
                     VSLRQQVFPEGEDLPVPNPGPYLDVAFADTGPGIDPAVLPLIFEPYVSTKQTFSKKGL
                     GLGLALCRIIMQRHGGAITAESRRGGGATIHLYLPLAPEEGAAGHS"
     gene            2114..>2910
                     /locus_tag="VFV26_03575"
     CDS             2114..>2910
                     /locus_tag="VFV26_03575"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF010621.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4845272.1"
                     /translation="MVKRLWAAVKGSFASSVLAANAVAIFSGMIPFALVKLALPFAAV
                     RRGVDRVLMGLAEGWIAVNGAWMALVQRIRWDVQGLDGLRRRGWYLVSSNHQSWVDIL
                     VLQKVFHRKVPFLKFFLKRQLLFVPVMGLAWWALDFPFMRRRSGSRAKDLATARKACE
                     KFRQVPTSVMNFLEGTRFCPAKQAAQQSPYRHLLKPKVGGLATALGAMGERFDALLDV
                     TIVYPEGVPSFWDLLSGQMSRVVVRVHEREIPAHLLGGDYEGDAAFRA"
BASE COUNT          396 a          959 c         1080 g          475 t
ORIGIN      
        1 atcacgctct accgcgggcc gctgttggag gactgcgtgg acgaggagga cctccgcggg
       61 gagatcgcca cgacggtcat ccacgagatc gcccaccact tcggcatcga cgaggcgcgc
      121 ctggaggagc tgggctgggg ctagaactta tccggggagg cgggctggcc gaagggggac
      181 tgtctgcttt ggatgggaga gtacctggac tctgcacccg ccgccccacc ggtcccgggc
      241 ccgacgctcc tgcggaagcg ccgcggcgag ggtctggggt gggccccgtg gctggcgctg
      301 gccgtgctgg cgggcagcct gggcctcacc ttcagggtct gggcgcaggc gcgggccagc
      361 gcccggcagg agatccgggc ctatttcgat ttccgcgccc gcgatgcgct ctcccgcatg
      421 acccagcgcc tggccaccta cgagcaggtg ctgcgggggg tgcgagggct cttctacgcc
      481 agcgaccagg tgagccgccg cgagttctcc gcctacgtgg ccagcctgaa cctggaagaa
      541 caccatccgg gcatccaggg gttgggctat gcagcgctgg tcccgcgggc caaggccggg
      601 cggcatgtgg aggccatccg ccgggaggga ttccccacct acaccctgtg gcccccgggg
      661 gagcgggatc cgctctccgc catcgtctac ctggagccct tctcggggcg caatctgcgg
      721 gccttcggct atgacatgta ctcggaaccg gtgcggcgcg aggccatggc gcgggcctgg
      781 cagacggggg ccacggccct gtcggccaag gtgacgctgg tgcaggagac ggggcgggat
      841 gtgcagtcgg gattcctgat gtacctcccg gtctacgcga agggcgggga gcccgggcgg
      901 aacctggagg ggtgggtgta cgtccccttc cgcatggccg acttcatggc ggatgtactg
      961 ggcgagcggg ccgaggacct ggatgtcgag atctatgaca ggggcgttcc ggggctggga
     1021 accctgatgt acgaccggga tcccgggcat gccggcctgc ttcccccgcc ggggctgggt
     1081 tcgcggcatg tcctggagtt cggggggcat cgctggacgg tggccatccg cgccctgccc
     1141 cgactggaag cccgattgcg ccgggacagt tccatccagg tgctgatcgt cgggagcctg
     1201 ggcagcctgc tggcggccac gctcgtctgg ggtctggccc tgggccggga acgggccctg
     1261 gccctggcgg aggcccgcaa gctccaggtg gaggctcagc gcctgcatca tcagggggcc
     1321 atcggtaccc tggccaaggg gctggcccat gacttcaaca acctgatgca gtcgatcctc
     1381 tcctgggtct acctggcgcg cctgaatgcc gagcccggcg gcaaggtggc ccaggctctg
     1441 gatcacgtgg aggtgggctc ggcccaggcc cgggaacttt cggagcgcct gcacctcctg
     1501 agtgatgctc cggacctgct ggacagccag ggtcccgtgg cgccgttgct ccagcaggcc
     1561 gtggccgagg cgctggccgg cagcgcggtc caggcgcgct tcgagctgga ggccgccgat
     1621 ggggtggtgc gccaccaggc cacccagctc caggcggcct tcacccatgt ggccatcaat
     1681 gcccgcgagg ccatggaggg gcagggaaac ctggtggtgt ccctgcgcca gcaggttttc
     1741 ccggaagggg aggatctgcc ggtccccaac cccggtccct accttgacgt ggccttcgcg
     1801 gatacggggc ctggcatcga tccggccgtg ctgccgctga tcttcgaacc ctatgtctcc
     1861 accaagcaga ctttcagcaa gaagggcttg gggctggggt tggccctgtg ccgcatcatc
     1921 atgcagcgtc atgggggtgc catcaccgcc gagtcgcggc gcggcggcgg ggccacgatc
     1981 cacctctacc tgcccctcgc gccagaggag ggggcggctg ggcactctta accggcttct
     2041 tccggcgggc cacctcgtcg gataatggaa gcctcgcagg tgcccctggg ggccgtcgca
     2101 tcggggggat cgcatggtca agcgcctgtg ggcggcggtc aagggcagct tcgccagttc
     2161 ggtgctggcg gccaacgccg tggccatctt ttcgggcatg atccccttcg cgctggtgaa
     2221 gctggcgctg cccttcgcgg cggtgcgccg gggcgtggac cgcgtgctca tgggcctggc
     2281 cgagggctgg atcgccgtga acggcgcctg gatggcgctg gtgcagcgca tccgctggga
     2341 tgtgcagggc ctggacgggc tgcggcgccg gggctggtac ctggtgagca gcaaccatca
     2401 gagctgggtg gacatcctgg tgctgcagaa ggtcttccac cggaaggtgc ccttcctgaa
     2461 gttcttcctc aagcggcaac tgctcttcgt gccggtcatg gggctggcct ggtgggccct
     2521 ggacttcccc ttcatgcgcc gccgcagcgg cagccgggcc aaggatctgg ccacggcccg
     2581 caaggcctgc gagaagttcc gccaggtccc cacctcggtg atgaacttcc tggagggcac
     2641 gcggttctgc cccgccaagc aggcggccca gcagtcgccc taccggcacc tgctgaaacc
     2701 gaaggtgggc gggctcgcca cggcgctggg cgccatgggc gagcgcttcg atgccctgct
     2761 ggacgtcacc atcgtctacc ccgagggcgt gcccagcttc tgggatctgc tgtcgggcca
     2821 gatgagccgg gtggtggtgc gcgtccacga gcgcgagatc ccggcgcacc tgctgggcgg
     2881 cgactacgag ggggacgcgg ccttccgggc
//
LOCUS       DASUDT010000172         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2041222, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000172 DASUDT010000000
VERSION     DASUDT010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041222"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..850)
                     /locus_tag="VFV26_03580"
     CDS             complement(68..850)
                     /locus_tag="VFV26_03580"
                     /EC_number="1.13.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol ring-cleavage dioxygenase"
                     /protein_id="HEX4845273.1"
                     /translation="MEWSGSLPSVFTAHGSPLLALDGRAWGEAVWTLGSALPPLRGIL
                     VCSAHWEAGGPFRLSSGDRPGVMHDFGGFPEALYALDYPAPGSPVLAAEAAALLRTAG
                     LEADLDARRPLDHGAWVPLRYLAPEAAVPVVQLSLPRPRTPELLMAAGRALAPLRQSG
                     VLILGSGGIVHNLRRLDWEETSDPQPWALAFQGWVQGRLAAWDLKGLADWRQAPGAAE
                     SVPTSEHLDPLFLALGAAGGPPEPVFEGWQLGSLSLASYRFD"
     gene            977..1705
                     /locus_tag="VFV26_03585"
     CDS             977..1705
                     /locus_tag="VFV26_03585"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX4845274.1"
                     /translation="MTLRLGVNIDHVATLRQARGGHEPEPVAAALLAQSAGAHGITVH
                     LRGDRRHIQDRDLRVLKEVLAIPLNVECATTPEVLEAVVPSRPSWVTLVPESREELTT
                     QGGLDAIFLQGMLRPVMRELHSAGIRVSLFVDPVLDQVKMAAKLEADAVELNTGIYSD
                     LPMDSDASLELGRIRDAARLGNRLGLRVLAGHGLDLHNVGPIAAIPEIEELNIGHSLI
                     GRAVLVGLERAVEEMLAAMSETRP"
     gene            1702..2520
                     /locus_tag="VFV26_03590"
     CDS             1702..2520
                     /locus_tag="VFV26_03590"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX4845275.1"
                     /translation="MSNLRGTLESIALTDVAQLLHVNRKTGMLQVTSGKVSGVLYFSR
                     GEVIHAETLSARGEQAAFEILEWVSGNFEFLTTQVQIPASIRRTVPDLLMDSARLQDS
                     RKRLHSIFPRLTAVPWPTMRPPQLLEGLKVFAEDRRILPFFDGYRDFQDIMAATGQHD
                     VAVLQAASLLKDAGRLEVLEPDAYVTVSELKTGLFKKADYLGLPTAMEGWWTVLGPYR
                     HGINHLRVIWPKGPAVERVEFIPGLPEKHLAIPRELMQAWDLAEGAHVKVRPAP"
     gene            2540..3466
                     /locus_tag="VFV26_03595"
     CDS             2540..3466
                     /locus_tag="VFV26_03595"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HEX4845276.1"
                     /translation="MTDIPDDPIPAGTADSLVAEFQARRGRLDERLVSLESLIGELRQ
                     ELQGDSQASLYRLAQAAQDMANGRVYQKVDIEAKGELGALVTSINQTLLNLQQLDASV
                     KQQSTQVPELAAQLDAITSDTEEATQSVMNRLDTLMAACDGATRAIQDCQQGLGRQNE
                     HQAALQKAVEGFLERAASGADQATLAQEVLEFLFAHQVAVPAQSVDLGPTKALLQQVS
                     DEAFEILNILQFQDITRQKIEKVVILLKKFQNGLNRLLVIFNIHTGAAITESFGERRV
                     ATQDRIFDTSLEADSRKDSVDDIIAQFKKGGS"
BASE COUNT          651 a         1276 c         1175 g          528 t
ORIGIN      
        1 tcccttgtgc tcatgctccg tacctccgtg gtggatcatt gcgatcgaaa agccaaccgg
       61 gatgaattca atcgaaccgg tagctcgcca ggctgaggct gcccagctgc cagccttcga
      121 agaccggctc gggcgggccc ccggcggcgc ccagcgccag gaacaggggg tccagatgct
      181 cggacgtggg cactgattcc gcggcgccgg gagcctgcct ccagtccgcc agccccttca
      241 ggtcccaggc cgccaggcgc ccctggaccc agccctggaa ggccagggcc cagggctgcg
      301 gatccgaggt ctcctcccag tccaggcgcc tgagattgtg gacgatgccg ccgctgccca
      361 ggatcaggac gccggattgc cgcaggggcg ccagggcgcg gcccgcggcc atgagcagct
      421 ccggagtccg gggccggggc agtgaaagct gcaccacggg aacagcggcc tccggggcca
      481 ggtagcgcaa aggcacccag gcgccgtggt ccagggggcg tcgggcatcc agatccgcct
      541 ccagccccgc cgtccggagc agggccgcgg cttcggcggc cagcaccggc gatccgggcg
      601 cggggtagtc cagggcatac agcgcttcgg ggaaaccccc gaaatcatgc atgacaccgg
      661 gcctgtcccc cgacgaaaga cggaacggcc cccctgcctc ccagtgggcc gaacaaacca
      721 ggatgccccg caggggcggc agcgcggacc ccagggtcca taccgcctcg ccccaggctc
      781 tgccgtccag ggccagcagg ggcgaaccgt gggcggtaaa aaccgagggg agcgagccgg
      841 accattccat ggattcaagg gtggcatctc catttagatg tttcaactcc ttttgcaaaa
      901 ccttgtgctg ggccgggggg gcgccgatga aatcagcaga aggtaagcta agctggatca
      961 gtccctggag cccgcattga cccttaggct aggtgtgaac atcgatcatg tggccaccct
     1021 ccggcaggcc cggggtggcc atgaaccgga gcccgtggcg gccgccctgc tggcgcagag
     1081 tgccggggcc cacggcatca cggtccacct ccgcggggac cggcggcaca ttcaggatcg
     1141 cgatctcagg gtactgaagg aagtcctggc gattccgctg aacgtggaat gtgccaccac
     1201 ccccgaagtg cttgaagccg tcgtgccctc caggccgtcc tgggtgaccc tggtcccgga
     1261 aagccgcgag gaactcacca cccagggtgg cctcgatgcc attttcctcc agggcatgct
     1321 gcgccccgtg atgcgggagc tccacagcgc aggcatccgc gtgagtctct tcgtggatcc
     1381 cgtcctggac caggtgaaga tggccgccaa gctggaggcg gacgcggtgg agctgaacac
     1441 gggcatctac agcgacctgc ccatggattc cgacgcctcc ctcgagctgg gccggatccg
     1501 cgacgccgcc cgcctgggga accggctggg cctgcgcgtc ctcgcgggcc acggactgga
     1561 cctccacaat gtcggcccca tcgccgccat ccccgagatc gaggagctga acatcggcca
     1621 cagcctcatc gggcgggccg tgctggtggg gcttgagcgg gccgtggaag agatgctcgc
     1681 cgccatgtcg gagacccgcc cttgagcaac ctccgcggca cattggaaag catcgccctc
     1741 acggatgtgg cgcagctgct ccacgtcaac cgcaagacgg ggatgctcca ggtgacgtcg
     1801 ggaaaggtga gcggcgtgct ctacttctcc cgcggcgagg tcatccacgc cgagaccctc
     1861 tcggcccgcg gcgagcaggc cgccttcgag attctcgagt gggtgtccgg gaacttcgag
     1921 ttcctcacca cccaggtcca gatccccgcc tccatccgcc gcaccgtgcc ggacctgctc
     1981 atggattcgg cccgactcca ggacagccgg aagcgcctgc atagcatctt cccccggctc
     2041 actgccgtgc cctggcccac catgcggcca ccccagcttc tggagggcct caaggtcttc
     2101 gctgaagacc gccggatcct ccccttcttc gatggctacc gcgatttcca ggacatcatg
     2161 gccgccacgg gacagcatga tgtcgccgtg ctccaggcgg cctcgctcct caaggacgcg
     2221 ggccggctcg aggtgctgga accggatgcc tacgtcaccg tgtccgaact gaagaccggc
     2281 ctcttcaaga aggccgacta cctggggctg cccacggcca tggagggctg gtggaccgtt
     2341 ctggggccct accgccacgg catcaaccat ctgcgggtca tctggcccaa gggtccggcg
     2401 gtggagcggg tggaattcat ccccggcctg ccggaaaagc acctcgccat tccgcgggaa
     2461 ctcatgcagg cctgggatct ggccgaagga gcccacgtga aggtgcgccc cgcaccctga
     2521 tggacccctg ggagtaacca tgaccgacat cccagatgat ccgatccccg ccggcaccgc
     2581 cgacagcctg gtggccgaat tccaggcgcg caggggacgc ctggacgagc gtcttgtcag
     2641 cctggaatcc ctgatcggcg aactccgcca ggagctgcag ggggactccc aggccagcct
     2701 ctaccgcctc gcccaggcgg cccaggacat ggccaatggc cgggtgtacc agaaggtcga
     2761 tatcgaggcc aagggggagc tgggcgccct ggtcaccagc atcaaccaga ccctgctcaa
     2821 cctccagcag ctggatgcct cggtgaagca gcagagcacc caggttcccg agctcgccgc
     2881 ccagctcgat gccatcacct ccgacaccga ggaggccacc cagagcgtca tgaaccgcct
     2941 ggacaccctg atggccgcct gtgatggtgc cacccgggcg atccaggatt gccagcaggg
     3001 cctggggcgg cagaacgagc atcaagccgc ccttcagaag gccgtcgagg gcttcctcga
     3061 gcgggccgcc agcggcgccg accaggccac cctggcccag gaagtcctgg agttcctatt
     3121 cgcccaccag gtggccgtcc cggcccagtc cgtggacctc ggccccacca aggccctgct
     3181 ccagcaggtg agcgatgagg ccttcgagat cctcaacatc ctccagttcc aggacatcac
     3241 gcgccagaag atcgagaagg tggtgatcct cctcaagaag ttccagaacg ggctcaaccg
     3301 cctgctggtg atcttcaaca tccataccgg cgctgcgatc acggagagct tcggcgagcg
     3361 ccgggtggcc acccaggacc gcattttcga caccagcctc gaggccgaca gccgcaagga
     3421 cagcgtcgac gacatcatcg cccagttcaa gaagggtgga agctgaggcc tggcggggtc
     3481 agaccagggc gatctccagc tccccgacgc cctggatgcc gcagcggacc cggtttccac
     3541 gaaccagggc ccccacgccc gaaggcgtcc ctgtgaagat gaggtcgccc ggggccagga
     3601 gcatgtaggc cgacaggtgg gcgatcacct
//
LOCUS       DASUDT010000173         3284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_803666, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000173 DASUDT010000000
VERSION     DASUDT010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_803666"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..1269)
                     /locus_tag="VFV26_03600"
     CDS             complement(235..1269)
                     /locus_tag="VFV26_03600"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4845277.1"
                     /translation="MSTADLHHPAIPVSYARLLVELCQRWHVAPEELMADTALARVEP
                     HVLDVRLTPLEFNLLVARALRLTGEPALGYHFGLQTKLSAHGFLGYAVMTSATLGDAI
                     ALTEKFFGTRSGALDFRFFVEGETAVVQIDNTADIKPPFAFPYESLLIGLCHAGAYIT
                     GESSMDAEIWIDFPEPAYYQAHAHLLPCPIRYGKGLNQLRFPARLLQKPLLLADATAT
                     QLAREQCERELEALSSKPLVTRVRALLGEDMSTMPDLETVARRCCMSARSLKRKLAEQ
                     GVSFSELVAEMRHDEAVLLLAEGRLSIEQIAERLGYRDPANFTRAFKAWTGSTPRQYR
                     DRIRSSSARV"
     gene            1483..2310
                     /locus_tag="VFV26_03605"
     CDS             1483..2310
                     /locus_tag="VFV26_03605"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX4845278.1"
                     /translation="MTAQAQIKSSFPVRRMDFGFSDVPKYWFHDDPFLTHFLTSLSSL
                     FPEGEFFFVTSMRNIRDQIDDPVLQKEISAFIGQEAMHSKEHKAFNDYATAHGIDVDY
                     LHRRVGKLLKFGHRILTHKQQVAVTCALEHFTATIAKQLLVREDWSSRMNDPVMKKMW
                     LWHAVEESEHKSVCYDAYQRLYPNTYATRSSFMVLAWSILALVLAEQQVRLMAKDGQL
                     FNVKSWARGMWGLFGYKGFLTQLTLQLLDYFRPGFHPEDHFSDDLEKKYKEILSLQG"
     gene            2519..>3284
                     /locus_tag="VFV26_03610"
     CDS             2519..>3284
                     /locus_tag="VFV26_03610"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX4845279.1"
                     /translation="MSAHAPAPVRRVNKSAIQPRRMDFQFDPDMPRYWFGGSQFKSLL
                     LTALSCTFPEGERFFVRSVRHYQPHIRSELLKEEVKGFIGQEAHHGNEHEAFNRLMQE
                     KGIPTRKVEEFVLNGLKWQAKRMSPERQLAKTAALEHFTAMLAEMMLEHPEFLDGMHK
                     DLLPLWLWHAVEESEHKTVAFDVYQEQVGSYWIRSSEMALTTVEFIGFTVFHYFQLRA
                     EMDDPTDWASVREGWNWLLGRPGFLRKLAPAYLAYYK"
BASE COUNT          574 a         1125 c         1082 g          503 t
ORIGIN      
        1 cccgggtttg gcgggcccgt aggacaggca gggcgctgtc cgggtgcgct gcaccgcccc
       61 cgcggcagtg gcgggagcgg aggcgcgagc cggcggccac ggacggagga cgcagcccgg
      121 gcacaacggg aagcctgggc gggatggggg tagggggtag ccgccgcagg gcgggtgcac
      181 cctgcccccc agcccgcgaa aagcaccggc gggtatcccg gcgcagaaaa aacctcaaac
      241 gcgggcgctg gaagagcgga tccggtcccg gtactggcgc ggggtggacc ccgtccaggc
      301 cttgaaggcg cgggtgaagt tggcggggtc gcggtagccc aggcgctcgg cgatctgctc
      361 gatgctgagc cggccctcgg ccagcagcag cacggcctcg tcgtggcgca tctcggccac
      421 cagctcggag aagctcacgc cctgctcggc cagcttgcgc ttgagggagc gggcggacat
      481 gcagcagcgc cgggccacgg tctccaggtc gggcatggtg ctcatgtcct cgcccagcag
      541 ggcgcgcacg cgcgtcacca ggggcttgga ggacagtgcc tccagctcgc gctcgcactg
      601 ctcgcgcgcc agctgggtgg cggtggcatc ggccagcagc aggggcttct gcagcaggcg
      661 ggccgggaag cgcagctggt tcaggccctt gccgtagcgg atggggcagg gcagcaggtg
      721 ggcatgggcc tggtagtagg cgggctcggg gaagtcgatc cagatctcgg cgtccatgct
      781 ggattcgccg gtgatgtagg cgccggcatg gcagaggccg atgagcaggc tttcgtaggg
      841 gaaggcgaag ggcggcttga tgtcggcggt gttgtcgatc tgcaccacgg ccgtttcgcc
      901 ctccacgaag aagcggaagt ccagggcgcc ggaacgggtg ccgaagaact tctcggtgag
      961 ggcgatggcg tcgcccaggg tggcggaggt catcaccgca tagcccagga agccgtgggc
     1021 ggagagcttg gtctgcaggc cgaagtggta gcccagagcg ggctcgccgg tcaggcgcag
     1081 ggcccgcgcc accagcaggt tgaactccag gggcgtcagg cggacgtcca ggacatgcgg
     1141 ctccacccgg gccagggcgg tgtccgccat gagctcctcg ggggccacgt gccagcgctg
     1201 gcacagctcc acgaggagcc gggcatagct gaccgggatg gccgggtggt ggagatccgc
     1261 cgttgacata gtctggcccc gtttaaccga agggatgcgt tattggcccg aaatgaccta
     1321 gcgggccgcc tgagctgctg gcaatactta catcgtccaa tgacacattc aatgacgaaa
     1381 cccgaaagtg tcgccccgct gcccgaagcg actggaatcc tagccgtaaa gccccccccg
     1441 ggtcacggcc ggcagcccca agccccagac caggagcaaa cgatgaccgc ccaggcccag
     1501 atcaagtcca gcttccccgt ccgccgcatg gacttcggct tctctgacgt gcccaagtac
     1561 tggttccacg acgatccctt cctgacccat ttcctgacca gcctgtcgtc gctgttcccg
     1621 gaaggcgagt tcttcttcgt gaccagcatg cgcaacatcc gcgaccagat cgacgatccg
     1681 gtcctgcaga aggaaatctc ggccttcatc ggccaggaag ccatgcactc caaggagcac
     1741 aaggccttca acgactatgc caccgcccac ggcatcgacg tcgactacct gcaccgccgc
     1801 gtcggcaagc tcctgaagtt cggccacagg atcctgaccc acaagcagca ggtcgccgtc
     1861 acctgcgccc tggagcactt caccgccacc atcgccaagc agctgctggt gcgcgaggac
     1921 tggagctccc gcatgaacga cccggtcatg aagaagatgt ggctgtggca cgccgtggag
     1981 gagtccgagc acaagagcgt gtgctacgac gcctaccagc gcctctaccc caacacctat
     2041 gccacccgct cctccttcat ggtgctggcc tggtccatcc tggccctggt gctggccgag
     2101 cagcaggtgc gcctgatggc gaaggacggc cagctcttca acgtgaagtc ctgggcccgc
     2161 ggcatgtggg gcctgtttgg ctacaagggc ttcctgaccc agctgaccct gcagctgctg
     2221 gactacttcc gcccgggctt ccacccggaa gaccacttca gcgacgacct ggagaagaag
     2281 tacaaggaaa tcctctccct ccagggctaa gccttacccc ctttacccct ttgggcgcgg
     2341 ccaatgactg gccgcgccct gttttattcc cgcctctctt attccccctc ccccgcgccg
     2401 cccgccgcgc cccggcccgg gcagcttggc cccatccgac aagaacttgg catcgcccac
     2461 cctgaccggc ccgcccggca cgggggaata ctcgggtcat catccccgga ggcatgccat
     2521 gtccgcccac gccccagccc ctgtccgccg cgtcaacaag agcgcgatcc agccgcgccg
     2581 catggacttc cagttcgacc ccgacatgcc gcgctactgg ttcggcggct cccagttcaa
     2641 gtccctgctg ctcaccgccc tctcctgcac cttccccgag ggcgagcgct tcttcgtgcg
     2701 ctcggtgcgc cactaccagc cgcacatccg cagcgagctg ctgaaggaag aggtcaaggg
     2761 cttcatcggc caggaggccc accacggcaa cgagcacgag gccttcaacc gcctgatgca
     2821 ggagaagggc atccccacgc gcaaggtgga ggagttcgtg ctgaacggcc tcaagtggca
     2881 ggccaagcgc atgtcgccgg agcgccagct ggccaagacc gccgcgctgg aacacttcac
     2941 cgccatgctg gcggaaatga tgctggagca cccggagttc ctggacggca tgcacaagga
     3001 cctgctgccg ctgtggctgt ggcatgccgt ggaggagtcc gagcacaaga cggtggcctt
     3061 cgacgtctac caggagcagg tcggcagcta ctggatccgc agcagcgaga tggcgctgac
     3121 cacggtcgag ttcatcggct tcaccgtctt ccactacttc cagctgcgcg cggagatgga
     3181 cgaccccacc gactgggcct cggtgcgcga gggctggaac tggctgctgg gcaggcccgg
     3241 cttcctgcgc aagctggccc ccgcctacct ggcctactac aagc
//
LOCUS       DASUDT010000174         7275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2195835, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000174 DASUDT010000000
VERSION     DASUDT010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7275
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2195835"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1225
                     /locus_tag="VFV26_03615"
     CDS             <1..1225
                     /locus_tag="VFV26_03615"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4845280.1"
                     /translation="LNGTKAWITNAGFADVFVIFAKINGSHLSAFIVEKTDPGISTGA
                     EEKKMGIKGSSTRTVILENCRIPEDRLLGGKGKGARIALGILNVGRFKLGASSVGAGK
                     RVLEYTLKYAGERTQFGKPLTAFGLIQQKLANMAVRIFVGESMSFRTIGYLDEALDRT
                     SWESETGGADKMKAIDEYAMEASMSKVWGSEALFATADEAVQAFGGAGFSAEYPAEKI
                     YRDCRINRIFEGTNEINRLLIAGTFLKRCGGTDGHPLAAAGAAALQLPEDSLQATVAL
                     AKARALKVIALAQAEHGPKILDNQEAAAHISNLLLELYAMESAVVRAGKMAASGHRWA
                     GLARDMAEVYAQEAWNRVQSEARMLAGELASGAALDALMAELLAMQAPAPLPLSALRN
                     RIAQALIDQGRYPIA"
     gene            1298..1819
                     /locus_tag="VFV26_03620"
     CDS             1298..1819
                     /locus_tag="VFV26_03620"
                     /inference="COORDINATES: protein motif:HMM:NF024818.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX4845281.1"
                     /translation="MSPRPDPTQQERMLAEDDFIVSKTDPKGIITYGNRIFIAISGYS
                     EEELLGSPHNILRHPDMPRAVFKLLWDTLQSRREINAYVKNLAKDGSFYWVFANITPS
                     LDHRGEVIGYYSVRRKPRPEAVRTVAALYRAMLDAERKAGDGQAGMKASLAILNRTLE
                     EKGMGYDEFVLGL"
     gene            1809..3254
                     /locus_tag="VFV26_03625"
     CDS             1809..3254
                     /locus_tag="VFV26_03625"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4845282.1"
                     /translation="MGSRIHHLVAATLGVFLAFAYFAVGSKGLDLRLGLLIGLILALF
                     ALTLWTTYRILHAIDRLASNLQLAAQGNLDQRITRIKKGAATEKLSWALNDLLDQQEA
                     YFREVFSAFDHASRGQTYRIAMDQGLHGAFKDAMTRINVSVESLGQVQQMALKEKLIA
                     RVTDLNSGNLIQNLRSIQDYLLGMTKELGTVGDLSRETASEADASRITIEGIVADLNR
                     VAEMVAGTNAQIEHIHEKSSEITQIVQVITDVADRTNLLALNAAIEAAHAGEVGKGFA
                     VVAEEVRTLSENTKDAAASIASTIESFEQATSRMLADSQVVKEITESSRATVTAFSGS
                     VRRFAESARTSVQQVSRAQDVSFASLVKVDHFLFKQNGYRVVNQGMDSPEAKAVQADH
                     HGCRLGQWYYQGQGAELFARVPSYARLEAPHAQVHSHIHQAVALLGQRWQNDPEIQAK
                     VVAQFEQAERSSEEVVAVIDRMVDERHRTEA"
     gene            complement(3258..3950)
                     /locus_tag="VFV26_03630"
     CDS             complement(3258..3950)
                     /locus_tag="VFV26_03630"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4845283.1"
                     /translation="MPEGRQVQQMFSAIAGRYDVLNHVLSGGVDFWWWWRMARKSGAA
                     PGKRFLDVAAGTGDSSLALARRGAEVVSTDFTHAMLRLGPAKFARKGYAGLIWASSDA
                     DAQRLPFRDGCFDGLTICYGIRNVEDRARAYAEFLRVLKPGGQLTILEFSTPVFPWLR
                     AFYDWYSRRVLPRIGAWISGDASAYTYLPESIRAFPDQEALAAELEAAGFRRVGWTNL
                     TGGIVALHTGIR"
     gene            4176..5960
                     /locus_tag="VFV26_03635"
     CDS             4176..5960
                     /locus_tag="VFV26_03635"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4845284.1"
                     /translation="MSTAAVEQVKGGSFLLTPIGSMPQFTPEEFGDDAKEFARAARDF
                     IQGEILPRDEQIDKLDLPLTVELMKKAGELGLLGLEIPEAYEGMDVDKRTAMLVLEEM
                     SKQGSFAVSYSANTGIGTLPIVYFGTEAQKKAYLPKLATGEWLAAYALTEAGSGSDAL
                     SAKATAILDGDSWVLNGTKMWITNAGFADVFIIFAKVDGQQFSAFIVEKTDPGISTGA
                     EEKKLGIKGSSTRTVILENCRIPKDRLLGEIGKGHKIAFGILNIGRFKLGVGSQGGMK
                     RILEYAIRYTSERQQFGKSINSFGLIQQKLADMATKIFVCEALNFRTIGYLDDALHAT
                     SWDSPTAGADKMAAIDEYTIECSISKVWASEALFSVADEAVQAFGGYGFSAEYPPEKA
                     LRDCRINRIFEGTNEINRLLIAGTLLKRAMKGELPLMQFGQQVAKEISNPVKAESFTG
                     PLARLKHGVELSKRQCMLAAGLAVQVLGQKLIDNQEVMARMSNMLMEIYAMESAVVRA
                     ERMVESGHRWAQIARDITELYVNESWHKVHGDARMLCADVVEGEALRHALAGVKAFTE
                     FHPTSSARLRGRIASELIQKGSYPVDVI"
     gene            complement(6034..>7275)
                     /locus_tag="VFV26_03640"
     CDS             complement(6034..>7275)
                     /locus_tag="VFV26_03640"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEX4845285.1"
                     /translation="HDLDEHGEWVYAEDVNDWVWRPLRVTVDWRPYWRGRWGAYPGGM
                     TWVSDDPWGNVTFHFGRWGWSSRWGWYWSPGVYYSPAWVAWNYTPGYYGWAPLGYYNT
                     PCHWGYGAWGGGYAWNVVSVNHINVVNVRTRIYSDANIIRSFNGATGGSSWNGGGRDL
                     RAPWRRSPLVVSHTEFRNPGQMQTAFQHDVNRQRLATYERQAQAATGRTILRRPAAPV
                     AGPAARPGTPAAGVTRVPFEDRGRGQGAERPLNPRERSFEERPRDRGDERPSPQDRRT
                     DPTPRERPMETRPRSEDRRPDATPRERPMEPRPRVEERRAEPTPRERHVEPRPRLEER
                     RAEPTPRERPMESRPRFDREERRAEPAPRPAERESRPEPRVDPPKREERRESAPEARP
                     SPAPSRPSGGEGRGGGREVRR"
BASE COUNT         1290 a         2567 c         2380 g         1038 t
ORIGIN      
        1 gctgaacggc accaaggcct ggatcaccaa cgccggcttc gccgatgtct tcgtgatctt
       61 cgccaagatc aacggcagcc acctcagcgc cttcatcgtc gaaaagacgg atcccggcat
      121 cagcaccggg gccgaagaaa agaagatggg catcaagggc agttccaccc gcacggtgat
      181 cctggagaac tgccgcattc ccgaggaccg cctgctgggc ggcaagggca agggcgcccg
      241 catcgccctg ggcatcctca acgtgggccg cttcaaactg ggcgccagct ccgtgggcgc
      301 cggcaagcgg gtgctggagt acacgctcaa atacgccggg gagcgcaccc agttcggcaa
      361 gcccctcacc gccttcggcc tcatccagca gaagctggcg aacatggccg tgcggatctt
      421 cgtgggcgaa agcatgagct tccgcaccat cggctatctg gacgaggccc tggaccgcac
      481 cagctgggag agcgaaaccg gcggcgccga caagatgaag gccatcgacg agtacgcgat
      541 ggaggcctcc atgtccaagg tgtggggcag cgaggccctc ttcgccacgg ccgacgaggc
      601 ggtccaggcc ttcggcggcg cgggtttcag cgccgagtac ccggcggaga agatctaccg
      661 ggactgccgc atcaaccgca tcttcgaagg caccaatgag atcaaccgcc tcctcatcgc
      721 gggcaccttc ctcaagcgct gcggcggcac ggacggccac cccctggccg ccgccggggc
      781 cgccgccctc cagctgcccg aagattccct ccaggccacc gtcgccctgg ccaaggcccg
      841 cgctctgaaa gtgatcgccc tggcccaggc ggagcacggc cccaaaattc tggacaacca
      901 ggaggccgcg gcccacatca gcaacctgct gctggaactc tacgccatgg aatccgccgt
      961 ggtccgcgcc gggaagatgg cggcctccgg ccaccgctgg gccgggctgg cccgggacat
     1021 ggccgaggtc tatgcccagg aggcctggaa ccgcgtgcag tccgaggccc gcatgctggc
     1081 cggtgaactg gcctccggag cggccctgga tgcgctcatg gcggagctgc tcgccatgca
     1141 ggcacccgcg ccgctgcccc tctccgccct gcggaaccgc atcgcccagg cactcatcga
     1201 ccaggggagg taccccatcg cctgagccgg gtcttgaggg cgccaaaatt catggcatcc
     1261 agcgcccggg cccgataaca ggggtggaga cccacccatg agccccagac ccgacccgac
     1321 ccagcaggaa cgcatgctgg cggaggacga tttcatcgtg tccaagaccg acccgaaggg
     1381 aatcatcact tacggaaacc ggatcttcat cgcgatctca ggctattcgg aagaggagct
     1441 gctgggctcg ccccacaaca tcctccgcca tccggacatg ccgagggccg tcttcaagct
     1501 gctctgggac accctccagt ccaggcggga gatcaacgcc tacgtgaaga acctggccaa
     1561 ggacggcagc ttctactggg tcttcgcgaa catcacgccc tccctcgacc accggggcga
     1621 ggtcatcggc tactactccg tgcgccgcaa gccccggccc gaggcggtcc ggaccgtggc
     1681 cgccctctac cgggccatgc tcgacgcgga acgcaaggcg ggcgacgggc aggccggcat
     1741 gaaggcctcc ctggccatcc tcaaccggac acttgaagag aagggcatgg gctatgacga
     1801 atttgtcctt gggctctagg atccaccacc tcgtcgccgc gaccctcggg gtgttcctgg
     1861 ccttcgccta ctttgccgtg ggctccaaag gcctggatct ccgcctgggc ctcctgatcg
     1921 gcctcatcct cgccctcttc gccctcaccc tgtggaccac gtaccggatc ctccacgcca
     1981 tcgaccggct ggcctcgaac ctccagcttg ccgcccaggg gaacctggac cagcggatca
     2041 cccgcatcaa gaagggtgcc gccacggaaa agctctcctg ggccctcaac gacctgctgg
     2101 accagcagga ggcctatttc cgggaggtct tctccgcctt cgaccacgcc agccggggcc
     2161 agacctaccg catcgccatg gaccagggcc tccacggcgc cttcaaggac gccatgacgc
     2221 gcatcaacgt ctcggtggaa agcctgggcc aggtccagca gatggccctg aaggagaagc
     2281 tcatcgcccg ggtcacggac ctgaacagcg gcaacctcat ccagaacctg cggtccatcc
     2341 aggactacct gctcggcatg accaaggaac tggggaccgt gggcgacctg tcccgcgaga
     2401 ccgccagcga ggccgacgcc agccgcatca ccatcgaggg catcgtggcc gacctcaacc
     2461 gggtggccga gatggtggcg ggcaccaacg cccagatcga gcacatccac gagaagagtt
     2521 cggagatcac tcagatcgtc caggtgatca cggacgtggc ggaccgcacc aacctgctgg
     2581 ccctgaatgc cgccatcgag gccgcccacg ccggcgaggt gggcaagggc tttgccgtgg
     2641 tggcggagga ggtccgcacc ctctcggaga acaccaagga cgccgccgcc agcatcgcct
     2701 ccaccatcga atccttcgaa caggccacct cccggatgct ggccgactcc caggtggtca
     2761 aggagatcac cgaaagctcc cgggccacgg tcacggcctt cagcggcagc gtgcgccgct
     2821 tcgcggaatc tgcgaggacc tccgtccagc aggtgtcccg ggcccaggat gtgagcttcg
     2881 cctccctggt gaaggtggac cacttcctct tcaagcagaa cggctaccgg gtggtgaacc
     2941 agggcatgga ctcgcccgag gccaaggccg tccaggccga ccatcacggc tgccggctcg
     3001 gccagtggta ctaccagggc cagggcgcgg aactgttcgc ccgcgtgccg tcctatgccc
     3061 ggctggaggc tccccacgcc caggtccaca gccacatcca ccaagccgtc gccctcctgg
     3121 gccagcgctg gcagaacgac ccggagatcc aggccaaggt cgtcgcccag ttcgaacagg
     3181 ctgagcgctc cagcgaggaa gtggtggccg tcatcgaccg catggtggac gaacgccacc
     3241 gcacggaggc ctgaacgcta tcggatcccc gtgtgcaggg ccacgatgcc gcccgtgagg
     3301 ttcgtccagc ccacccggcg gaagcccgcg gcctccagtt cggcggccag ggcctcctga
     3361 tccggaaagg cccggatgct ctccggcaga tacgtatagg ccgaagcgtc accgctgatc
     3421 caggcgccga tgcgcggcag cacccgccgg ctgtaccagt cgtagaaggc cctcagccag
     3481 gggaagacgg gcgtgctgaa ctccaggatg gtgagttggc cgccgggctt cagcacgcgc
     3541 aggaactcgg cgtaggcccg ggcccggtcc tccacattgc ggatgccgta gcagatggtg
     3601 aggccgtcga agcagccatc ccggaagggc agccgctggg cgtcggcatc gctggaggcc
     3661 cagatcagcc ccgcataccc cttccgcgcg aacttcgcgg gccccaggcg cagcatggca
     3721 tgggtgaagt cggtgctgac cacttcggcg ccgcggcggg ccagggccag gctggaatcc
     3781 cccgtcccgg cggccacgtc caggaagcgc ttcccaggcg ccgcgccgga cttccgggcc
     3841 atgcgccacc accaccagaa atccaccccg cccgagagca catggttcag gacgtcgtac
     3901 ctcccggcga tggccgagaa catctgctgc acttgcctgc cttccggcat ccgacctcca
     3961 cgggaacttt cattgaacca gacccggcgc tctacccgaa gtatcggccg gtggtatcag
     4021 cgtcgggctt ggctggcgcg gatacggggg cccggcggga cgtcgtgagc gcagcgagca
     4081 ggcgatcccc ccggagcgca ttgaccgaag gtagaggcta gccaagaccg accccggccc
     4141 ccatcttgat gcctacccca atctggagga cagagatgag caccgccgcc gtcgagcagg
     4201 tcaagggagg cagtttcctg ctgaccccca tcgggtccat gccccagttc acgcccgagg
     4261 aattcggcga tgacgccaag gagttcgccc gtgccgcccg ggacttcatc cagggcgaga
     4321 tcctgcccag ggacgagcag atcgacaagc tggacctccc cctcaccgtg gagctcatga
     4381 agaaggccgg cgaactgggc ctgctgggcc tggagatccc cgaggcctac gagggcatgg
     4441 acgtggacaa gcgcacggcc atgctcgtgc tcgaggagat gagcaagcag ggcagcttcg
     4501 ccgtgagcta cagcgccaac acgggcatcg gaaccctgcc catcgtctac ttcggcaccg
     4561 aagcccagaa gaaggcctac ctgcccaagc tggccaccgg cgagtggctg gcggcctacg
     4621 ccctgaccga ggccggcagc ggctccgacg ccctgagcgc caaggccacc gccatcctgg
     4681 acggggacag ctgggtgctg aacggcacca agatgtggat caccaacgcc ggtttcgccg
     4741 atgtgttcat catcttcgcc aaggtggacg gccagcagtt cagcgccttc atcgtcgaga
     4801 agaccgatcc cggcatcagc accggcgccg aggagaagaa gctgggcatc aagggcagct
     4861 ccacccgcac cgtcatcctc gagaactgcc gcatccccaa ggaccgcctg ctgggcgaga
     4921 tcggcaaggg ccacaagatc gccttcggca tcctcaacat cggccgcttc aagctgggcg
     4981 tgggcagcca gggtggcatg aagcggatcc tggagtacgc catccgctac acctccgagc
     5041 gccagcagtt cgggaaatcc atcaactcct tcggcctcat ccagcagaag ctggcggaca
     5101 tggccaccaa gatcttcgtc tgcgaggccc tgaacttccg caccatcggc tacctggacg
     5161 acgccctcca tgccaccagc tgggacagcc ccacggccgg cgccgacaag atggccgcca
     5221 tcgacgagta caccatcgag tgcagcatct ccaaggtgtg ggccagcgaa gcgctcttct
     5281 ccgtggcgga cgaggccgtg caggccttcg gcggctacgg cttcagcgcc gagtatcccc
     5341 ccgagaaggc cctgcgcgac tgccgcatca accgcatctt cgaaggcacc aacgagatca
     5401 accgcctcct catcgccggc acgctgctga agcgcgccat gaagggcgag ctgcccctca
     5461 tgcagttcgg ccagcaggtg gccaaggaga tctccaaccc cgtcaaggcc gagagcttca
     5521 cgggccccct ggcccgcctc aagcacggcg tggaactcag caagcggcag tgcatgctgg
     5581 ccgcgggcct cgccgtgcag gtgctgggcc agaagctcat cgacaaccag gaggtcatgg
     5641 cccgcatgag caacatgctc atggagatct acgccatgga aagcgccgtg gtgcgcgccg
     5701 agcgcatggt ggagtccggc caccgctggg cccagatcgc ccgcgacatc accgagctct
     5761 acgtgaacga gagctggcac aaggtccacg gcgacgcccg catgctctgc gcggacgtgg
     5821 tcgaaggcga ggccctgcgc cacgccctgg ccggcgtgaa ggccttcacc gagttccacc
     5881 ccaccagcag cgcccggctg cggggccgca tcgcgagcga actgatccag aaaggcagct
     5941 acccggtcga cgtgatctga cgactgcgcc gcggctgcgc ggcggcaata gggaaagggc
     6001 cccggttggg gccctttcct ggtccaggca ctcctagcgc ctgacttcgc ggccaccgcc
     6061 gcggccttct ccgccggagg gacgggaggg cgcgggggag gggcgggctt cgggggcgga
     6121 ttcgcggcgc tcctcgcgct tggggggatc gacccggggt tccggacggg attcccgctc
     6181 ggcgggccgg ggcgcgggtt ccgcacggcg ttcctcacga tcgaaacgcg gccgggattc
     6241 catgggacgc tcccggggcg tgggctccgc ccgccgctct tcgaggcggg gacggggctc
     6301 tacgtgccgt tcccggggcg tgggctcggc tcgccgttct tcaacccggg gacggggttc
     6361 catggggcgc tcccggggcg tggcatccgg gcggcggtcc tccgaacggg gcctggtttc
     6421 catgggacgt tcacggggcg tgggatcagt ccggcggtcc tggggcgacg gccgttcgtc
     6481 cccccggtcc cgcggccgct cttcgaagct gcgttcgcgg ggattcaggg ggcgttcggc
     6541 tccctggccc cggccgcgat cctcgaaggg cacccgcgtc acgcctgcgg cgggggtgcc
     6601 gggccgggcg gccggtcccg cgacgggggc ggcgggacgg cggaggatgg tccggcccgt
     6661 ggcggcctgg gcctggcgtt cgtaggtcgc cagccgctga cggttcacat cgtgctggaa
     6721 agccgtctgc atctggccgg ggttgcggaa ttcggtgtgg gatacgacca ggggcgaccg
     6781 ccgccagggg gcccgcagat ccctgccgcc gccgttccag gaggaacctc cggtggcgcc
     6841 gttgaagctg cggatgatgt tggcatccga gtagatccgg gtgcggacgt tcacgacgtt
     6901 gatgtgattc acggacacca cgttccaggc gtagccgcct ccccaggccc cgtaacccca
     6961 gtggcagggc gtgttgtagt agcccagggg cgcccagccg tagtagccgg gggtgtagtt
     7021 ccaggccacc caggcggggc tgtagtagac gccgggggac cagtaccagc cccagcggga
     7081 gctccagccc cagcggccga agtggaaggt cacgttgccc cagggatcat cgctgaccca
     7141 ggtcatgccg cccgggtacg cgccccagcg gccgcgccag taggggcgcc aatccacagt
     7201 cacccggagg ggccgccaca cccagtcgtt cacatcttcg gcgtagaccc attccccgtg
     7261 ctcatccagg tcatg
//
LOCUS       DASUDT010000175         4281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1356491, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000175 DASUDT010000000
VERSION     DASUDT010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4281
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356491"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1122
                     /gene="nuoD"
                     /locus_tag="VFV26_03645"
     CDS             <1..1122
                     /gene="nuoD"
                     /locus_tag="VFV26_03645"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEX4845286.1"
                     /translation="THGTLRIILELEGETIAKATPEMGYLHRGVEKLGENLSYQQFIP
                     LTDRLNYCSSIMNNVGYTCAVEKLLGIEIPKRAQQIRVLVSELARVADHIVCVGVNAV
                     DIGAFTAFLYLFKQRETVYDLFEMAAGQRLHTSFTRIGGLFRDLPEGFVPLCERFLVE
                     CEAAVDECERLLTHNPIWHDRTKGIGAISAEDAVNWGYTGPCLRAAGVPQDLRKAQPY
                     LGYETYDFDIPVGTTGDVFDRYLVRMEEMRQSLRIIRQVLDRLEPGPVNVDDPKIALP
                     PKEKVYTRMESLIHHFKLIMHGMEMPVGEVYSATEAANGELGFYIVSDGGKNPYRIRV
                     RPPCLPIFSSFHDQVKGCLVADAVAVLGAMNIIAGELDR"
     gene            1448..2263
                     /locus_tag="VFV26_03650"
     CDS             1448..2263
                     /locus_tag="VFV26_03650"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX4845287.1"
                     /translation="MSGSILNNVSALNASRQLGVTGQGLERAIERLTSGKRINRASDD
                     AAGLAIANRLGADVRVANQGRRNANDGISYLQVADGVTEEITNLLTRAAELAEQAASS
                     TSGAANGTGKTAIDAEYQNIVKTIQDINDKTLYNGGAIFGATLSVAVGDYSVVSLAIG
                     NVDATTLLGAAAGDLLTDTNAVAELGKIRTALDNLSALRGSVGAAQQQLTSMSNALGI
                     QVENFTAAYSQIRDANVADEVIALNKFQVLNQSGVNALSQANQASQAILQLLR"
     gene            complement(2325..2813)
                     /locus_tag="VFV26_03655"
     CDS             complement(2325..2813)
                     /locus_tag="VFV26_03655"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4845288.1"
                     /translation="MHIREELQISKPLEPGHEVALALLLTREYVARLFDQALYEPEDL
                     SDQQFNVLRILKGGGKEGYLVKEIRCRMIYRFADVPRLVNRLEARGLVKRCENPADRR
                     GSRVQITPKGLALEARMHDRHQALCGLVDRSLSPAERDQLLALLERLRNDYRGQLEAL
                     AR"
     gene            2926..3516
                     /locus_tag="VFV26_03660"
     CDS             2926..3516
                     /locus_tag="VFV26_03660"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX4845289.1"
                     /translation="MRHPFRVLLASLALAALPALAQEVYKIDPVHSEVSFKVGHLLAK
                     TSGRFTKFGGTIKVDPADISKSSVEVTIEAASITTDNEARDKHLKSPDFFDVEKFPTI
                     TFKSTSVKEVAKGKLEVTGDFTMHGVTKRLTFPITNAGTQAGMQPGSVVAGFIDGALT
                     LNRNEFGIKTYPGVIGEIVAVSLNVEAGKVSAAAKN"
     gene            3525..3767
                     /locus_tag="VFV26_03665"
     CDS             3525..3767
                     /locus_tag="VFV26_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043231 - intracellular membrane-bounded
                     organelle [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEX4845290.1"
                     /translation="MSEGIPKVAAKEPAVLDLEPGTYWWCSCGLSAKQPFCDGAHKAT
                     SMVPMKVEIAERGTKAFCQCKQTKNAPFCDGAHCAL"
     gene            3899..>4281
                     /locus_tag="VFV26_03670"
     CDS             3899..>4281
                     /locus_tag="VFV26_03670"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEX4845291.1"
                     /translation="MNHPLPPDTANEPLAPGQRLPESERKEFSPEAIAEIQAIMARFP
                     DKLAATLPALHIAQREFGFVSLSAMKAVAQAIGIPESHVFGVATFYTMYQKAPVGKFH
                     FSVCTNISCALRGAAQLLEKVCEKTG"
BASE COUNT          793 a         1479 c         1318 g          691 t
ORIGIN      
        1 acccacggaa cgctgcgcat catcctggaa ctcgaaggcg agaccatcgc caaggccacg
       61 ccggagatgg gctacctcca ccgcggtgtg gagaagctgg gcgagaacct cagctaccag
      121 cagttcatcc ccctcacgga ccgcctgaac tactgcagct ccatcatgaa caacgtgggc
      181 tacacctgcg ccgtggagaa gctgctgggc atcgagatcc ccaagcgcgc gcagcagatc
      241 cgcgtgctgg tctccgagct ggcccgcgtg gcggaccaca tcgtgtgcgt gggcgtgaac
      301 gccgtggaca tcggcgcctt caccgccttc ctctacctct tcaagcagcg cgagacggtc
      361 tacgacctct tcgagatggc cgcgggccag cgcctgcaca ccagcttcac ccgcatcggc
      421 ggcctcttcc gcgacctccc cgagggcttc gtgcccctct gcgagcgctt cctggtggag
      481 tgcgaggccg cggtggacga gtgcgagcgc ctgctcaccc acaaccccat ctggcatgac
      541 cgcaccaagg gcatcggcgc catcagtgcc gaggatgccg tgaactgggg ctacaccggc
      601 ccctgcctcc gcgccgccgg cgtgccccag gacctccgca aggcccagcc ctacctgggc
      661 tacgagacct acgatttcga catccccgtg ggcaccacgg gcgatgtgtt cgaccgctac
      721 ctggtccgca tggaggagat gcgccagagc ctgcgcatca tccgccaggt gctggaccgc
      781 ctcgagcccg gtcccgtcaa cgtggacgat cccaagatcg ccctgccgcc caaggagaag
      841 gtctataccc ggatggaaag cctcatccac cacttcaagc tcatcatgca cggcatggag
      901 atgcccgtgg gcgaggtcta cagcgccact gaggccgcca acggcgaact gggcttctac
      961 atcgtcagcg atggcggcaa gaacccctac cgcatccggg tccgtccccc ctgccttccc
     1021 atcttcagca gcttccacga ccaggtgaag ggctgcctcg tggccgatgc cgtcgccgtc
     1081 ctcggcgcca tgaatatcat cgcgggtgag ctggaccgct aggatccacc cctgagccac
     1141 cgaaggcccc ccatggggcc ttcttctatt gatgcggcaa tttcagcacg ggatgggtcc
     1201 ccggggtggt gccgggaccg gctgtggggc ggggcatttt tgggccaaat gtgccctatc
     1261 cgcttcggag tgagggtgat cgttttttta actatttatt aaataatggt ttaaatttcg
     1321 atttcaatcc ctggcacgct cgctgcgctt ctcgggtccc ccccaggtgg cgggacacgg
     1381 aggttcacat gcgaatgcag ggacgcacgc gccgcgaccg gcgctcccac tcggaaagga
     1441 gcgcgtcatg agcggttcca tcctcaacaa cgtatctgcc ttgaatgcca gccgtcagct
     1501 gggggtcacg ggccagggcc tcgaaagggc catcgaacgc ctcaccagcg gcaagcgcat
     1561 caaccgggct tcggacgacg cggcgggtct cgccatcgcc aaccggctgg gcgcggatgt
     1621 ccgtgtggcc aaccagggcc gccggaacgc caacgacggc atctcgtacc tgcaggtggc
     1681 cgacggcgtc accgaggaga tcaccaacct gctgacccgc gccgccgaac tggcggagca
     1741 ggccgccagc agcacctcgg gcgcggccaa cggcaccggc aagacggcca tcgacgcgga
     1801 gtaccagaac atcgtcaaga ccatccagga catcaacgac aagaccctct acaacggcgg
     1861 ggcgattttc ggcgccaccc tcagcgtggc cgtgggcgac tactccgtcg tgagcctggc
     1921 catcggcaac gtggatgcca cgacgctgct cggggccgcc gcgggcgatc tcctgaccga
     1981 taccaatgct gttgcagaac tgggcaagat ccggacggcg ctcgacaacc tgtcggccct
     2041 gcggggaagc gtgggcgccg cccagcagca gctcacctcc atgtccaacg ccctgggcat
     2101 ccaggtggag aacttcacgg cggcctacag ccagatccgc gacgccaatg tggcggacga
     2161 ggtgatcgcc ctcaacaagt tccaggtgct gaaccagtcc ggggtcaacg ccctcagcca
     2221 ggccaaccag gccagccagg cgatcctcca gctcctccgc taagccattc cggcttttcc
     2281 aaccgccgcc tcgaggcccg gcctgcgccg ggcctttggc tgtactacct ggccagggcc
     2341 tccagctggc cccggtagtc gttccgcagg cgttcgagca gggccaggag ctggtcgcgc
     2401 tcggcggggg agaggctgcg gtccaccagg ccgcagaggg cctggtgccg gtcatgcatg
     2461 cgggcctcca gggcaaggcc cttgggggtg atctgcaccc ggctgccccg gcggtcggcg
     2521 gggttctcac agcgcttcac caggccccgg gcctccaggc ggttcacgag ccggggcacg
     2581 tcggcgaagc ggtagatcat gcggcagcgg atctccttca ccaggtagcc ttccttgccg
     2641 ccccccttga ggatgcggag cacgttgaac tgctggtccg agagatcctc cggctcgtag
     2701 agggcctggt cgaagagtcg ggccacatac tcccgcgtga ggagcagggc cagggccacc
     2761 tcgtggccgg gctcgagggg tttgctgatc tggagttctt cgcggatgtg catgggcctg
     2821 ctcctgcaaa accagattga catgttttcg aaaaaaggtg ttgcaacgcc ttaaaaaggg
     2881 cctagactgg attgcatggt gaaacaccta ttttatggag accccatgcg ccaccccttc
     2941 cgcgtccttc tcgcctccct cgccctggcg gccctgcccg ccctggccca ggaggtctac
     3001 aagatcgacc ccgtccacag tgaagtgagc ttcaaggtcg gccatcttct ggccaagacc
     3061 agcggccggt tcaccaagtt cggcggcacc atcaaggtgg atccggcgga catcagcaag
     3121 tccagcgtcg aggtgaccat cgaggccgcc agcatcacca cggacaacga ggcccgggac
     3181 aagcacctga agtcccccga cttcttcgac gtggagaagt tccccaccat caccttcaag
     3241 agcacctccg tgaaggaagt ggccaagggc aagctggaag tgaccggcga cttcaccatg
     3301 cacggggtga ccaagcgcct gaccttcccc atcaccaacg cgggcaccca ggccggcatg
     3361 cagccgggca gcgtggtggc cggcttcatc gacggcgccc tcaccctcaa ccgcaacgaa
     3421 ttcggcatca agacctatcc gggcgtgatc ggtgagatcg tggcggtcag cctgaatgta
     3481 gaagccggca aggtctctgc cgccgccaag aactgagggc agccatgagc gaaggcatcc
     3541 cgaaagtggc ggccaaggaa cccgcggtgc tggatctgga acctggaacc tactggtggt
     3601 gctcctgcgg cctcagcgcc aagcagccct tctgcgacgg cgcccacaag gccacgtcga
     3661 tggttcccat gaaggtggag attgccgaac ggggcaccaa agccttctgc cagtgcaaac
     3721 agaccaagaa cgcgcccttc tgtgacggag cgcactgcgc cctctgatcc ccaggaagct
     3781 ggcccagaaa gaagacgccg gacccagccc ggtgccttct ttctgggctg ccgcgccttc
     3841 ctcggtcctg ttcggaacgt ggggttcggg taaactggcc cctcatgcga gcgcgcccat
     3901 gaatcatcct ctgccccccg atacagcgaa cgagcccctg gccccgggcc agcggttgcc
     3961 ggaatccgag cggaaggaat tcagccccga ggccatcgcg gagatccagg ccatcatggc
     4021 ccggtttccc gacaagctcg cggccacgct gcccgccctg cacatcgcgc agcgcgagtt
     4081 cggcttcgtg agcctctcgg ccatgaaggc cgtggcccag gccatcggca ttcccgagag
     4141 ccacgtcttc ggcgtggcca cgttctacac gatgtaccag aaggcgccgg tcgggaaatt
     4201 ccacttctcg gtctgcacca acatcagctg cgccctgcgc ggcgccgccc agctgctgga
     4261 aaaggtctgc gagaagaccg g
//
LOCUS       DASUDT010000176         2071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_870491, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000176 DASUDT010000000
VERSION     DASUDT010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870491"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..317)
                     /locus_tag="VFV26_03675"
     CDS             complement(30..317)
                     /locus_tag="VFV26_03675"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX4845292.1"
                     /translation="MSVKVHFLLEDLLVEAPAGTSLQRIADAAGADITFGCRTGSCGT
                     CRVRVAEGLHHCSDPGPEERDFLQGLDAPPDQRLACQVAIHGDVAIDYLGL"
     gene            complement(314..>2071)
                     /locus_tag="VFV26_03680"
     CDS             complement(314..>2071)
                     /locus_tag="VFV26_03680"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF006396.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HEX4845293.1"
                     /translation="FEECNLKAPDLLLAIHGEFLAAGAQVLTSNTWGANRLKLAARGL
                     EGQLDAINREGVALAKQAIAQQGVRAWVAGCIGPLGVRIEPWGPTSFEEARAFFREQA
                     VPLIEAGADLIALEGFEDLNEIHQALLAVRDLGPLPVAALMTTNDEGQALFGAEPDWF
                     IKQLDVWGADLVGLIGGNGPAPHLRLLDRLKAVTAKPIVLQPNPGLPHLVDGRLIYGA
                     SPEYLGGFAARALAAGARAVGGCSGTTPAHIRAMRGAFRQERAFVQAGAGFELKPHEQ
                     PQAEVPFAFRSRFSLKLAQGEFVHTVELVPPRGMEYDKLVAKTRQCRALGVDAINVPD
                     GPRAIARMSALATALIIEQQVGLETILHYACRDRNLLGMQSDLLGAAGLGLRNILAVT
                     GDPPKLGPYPQATAVFDVDAIGLVNMLKRLNTGLDLGGASIGKPTSFSVGVAANPVAP
                     DLEREKTRFRYKVEAGAQWAITQPVFDAESLFRFLDFTESLDGRGGLPIIAGIWPLKS
                     LRNAEFMANEVPGVFVPPSLLTRMAQWTSTEDQVQEGLAIAQEIIEAIRPRIRGLQLS
                     APFGQVELVAPLLPKREAP"
BASE COUNT          296 a          662 c          798 g          315 t
ORIGIN      
        1 tatctgagtt catccgtgtt catctgtggc taaagtccca aatagtcgat ggcgacgtcg
       61 ccgtggatgg ccacttggca ggcgaggcgc tggtcgggcg gggcatccag accctgaagg
      121 aagtcgcgtt cctcgggccc cgggtcgctg caatggtgca gtccctccgc cacgcgcacg
      181 cggcaggtgc cgcaggaacc ggtgcggcag ccgaaggtga tgtccgcccc tgccgcatcg
      241 gcaatgcgct gcaaggatgt gccggcgggc gcttcgacca gcaggtcctc aaggaggaag
      301 tggaccttca cgctcatggg gcctcccgct tgggcagcag cggcgcgacg agttccacct
      361 ggccgaaggg ggcgctgagc tggaggccgc ggatgcgggg gcggatggcc tcgatgatct
      421 cctgggcgat ggcgaggccc tcctggacct ggtcctccgt gctggtccac tgggccatgc
      481 gggtgagcag gctgggcggc acgaagacgc cgggcacttc gttggccatg aactcggcat
      541 tgcgcaggct tttgaggggc cagatgccgg cgatgatggg cagcccgccc ctgccatcca
      601 gggactcggt gaagtccagg aagcggaaga ggctctcggc gtcgaagacg ggttgggtga
      661 tggcccactg ggcgccggcc tccaccttgt agcggaagcg ggtcttctcc cgctccagat
      721 ccggggccac ggggttggcg gccacgccca cgctgaagga ggtgggcttg ccgatgctgg
      781 cgccgcccag atcgaggccg gtgttcaggc gcttgagcat gttcacgagg ccgatggcat
      841 ccacatcgaa gacggcggtg gcctggggat aggggcccag cttcggcggg tcgccggtga
      901 cggccaggat gttgcggagg cccaggcccg cggcgcccag gaggtcgctc tgcatgccca
      961 gcaggttccg gtcgcggcag gcgtagtgca ggatcgtctc gaggcccacc tgctgctcga
     1021 tgatgagggc cgtggccagg gcggacatgc gggcgatggc gcgggggccg tcgggcacgt
     1081 tgatggcgtc cacgcccagg gcccggcact ggcgggtctt ggccacgagc ttgtcgtatt
     1141 ccattcccct ggggggcacc agctccacgg tgtggacgaa ctccccctgg gccagcttga
     1201 ggctgaagcg gctgcggaag gcgaagggga cttcggcctg gggctgttcg tggggcttca
     1261 gctcgaagcc cgccccggcc tggacgaagg cccgctcctg gcggaaggcc ccccgcatgg
     1321 cgcggatgtg ggcgggtgtg gtgccgctgc agccacccac ggcccgggcg ccggcggcca
     1381 gggcgcgtgc cgcgaagccg cccaggtact cggggctggc cccgtagatg aggcggccat
     1441 cgaccaggtg gggaaggccc ggattcggct ggaggacgat gggcttggcg gtgacggcct
     1501 tcagccggtc cagcaggcga aggtgcgggg cggggccgtt cccgccgatg aggcccacga
     1561 ggtccgcgcc ccagacatcc agctgcttga tgaaccagtc gggctcggcg ccgaagaggg
     1621 cctggccctc gtcgttggtg gtcatgaggg cggcgacggg cagggggccg aggtcccgga
     1681 cggcgagaag ggcctggtgg atctcgttca gatcctcgaa accctccagc gcgatcaggt
     1741 ccgcgcccgc ttcgatgagg ggaaccgcct gctcccggaa gaaggcgcgg gcctcctcga
     1801 aggaggtggg cccccagggt tcgatgcgga cgccgagggg gccgatgcag cccgccaccc
     1861 aggcgcggac cccctgctgg gcgatggcct gtttcgcgag ggccacgccc tcccggttga
     1921 tggcgtccag ctggccctcc aggccccggg cggccagctt caggcggttg gcgccccagg
     1981 tgttgctggt gagcacctgg gcccccgccg ccaggaactc gccatggatg gccagcagca
     2041 ggtccggcgc cttgaggttg cactcctcga a
//
LOCUS       DASUDT010000177         2422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1356524, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000177 DASUDT010000000
VERSION     DASUDT010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356524"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VFV26_03685"
     CDS             complement(<1..337)
                     /locus_tag="VFV26_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845294.1"
                     /translation="MNQAALGASLLVLLACSGGGDSKAPSIVTGPSQMPSSTAPVFDP
                     ANAKVPLPNILATATAPNPLTGRAANTPMTPPEALAYVNLKEMGGTNAVAGLNAPIYL
                     QFNAAVDAAT"
     gene            complement(486..1619)
                     /locus_tag="VFV26_03690"
     CDS             complement(486..1619)
                     /locus_tag="VFV26_03690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845295.1"
                     /translation="MTPFRRPTLALALMAASFLMVSTACKREDPQIRELTQKAAEADK
                     ASQQLNQAGTEQQKKLAQAGVNDVKPNAETLLLTDEQKKALEERIKNEKNSSYQALLQ
                     EVLDKDKEIKDLNSKLAKLKADLPKPDVAKLNDSHYGMALRFLKKKGVPDAEAKRLVS
                     RVAIMEKLSPGFEVYHFYANGTYGTWVAQGRAKISPNDLMRQEREKIEGERDEAVAQN
                     EKLQEEVLDLESQKQKITEEITTLQNERVNLIEERTKLQADNAGQLAKLNSLHYVIGT
                     RDALKVEGVIEIPVFAKDRAGKNWRDEVFTQSLDLRSAKTITIKAADLGLKKIGKVSV
                     VPGSYLKDEHYKLTISPDKLSAVVELITVSRFKNDKVVFAVTD"
     gene            1801..>2422
                     /locus_tag="VFV26_03695"
     CDS             1801..>2422
                     /locus_tag="VFV26_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4845296.1"
                     /translation="MAAQGHHLFTSESVTEGHPDKMADQISDAVLDAALKDDPRSRVA
                     CETLLTTGLVLVAGEITTETYIPVAQLVRDVVKDIGYDHHIKGFDHATCAVMVTIDQQ
                     SPDIAMGVDTGGAGDQGLMFGFACRETPELMPAPIHFSHLLTRKLSEVRKSGQLPWLR
                     PDGKSQVTVEFDGDQVKRIHTVVISTQHDEHITQNSIRDAVIQDVIK"
BASE COUNT          393 a          732 c          822 g          475 t
ORIGIN      
        1 cggtggcagc gtccaccgcg gcattgaact ggaggtagat cggcgcattc aggcccgcga
       61 cggcgttggt gccgcccatc tccttcaggt tcacgtaggc cagggcctcg gggggagtca
      121 tgggggtgtt ggctgcccgg cccgtgaggg gattcggagc ggtggccgtg gccaggatgt
      181 tggggagggg caccttcgcg ttcgccgggt cgaagacggg cgccgtggag ctcggcatct
      241 ggctggggcc cgtgacgatg gagggggcct tggaatcgcc gccgccgctg caggcgagaa
      301 gcaccagcag ggaagcccca agggccgctt ggttcaagcg tggaatcatc gcatcacctc
      361 atgggtgggg ttggaaaggg ctggggagag tctgatgacg ataggcggcc cgcggtggaa
      421 atgccacaca aaaacacaaa aggaaaggcc cccgaagggg cccttttttc ctaacctcga
      481 acaagtcagt ccgtgacggc gaagacgacc ttgtcgttct taaagcggct caccgtgatg
      541 agttccacca cagcgctcag tttgtcgggg ctgatggtga gcttgtagtg ctcgtccttg
      601 aggtaggaac cgggcaccac gctgaccttg ccgatcttct tcaggcccag gtcggcggcc
      661 ttgatggtga tggtcttggc ggagcggaga tccaggctct gggtgaagac ttcgtcgcgc
      721 cagttcttgc cggcccggtc cttggcgaac acggggatct cgatgacgcc ctcgactttc
      781 agggcgtcgc gagtgccgat gacgtagtgc agcgagttga gcttggccag ctggccggcg
      841 ttgtcggcct ggagcttggt gcgctcctcg atgaggttga cgcgctcgtt ctggagggtg
      901 gtgatctcct cggtgatctt ctgcttctgg ctttcgaggt cgaggacctc ctcctgcagc
      961 ttctcgttct gggccacggc ctcgtcgcgc tcgccctcga tcttctcgcg ctcctggcgc
     1021 atcaggtcat tgggggagat cttggcgcgg ccctgggcga cccaggtgcc ataggtgcca
     1081 ttggcgtaga agtggtagac ctcgaaaccc ggagagagtt tttccatgat ggccacgcgg
     1141 ctcaccaggc gcttggcctc ggcatcgggc acgcccttct tcttcaggaa acgcagggcc
     1201 atgccgtagt ggctgtcgtt gagcttggcc acatcgggct tcggcagatc ggccttgagc
     1261 ttggcgagct tggagttgag gtccttgatc tccttgtcct tgtccagcac ttcctggagc
     1321 agggcctggt acgagctgtt cttctcattc ttgatgcgct cttcgagcgc cttcttctgc
     1381 tcgtcggtga gcagcagcgt ttcggcgttg ggcttgacgt cgttgacacc ggcctgagcc
     1441 agcttcttct gctgctcggt gccggcctgg ttcaactgct ggctggcctt gtcggcctcg
     1501 gcggccttct gggtcagttc gcggatctgc ggatcctcgc gtttgcaggc ggtggacacc
     1561 atcaggaagg acgcggccat cagagccagg gcgagggtcg ggcgtcggaa gggggtcatg
     1621 ggttcctcca ctgggggggc gtgggccggg cgtttcgagg gtgaagacac cccaccttag
     1681 tcccctaggt tagcgcatgg caaggtttcc cgcgtcatcc gaaaggtgta tggacggggg
     1741 tccccgggat atactcgacg ttccctccag gagcctccgg agggtaccga ggagtcaggc
     1801 atggctgccc aggggcatca ccttttcact tccgaaagcg tcaccgaagg ccatcccgac
     1861 aagatggccg accagatctc ggacgccgtg ctggacgcgg ccctcaagga cgatccccgc
     1921 agccgcgtgg cctgcgagac gctgctgacc acaggcctgg tgctggtggc gggcgagatc
     1981 accaccgaaa cctacatccc cgtggcacag ctggtgcggg atgtggtgaa ggacatcggc
     2041 tacgaccacc acatcaaggg cttcgaccac gccacctgcg ccgtgatggt gaccatcgac
     2101 cagcagagcc ccgacatcgc catgggcgtg gacaccggcg gcgccggcga tcagggcctc
     2161 atgttcggct tcgcctgccg ggagaccccc gagttgatgc cggcgcccat ccacttcagc
     2221 cacctgctga cgcggaagct ctccgaggtc cgcaagagcg gccagctgcc ctggctgcgg
     2281 cccgatggca agtcgcaggt caccgtggag ttcgacgggg accaggtcaa gcgcatccac
     2341 accgtggtga tctccaccca gcacgacgag cacatcaccc agaacagcat ccgcgacgcc
     2401 gtgatccagg acgtcatcaa gg
//
LOCUS       DASUDT010000178        10651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1047413, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000178 DASUDT010000000
VERSION     DASUDT010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 10651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10651
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1047413"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VFV26_03700"
     CDS             <1..405
                     /locus_tag="VFV26_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845297.1"
                     /translation="VFFGADVSSRCFSAGDAGSMPMFDHCARFTNYFSGYDGALQVSN
                     FKNVDPASRVGRIGLPLDSPPKTLDVDCSARYAKVPGRTFKTISGMPSHSWYLEDEKW
                     YEDLAYTLRGDLDRYVIPTRRKLGDNDFELIP"
     gene            complement(689..1228)
                     /locus_tag="VFV26_03705"
     CDS             complement(689..1228)
                     /locus_tag="VFV26_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845298.1"
                     /translation="MSVGSPLVFRPSFAQRAMAVLLFAGSWLVGVRALAQILERLPVL
                     RASLKVAAAASEPTWSYWVAIAAAIGAVVAGGLLLIGTLLGLLLVEGSQVLVDELGLS
                     VEHNALPAPLARHLGAGRLLWKRISRVERSGPFFVLRGGGDPGQSGPKDPTLRFLMVD
                     ELERLVLMVLERSPNLKHE"
     gene            complement(1228..1953)
                     /gene="pyrF"
                     /locus_tag="VFV26_03710"
     CDS             complement(1228..1953)
                     /gene="pyrF"
                     /locus_tag="VFV26_03710"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX4845299.1"
                     /translation="MSPAPSILTPRERLVVALDLPTAREALAMAERLSGRVGMLKVGL
                     ELFCAEGPAFVKELQARVPVFLDLKLHDIPTTVRRALESLLKLDPRLINVHAQGGPAM
                     LEAAVEAVRAHRAAGGRTELLAVTVLTSLDREALAALGHAGRPEDLALAYARLAHQAG
                     CAGVVCSAWEAAAIREACGEGFHRLTPGIRPAGAATQDQARVMTPAQALKQGSTWLVV
                     GRPITHAADPAAAAEAIVAEMQS"
     gene            2003..2962
                     /locus_tag="VFV26_03715"
     CDS             2003..2962
                     /locus_tag="VFV26_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845300.1"
                     /translation="MLPLTALPPTPPAEVRPAPPSPAELQNRLLEAYDWGLPLPAPPR
                     GSGTPAFRWLRAAATSDPQRGPANPFPPGPAHREAEALRALFKAPENRLAGRLAALPL
                     QQPGTALALWRWGKARMREGRFTPDVRRTWEDRLLAEGPALTRGYALRHALCWALADQ
                     DEARFASLKARADATADPVLAQFQRLFGLLGGPSPVLRLWTLPALDYQDVRLDQLGAA
                     RLWVLPAEEGPLPELPPEVAWIIPSLHAGLDDRSASLPEGLMEEARALASRLQAEGRT
                     ARYVPDRAAFESLGLAWFPILIELDGQGNLKAIRMGDAAPEKP"
     gene            complement(2959..4905)
                     /locus_tag="VFV26_03720"
     CDS             complement(2959..4905)
                     /locus_tag="VFV26_03720"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX4845301.1"
                     /translation="MVRRMVAALVLLAAAGLAAGPRTWTTEKWFEKPKSPRIANYRIE
                     ATLDFEHKTLEGTETLSWRNTGTAPTQELPLHLYLNAFKGPQSLFVKESGGRLRHDRL
                     DRPSEASSWGYCRLISARMEGKDLQGHTGEDETVHWLRLPRPVPPGDTIQIEIAWENR
                     YPKVFARSGWSEDFLMSGQWFPKVGVYQGDRWNCHAYHANTEFFADFGVYDVALSLPN
                     ALGLAHTGTQTNFVTEIEQDPKRPLNVIWRLHAEDVHDFAWAVMPRESWRKPAMIEYR
                     GVQVFYYIDDRTRGNFQRQRRAVENALRWSEEWFFKYPYPTLTVIDTPKGARGADGME
                     YPTLITAGSVAFDPLQQRFEPELVTIHEYGHQFFQGMLASNETEEPWLDEGFTSWFTH
                     KAMERSYHSLLGGRRFQVPTDFPDWGGYWTLPSADPLTRFGFRTMSLQSYFVTSYGKS
                     TLVLNQLEAMLGRPVMEEVMRTYAQEMAFRHPTRHDFRRIAERVSGRDLSAFWRDFVE
                     GTEVLDYTIRGVKVRDVTQGGWLFSDKPPVFAAPQPAAPGRVGSITLERKGGLRVPIT
                     LWVRLENREEQRLVWDGQDRWITYEFDSPVAAAVLDPDGNYPMLKDRLHASYTPKPVK
                     RGFYYWSQVVWGAVAGWLQGCGIG"
     gene            4998..5074
                     /locus_tag="VFV26_03725"
     tRNA            4998..5074
                     /locus_tag="VFV26_03725"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5032..5034,aa:Met,seq:cat)
     gene            5700..6254
                     /locus_tag="VFV26_03730"
     CDS             5700..6254
                     /locus_tag="VFV26_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845302.1"
                     /translation="MAPPSPAAKGPEPPRISPGSPADQAALAQVARKDKDWGVRKAAV
                     ERLTDQAVLAEVASADEDVDIRRLAAGRLTLQGALAKVATSDKDWSVRKAAAARVADQ
                     GVLARIATTDKDADIRKLAVGLLTDQAAIARVARNDQDWSVRLSAVERLTDKAALAQV
                     ALHDPDPAIRRLAVGKLADLPAAP"
     gene            6278..7150
                     /locus_tag="VFV26_03735"
     CDS             6278..7150
                     /locus_tag="VFV26_03735"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX4845303.1"
                     /translation="MRYDEPLFRPPSEADSFILQATLGCSWNACTYCAMYRGKRYQVR
                     PLDQILADIAEAGARFADEVRHVFVADGDPLGMDLGHWEPILAALAEAFPRLRRVSTY
                     ATARNLLEKTPEALKRLREGGLSLLYIGPESGDDVTLKRIAKGATAADHVEAARKARE
                     AGMEQSLIFLLGAGGCERSEAHARASGRLASAMDPRFLSTLTLTVVPGTPLARLEDQA
                     RFELPDIRGLLTELRWFVEEAHLSGAIFRSNHASNYLPIGGRLPRDREAILAAIDAAL
                     AGRTPLRPEWARGL"
     gene            7278..7859
                     /locus_tag="VFV26_03740"
     CDS             7278..7859
                     /locus_tag="VFV26_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845304.1"
                     /translation="MSHARGLLFGILLALASAVAALAETPLWLRTPAVSPDGTAIAFS
                     YQGRLYRVPATGGLAAPLTLGEAHDFMPVWSRDGKWIAFASDRTGNFDVYVMPSEGGA
                     ARRLTFHSANDLPSDFTPDGKEVLFTSRRQDTAENAQFPYRPFPQTYAVPVAGGAARR
                     VSPMPLETGVYDAKGGRILFQDVKGIENAWRKH"
     gene            7869..10547
                     /locus_tag="VFV26_03745"
     CDS             7869..10547
                     /locus_tag="VFV26_03745"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX4845305.1"
                     /translation="MARDISLYDAATKTYRALTTNPGEDRNPVFGADDDTFYFLSERD
                     GKVFNVYRSGIKDPARAVALTRFERHPVRFLTASREGTLCYAWDGELYTQREGGEPRK
                     VAIRVQTDLARAQERILPVNGGMTEFVPSPNGKEVAFVFRGEVFVASLEGGHTRRITN
                     TAGQERSVGFSPDGRTLVYAAERNGSWDLVTTRLTRPEEKVFYAATVLEEKVILGTPA
                     DEFQPLFSPDGKEVAYLEERTALKVLNLASGKARTLLPAGRNYSYSDGDQDFTWSPDG
                     RWIALAFNTGMGWVRDVGLLAADGSGRLVNLSRSGHFDGNPRFSPDGSMLYWTTDRQG
                     LRNTSQQSATYDVYAAFLTQEAWDRFHMNKEEFALLKEQEDKAKDGDKDKTKGDKENG
                     KEKDQAAPKELRIDWEGLEDRTARLTAQASELGDALISKTGDRLFYLSRFDKGFDLWS
                     LDLRTRELKLLTKLEVRPGQGGVGLERSSDGKALLVLADGRIAKVDPESGKRDAVAVN
                     GEMVHRPAEERAYIYEHAWRQAGKKFYVENLHGTDWPFYVAAYRRFLPHVADNHDFAE
                     LLSELLGELNASHTGGRYAPPQGQGDVTASLGLFLEAPAGGTGLRVTEVLKKGPVDQA
                     GRRVKPGHLLLAIDGIPVGAAEDPAILLNRKAGKPTLLAFQDPKDGARWEQSVKPINA
                     GQENELLYTRWVERCREMVDRLSGGRLGYVHVRGMNDGSMRTVIDEVLGRYGTREALV
                     VDTRFNGGGNLHEQLSDFLSGRKYFDVVPRGQAYGHQPLMKWNKPSIVVMGEANYSDA
                     HLFPVAYKLKNLGKTVGMPVPGTGTFVWWETQIDPTLVFGIPQGGWITPDGKYCENTQ
                     LEPDLRVPNTWEALSAGRDEQLEAAVKSLLADLKTR"
BASE COUNT         1764 a         3852 c         3504 g         1531 t
ORIGIN      
        1 gtgttcttcg gcgcggatgt ctcctcccgc tgcttcagcg ccggggatgc gggctcgatg
       61 cccatgttcg accactgcgc ccgcttcacc aactacttca gcggctacga cggggcgctc
      121 caggtgtcca atttcaagaa cgtggatccc gcctcccgcg tgggccggat cgggctcccc
      181 ctggactccc cgcccaagac gctggatgtg gattgcagcg cccgctatgc caaggtcccg
      241 ggccggacct tcaagaccat ctcgggcatg ccctcccact cctggtacct cgaggacgag
      301 aaatggtacg aggatctcgc ctacaccctg cggggcgatc tcgaccgcta cgtcatcccc
      361 acccgccgga agctggggga caacgacttc gaactcatcc cgtagaaagc agcggacccg
      421 cggaggagcg ccccgcgggt ccgttatgtc ataccaagcc gccaccaatg atagagattc
      481 accacggagt cacggaagcc acggtggagg cacagaggcc tccgtgttcc tccgccatgg
      541 gcaggccgaa ggccgcttcc ggccacgccg gaagccacgg gaggcgccgg gcccggatcc
      601 ttttgaggcg atccggatcc ggcgcctcct gtgtgcccat gctctggttc tccgtggtgg
      661 atcctcaacg attgaacgcg aaaccgtatc actcatgctt caggttgggg ctgcgctcca
      721 gcaccatgag caccagccgt tccagctcgt ccaccatgag gaagcggagc gtcggatcct
      781 tcggaccgct ctgccctgga tcgccacctc cgcggaggac gaagaaggga ccggagcgct
      841 cgacccggga gatgcgcttc cagagcaggc gcccggcgcc caggtggcgg gccagggggg
      901 ccggcagggc gttgtgctcc acggacaggc ccagttcatc caccagcacc tgggagccct
      961 ccaccagcag caggcccagc agggtgccga tgaggagcag gccccccgcc accacggcgc
     1021 cgatggcggc cgcgatggcc acccagtagg accaggtggg ctcgctggcg gccgccgcca
     1081 ccttcagcga ggcccgcagc acgggcagcc gctccaggat ctgggccagg gcgcggaccc
     1141 ccaccagcca ggagcctgca aagagcagga cggccatggc gcgctgggcg aaggagggcc
     1201 ggaatacgag cggagatccc acagacatca gctttgcatc tccgccacga tggcctcggc
     1261 tgccgcggcg ggatccgccg catgggtgat gggccgtccc accacgagcc atgtcgagcc
     1321 ctgcttcagg gcctgggccg gggtcatcac ccgcgcctgg tcctgggtgg cggcgcccgc
     1381 gggccggatg cccggcgtca ggcggtggaa gccctcgcca caggcctcgc ggatggccgc
     1441 ggcctcccag gccgagcaca ccacgcccgc gcagcccgcc tggtgggcca acctggcgta
     1501 ggccagggcc agatcctcgg gccgtcccgc atggcccagg gccgccaggg cctcccggtc
     1561 caggctggtg agcacggtga ccgccagcag ctcggtccgg ccgcccgcgg cgcgatgggc
     1621 gcgcaccgcc tccaccgccg cctccagcat ggcggggccg ccctgggcgt ggacgttgat
     1681 gaggcgcgga tccagcttca gcagggattc cagggcccgg cgcacggtgg tgggaatgtc
     1741 gtggagcttc agatccagga acacgggcac ccgggcctgg agttccttca cgaaggcggg
     1801 cccctcggcg cagaacagct ccaaccccac cttgagcatg cccacccggc cggagagccg
     1861 ttccgccatg gccagggcct cccgggccgt gggcaggtcc agggccacca cgaggcgctc
     1921 ccggggcgtg aggattgaag gggctgggct caaggcgact cccgtatgat gcggaggatc
     1981 attctgccac caaggaagct ccatgctccc actgaccgca ctgccgccca cccccccagc
     2041 cgaagtgcgc cccgcaccgc cctcgcccgc cgagttgcag aaccggctgc tggaggccta
     2101 cgactggggc ctccccctgc cggcccctcc caggggatcc ggcaccccgg ctttccgctg
     2161 gctgcgggcc gccgccacct ccgatcccca gcgggggccg gcgaacccct tcccgcccgg
     2221 ccccgcccac cgggaagcgg aagccctgcg ggccctcttc aaggcgcccg agaaccgcct
     2281 ggccggacgc ctcgccgctc tgcccctcca gcagcccggc accgccctgg ccctatggcg
     2341 gtggggaaag gcccggatgc gggaagggcg cttcaccccc gatgtccgcc ggacctggga
     2401 agaccgcctg ctcgcggaag gcccggccct cacccgcggc tacgccctcc gccatgccct
     2461 gtgctgggcc ctggcggacc aggatgaggc gcggttcgct tcgctcaagg cccgcgccga
     2521 tgcgacggcg gatcccgtcc tggcccagtt ccagcggctc ttcggcctgc tcggcggccc
     2581 ctcgccggtc ctgcgcctct ggaccctgcc ggctctggac taccaggatg tccgtctcga
     2641 tcagctcggt gcggcccggt tgtgggtcct ccccgccgaa gaggggcccc tgccggaact
     2701 cccgccagag gtggcctgga tcatccccag cctccacgcg ggactggacg accgcagcgc
     2761 gagcctgccc gaaggcttga tggaggaggc ccgcgccctg gccagccggc ttcaggccga
     2821 aggccgcacc gcccgctatg tcccggaccg ggcggccttc gaaagcctgg gcctagcctg
     2881 gttccccatc ctcatcgaac tggatggcca ggggaacctc aaggccatcc gcatgggaga
     2941 cgcggcgccg gagaaaccct agcctatccc gcacccctgc agccagcccg ccacggcgcc
     3001 ccagaccacc tgggaccagt agtagaagcc ccgcttcacc ggcttcggcg tgtagctggc
     3061 gtggaggcgg tccttgagca tggggtagtt gccgtcggga tcgagcacgg cagcggccac
     3121 aggggaatcg aactcgtagg tgatccagcg gtcctggcca tcccacacga gccgctgctc
     3181 ctcgcggttc tccagccgca cccagagcgt gatgggcacc ctgaggccac ccttccgctc
     3241 gagggtgatg gagcccacgc ggcccggcgc cgcgggttgc ggggccgcga agaccggggg
     3301 cttgtccgaa aagagccacc cgccctgcgt gacatcgcgg accttcacac cccggatggt
     3361 gtagtcgagc acctcggtac cttcgacaaa atcccgccag aaggccgaaa gatcgcggcc
     3421 cgagacccgc tcggcgatgc gcctgaagtc atggcgcgtc gggtgccgga aggccatctc
     3481 ctgggcgtag gttcgcatca cctcctccat cacgggccgg cccagcatgg cttctagctg
     3541 gttcaacacc agcgtggatt tgccgtagct ggtgacgaag tagctctgga ggctcatggt
     3601 cctgaacccg aagcgcgtga ggggatcggc ggaaggcagc gtccagtagc ccccccagtc
     3661 cgggaaatcc gtgggcacct ggaatcgccg cccccccagc aggctgtggt agctgcgctc
     3721 catggccttg tgggtgaacc agctggtgaa gccctcgtcc agccagggtt cctcggtctc
     3781 gttgctggcc agcatgcctt ggaagaactg gtggccgtat tcatggatcg tcaccagctc
     3841 gggctcgaag cgctgctgca gcggatcgaa ggccaccgaa ccggcggtga tcagcgtcgg
     3901 gtattccatg ccgtcggcgc cccgggcccc cttcggcgtg tcgatgaccg tgagcgtcgg
     3961 gtacggatac ttgaagaacc actcctcgct ccagcggagg gcgttctcca cggcgcggcg
     4021 ctggcgctgg aagttcccgc gggtgcggtc atcgatgtag tagaagacct gcacgccgcg
     4081 gtattcgatc atggcgggct tgcgccagct ctcccggggc atcaccgccc aggcgaaatc
     4141 gtggacatcc tccgcatgaa ggcgccagat cacgttcagg ggacgcttgg gatcctgctc
     4201 gatctccgtc acgaagttgg tctgggtccc cgtgtgcgcc agcccaagcg cgttcggcag
     4261 ggacagggcc acatcgtaga caccgaaatc cgcgaagaac tccgtgttcg cgtgataggc
     4321 atggcagttc cagcggtcgc cctggtagac gccaaccttc gggaaccact ggcccgacat
     4381 caggaagtcc tccgaccagc cgctgcgcgc gaacaccttc gggtagcggt tctcccacgc
     4441 gatctcgatc tggatggtgt cccccggggg aacgggccgc ggcagcctca accagtggac
     4501 cgtctcatcc tccccggtgt gcccctggag atccttccct tccatccggg cgctgatgag
     4561 gcggcagtag ccccaggagg aggcctccga tggccggtcc agccggtcat ggcgcaggcg
     4621 tccgccgctt tccttcacga agaggctctg gggccccttg aaggcattga gatacaggtg
     4681 cagcggcagc tcctgcgtgg gggccgtgcc cgtgttccgc caggagaggg tctccgtccc
     4741 ctccagcgtc ttgtgctcga aatccagggt cgcctcgatg cggtagttgg cgatccgcgg
     4801 agacttcggc ttctcgaacc acttctccgt cgtccaggtc cggggccccg ccgccagccc
     4861 ggcggccgcc aacagcacca gcgcagccac catgcggcgt accatcggat cctcccagag
     4921 cgtccgtcga gcataccaac actcatccag cctgcgtcct tgccacttcc ccaaaccctg
     4981 ctacactcga gatctaccgc ggggtggagc agtccggtag ctcgttgggc tcataaccca
     5041 aaggtcgcag gttcaaatcc tgcccccgct accaaccgaa acgacgaccg gagccgagtg
     5101 ctccggtttt cgcgtacacc catcacggaa ggcaggattt ggacctgcga gtgggatcgc
     5161 ggaggccctc cgggggaggg ccgggagcga gaccggggac cgcgcagcgg gaccagttca
     5221 aatcgtggcc gcatgggtcg gcgcgaaagg cggggaccgg caggatccgg acccgcgaat
     5281 ggcggcgctt caacctgatg ggccgggtgt gctatattgt cgaaaacgta aacacatcca
     5341 ttaaaataat tacacgtagc ccatccacgc atttggattc gaaagaccac cccatggcat
     5401 ttcgggcgaa caacatccgg cacagggtcg tgtggtggtt cacggccacg ctcgtctttg
     5461 gtgtcgcggg gatggcctgc aggaatcccc gcgcagaaag ccccaggcct ccggatcgga
     5521 tcaccccgcc cccggtcgac cccgcggccg ggaatcccga tgggaagcct gccccggccc
     5581 agcgcccccc tgccaccaac atggatgcgc ccagggctgc ggtggaagcc gtggcagctc
     5641 cggctcccaa aacggatcag ggcccggtgg aacccgcccc tgccgtgggt gcgggagcag
     5701 tggctccgcc atccccggcg gccaagggcc cggagccgcc ccggatcagc ccagggagtc
     5761 ccgccgacca ggccgccctg gcccaggtgg cccggaagga caaggactgg ggcgtgcgga
     5821 aggccgctgt ggagcggctg acggaccagg ctgtgctcgc cgaggttgct tcggcggatg
     5881 aggatgtgga catccgcagg cttgcggcgg gccggttgac gcttcagggc gccctggcca
     5941 aggtcgccac cagtgacaag gactggagcg tgcggaaggc cgcggcggca agggtcgccg
     6001 atcaaggcgt cctggccagg atcgccacaa cggacaagga cgcggatatc cgcaagctcg
     6061 ccgtgggcct gttgacggat caggcggcca tcgcccgggt ggccaggaac gaccaggact
     6121 ggagcgtgcg cctgtccgca gtggaaaggc tgaccgacaa ggcggccctg gcccaggtcg
     6181 ccctgcacga tcccgatccg gccatccgcc ggctcgccgt gggcaagctg gcggatctgc
     6241 ccgcggcgcc gtagcggaga tgggggagaa tacccccgtg cgctacgacg aacccctctt
     6301 ccgcccgccc agcgaggccg attccttcat cctccaggcc accctgggct gctcctggaa
     6361 tgcctgcacg tactgtgcga tgtaccgggg caagcgctac caggtgaggc ccctcgatca
     6421 gatcctggcg gacattgccg aggccggggc ccggttcgca gacgaggtgc gccatgtctt
     6481 cgtggccgat ggcgatccgc tgggcatgga cctcgggcac tgggaaccca tcctggccgc
     6541 cctggcggaa gccttccccc gcctgcgccg ggtgagcacc tacgccaccg cccgcaacct
     6601 gctggagaag acgccggagg cattgaagcg cctccgggaa gggggcctct ccctgctcta
     6661 catcggcccg gaatccggcg atgacgtgac gctgaagcgc atcgcgaagg gggccaccgc
     6721 ggcggatcac gtcgaagcgg cgaggaaggc ccgcgaggcg gggatggagc agtccctgat
     6781 cttcctgctc ggagccggcg gctgcgagcg cagcgaagcc cacgcccgcg cctccggccg
     6841 cctggcctcg gccatggacc cgcgcttcct gtccaccctc accctcacgg tcgttcccgg
     6901 cacacccctg gcccggctgg aggaccaggc gcgcttcgaa ctcccggaca tccggggcct
     6961 gctcaccgag ctgaggtggt tcgtggaaga ggcgcacctc agcggggcca tcttccggtc
     7021 caaccacgcc tccaactacc tgcccatcgg gggccgactc ccgcgggacc gggaggccat
     7081 cctcgccgcc atcgacgcgg ccctcgccgg ccggaccccg ctgcggcccg agtgggcccg
     7141 gggcctgtag gccgccggaa atcttggaag accccagatc cggaatccgg aggttccccg
     7201 ccgggcgggc agggctaacc tggatccggt ttgccgctgt atccgaagat tcgactctca
     7261 gctcgaagga ggttcccttg tcccacgccc gcggactgct gttcggaatc ctgttggccc
     7321 tcgcctcggc ggtggcggcc ttggcggaaa ccccgctctg gctgcgcacg ccggcggtct
     7381 ccccggacgg gaccgccatc gccttcagct accaggggcg gctctaccgc gtgcccgcga
     7441 ccgggggcct cgccgcgccc ctcaccctgg gggaagccca cgatttcatg ccggtctggt
     7501 ccagggacgg gaaatggatc gccttcgcct cggaccgcac cgggaacttc gatgtgtacg
     7561 tgatgccctc ggagggtgga gcggcccgcc gcctgacctt ccactccgcc aatgaccttc
     7621 ccagtgattt cacgccggac gggaaggaag tgctgttcac ctcgcggcgc caggacaccg
     7681 cggagaacgc ccagttcccc taccgcccct tcccccagac ctacgccgtc cccgtggcgg
     7741 gcggcgccgc ccgccgggtg agccccatgc ccctggagac gggcgtctac gatgccaagg
     7801 gcggccgcat cctcttccag gacgtcaagg ggatcgagaa tgcctggcgc aagcactaga
     7861 cctccgccgt ggcccgggac atcagcctct acgatgccgc cacgaagacc taccgcgccc
     7921 tgaccacgaa tcccggcgag gaccgcaatc cggtcttcgg tgcggatgac gacaccttct
     7981 acttcctcag cgagcgcgat ggcaaggtct tcaacgtcta ccgcagcggc atcaaggatc
     8041 ccgccagggc cgtggccctc acgcgcttcg agcggcatcc cgtgcggttc ctcaccgcct
     8101 cccgcgaagg cacgctctgc tacgcctggg acggcgagct ctacactcag cgggagggcg
     8161 gcgagccgcg caaggtggcc atccgcgtcc agacggatct ggcccgcgcc caggagcgca
     8221 tcctgcccgt gaacggcggc atgacggaat tcgtgccctc gcccaacggg aaggaagtgg
     8281 ccttcgtctt ccggggcgag gtcttcgtgg ccagcctgga gggcggccac acccgccgca
     8341 tcaccaatac cgcaggccag gagcggagcg tgggcttcag ccccgacggc cgcaccctcg
     8401 tctacgccgc ggagcgcaac ggcagctggg acctcgtcac cacccgcctc acccgccccg
     8461 aggagaaggt cttctacgcg gccaccgtgc tcgaagagaa agtcatcctc ggcacgcccg
     8521 ccgacgagtt ccagcccctc ttcagccccg acggcaagga ggtggcctac ctggaggagc
     8581 ggaccgccct caaggtgctg aacctcgcca gcggcaaggc ccgcaccctg ctgcccgcag
     8641 ggcgcaacta ctcctacagc gacggggacc aggatttcac ctggtcgccc gatggccgct
     8701 ggatcgccct cgccttcaac accggcatgg gctgggtgcg cgatgtgggc ctcctcgcgg
     8761 cggacggcag cggcaggctc gtgaacctca gccgtagcgg ccacttcgac ggcaacccac
     8821 ggttcagccc agacggctcg atgctctact ggaccacgga ccggcagggc ctgcgcaaca
     8881 ccagccaaca gtccgccacc tacgacgtct acgccgcctt cctcacgcag gaggcctggg
     8941 accgcttcca catgaacaag gaggagttcg ccctcctcaa ggagcaggag gacaaggcca
     9001 aggacggcga caaggacaag accaagggcg acaaggagaa cggcaaggag aaggaccagg
     9061 ccgcccccaa ggagctgcgc atcgactggg aggggcttga ggaccgcacc gcgcgcctca
     9121 cggcccaggc ctcggagctg ggcgacgccc tgatctccaa gactggggac cggctcttct
     9181 acctctcccg cttcgacaag ggcttcgacc tctggagcct ggacctgcgc acccgggagc
     9241 tgaagctcct caccaagctc gaggtccggc ccggccaagg cggcgtgggc ctggagcgca
     9301 gctccgacgg caaggcgctg ctggtgcttg ccgacgggcg catcgccaag gtggacccgg
     9361 agtccggcaa gcgcgacgcc gtggccgtga acggcgagat ggtgcaccgc cccgccgagg
     9421 agcgcgccta catctatgag cacgcctggc gccaggccgg gaagaagttc tatgtggaga
     9481 acctgcacgg cacggactgg cccttctacg tggccgccta ccgccgcttc ctgccccacg
     9541 tcgccgacaa ccatgacttc gccgaactcc tcagcgagct cctgggcgag ctgaacgcct
     9601 cccacaccgg cggccgctac gccccgcccc agggccaggg cgacgtcacc gcctccctgg
     9661 gcctcttcct ggaagccccg gcgggcggca ccggcctccg ggtcacggag gtgctgaaga
     9721 agggtcccgt ggatcaggcg ggccgccgcg tgaagcccgg ccacctcctc ctggccatcg
     9781 acggcattcc cgtcggcgcg gcggaggatc ccgccatcct cctcaaccgc aaggccggca
     9841 agcccaccct gctggccttc caggacccca aggacggcgc ccgctgggag cagtccgtga
     9901 agcccatcaa cgcgggacag gagaacgagc tgctctacac ccgctgggtg gagcgctgcc
     9961 gggagatggt ggaccgcctc tccggcggcc gcctgggcta cgtgcacgtg cgcggcatga
    10021 acgacgggag catgcgcacg gtcatcgacg aggtgctggg ccgctacggg acgagggaag
    10081 ccctggtggt ggacacgcgc ttcaacggcg gcggcaacct ccacgagcag ctctccgact
    10141 tcctctccgg caggaagtac ttcgacgtgg tgccccgggg ccaggcctac ggccatcagc
    10201 ccctgatgaa gtggaacaag ccctccatcg tggtgatggg ggaggcgaac tactcggacg
    10261 cccacctctt ccccgtggcc tacaagctga agaacctcgg caagaccgtg ggcatgcccg
    10321 ttcccggcac cggcaccttc gtctggtggg aaacccagat cgatccgacg ctcgtcttcg
    10381 gcatccccca gggcggctgg atcaccccgg acgggaagta ctgcgagaac acccagctgg
    10441 agcccgacct ccgcgtgccc aacacctggg aggccctgtc cgccggccgg gacgaacagc
    10501 tcgaagccgc ggtcaagagc ctgctggcgg acctgaagac ccgctgaatc ccgcctgata
    10561 cggtttcgcg ttcaatcgtt aaggatccac cacggagaac cagagcatgg gcacacggga
    10621 ggcgccggat ccggatcgcc tcaaaaggat c
//
LOCUS       DASUDT010000179         2146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1753957, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000179 DASUDT010000000
VERSION     DASUDT010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753957"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VFV26_03750"
     CDS             complement(<1..1011)
                     /locus_tag="VFV26_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4845306.1"
                     /translation="MATPLRVLVVDDDPGMRDGMAMSLKRSGFFAEQARGGEEALRMI
                     RPGAYDAVVTDLRMPGMDGLQLTARLKAVDPALPVLLITAFGSLETAREAMRLGAFDF
                     LSKPFSPEELSSALNKALKSEGHLKAEEPAEAPVILTQDPALGETLALARRAADSRAT
                     ILIQAESGTGKELLAKLIHGSSPRRSGPFVAINCAAIPENLLESELFGYEKGAFTGAT
                     GMKQGRFEQADGGTLVLDEVGELPLGLQGKLLRVLQERTVDRLGGNRPIPVDVRLIAL
                     TNRDLQAEVKAGRFREDLYYRLNVVPVHVPPLRERKEDIGDLAAFLLEKSCVENDLPP
                     KEW"
     gene            complement(1050..1769)
                     /locus_tag="VFV26_03755"
     CDS             complement(1050..1769)
                     /locus_tag="VFV26_03755"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4845307.1"
                     /translation="MIPLPLLPGFSRWGAHLEALLARPEALWIHGPAGSGVSTLAAEL
                     ARRRGVSWTEAHDPEEGAAWLAAHPGGVVAGRGPAPGALPCLVLRLPDLEEDPACIPG
                     LLAALAAEEGIPTPWPPALSALPCPGNLRELRNRLLRWKLLGQLPGPEPGGPLRFEAE
                     DLASNLHDLERFLLYRALRRAYGNRVEAAARLGVSRRQLYLLIRRHGDPVRGESGAGD
                     LPHRMRKRQPAQNSSPESGAR"
     gene            complement(1798..>2146)
                     /locus_tag="VFV26_03760"
     CDS             complement(1798..>2146)
                     /locus_tag="VFV26_03760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845308.1"
                     /translation="ELRVETLQGNGNGESEEDEEQTVVKVFATMLEPLEFFQGQGFSG
                     VLVRLPPGECPPRLETLLRDHRGDLPVTFEYRSKEGLVARVRAGRDLRLKHDPDLAEK
                     LAKEAGCTLTWTY"
BASE COUNT          300 a          723 c          807 g          316 t
ORIGIN      
        1 ccactccttg ggcggcaggt cgttctccac gcagctcttc tcgaggagga acgccgcgag
       61 atcgccgatg tcctccttgc gctcgcgcag cggcggcacg tgcacgggca cgacgttgag
      121 gcggtagtag agatcctcgc ggaagcggcc ggccttcacc tccgcctgca ggtcgcggtt
      181 ggtgagggcg atgaggcgca cgtccacggg gatgggccgg ttgccgccca ggcggtccac
      241 cgtgcgctcc tggaggacgc ggagcagctt gccctggagg cccaggggca gctcgcccac
      301 ctcgtccagc accagggtgc cgccatcggc ctgctcgaag cggccctgct tcatgcccgt
      361 ggcgccggtg aaggcgccct tctcgtagcc gaacagctcg gattccagaa ggttctcggg
      421 gatggccgcg cagttgatgg ccacgaaggg gccgctgcgg cgggggctgg agccgtggat
      481 gagcttggcc agcagctcct tgccggtgcc gctctcggcc tggatgagga tggtggcgcg
      541 gctgtccgcg gcgcggcggg ccagggccag ggtctcgccc agggccggat cctgcgtgag
      601 gatcacgggg gcctcggcgg gctcctcggc cttgaggtgg ccttcggact tcagggcctt
      661 gttcagggcg gagctgagtt cctcggggct gaagggtttc gagaggaagt cgaaggcgcc
      721 caggcgcatg gcctcgcggg ccgtctccag gctgccgaag gcggtgatga gcagcacggg
      781 cagggcggga tccacggcct tcaggcgggc cgtgagctgc aggccgtcca tgccgggcat
      841 gcgcaggtcc gtcaccacgg cgtcgtaggc gccgggacgg atcatgcgga gggcctcctc
      901 gccgccccgg gcctgttccg cgaagaaacc tgagcgtttc aggctcatgg ccatgccatc
      961 ccgcattccg ggatcgtcgt ccaccaccag cacccgaagg ggagtcgcca tatctgagct
     1021 tccatgcggc cagcgtggcc gcattcccgt tatcgggctc cggactccgg actggagttt
     1081 tgcgcaggtt gccgcttccg catccggtgg ggaagatccc cggcgccgga ctctccccgg
     1141 acgggatccc cgtggcggcg gatgagcagg tagagctggc ggcggctcac gcccaggcgg
     1201 gcggcggcct ccacccggtt gccataggcc cggcgcaggg cccggtagag aaggaagcgt
     1261 tccagatcat gcaggttgga ggccagatct tccgcttcga agcggagggg accgccgggc
     1321 tcgggccccg gcagctggcc cagcagcttc cagcgcaaca ggcggttgcg gagctcccgc
     1381 aggttgccgg ggcagggcag ggcggacagg gccgggggcc agggcgtggg tatcccctcc
     1441 tccgcggcca gggccgccag cagtccgggg atgcaggccg gatcctcttc caggtccgga
     1501 aggcgaagga ccaggcaggg cagggctccg ggggcggggc cccggcccgc caccacgccc
     1561 cccgggtggg cggcaagcca cgcggcgccc tcctccgggt catgggcctc ggtccaggaa
     1621 acgccccggc ggcgggccaa ttccgccgcc agggtggata cccccgatcc cgcggggccg
     1681 tggatccaca gggcctcggg ccgcgccagc agcgcctcca ggtgggcgcc ccaccggctg
     1741 aagccgggca ggagggggag ggggatcaca gggactccgt gccggggggg ccaggcgtca
     1801 ataggtccag gtcagggtgc atccggcctc cttggccagt ttttccgcca gatcgggatc
     1861 gtgcttcagt cgaaggtcgc ggccggcccg cacgcgggcc acgaggccct ccttcgagcg
     1921 gtattcgaag gtcacgggca ggtccccccg gtggtcccgg aggagggtct ccagacgggg
     1981 cgggcattcg cccgggggga gccgtaccag gacaccggaa aaaccttggc cctggaagaa
     2041 ctcgaggggc tccagcatgg tggcgaagac cttcaccacg gtctgctcct cgtcctcctc
     2101 ggattcgcca tttccgttgc cctggagggt ctccaccctc agctcg
//
LOCUS       DASUDT010000180         6714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_318486, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000180 DASUDT010000000
VERSION     DASUDT010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6714
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318486"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..1754
                     /gene="fliF"
                     /locus_tag="VFV26_03765"
     CDS             69..1754
                     /gene="fliF"
                     /locus_tag="VFV26_03765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HEX4845309.1"
                     /translation="MAGDTNLAEQLTSAFKGMSATQRTMVAAISLTVLLALGGLGLWA
                     SQESKGVLAANVSPQEASSIVSQLDKMQVPYELSSDQRTILVPESKVGQLRLKFAGDG
                     LLSGDKLGFEKLENAGLGTTDFSQKVIHRRAMEAQLAKTIMSLQQVSEATVHITPAND
                     SPFLTDKEDAKASVLLKLRGARILPDENTQAIVNLVAASVEGLKPEQVVIIDQYSRIL
                     SRTGRDPMVGASDSQKKVAREEEDHLVRRVTELLEPVVGIGKVRATAHVDLDFDKVKI
                     NEERFDPQGQVERSIQQKDEKVQKRDSGAGVPGTASNVAPANAGAAASGLVENSEKKE
                     TTTNFEISKTVSATERATGTVKRVTLAVIVDHIGTWEKDAKGEPVLKQTPRSAEELKK
                     IRDQVAAAVGIQPKRGDELTVEDMAFATLQVNPKEEAEAKKQFWVDLGRQFLPSLIWG
                     LAGFVVFFMIILPMLKRMSAAINRPAPMRVASADGGDPGSAASMAARKNAQVKSMTEI
                     EAEIEAELNADAAFSAPEARRRELIRKRLQEGSNEDPETMASLVRSWLLEEGR"
     gene            1758..2762
                     /gene="fliG"
                     /locus_tag="VFV26_03770"
     CDS             1758..2762
                     /gene="fliG"
                     /locus_tag="VFV26_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEX4845310.1"
                     /translation="MAKLSGSQKAAVLMVSLGDETAANIFKYLEEDEIQTISREIAIT
                     KHVQPEIAEEVMEEFHTMTQARSYISQGGIEYAKKLLIKSVGPEVARKIIDRLVKALE
                     SSAGFTSLERANPQQLSKFIQNEHPQTIALILAHLNASQAAELISSLPEALRSDVAMR
                     MASLQEISPEVVRRISLILEQKLEALGSFATEAYGGVRAVAELFNRMDRNTGRAVLEK
                     IETENPQLAASIRDLMFVFDDILLIDDNGITEILKRADKKTLTVALKGTSEELQNQFF
                     RNMSSRAVELMKEEMEFMGPVKLKDVEKSQHEVVEIVRQLEEEGVISIGGGGGEDYVS
                     "
     gene            2771..3502
                     /locus_tag="VFV26_03775"
     CDS             2771..3502
                     /locus_tag="VFV26_03775"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HEX4845311.1"
                     /translation="MTRKGFIRSEDLQHAHLEAFPYFPVDATLTHGGMDGGESSVASD
                     LGDDGASQVPPEQRLVDRLQEAERQAQEIARRAYEEGFAAGEAEGRTFGESQYKGYMQ
                     RLEGQLADLADATLALRESLNEQLIALALAVGEHLAVQQIERSPAAVKALMEGVLEEL
                     PFPLPRGHREGEAPLQVFLNPLDLEHLGDRFVGHAGLILHSDVALSRGSLRVETLQGI
                     LNGSLERRREQLMQLIARMREGGTP"
     gene            3499..4863
                     /locus_tag="VFV26_03780"
     CDS             3499..4863
                     /locus_tag="VFV26_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HEX4845312.1"
                     /translation="MSGAALDPALLTARLRGLPKGDWMGRVTKVVGLVVESTGPDCSV
                     GEQMLIHGADATGRPRLIHAEVVGFSGQRVLLMPIEETEGIRPGLWVESTGHQSELPL
                     SNELLGRVIDPLGRPLDGGPPIEATAHLPLQGPPPNPMQRKRINEVLSTGVRVIDGLL
                     TLGKGQRVGIFSGSGVGKSTLLGMVARNTSAEVNVITLVGERGRELREFIENDLGEEG
                     LKRSVVVVSTSDQTPLLRLRCAMAGTTVAEYFMRQGKDVLLMMDSVTRFAMAQREVGL
                     SAGEPPSSRGYTPSVFALLPRLMERAGTFEGMGSITGIYTVLVEGDDMNEPISDAVRG
                     ILDGHVVLSRKLASKNHFPAIDVLPSLSRLFSALAPPEQKQLASKLRDLMATYQDAED
                     LIQIGAYTRGSSAAIDQAIQFQPAIQSYLRQATAETADHRQAMLAMGQIFGIDLTPFL
                     KGKT"
     gene            4863..5312
                     /gene="fliJ"
                     /locus_tag="VFV26_03785"
     CDS             4863..5312
                     /gene="fliJ"
                     /locus_tag="VFV26_03785"
                     /inference="COORDINATES: protein motif:HMM:TIGR02473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HEX4845313.1"
                     /translation="MAARFQFRLEPLRKLREALEREAERALARALQAEREVRDHLASL
                     ADQRQALFESRRTAPGQVLDLTLWRNGERFLVVLERRQIEGYERLREASAQVAAAREA
                     LVLAHRNHLMLVRLKERRALQHAREQQLREAIEMDELAVLRYHRQSA"
     gene            5323..5868
                     /locus_tag="VFV26_03790"
     CDS             5323..5868
                     /locus_tag="VFV26_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845314.1"
                     /translation="MNPRFLLWISAPIALSAGVLWLSAQEPKAEPKGAAAEGVKVAEL
                     ASQLQAREKSIAQKEGELRQLEQRLNTLQATLDKDRGDLATREKAVQEALAKLEQLRL
                     RPVIDPQIIRTYEAMDPAAGAQAMKELAGQNQDVAVALLAGMAPKKAAKLMDQLAPLD
                     AKLAGRLSERVGLSKPKDPGA"
     gene            5943..>6714
                     /locus_tag="VFV26_03795"
     CDS             5943..>6714
                     /locus_tag="VFV26_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845315.1"
                     /translation="MLPASATTVLAVPDRPAAERPESPDPDASDGRFAGLMAQFVQVR
                     RDPPPPDAETPDASPSRTRTEAPSEPGASRPEAPASSARPKTETPDAPEAQSALAPPA
                     TMPSTPGTPQAQAPSPAAVAILAEVPIQAAPSASSGIQGQVPAAEAPAASPLVQPLAE
                     AAGPDPEATIPAALASVLSQPLGPKAPKVQGPVEAASLPTPGVALRDPAAGPAVPKTE
                     DSKPGVAALQISAAKPPEHSAETKPAILAPVSAPETAPA"
BASE COUNT         1195 a         2475 c         2132 g          912 t
ORIGIN      
        1 catgcgcatg cagatgtagc gcgggccgag cttcccggcg cggcctcacc cctgactgag
       61 gaacgcctat ggccggggac acgaacctcg cggaacaact gaccagcgcc ttcaaaggca
      121 tgagcgccac ccagcgcacc atggtggcag ccatttccct gacagtgctc ctggccctcg
      181 gcggcctggg cctctgggcc agccaggaat ccaagggcgt cctggcggcc aatgtctcgc
      241 cccaggaagc cagctccatc gtgtcccagc tggacaagat gcaggtcccc tacgagctca
      301 gctcagacca gcgcaccatc ctcgtgcccg aaagcaaggt gggccagttg cggctgaagt
      361 tcgccggcga cggcctcctg tccggcgaca agctgggctt cgagaagctg gagaatgcgg
      421 gactcggcac cacggatttc tcccagaagg tcatccatcg gcgggccatg gaagcccagc
      481 tggccaagac catcatgagc ctccagcagg tatccgaggc cacggtccac atcacgcccg
      541 ccaacgacag ccccttcctc acggacaagg aggacgccaa ggccagcgtg ctgctcaagc
      601 tgcgcggcgc ccggatcctt cccgacgaga acacccaggc catcgtcaac ctggtggccg
      661 ccagcgtgga gggcctgaag cccgagcagg tggtcatcat cgaccagtac agccgcatcc
      721 tctcccgcac cgggcgcgat cccatggtgg gcgccagcga ttcccagaag aaggtggccc
      781 gcgaagaaga ggaccacctc gtgcgccgcg tcaccgagct gctggaaccc gtcgtcggca
      841 tcggcaaggt gcgcgccacg gcccacgtgg acctggactt cgacaaggtg aagatcaacg
      901 aggagcgctt cgatccccag ggccaggtgg agcgcagcat ccagcagaag gacgagaagg
      961 tccagaagcg ggattcgggc gccggcgtcc ccggcaccgc cagcaacgtg gccccggcca
     1021 acgcgggcgc ggcggcctca ggcctggtcg agaactccga gaagaaggag accaccacca
     1081 acttcgagat cagcaagacc gtctccgcca cggagcgcgc caccggcacg gtgaagcgcg
     1141 tgactctggc cgtgatcgtg gaccacatcg gcacctggga gaaggacgcc aagggcgagc
     1201 ccgtgctgaa gcagacgccc cgcagcgcgg aggaactgaa gaagatccgg gaccaggtgg
     1261 ccgccgccgt ggggatccag cccaagcgcg gcgatgaact cacggtggag gacatggcct
     1321 tcgccaccct ccaggtgaat cccaaggagg aggccgaggc caagaagcag ttctgggtgg
     1381 acctgggccg ccagttcctc ccctccctca tctggggcct ggccggcttc gtggtcttct
     1441 tcatgatcat cctgcccatg ctcaagcgca tgtctgcggc catcaaccgg ccggcgccca
     1501 tgcgcgtggc cagcgcggac ggaggcgatc ccggctccgc ggccagcatg gccgcccgca
     1561 agaacgccca ggtgaaatcc atgacggaga tcgaggccga gatcgaagca gagctgaatg
     1621 cggatgccgc cttcagcgcc cccgaggccc gccgccggga gctcatccgg aagcgcctcc
     1681 aggagggttc caacgaagac ccggaaacca tggcctcgct ggtgcggtcc tggctcctcg
     1741 aagaggggag gtaggccatg gccaagctga gcggcagtca gaaagccgcg gtgctcatgg
     1801 tctccctcgg ggacgagacc gccgccaaca tcttcaaata cctggaagag gacgagatcc
     1861 agacgatctc ccgcgagatc gccatcacca agcacgtgca gcctgaaatc gcggaggagg
     1921 tcatggagga gttccacacc atgacccagg cccgcagcta catcagccag ggcggcatcg
     1981 agtacgccaa gaagctgctc atcaagtccg tgggccctga agtggcccgc aagatcatcg
     2041 accgcctggt gaaggccctg gaatccagcg ccggcttcac cagcctggaa cgcgccaacc
     2101 cccagcagct gtccaagttc atccagaacg agcaccccca gaccatcgcc ctgatcctgg
     2161 cccacctgaa cgcctcccag gcggcggagc tcatctccag cctgcccgag gccctccgca
     2221 gcgatgtggc catgcgcatg gccagcctcc aggagatcag ccccgaggtg gtccgccgca
     2281 tcagcctcat cctcgaacag aaactcgagg ccctgggctc cttcgccacg gaagcctacg
     2341 gcggcgtccg cgccgtggcc gagctgttca accgcatgga ccggaacacc ggccgcgccg
     2401 tgctggagaa gatcgaaacc gagaaccccc agctggccgc cagcatccgc gacctcatgt
     2461 tcgtgttcga tgacatcctg ctcatcgacg acaacggcat caccgagatc ctcaagcggg
     2521 cggacaagaa gaccctcacc gtggccctca agggcaccag cgaggagctg cagaaccagt
     2581 tcttccgcaa catgtccagc cgtgccgtgg aactcatgaa agaggagatg gagttcatgg
     2641 gccccgtgaa gctgaaggac gtggagaaat cccagcacga ggtcgtcgag atcgtccgcc
     2701 agcttgaaga ggaaggcgtc atcagcatcg gcggcggcgg cggcgaggac tatgtctcct
     2761 aagggaatcc atgacgcgta agggcttcat ccgatccgaa gacctccagc acgcccacct
     2821 ggaggccttc ccctatttcc ccgtggacgc cacgctcacc cacggcggca tggatggcgg
     2881 cgaaagctcc gtggcctccg acctgggcga tgacggtgct tcgcaggtgc cgccggaaca
     2941 gcgcctcgtg gaccggctcc aggaggcgga acgccaggcc caggagatcg cccgccgcgc
     3001 ctacgaggag ggcttcgccg ccggggaggc cgagggccgt acgtttggcg aaagccagta
     3061 caagggctac atgcagcgtc tggaggggca gctggccgac ctggccgatg cgaccctggc
     3121 cctccgcgag tccctgaatg agcagctcat cgccctggcc ctcgccgtgg gcgagcacct
     3181 cgccgtccag cagatcgagc gctctcccgc ggccgtgaag gccctgatgg aaggcgtgct
     3241 ggaggaactc cccttccccc tgccccgggg gcaccgggaa ggcgaggcgc ccctgcaggt
     3301 gttcctcaat cccctggacc tggaacacct gggcgaccgc tttgtggggc acgctggcct
     3361 catcctccat tccgacgtgg cgctttcccg cggcagcctg cgggtcgaaa ccctccaggg
     3421 catcctgaac ggcagcctgg agcgccgccg ggaacagctc atgcaactca tcgcccgcat
     3481 gcgcgagggt ggaaccccat gagcggcgcg gccctcgacc ccgccctgct cacggcccgc
     3541 ctgcgcggac tgcccaaggg cgactggatg ggacgggtca ccaaggtggt gggcctggtg
     3601 gtggaatcca ccggaccgga ttgttccgtg ggcgagcaga tgctcatcca cggtgccgat
     3661 gcgaccggcc gcccgcggct catccatgcg gaagtggtgg gcttttccgg gcagcgggtg
     3721 ctgctcatgc ccatcgagga gaccgagggc atccggcccg ggctctgggt ggagagcacg
     3781 gggcaccaat ccgagctgcc cctctccaac gagctgttgg gccgcgtcat cgatcccctg
     3841 ggccgccccc tggacggcgg cccgcccatc gaggccacgg cgcacctgcc gcttcagggg
     3901 ccgcccccca accccatgca gcggaagcgg atcaacgagg tcctctccac gggcgtgcgg
     3961 gtcatcgacg gcctgctgac cctgggcaag ggccaacggg tgggcatctt ctctggctcc
     4021 ggcgtgggca agtccaccct gctcggcatg gtggcccgca acacctcggc cgaggtcaac
     4081 gtcatcactc tggtgggtga gcgcggccgc gagctccgcg aattcatcga gaacgacctg
     4141 ggcgaggagg ggctcaagcg gagcgtggtg gtggtctcca ccagcgacca gacgcccctt
     4201 ctgcgcctgc gctgcgccat ggcgggcacc accgtggccg agtacttcat gcgccagggc
     4261 aaggacgtgc tgctgatgat ggacagcgtc acccgcttcg ccatggccca gcgcgaggtg
     4321 ggcctcagcg ccggggaacc gcccagttcc cggggctaca cgccctcggt cttcgccctc
     4381 ctgccccgcc tcatggaacg ggccggcacc ttcgagggca tgggttccat caccggcatc
     4441 tacaccgtcc tggtggaggg cgatgacatg aacgagccca tcagcgatgc cgtgcgcggc
     4501 atcctggacg gccacgtggt gctgtcccgg aagctggcct ccaagaacca cttccctgcc
     4561 atcgatgtgc ttcccagcct ctcccgcctc ttcagcgccc tggcgccgcc cgagcagaag
     4621 cagctggcca gcaagctgcg cgacctcatg gccacctatc aggatgcgga ggatctcatc
     4681 cagatcggcg cctacacccg gggctccagt gccgccatcg accaggccat ccagttccag
     4741 cccgccatcc agtcctacct ccgccaggcc accgccgaaa ccgcggacca ccgccaggcc
     4801 atgctcgcca tgggccagat cttcggcatc gatctcacgc cgttcctgaa aggcaagacc
     4861 tgatggccgc ccggttccag ttccgcctcg agcccctgcg caagctgcgg gaggctctgg
     4921 aacgcgaggc cgagcgggcc ctggcccggg ccctccaggc cgagcgggag gtccgtgacc
     4981 acctggccag cctggctgac cagcgccagg cgctcttcga atcccgccgc accgccccgg
     5041 gccaggtcct cgacctcacc ctctggcgca acggggagcg cttcctcgtg gtgctggaac
     5101 gccgccagat cgaaggctac gagcgcctcc gggaggcctc cgcccaggtg gccgccgccc
     5161 gcgaggccct ggtcctggcc caccggaacc acctcatgct ggtgcgcctc aaggagcgcc
     5221 gggcccttca gcatgcgcgg gagcagcagc tccgcgaagc catcgagatg gacgagctgg
     5281 ccgtcctccg ctatcaccgg caaagcgcct aggaggccca ccatgaaccc ccgcttcctc
     5341 ctctggatct ccgcccccat cgcgctttcc gctggggtcc tctggctgtc cgcccaggag
     5401 cccaaggccg aacccaaggg cgccgccgcc gaaggggtga aggtggccga gctggcctcc
     5461 cagctccagg cccgggagaa gtccatcgcc cagaaggaag gcgagctccg gcagctggag
     5521 cagcgcctca acaccctcca ggccaccctc gacaaggacc ggggggatct ggccacccgc
     5581 gagaaggccg tgcaggaggc cctcgcgaag ctggaacagc tccggctgcg cccggtcatc
     5641 gatccccaga tcatccgcac ctacgaggcc atggatcccg ccgccggcgc ccaggccatg
     5701 aaggagctgg cggggcagaa ccaggacgtg gccgtggccc tgctggccgg catggccccc
     5761 aagaaggccg ccaagctcat ggatcagctg gcccccctgg acgccaagct cgcaggccgc
     5821 ctgtcggaac gggtgggcct gagcaagccg aaggatccgg gcgcctgatc ctttctgccc
     5881 atcgaccccg gcacggtcct ggcggtgacc ccccatccgg atgatccggg cgcggggttt
     5941 ccatgcttcc agccagcgcg acgacggttc tcgcggtccc cgaccgccct gcggcggagc
     6001 gcccggagtc cccggatccc gatgcctcgg atggccgctt cgcgggcctg atggcccagt
     6061 tcgtccaggt ccggcgggac ccgccacccc ctgatgccga gacaccggat gcctcgccgt
     6121 cccgaacccg gacggaggcc ccctcggaac cgggtgcttc ccgcccggaa gcgccggcat
     6181 catccgcgcg cccgaaaacc gaaacaccgg acgcccccga agcccagagc gccttggcac
     6241 ccccggccac catgccttcc acccccggca caccccaggc gcaggcacct tcccccgcgg
     6301 ccgtggccat cctcgcggag gtgccgatcc aggccgcgcc gtcggcctcc tccggcatcc
     6361 aaggccaggt tccagcggcg gaggcacccg cggcttcccc cctggtccag cccttggccg
     6421 aggccgccgg cccggatccc gaagccacca tcccggcagc ccttgcctca gtcctgtccc
     6481 agccattggg ccccaaggca cccaaggtcc aaggccccgt cgaggcggca tccctgccca
     6541 cccccggggt cgcgctccgg gaccccgccg ctggccctgc ggttcccaaa accgaggact
     6601 cgaaacccgg cgttgccgcg ctccagatat cggcggcgaa gcccccggag cactccgccg
     6661 aaaccaagcc cgccatcctg gcccctgttt ccgccccgga aactgcccct gcga
//
LOCUS       DASUDT010000181         2375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_75528, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000181 DASUDT010000000
VERSION     DASUDT010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75528"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..854
                     /gene="moaC"
                     /locus_tag="VFV26_03800"
     CDS             354..854
                     /gene="moaC"
                     /locus_tag="VFV26_03800"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF006870.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX4845316.1"
                     /translation="MAELTHLDPEGRPKMVDVSAKAVTRRLAVAAGYLELDGPAAEAL
                     ERGGGPKGDPWSVARIGAVGGVKRAADLIPLAHPLAIEAVDVAHHWDPATRRAWLRVS
                     VSCEGRTGIEMEALAGVTVGLLVLYDMLKAVSHGMALGPARLLRKEGGRRGTVTLPWP
                     ECPWMP"
     gene            1012..2067
                     /locus_tag="VFV26_03805"
     CDS             1012..2067
                     /locus_tag="VFV26_03805"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX4845317.1"
                     /translation="MRLAALTLVLASLSLGLQAAPKRTSKKTSSRPADGAVHVIRKGE
                     TAAAVARANGMSLAELGALNPGRKLSKLAVGDRLKVRASRTAAVDLDDAAPVAALPAI
                     PRPALAALPTPAVVSPGPMPHLERLLPYQVKAVPPVAGNTAAASAHEAHQAPGTPSQL
                     LARMQSVMPPVSEAELKALLPTFAAADPDRLDLLWPVETRTISSAWGPRMRTKTVRVK
                     NQRKKRIRYKGRHRGIDFSAPTGTAVFAALDGQVVLSGKHKQYGNYVVVDHGNGVATL
                     YAHHKLNLVREGDIVRRGQKIAEVGRTGNATGPHLHFELKVGGLHQNPLPVLNDDEEI
                     SADLAAQNALLGTGARR"
     gene            2177..>2375
                     /locus_tag="VFV26_03810"
     CDS             2177..>2375
                     /locus_tag="VFV26_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845318.1"
                     /translation="MPLYRASVQALGAFVLLAVALACGGKKAESTAAPSTTVKVSGTV
                     TYARVPLAKDSNGVPTGLVDSS"
BASE COUNT          363 a          886 c          776 g          350 t
ORIGIN      
        1 atgatccgcg ggggaccgcc tgctcgcttg gctcgcgaag tcccccccga ggcccccgcc
       61 caggtctcat accaagccgc catcagtgat agagatccgc cacggagtca cggagcccac
      121 ggagatggca cggaggcctc cgtgaacctc cgtgcatggg caggccagag gccgcttccg
      181 gcaaggccgg aagccatggg aggcgccggg cacggattcc cccaaaggat ccgtgcccgg
      241 cgtctcccct gtgcccatgc tctgcgtctc cgtggtgaat cctttacgat tgaaagcgaa
      301 cgggtatcag gcaaagcctg aaacccgggc cgtcccctga ctccggagcc aacatggctg
      361 aactcacgca cctcgatccc gaaggccgtc cgaagatggt ggatgtctcc gccaaggccg
      421 tgacccggcg cctggccgtg gcggcgggct acctggagct ggatggcccc gctgccgagg
      481 ccctggaacg ggggggcggc cccaagggcg atccctggtc cgtggcccgc atcggagccg
      541 tggggggcgt caaacgggcc gccgacctca tccccctggc ccatccgctg gccatcgagg
      601 ccgtggatgt ggcccaccac tgggatcccg ccacccgccg ggcctggctc cgggtgtcgg
      661 tgagctgcga ggggcgcacg ggcatcgaga tggaggccct ggccggggtg accgtgggcc
      721 tgctggtgct ctacgacatg ctcaaggccg tgagccacgg catggccctg ggcccggccc
      781 gcctgctgcg caaggagggt ggccgccgcg gcaccgtcac cctgccctgg ccggaatgcc
      841 cctggatgcc ctgaaggcgg ggggtcagtt ggaaaacatt tgcatatgca gggttccagg
      901 cccccggtag gatggatctg gactgttcct attcatcatg gacccggggt cacgaccccc
      961 tcaaggaggc ctagcgaagc aggcttttcc gttccagccg ggagttcccc catgcgtctt
     1021 gccgccctga ccctcgttct cgcgtccctc agcctcggcc tccaggccgc cccgaagcgg
     1081 acctccaaga agacctcctc ccggcctgcg gatggcgcgg tccatgtgat ccgcaagggt
     1141 gagaccgccg ccgcagtggc tcgcgccaac ggcatgagcc tggccgaact gggcgccctg
     1201 aatcccggcc ggaagctgtc gaagctggcc gtgggcgatc gcctgaaggt gcgtgcctcc
     1261 cggaccgccg ccgtggacct cgatgacgcg gctcccgtgg ccgccctccc cgccattccc
     1321 cggcccgccc tggcggccct gcccaccccg gccgtggtgt ccccgggccc catgccccac
     1381 ctggagcgcc tgctgcccta ccaggtcaag gcggtgcctc cggtggccgg caacaccgcg
     1441 gcagcctcgg cgcacgaggc gcatcaggcc cccggcaccc cctcccagct cctggcccgg
     1501 atgcagtcgg tcatgccgcc ggtcagcgaa gctgaactca aggccctgct ccccaccttc
     1561 gcggcggcgg atccggatcg tctggacctg ctctggcccg tggagacccg gaccatcagc
     1621 tccgcctggg gcccccgcat gcgcaccaag accgtccggg tgaagaacca gcgcaagaag
     1681 cggatccgct acaagggccg gcaccggggc atcgatttct cggcccccac gggcaccgcc
     1741 gtgttcgccg ccctcgacgg ccaggtggtg ctgtctggaa agcacaagca gtacggcaac
     1801 tatgtggtgg tggaccacgg gaacggtgtc gccaccctct acgcccacca caagctgaac
     1861 ctcgtccgcg agggcgacat cgtccgccgg ggtcagaaga tcgccgaggt gggccgcacc
     1921 ggcaacgcca cgggcccgca cctccacttc gagctcaagg tcggcggcct ccaccagaac
     1981 cccctgcccg tcctcaacga tgacgaggag atctccgccg accttgcggc gcagaacgcc
     2041 ctgctgggaa ccggcgcccg ccgctgaacc tccccgcctc ccgcggcaca ggaaggaagc
     2101 gccccgctgt gtcccggcgc gggacccacc gtggacgcca tgctagactt ggctctttcg
     2161 ccgtttcgag gtggtcatgc cgctgtaccg agcttccgtc caggccctgg gggcctttgt
     2221 ccttctggca gtggcgctgg cctgcggggg caagaaggct gaatccaccg ctgctcccag
     2281 caccaccgtc aaggtatcgg ggacggtcac ctacgcccgg gtgccgctcg ccaaggactc
     2341 caatggcgtg cccaccggcc tggtggacag ttccg
//
LOCUS       DASUDT010000182         4693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_848746, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000182 DASUDT010000000
VERSION     DASUDT010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848746"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VFV26_03815"
     CDS             <1..891
                     /locus_tag="VFV26_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845319.1"
                     /translation="TKNPDDRFQTAEDFAKALRAAKDPSWTGQMDEVTSLLQTAAPTA
                     PARSAASASTLQTPAAPTAPIPVSAPAAVQPATRPSRGNRGLWLGLAGLLLVGAGVTG
                     WWLLRQAPAPAGSTEGPATDSANPNAQAPRAAGANPAGSAVKSSLQTAPSGSVPTPTE
                     PLAQEAKSPGPGPAEPRAIDQPERYEPEKLDKLQPHERLNLGNVSMSEAIQLADSQPD
                     KAIHGFRQAIKADPYNVNAHAWLATVLHDQGRTGEFIQELREARRLGILGQMATRNIR
                     FRAALKQARFNRKLPPDLAD"
     gene            894..1601
                     /locus_tag="VFV26_03820"
     CDS             894..1601
                     /locus_tag="VFV26_03820"
                     /inference="COORDINATES: protein motif:HMM:NF025973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III domain-containing protein"
                     /protein_id="HEX4845320.1"
                     /translation="MTKRKDEPGGLEARLNHRFSSPALLQEALTHTSAAKGRDNQRLE
                     FLGDALLNFSVALLLHRERPDWQEGPMSKFRGVLVRTDSLHRWAMDLGLDRALAATHP
                     RKAPPMGPKPLADALEALLAAVYLDAQASGRDGAAIVQAAVEARFLDSVRSADPEAWT
                     RLDPKTTLQEAAARLGLPAPGYAQISQSGPGHAPVFTVQVTVGTHRAEASGPTRKRAE
                     SDAARQLLPLLADSSQN"
     gene            1605..2363
                     /locus_tag="VFV26_03825"
     CDS             1605..2363
                     /locus_tag="VFV26_03825"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEX4845321.1"
                     /translation="MRYTPYLPVYRGVRLKIYPTLNLQHGRVVPTSGLGEAFMESPLD
                     LAARLLDEGATRMALVDVDAAMGKGNNRELIAQILQRCHARGRKVCIQVAGGIRSSDQ
                     AQFFIDQGAVWLVAGTILHKSSMVSEQLMARFQPFLTAAIDARGGQVHRSGWVDTANL
                     SALDLALRAKAYGFKRLLFVDIPEEPNADPDFDTAQALATATGLPLVMGGSITTLQHL
                     DAAQAHHGLKGALVDALLFRQDPGLRALLQAACA"
     gene            2374..4158
                     /locus_tag="VFV26_03830"
     CDS             2374..4158
                     /locus_tag="VFV26_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845322.1"
                     /translation="MTEPEGTFLASLAEPDRVHFRHLALVRPQLPTESQVHMLEGLAR
                     TLASPRLLTLMARTPHWLAHWPILLGLAENEATPESIRRDLEMVVSLFDQMREMDHAA
                     PAEKEDRAEAVKTLYSQLTPALKPVAKLLAKQIAKTVSATGNTQELAPLPGEHPDWEA
                     LTTPPDPLPPQASTQGLHREDRLARAQQTAQPDELLDFLVDADADLRMAALQNPLISE
                     DLVREALGRSAVADFFEEVYAEARWYFREPVRESLQGAPGCPADLSRRLAVSGRLVAA
                     LERGGQDQAFLRRVVSLFTQLEEGEYQFITYWAKRQSPQLLRVVKHFYDRLLRQRSGL
                     SSALPERGEDGRWATLEERVFLATQATQEDQIVQVLKDPDPQVFRLALENPALTPRIL
                     ASTLPVLDRGRAELVATHAAWRSEPLVAEALVHHPHLSEATALSLMDHLPGLKPAIEI
                     LRDPRLQHLEVKRRAMETLRALYLGMDVPDRITALRASGGELMRHLPQEVLQDEETLR
                     RMVSDRQLDPGILLRLARNKLTPRAVLEQIASHPVLMAHAAIMSELLLNPKTPKEASS
                     RIWGLLSEPEQQQLLRSPHLPSILRNLG"
     gene            4201..>4693
                     /locus_tag="VFV26_03835"
     CDS             4201..>4693
                     /locus_tag="VFV26_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845323.1"
                     /translation="MRRPAANLIPVAVALVCLPFATSCRPKPRVPGWVQAAPGGSVAA
                     FSGEAAWMLTHKDVQSLIAREPMVERALDLFLQKARINPRTETGRVTFHVIGVPQQGG
                     QTIQEGLQKGLEQVLIQFNQFKDPAALMSALTESFPQEGSLHLQGRDWPLYVILDFEA
                     KGTK"
BASE COUNT          752 a         1819 c         1439 g          683 t
ORIGIN      
        1 acgaaaaacc ccgatgaccg tttccagacc gccgaggact tcgccaaggc cctgcgcgcc
       61 gccaaggatc catcctggac tgggcaaatg gatgaggtga cctccctgct ccagaccgct
      121 gcgcccacgg cgccggccag atccgcggct tcggcatcaa ccctgcaaac cccggcggcc
      181 cccacggccc cgattccagt gtcggcgccg gccgccgttc aacccgcgac ccggccttcc
      241 cgcggaaacc gcggcctctg gctcggcctc gcaggcctgc tgctggtggg cgcgggggtc
      301 acggggtggt ggctcctgcg ccaggctccc gccccggccg gatccacgga aggtcccgcc
      361 accgattcgg cgaatccgaa tgcgcaggcc ccccgcgccg ccggagccaa cccggccgga
      421 tcggcggtga agtccagcct tcagaccgcg ccctccggtt ccgtgccaac gcccacagag
      481 cccctggccc aggaagccaa gtctcccgga cccgggcccg ccgaaccccg ggccatcgat
      541 cagccggaac gctacgagcc cgaaaaactc gacaagctcc agccccatga acggctcaac
      601 ctcggcaacg tctccatgag cgaggccatc cagctggcgg acagccagcc cgataaggcc
      661 atccacggat tccggcaggc catcaaggcg gatccataca acgtgaatgc ccacgcatgg
      721 ctggcgacag tgctccatga ccaggggcgc accggcgagt tcatccagga gcttcgcgag
      781 gcccgccgcc tgggcatcct ggggcagatg gccacccgca acatccgctt ccgtgccgcc
      841 ctcaaacagg cccgcttcaa ccgcaagctg ccgcccgacc tggcggattg accatgacga
      901 aacgcaagga cgaaccgggc ggactcgaag cccgcctgaa tcatcgcttc tccagtccgg
      961 ccctgctcca ggaggcgctg acgcacacct cggccgccaa gggccgggac aaccagcgcc
     1021 tggaattcct gggcgacgcc ctgttgaatt tctccgtggc cctgctcctc caccgcgagc
     1081 gcccggattg gcaggagggc cccatgagca agttccgggg cgtgctggtg cgcacggatt
     1141 cgctgcaccg gtgggccatg gatctgggcc tggaccgggc cctggcagcc acccatcccc
     1201 ggaaggcccc ccccatgggg cccaagccac tggcggacgc actggaggcc ctgctggccg
     1261 cggtctacct cgatgcccag gcctcgggcc gggacggggc cgccatcgtg caggccgccg
     1321 tcgaggcgcg attcctcgac tccgtccgct ccgccgatcc agaggcctgg acccggctgg
     1381 atcccaagac caccctccag gaagccgccg cccgcctggg gctgcctgca cccggctatg
     1441 cccagatttc ccaatccggt ccgggccacg cgccggtttt cacggttcag gtcacggtgg
     1501 gcacccaccg cgccgaagcc agcgggccca cccgcaagcg ggcggaaagc gatgccgcac
     1561 gccagcttct ccccctgctc gcggattcct cacagaactg agccttgcgt tacactccct
     1621 atctgccggt ctaccggggt gtacgtttga agatctaccc gaccttgaat cttcagcatg
     1681 gccgtgtggt tcccacctcg gggctgggcg aagccttcat ggaatcgccc ctggatctcg
     1741 cggcccgcct cctcgacgaa ggcgccaccc gcatggccct ggtggatgtg gatgccgcca
     1801 tgggcaaggg caacaaccgc gagctcatcg cccagatcct ccagcgctgc cacgcacgag
     1861 gccgcaaggt ctgcatccag gtggccgggg gcatccgcag ctcggaccag gcccagttct
     1921 tcatcgacca gggcgctgtc tggctcgtgg ctggcacgat cctgcacaag tcgtccatgg
     1981 tctctgaaca actgatggcg cgcttccagc ctttcctcac cgcggccatc gacgcccgcg
     2041 gcggtcaggt ccaccgctca ggctgggtgg acacggccaa cctgagcgcc ctcgacctcg
     2101 ccctccgggc caaggcctat ggcttcaagc ggctcctctt cgtggacatc cccgaggagc
     2161 ccaacgccga tcccgacttc gacacggccc aggccctggc caccgccacg gggctgcccc
     2221 tggtcatggg cggcagcatc accaccctcc agcacctgga tgcggcccag gcacaccacg
     2281 gcctcaaggg cgccctggtg gatgccctgc tcttccgcca agatccgggg ctccgcgccc
     2341 tcctccaagc cgcctgcgcc tgagggagga tctgtgacgg agccggaagg cacgttcctc
     2401 gccagcctcg cggaaccgga ccgggttcac ttccgccatc tggccctggt gcggccccag
     2461 ctccccacgg aaagccaggt ccacatgctg gaaggcctgg cccggaccct ggcttcgccc
     2521 cgcctgctga ccctcatggc ccgcacgccg cattggctgg cccactggcc catcctcctg
     2581 ggcctggcgg agaacgaggc cacacctgaa tccatccgcc gcgatctcga gatggtggtc
     2641 tccctcttcg accagatgcg ggagatggac cacgccgctc cggcggagaa ggaggatcgc
     2701 gccgaggccg tgaagaccct gtactcacag ctgacgccgg cccttaaacc cgtggccaaa
     2761 ctgctggcca agcagatcgc caagacggtc tcggccacgg ggaacaccca ggaactggcc
     2821 ccgctgcccg gcgagcaccc cgactgggaa gccctcacca ccccgccgga cccccttccg
     2881 ccccaggcct ccacccaggg gctgcaccgg gaggaccgcc tcgcgagggc ccagcagacg
     2941 gcgcagcccg acgagctgct ggatttcctc gtggacgccg atgcggacct ccgcatggcc
     3001 gccctccaga atcccctcat ttccgaggat ctcgtccgcg aagcccttgg ccggagcgcg
     3061 gtggctgatt tcttcgagga ggtctacgcc gaggcccgct ggtacttccg ggagcccgtg
     3121 cgggaaagcc tccagggggc gccgggctgc ccggcggacc tgtcccggcg cctggctgtc
     3181 tccggccgtc tggtggcggc cctggagcgg ggcgggcagg accaggcctt cctccggcgg
     3241 gtcgtatccc tcttcaccca gctggaagag ggtgaatacc agttcatcac ctactgggcc
     3301 aagcggcagt cgccgcagct gctccgggtg gtgaagcatt tctatgaccg cctgctccgc
     3361 cagcgctccg ggctttcctc cgccctgccg gagcgcggcg aggatggccg ctgggccacc
     3421 ctggaggagc gcgtgtttct cgccacccag gccacccagg aggaccagat cgtccaggtg
     3481 ctcaaggatc ccgatccgca ggtgttccgc ctggccctgg aaaacccggc cctcacgccg
     3541 cgcattctcg cctccaccct gcccgtgctg gaccgtggcc gggccgaact ggtcgccacc
     3601 cacgcggcct ggcgctcgga gccgctggtg gccgaggccc tggtccacca tccccacctc
     3661 agcgaagcca ccgcgctcag cctgatggac cacctgccgg ggctgaagcc tgccatcgag
     3721 atcctgcggg atccgcggct gcagcacctg gaggtcaagc gccgcgccat ggagacgctc
     3781 cgcgccctct acctgggcat ggatgtgccc gaccgcatca cggccctccg cgcttccggc
     3841 ggcgaactca tgcgccacct gccccaggag gtgctccagg acgaggagac cctgcggcgc
     3901 atggtctccg accgccagct ggacccgggc atcctcctcc ggctggcccg caacaagctg
     3961 acaccccgcg ccgtgctgga gcagatcgcc agccaccccg tgctcatggc ccatgcggcc
     4021 atcatgtccg agctgctcct gaacccgaaa acccccaagg aggcctcctc ccgcatctgg
     4081 ggactcctgt ccgaacccga gcagcagcag cttctgcgga gtccccacct tccgtccatc
     4141 ctgcgcaacc tcgggtaaac gctcgccctg cggccccgta gccctagtcc tggagccccc
     4201 atgcgccgcc ccgccgccaa cctgatcccc gtcgcggtgg ccctggtctg cctccccttc
     4261 gcgacctcct gcaggcccaa gccgcgggtg ccgggctggg tgcaggccgc gccgggcgga
     4321 agcgtggccg ccttttccgg cgaagcagcc tggatgctca cccacaagga cgtgcagtcg
     4381 ctcatcgccc gggaacccat ggtggagcgg gccctcgacc tcttcctcca gaaggcccgc
     4441 atcaacccgc gcaccgaaac aggccgggtg accttccatg tcatcggagt gccgcagcag
     4501 ggcgggcaga ccattcagga gggcctccag aaggggcttg agcaggtgct catccagttc
     4561 aaccagttca aggaccccgc ggccttgatg tcggcgctga cggaatcctt cccccaggag
     4621 ggcagcctcc atctccaggg ccgggactgg cctctctacg tgatcctcga tttcgaagcc
     4681 aagggcacca agg
//
LOCUS       DASUDT010000183         5149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1952903, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000183 DASUDT010000000
VERSION     DASUDT010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1952903"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1924)
                     /gene="ftsH"
                     /locus_tag="VFV26_03840"
     CDS             complement(5..1924)
                     /gene="ftsH"
                     /locus_tag="VFV26_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX4845324.1"
                     /translation="MMKSVLVWLGIIALLVLAFRQIPQNNRQIEVPFSTFYTEGVGGK
                     YKSVTLSGFDVEGTYKQPEKNAKGEVIEKFRTVAPPMQDLGKVILSWKTEGQIEEFRA
                     AKPSENNFAYVLMFWAPLLVFVVLWFVFMRQAQMGGNKAMSFGKARAKGLSSSAKRIT
                     FADVAGCDEAKEELKEIVEFLKDPAKFVKLGGKIPKGVLLMGPPGTGKTLLARAIAGE
                     AKVQFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPCIVFIDEIDAVGRHRGAGLGG
                     GHDEREQTLNQLLVEMDGFEGNEGVILIAATNRPDVLDPALLRPGRFDRRVVVDRPDV
                     KGRQEILKVHTTDKIPLSPDVDLEVLARGTPGFAGADLANLCNEAALTAARGNKKWVE
                     MADFENAKDKVYMGAERRSLVMTEADKRITAYHEAGHTVVAAVVPDSDPLHKVTIIPR
                     GRALGVTWQLPVTDRYNTTRDYMESRIAIAMGGRIAEEIFFNQLSTGAANDIQQATEM
                     ARSMVTEYGMSDKLGPLNFGGGGNHEVFLGRDFAQHREISEDTARLIDVEVQEFVLRN
                     YARAKTAIETHRDQLGAIAEALLVRETLDGDDIEILMKGGTLPPPKGGGTPTAPATAE
                     GAATGAPLNPALKPA"
     gene            complement(1978..2961)
                     /gene="tilS"
                     /locus_tag="VFV26_03845"
     CDS             complement(1978..2961)
                     /gene="tilS"
                     /locus_tag="VFV26_03845"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX4845325.1"
                     /translation="MNRFESDLLAQIQRRGDAVTGRVLVACSGGGDSVALLVLLWTLR
                     KSLGLDLGVIHADHGLRPESPEDAAFVRQLCRALDLDLAEASLGVRAHAESHGLGLEM
                     AARDLRWDWFRQEAQQSGACAVATGHTLDDHTETVFMRLARGGGLGSLHPLAPRQGLR
                     WSPLAELRRADLRTYLAARNIPWREDASNAEPFTPRNRWRPLIETIRQEAPDLDRHLF
                     ETHLQAAEAAALAHRLIHSWEGSRWRIAEEAIAFRQEPWTEPDLRWTLEAAFRRLGWP
                     REAALLRGLAPWLLERLQHGRKPASWGNFHLNPEPGAGYLHLTQGPPPSRA"
     gene            4752..>5149
                     /locus_tag="VFV26_03850"
     CDS             4752..>5149
                     /locus_tag="VFV26_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845326.1"
                     /translation="MEDAVLAGIPLDFGPEAPWLRNVEGWRARARRVLPEVEAALHRW
                     PGNAALWRQWTGWSAFLPEPPSSLTLAEGLSIFGRRSEWKARLPVAAHKAIASEFLRK
                     RRFDEMADWFLEAWTGVLARTLHSRISPPPT"
BASE COUNT          749 a         1668 c         1834 g          898 t
ORIGIN      
        1 ggacctaggc cggcttgagg gccggattca ggggcgcgcc ggtggccgcc ccctcggcgg
       61 tggcgggggc cgtgggcgtg ccgccgccct tagggggggg cagggtgccg cccttcatga
      121 ggatctcgat gtcatcgcca tcgagggtct cgcgcaccag cagggcttcg gcgatggccc
      181 ccagctggtc gcggtgggtc tcgatggccg tcttggcgcg ggcgtagttg cgcaggacga
      241 attcctgcac ttccacatcg atgaggcggg cggtgtcctc ggagatttcg cgatgctggg
      301 cgaagtcgcg gccgaggaag acctcgtggt tgccgccgcc gccgaagttc agggggccca
      361 gtttgtcgct catgccgtac tccgtgacca tggagcgggc catctcggtg gcctgctgga
      421 tgtcgttggc cgcgccggtg ctgagctggt tgaagaagat ctcttcggcg atgcggccgc
      481 ccatggcgat ggcgatgcgg ctttccatgt agtcgcgggt ggtgttgtag cggtccgtga
      541 ccggcagctg ccaggtgacg cccagggccc ggccccgggg gatgatggtg accttgtgga
      601 ggggatcgct gtcgggcacc acggcggcga cgaccgtgtg tcccgcctcg tggtaggccg
      661 tgatgcgctt gtccgcttcg gtcatcacga ggctgcggcg ctcggcgccc atgtagacct
      721 tgtccttggc gttctcgaag tcggccatct ccacccactt cttgttgccg cgggcggcgg
      781 tgagggcggc ttcgttgcag aggttggcca ggtcggcgcc ggcgaagccg ggggtgccgc
      841 gggccaggac ttcaaggtcc acgtcgggac tgagggggat cttgtcggtg gtgtggacct
      901 tcaggatttc ctggcggccc ttcacgtcgg ggcggtccac caccacgcgg cggtcgaagc
      961 ggccggggcg gagcagggcg ggatccagca cgtccgggcg gttggtggcg gcaatgagga
     1021 tcacgccctc gttgccttcg aatccgtcca tttccaccag cagctggttc agggtctgct
     1081 cgcgctcgtc atggccgccg cccaggccgg cgccgcgatg ccggcccacg gcgtcgatct
     1141 catcgatgaa gacgatgcag ggggcgctct tcttggcctg ctcgaagagg tcgcgcacgc
     1201 ggctggcgcc cacgcccacg aacatctcca cgaagtcgga gccggagatg gagaagaact
     1261 ggaccttggc ctcgccggcg atggcgcggg ccagcagggt cttgcccgtg cccggagggc
     1321 ccatgagcag gacgcccttg gggatcttcc cgcccagctt cacgaacttg gcgggatcct
     1381 tcaggaactc gacgatctcc ttcagctctt ccttggcctc gtcgcagccg gccacatcgg
     1441 cgaaggtgat gcgcttggcg ctgctggaca gccccttggc ccgggccttt ccgaagctca
     1501 tggccttgtt gccgcccatc tgggcctggc gcatgaagac gaaccagagc accacgaaga
     1561 ccagcagggg cgcccagaac atcagcacgt aggcgaagtt gttctcgctg ggcttggcgg
     1621 cccggaactc ctcgatctgg ccctcggtct tccagctgag gatgaccttg cccaggtcct
     1681 gcatgggcgg ggccaccgtg cggaacttct cgatgacctc gcccttggca ttcttctcgg
     1741 gctgcttgta ggtgccttca acgtcgaaac cggacagggt cacggacttg tacttgcccc
     1801 ccacaccctc ggtgtagaag gtcgaaaagg ggacttcgat ctggcggttg ttctggggga
     1861 tctggcggaa ggccagcacc aagagggcga tgatgcccag ccagaccagc acgctcttca
     1921 tcatggaatt caaagggtcg ctccttgggg cgctcgccca ggtggccctc cagtgtacta
     1981 ggcccgggaa ggcggcggac cttgagttag atgcagatac cccgctccag gttcggggtt
     2041 taggtggaaa ttcccccagg atgcgggttt gcggccgtgt tggaggcgtt caagcagcca
     2101 gggcgcgagc cctctcagca gggcggcctc ccggggccag cccaggcggc ggaaggcggc
     2161 ttccagcgtc cagcgcaggt ctggttccgt ccagggttcc tgtctgaagg cgatggcctc
     2221 ctccgcgatg cgccagcgcg aaccctccca gctgtggatc agcctgtggg ccagagccgc
     2281 ggcttcggcg gcctggaggt gggtctcgaa gaggtggcgg tccagatccg gggcctcctg
     2341 ccggatggtc tcgatcagag gccgccagcg gttgcgtggc gtgaagggct ccgcgttgct
     2401 ggcatcctcc cgccatggga tgttccgggc agccaagtag gttcggaggt ccgcgcggcg
     2461 gagctccgcc aggggcgacc agcgcaggcc ctgccgggga gccaggggat ggagggaacc
     2521 gagcccgccg ccccgggcca gccgcatgaa gacggtttcc gtgtggtcgt ccagggtgtg
     2581 gccggtggcc acggcgcagg caccggactg ctgggcctcc tgccggaacc agtcccagcg
     2641 aaggtcccgg gccgccatct ccaggcccag gccgtgggat tccgcatggg cccggacgcc
     2701 cagcgaggct tccgcgaggt ccaggtccag ggcccggcag agctggcgca cgaaggccgc
     2761 gtcttccggc gactccggcc gcaggccgtg gtccgcgtgg atcacgccca ggtcgaggcc
     2821 caggctcttg cgcagcgtcc agagcagcac cagcagcgcc accgaatccc cgccgcccga
     2881 gcaggccacc agcacgcggc cggtgacagc atcaccacgg cgctggatct gcgcgaggag
     2941 gtcggactcg aatcggttca tggctccagg ctagcgcagg aaatcgggcc gtagctgcct
     3001 tgacgagagg gaccccaggc atccaggctg gggccaaggg gtctgggatg gcgtgcttga
     3061 ggcggatcat ccagagtgtg atttgcctgg gctggatgct ggccccgggt gggctgacgg
     3121 cacaaacaga ggtttggacc aggttcgtgg aggaatggcg ccggactccc agggctcccc
     3181 tgaaccttct cgcctcgaag ggactcgtca cgccggtcta tcaggcttcc gacccgctac
     3241 tcgtccagat gggcgccacg tacgacttgg ccgccgcgga cctggaaggt cccgatctgg
     3301 accttgtgcg ggcggcgcga agctgggatc tggggcccca ctggatccta ctcgatcgag
     3361 cagggaagat cctcgacgag gggagcgtcc tcccctccgg cacaaccctt cgcgaccatc
     3421 tggtggccac gggcgcaacg ccgtcctggg aggccctgga ccgtttcctg gaactgcatc
     3481 cggaccacgg cgatgcgctc cagcagcgca tggcattcgc ctgttccatg gcgaggtatc
     3541 gcctccgcgc cctccgggcc cgaggacagg ccgagggcgt ccgggtatct gatgacttcc
     3601 gatggcccgt cattgtgcct cccaaggcca aggatccgac cgccgccgca gggctggccc
     3661 gggaagtggg ggagacccta cggatgctga actcccttcc cgatgcatgg cggggagact
     3721 ggctgtggct gagggcgtgg ttggaccttc aagggtctct cgatccagac agcttccgct
     3781 cggagttggg ggttttccag gatgggatct tcgaggcctg gcggcgaagg ccccatgcgg
     3841 ggagcagttc tccattcacc gatggggcgg gatccctgag tctggccgac atctggatgg
     3901 cttgcgatag cctgtgcgat gcccgctcca gttattccaa cgcctacaac ctgaccccaa
     3961 cgccagggcg gatgtggccc tccaccgatc tgctcaacag cctctcagct ggcgccttgc
     4021 agaggggccg ggccgtggac ctcctggccc acctggatgg gttggaggcg aacccagccc
     4081 aggggatcag tccgggtgaa tgggccgcct tccggtgggt ggcctgccat tggcgcacgg
     4141 tggccctggc ccaattgggg cgctggcctg aggcctcgtc ggccgcgcaa gaagcgcgtc
     4201 ggtgggcggg accctcctgg ggaggtgtgg ctggagtgct gaggcactat ttcgggcccc
     4261 cctccagcga aaggcaggcg gagcccgtca agcctggtgg ggcgccccag tccttcctgg
     4321 atctgctggc tctgccgccc ttggatccac cgtctacgcc tgcaccgaag ccgcttcgat
     4381 tcctggtctg gggccgcccc tcctgggcgg aacgctggaa ggctctccgg cacaccccgc
     4441 ctctcggcga ttggggcccg gatgaactga gggatgaagc gccgaccgaa acagatgagg
     4501 cctatctcca gaggctgggg tccccggcgg cgggatgggc ggtattccgc gggacgacgg
     4561 aactcatcgt ccggggcgac gggccgcccg atccgcgtgc cttcgccctc caactggcgg
     4621 cagtggcacc atcccgcctc caggtgctgg atgctttcct ccgtcgacat ccagatcacc
     4681 ttgacgcccg gcgggaacga ttcgacctgc tgcggccccg gatgccacgg ccggagttcg
     4741 aagagcggct gatggaggat gccgtgctgg cagggattcc cttggacttc ggcccggagg
     4801 cgccctggct ccggaatgtg gaaggttggc gggcccgcgc gcgtcgcgtg cttccggagg
     4861 tggaggctgc gctccatcgc tggcccggga atgcggctct ttggcgtcag tggacgggtt
     4921 ggtctgcatt cctccccgag ccaccctcat cgctcacttt ggccgagggc ctctccatct
     4981 ttggccgccg ctcggaatgg aaggcccgac tgcccgtggc ggcgcacaag gccatcgcct
     5041 cggagttcct gcggaagcgg cgtttcgacg agatggccga ctggttcctg gaggcatgga
     5101 cgggggttct ggcgcggacc ctccactcca gaatcagccc gccgccgac
//
LOCUS       DASUDT010000184         3171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2196378, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000184 DASUDT010000000
VERSION     DASUDT010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2196378"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VFV26_03855"
     CDS             complement(<1..1025)
                     /locus_tag="VFV26_03855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CofH family radical SAM protein"
                     /protein_id="HEX4845327.1"
                     /translation="MLSLHSKIRDARLLPLADKVLRGERLSFDDGLLLYESPDLTGIG
                     AMAHHVRLQKHGRAAYYVKSRRLSYTNVCYTHCQFCAFQAKPGDPRAYALSAEQIIAE
                     LEKPENAGVRELHMTSGHNPKLKIDYFEDLFTKIKARFPSIHLKVFTMIEMDYYARIS
                     GLSTDAFLDRCMAAGLESCPGGGAEIFDEALREQICIGKKDAQVWLDTAELCHRKGLP
                     TNCTMLYGHIEGAKHRVDHLLRLRDLQDRSRAAGYTGFLAFIPLAYQNEDNELSATHV
                     IHETTGTQDLREIAVARLLLDNIPHIKAYWVMISPGLAQVALSYGADDVDGTVIAEEI
                     AHDAGAKT"
     gene            complement(1206..2222)
                     /locus_tag="VFV26_03860"
     CDS             complement(1206..2222)
                     /locus_tag="VFV26_03860"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF003652.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEX4845328.1"
                     /translation="MDLYRALRPLIFRLDPETAHNLAFWLGERACAWPRLPEPEVAPI
                     LRRGAFGLDFPTPLGLAAGLDKGATLLPLWKALGFGHVEIGTVTPRPQPGNPKPRLFR
                     FPEAGLILNRMGFNSEGAEVVAARLRNRPAGLIVGGNLGKNKETPEAQALDDYRAAYR
                     LIAPRVDYIALNVSSPNTPGLRNLQAPEALKPLLAGMLDLRKELGLERQPLLLKLAPD
                     LAPEDLDAIVEVAVASGISGLIATNTTLDRGVVAESLRLLVESKGAGGLSGEPLKAKA
                     REVRKRILAALRGRLPLVACGGLGSAEDVQGALDDGAALAQIYSALIFEGPALIARIH
                     KGLI"
     gene            complement(2222..2581)
                     /locus_tag="VFV26_03865"
     CDS             complement(2222..2581)
                     /locus_tag="VFV26_03865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845329.1"
                     /translation="MTPRLLSFSSALLLALACQAPGGTVPAKPAEPFVPSLSLRPLSV
                     TLHRGATQTFQAEINYPEGVRYMRQPVGWRVVEPEGGTINGAGLYTAPAAAGTYHVEV
                     RREDFPEITATATVTVK"
     gene            complement(2589..>3171)
                     /locus_tag="VFV26_03870"
     CDS             complement(2589..>3171)
                     /locus_tag="VFV26_03870"
                     /inference="COORDINATES: protein motif:HMM:TIGR02428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX4845330.1"
                     /translation="IPTLIANEIPAGMEVVLQSENGLLGIGPFPTAEEVDADLINAGK
                     QTVTAAPGASFFSSADSFAMIRGGKIDLSILGAMQVDMEGNLANWMIPGKMVKGMGGA
                     MDLVAAARRVVVVMEHTSKEGEFKILRRCNLPLTGQRCVHRIITDLAVIDVVPGREGL
                     RLVETAPGVTREEVQAQTEPPLVMDCVTEMTGF"
BASE COUNT          478 a          975 c         1165 g          553 t
ORIGIN      
        1 gtcttggcgc cggcgtcgtg cgcgatctcc tcggcgatga cggtgccgtc cacgtcgtcg
       61 gcgccgtagc tgagggcgac ctgggccagg cccggcgaga tcatgaccca gtaggccttg
      121 atgtgcggga tgttgtcgag cagcaggcgc gccacggcga tctcccgcag atcctgggtg
      181 cccgtggtct cgtggatgac gtgggtggcg ctcagctcgt tgtcctcgtt ctggtaggcg
      241 agggggatga aggccaggaa gccggtgtag cccgcggccc gggagcggtc ctgcaggtcc
      301 cgcagccgca gcaggtggtc cacccggtgt ttcgccccct cgatgtggcc gtagagcatg
      361 gtgcagttgg tgggcagccc cttgcggtgg cagagttcgg cggtatcaag ccagacctgg
      421 gcgtccttct tgccgatgca gatctgctcg cgcagggcct cgtcgaagat ctcggcgccg
      481 ccgccggggc agctctccag gcccgcggcc atgcagcggt cgaggaaggc atcggtggac
      541 aggcccgaga tgcgtgcgta gtagtccatc tcgatcatgg tgaagacctt gaggtggatg
      601 gacgggaagc gcgccttgat cttggtgaac aggtcttcga agtagtcgat cttcagcttc
      661 gggttgtggc ccgaggtcat gtgcagttcg cggacgcccg cgttctcggg cttctccagt
      721 tccgcgatga tctgttcggc cgagagtgcg taggcccggg ggtccccggg cttggcctgg
      781 aaggcgcaga actggcagtg ggtgtagcag acgttggtgt aggagagccg gcggctcttg
      841 acgtagtagg cggcgcggcc atgcttctgg agccgcacat ggtgggccat ggcgccgatg
      901 cccgtgaggt cggggctttc atagagcagc aggccgtcgt cgaagctcag gcgctccccg
      961 cgcagcacct tgtccgccag gggcagcagg cgcgcatcgc ggatctttga atggagtgac
     1021 aacatcgata cctcggcctt ttagtgtagc gtcgcagggt tgaatcgatt gttcttgaga
     1081 aaggaatata tggaagcgga ggacagctga gtggccaagg aaagcagaga aaggacaagg
     1141 cttgtctccg ctcacctccg ctcttcagct ttcctccgct tatcaaattc cgtctgcttt
     1201 tcaggctata tcaggccttt atggatgcgg gcgatgagtg ccggcccctc gaagatcagg
     1261 gcgctgtaga tctgggccag ggctgcgccg tcatcgaggg cgccctgcac atcctccgcc
     1321 gagcccaggc cgccgcaggc caccaggggc aggcgcccgc ggagggcggc caggatgcgc
     1381 ttccgcacct cgcgggcctt ggccttcagg ggttcgccac tgaggccgcc ggcgcccttg
     1441 gattccacga ggagccgaag ggattccgcc accacgccgc gatccagcgt cgtattggtg
     1501 gcgatgaggc ccgagatgcc ggaggccacg gccacttcca cgatggcatc gaggtcctcg
     1561 ggggccagat ccggcgccag cttgagcagg aggggctggc gctccaggcc cagctccttc
     1621 cgcaggtcga gcatgcccgc cagcagcggc ttcagggcct cgggagcctg gaggttgcgc
     1681 aatcccggcg tgttgggact gctcacgttg agggcgatgt agtcgacgcg gggcgcgatg
     1741 aggcggtagg cggcgcggta gtcgtccagg gcctgggctt cgggcgtctc cttgttcttg
     1801 cccaggttgc ctcccacgat gaggcccgcg gggcggttcc ggaggcgggc ggcgacgact
     1861 tcggcgcctt cgctgttgaa gcccatgcgg ttgaggatca gaccggcctc ggggaagcgg
     1921 aacaggcggg gcttcggatt gccaggctgc gggcgcggtg tgaccgtgcc gatctccaca
     1981 tggccgaagc ccagggcttt ccaaagaggc aacagcgtgg cgcccttgtc gagcccggcg
     2041 gccagcccca ggggcgtggg gaagtccagg ccgaaggccc cacggcgcag gatgggggcc
     2101 acctcgggct ccggcaatcg gggccaggcg caggcccgtt cccccagcca gaaggccagg
     2161 ttgtgggcgg tttcggggtc gaggcggaag atcagggggc gcagggcccg gtacagatcc
     2221 atcacttcac cgtgacggtg gccgtggcgg tgatctcggg gaaatcctcc cggcgcactt
     2281 cgacatggta ggtgccagcc gccgccgggg ccgtgtagag gccggctcca ttgatggtgc
     2341 cgccttcggg ctcgaccacc cgccagccca cgggctggcg catgtagcgc acgccctcgg
     2401 gatagttgat ctccgcctgg aaggtctgcg tggcgccccg gtggagggtg acggagaggg
     2461 ggcggaggct cagggagggc acgaagggtt cagcgggctt ggcaggcacg gtgcctccag
     2521 gggcctgaca ggccagggcg agcaggaggg cggaagagaa gctgagcagg cggggggtca
     2581 tggtcacctc agaatccggt catctcggtc acgcaatcca tcacgagcgg gggctcggtc
     2641 tgcgcctgga cctcctcgcg ggtgacgccc ggcgccgtct ccaccaggcg aaggccctcc
     2701 cggcccggca ccacgtcgat gacggccagg tcggtgatga tgcggtgcac gcagcgctgg
     2761 cccgtgaggg gcaggttgca cctgcggagg atcttgaact cgccctcctt gctggtgtgc
     2821 tccatgacca ccaccacccg cctggccgcg gccaccaggt ccatggcgcc gcccatgccc
     2881 ttgaccatct tgccggggat catccagttg gcgaggttgc cttccatgtc cacttgcatg
     2941 gcgccgagga tgctgaggtc gatcttgccg ccgcggatca tggcgaagct gtcggcgctg
     3001 ctgaagaagc tggcgccggg cgccgccgtc accgtctgct tgcctgcgtt gatgaggtcc
     3061 gcatccacct cttccgccgt ggggaagggg ccgatgccca gcaggccgtt ctcgctctgg
     3121 aggaccacct ccatgcccgc ggggatctca ttggcgatga gggtggggat g
//
LOCUS       DASUDT010000185         2134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_627855, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000185 DASUDT010000000
VERSION     DASUDT010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627855"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..1255)
                     /locus_tag="VFV26_03875"
     CDS             complement(137..1255)
                     /locus_tag="VFV26_03875"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HEX4845331.1"
                     /translation="MSQFNIAWLPGDGVGVEVMEAAKICLDALKFDAKYTHGDIGWEF
                     WCKEGESFPQRTIDLLKSSHAAMFGAITSKPVKDAEAELVPELKGKGLIYRSPIVRMR
                     QMFDLYTCLRPCKAYAGNPLNYKEGIDMVVFRENTEDLYAGVEFSPVPDELKATLKKL
                     SKPFGHFADIPGDEFAITCKVNTQKGCDRIIRAAFEYAKTFGYPKVTVIHKANVVRAT
                     EGMFLETGKRIAKEYPGIEMDDANVDAITMWMLKNPKNYGVMVATNLFGDIISDLAAQ
                     MVGGLGFGCSGNIGEKLAVFEPSHGSAPKYAGQYKVNPIATILAAKMMLDWLGETEKG
                     TRLEKAVAAVIAEGQVRTYDMGGSASTLEMGEAIAKKL"
     gene            complement(1389..>2134)
                     /locus_tag="VFV26_03880"
     CDS             complement(1389..>2134)
                     /locus_tag="VFV26_03880"
                     /inference="COORDINATES: protein motif:HMM:NF012688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEX4845332.1"
                     /translation="EGRQIRGAFVPREGWVLLDADYSQIELRVVAALAEDPVLLGAFA
                     AGEDIHRRTASEVFNVPMDQVTSDQRSASKAVNFGLLYGQGAFALAANIGVSQKEAKA
                     FIERYFERMPKVAAWIENAKERALAEGLVRTHWGRIRRIPELESPNKQFQAQGLREAV
                     NTIVQGTAADLMRRAMVRLHRSLQASGLRARLLLQVHDELLMEAPPEEVERASALLKE
                     AMEGADDLGALGVKLAAEVRTGASWLACK"
BASE COUNT          333 a          692 c          679 g          430 t
ORIGIN      
        1 ccgacttcgt ggatgaggat ctggttcatg aaaagcctca aaatctatcc acagattcca
       61 ccgatttcac agattaagaa ctcaggtggc gacgtctttc ctctgtgtga atctgtgaaa
      121 tctgcggacc atttctttag agcttcttgg caatggcctc gcccatctcg agcgtggagg
      181 cgctgccgcc catgtcgtag gtgcggacct ggccctcggc gatgacagcg gccacggcct
      241 tttcgaggcg ggtgcccttt tcggtctcgc ccagccagtc cagcatcatc ttggcggcca
      301 ggatggtggc gatggggttc accttgtact ggcccgcgta cttgggcgcg ctgccgtggc
      361 tgggttcgaa gacggccagc ttctcgccga tgttcccgct gcagccgaaa cccaggccgc
      421 ccaccatctg ggccgccagg tcgctgatga tgtcgccgaa gaggttggtg gccaccatca
      481 cgccgtagtt cttggggttc ttcagcatcc acatggtgat ggcgtccacg ttggcgtcgt
      541 ccatctcgat gccggggtat tccttcgcga tgcgcttgcc ggtctccagg aacatgccct
      601 cggtggcgcg caccacgttg gccttgtgga tgaccgtgac cttgggatag ccgaatgtct
      661 tcgcgtattc gaaggcggcg cggatgatgc ggtcacagcc cttctgggtg ttcaccttgc
      721 aggtgatggc gaactcgtca ccgggaatgt cggcgaaatg cccgaagggc ttgctgagct
      781 tcttcagggt cgccttgagc tcatcgggta ccggactgaa ttcgacgccc gcatagagat
      841 cctcggtgtt ctcacggaac accaccatgt cgatgccttc cttgtagttc agggggttgc
      901 ccgcataggc cttgcagggc cgcaggcagg tgtagaggtc gaacatctgg cgcatgcgga
      961 cgatggggct gcggtagatg agcccctttc ccttcagctc gggcaccagc tccgcctcgg
     1021 cgtctttcac gggcttggag gtgatggcgc cgaacatggc ggcgtggctg ctcttcagca
     1081 ggtcgatggt gcgctggggg aaggactcgc cctccttgca ccagaactcc cagccgatgt
     1141 cgccgtgggt gtacttcgca tcgaacttca gggcatcgag gcagatcttc gccgcctcca
     1201 tgacttccac gcccacgcca tctccgggca accacgcgat gttgaactgg ctcatgatca
     1261 ggctccttcg caggggtctg cggtagggcc caatcatgac ctccccgtta agttcgggcc
     1321 cgggcggtca tcacaaatcc ctccgaaaac gcccgtttca ggtctccgga cctacagatc
     1381 gtcaaaaact acttgcaggc cagccagctg gcgccggtgc ggacttccgc cgccagcttc
     1441 acgcccaggg cccccaggtc atcggcacct tccatggcct ccttcagcag ggccgaggcg
     1501 cgttccacct cctccggcgg cgcctccatg agcagctcgt cgtggacctg gagcagcagt
     1561 cgcgcccgga ggcccgaggc ctggaggctg cggtgcagac gcaccatggc ccggcgcatg
     1621 aggtccgcgg cggtgccctg cacgatggtg ttcacggcct cgcgcaggcc ctgggcctgg
     1681 aactgcttgt tggggctctc cagctcggga atgcggcgga tgcggcccca gtgcgtgcgt
     1741 accaggcctt cggccagggc ccgctccttg gcgttctcga tccaggccgc caccttgggc
     1801 atgcgctcga agtagcgctc gatgaaggcc ttggcctcct tctggctgac gccgatgttg
     1861 gcggcgaggg cgaaggcccc ctggccgtag agcaggccga agttgacggc cttggaggcg
     1921 ctgcgctgat ccgaggtgac ctggtccatg ggcacgttga agacttccga ggccgtccgc
     1981 cggtggatgt cctcgccggc ggcgaaggcg cccagcagca cgggatcttc ggccagggcc
     2041 gccaccacgc gcagctcgat ctggctgtag tccgcgtcca gcagcaccca gccttccctc
     2101 ggcacgaagg ccccgcggat ctggcggccc tcct
//
LOCUS       DASUDT010000186         3685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_473327, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000186 DASUDT010000000
VERSION     DASUDT010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473327"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1406)
                     /gene="murD"
                     /locus_tag="VFV26_03885"
     CDS             complement(78..1406)
                     /gene="murD"
                     /locus_tag="VFV26_03885"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEX4845333.1"
                     /translation="MRTVVMGAGRSGLAAARFLAAQGQAVVLTDSRPDPGAALELDLA
                     KAGLPGIWGSHPFSLLEGCGELVLSPGIPRTAPFVAEALSRGIPAIGEVELAHRILRA
                     RGDGGRVLAVTGTNGKSTTTDLVAHLLRVSGLPSAACGNLGTPVIEAVAAGVPATVYV
                     VELSSYQLESVADFHAEGAAFLNLTPDHLARHGTLEAYRQAKLRIFERQDAVDLRVVP
                     AAHPGWWQDAPGAGRDARFGWTPCDAWCDGEGLLHLHGEPLLHRSELRIPGDHNVENA
                     LAAALLARHGGAAVEAIRDGLRSYPGLAHRIAFCGEKGGVRAYNDSKGTNVDATLTAI
                     RALPGPLVLLLGGTDKGASYGPLREALDGKLRRLVFLGEAIPQLTRDLGDLPHEVVPA
                     FDEAVGAALSLAQSGDQVVLSPACASFDQFDNFEQRGARFEALVRAWAHA"
     gene            1509..2273
                     /locus_tag="VFV26_03890"
     CDS             1509..2273
                     /locus_tag="VFV26_03890"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4845334.1"
                     /translation="MPKGILENLLSGEGAILPHVQPMYRLQDNRLVAQEYLTRHLDAA
                     GMAHPVGPILQDPALALRDRLTLDLRFLEATFKVLAQRGTGDILHFVNLEPVSLEAPG
                     FWNCLPRWIADLPFPTECVVMEFTESQGMHDLEALQSYAKQLRDLGLRVAVDDLGAGV
                     ASLTHMARLAPDFIKADRSLVEQVHRRPYQAALLNALSHFAQRMRVGFIAEGIETLEE
                     LEAVMDADVPWGQGYILGQPWPTRPKPIRPIAASES"
     gene            complement(2251..3339)
                     /gene="mraY"
                     /locus_tag="VFV26_03895"
     CDS             complement(2251..3339)
                     /gene="mraY"
                     /locus_tag="VFV26_03895"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX4845335.1"
                     /translation="MLPWLLYPFRDVVPGFSVFRYVTFRTAMAAATAMILSLLLGPWL
                     IRTLTALKMGQHIRGAGPEHHQKKAGTPTMGGLLILTVITVSTLLWCDLKSGAIWVAL
                     MALLGFGTVGAFDDAQKLLKKQNLGLTSWQKMALLTAISLLVAWLILHFGLRGSATSQ
                     LSVPFFKNFRPDVGVLLIPWIWLVMVGTSNAVNLTDGLDGLATGGTLIVSITYAILAY
                     AVGHAKIASYLAVPFVPGGAELSVFMGAMAGACLGFLWFNAHPAEVFMGDTGSLGLGG
                     ALGTVAVIIKQEVLLVIAGGLFVVEAVSVILQVGSFKLRGGKRIFRMAPFHHHLELGG
                     LQETKVVIRMWITAIVCSILALSSLKLR"
     gene            complement(3368..>3685)
                     /locus_tag="VFV26_03900"
     CDS             complement(3368..>3685)
                     /locus_tag="VFV26_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845336.1"
                     /translation="LLQLPGGEAVAVLGSMRELGPEASRIHRETGAALKTLGLARLWA
                     FGDFAGDYADGFGQRAVAFPDFEALRDDAAGLSAIPAGARILVKGSRYWRAERAADWL
                     LTH"
BASE COUNT          609 a         1326 c         1245 g          505 t
ORIGIN      
        1 cccccggacc cccgcgaaga agcccggcaa agccgggctt cttcttttag ccgtaccatt
       61 gagcgggagc ggatggatca ggcgtgcgcc caggcgcgga ccagggcttc gaagcgcgcg
      121 ccgcgctgct cgaagttgtc gaactgatcg aagctggcgc aggcggggct cagcaccacc
      181 tggtccccgg actgcgccag ggacagggcg gctcccacgg cctcgtcgaa ggcgggcacc
      241 acctcgtgcg ggagatcgcc cagatcgcgg gtcaactggg gaatggcctc gcccaggaag
      301 accaggcgcc ggagcttgcc gtccagggcc tcgcgcaggg gcccgtagct ggcgcccttg
      361 tccgtgccgc ccagcaggag caccaggggc cccggcagcg ccctgatggc cgtgagggtg
      421 gcatccacat tcgtgccctt ggaatcgttg taggcgcgca cgccgccctt ctcgccgcag
      481 aaggcgatgc ggtgggccag gcccggatag ctgcgcagcc cgtcgcggat ggcctccacc
      541 gccgccccgc cgtgccgggc cagcagggcc gccgccaggg cgttctccac gttgtggtcc
      601 cccgggatgc gcagctcgct gcgatggagc agcggttccc catgcaggtg cagaagcccc
      661 tcgccatcgc accaggcatc acagggggtc cagccgaagc gggcgtcccg cccggcgccc
      721 ggggcgtcct gccaccagcc gggatgggcc gccggcacca cgcggagatc caccgcgtcc
      781 tgccgttcga agatgcgcag cttggcctgc cggtaggcct ccagcgtgcc atggcgggcc
      841 aggtggtccg gcgtgaggtt caggaaggcg gccccttccg catggaagtc cgccacggac
      901 tccagctggt agctgctcag ctccacgacg tacaccgtgg cgggaacgcc ggcggccacg
      961 gcctcgatga cgggcgtgcc caggttgccg caggcggcgg aaggaagacc cgaaacccgc
     1021 agcagatggg ccaccagatc cgtggtggtg ctcttgccgt tggtgccggt cacggccagc
     1081 acccggcctc catctccgcg ggcccgcagg atgcgatggg ccagctccac ttcgccgatg
     1141 gcggggatgc cccgggacag ggcctccgcc acgaaagggg ccgtgcgggg aatgccgggg
     1201 ctgaggacga gctcgccaca accctccagc agggagaaag gatggctgcc ccagatgccg
     1261 ggaaggcccg ccttcgccag atccagctcc agcgcggctc cggggtcggg acggctgtcc
     1321 gtcagcacga cggcctgtcc ctgtgccgcc aggaaccggg ccgccgccag ccccgaacgt
     1381 cccgctccca tgaccacggt gcgcatgtcg ccccctggaa tccagcgtaa cccggcccgc
     1441 cgcttcctgc atgcagacgc acgccgcgct acactgagcc tagaaccctt gaacgatgcg
     1501 gagtccccat gcccaagggc atcctggaaa acctgttgag cggtgaaggc gccatcctgc
     1561 cgcacgtgca gcccatgtac cggctccagg acaaccgcct ggtggcgcag gagtacctga
     1621 cccggcacct ggacgcggcg gggatggccc accccgtggg cccgattctc caggatccag
     1681 ccctggccct ccgcgaccgg ctcaccctgg acctccgctt cctcgaggcc accttcaagg
     1741 tcctggccca gcgggggacc ggcgacatcc tgcacttcgt caacctcgaa cccgtgagcc
     1801 tggaggcgcc gggcttctgg aactgcctgc cccgctggat cgcggacctg cccttcccca
     1861 ccgaatgcgt cgtcatggag ttcaccgaat cccagggcat gcacgacctc gaggccctcc
     1921 agtcctacgc caagcagctg cgcgacctcg ggctgcgggt ggccgtggac gacctgggcg
     1981 caggcgtggc gagcctcacc cacatggcgc ggctggctcc ggatttcatc aaggccgacc
     2041 gcagcctcgt ggagcaggta caccgccgcc cctaccaggc cgccctgctc aatgccctct
     2101 cccacttcgc ccagcgcatg cgcgtgggtt tcatcgccga aggcatcgag accctggagg
     2161 agctggaggc ggtcatggac gcggatgtgc cctggggcca gggctacatc ctgggccagc
     2221 cctggcccac ccggcccaaa cccatcaggc ctatcgcagc ttcagagagc tgagggccag
     2281 gatcgagcag acgatggccg tgatccacat gcggatcacc accttggtct cctggagccc
     2341 ccccagttcc agatggtggt ggaagggcgc catgcggaag atgcgcttgc cgccgcgcag
     2401 cttgaagctg cccacctgca ggatcacgct caccgcctcc accacgaaga gcccgcccgc
     2461 gatcaccagc agcacctcct gcttgatgat gacggccacc gtgcccagcg ccccgcccag
     2521 tcccagggag cccgtgtcgc ccatgaagac ttccgccgga tgggcgttga accagaggaa
     2581 gcccaggcag gcccccgcca tggcgcccat gaacacggac agctccgcgc cgccgggcac
     2641 gaagggcacc gccagatagc tggcaatctt cgcgtggccc accgcgtagg ccaggatggc
     2701 gtaggtgatg gatacgatga gcgtgccgcc ggtggccagg ccgtccaggc cgtccgtgag
     2761 gttcacggcg ttgctggtgc ccaccatcac cagccagatc caggggatga gcagcacgcc
     2821 cacatcgggg cggaagttct tgaagaaggg cacggacagc tggctggtgg cgctgccgcg
     2881 caggccgaaa tgcaggatga gccaggccac cagcagcgag atggccgtca gcagggccat
     2941 cttctgccag ctcgtgaggc ccaggttctg cttcttgagc agcttctgcg catcgtcgaa
     3001 ggcgccgacg gtgccgaagc ccagcagggc catcagggcc acccagatgg ccccgctctt
     3061 gagatcgcac cacagcaggg tcgagacggt gatcaccgtg aggatgagga gtccgcccat
     3121 ggtgggcgtg cccgccttct tctggtggtg ttccggcccg gcgccgcgga tgtgctggcc
     3181 catcttcagg gccgtcagcg tgcggatcag ccaggggccc agcagcaggc tcaggatcat
     3241 ggccgtggcc gccgccatgg ccgtgcggaa ggtgacgtag cggaacaccg agaacccggg
     3301 caccacgtcg cgaaagggat agagaagcca gggcagcatg ggaagtccgg ggtctggagt
     3361 ctggaggtca gtgggtgaga agccagtccg ccgcgcgctc cgcgcgccag taccggctgc
     3421 ccttcaccag gatacgggct cccgcgggga ttgcggagag tcccgcggca tcgtcgcgca
     3481 gggcctcgaa gtccgggaag gccacggcac gctggccgaa gccatccgca tagtcccccg
     3541 cgaaatctcc gaaagcccag agccgcgcca ggcccagcgt cttcagcgcc gcgccggtct
     3601 cccggtggat ccgggaggcc tccggtccca gttcccgcat ggagcccagg accgccaccg
     3661 cctcgccgcc gggcagctgc agcag
//
LOCUS       DASUDT010000187         2816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1113878, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000187 DASUDT010000000
VERSION     DASUDT010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113878"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VFV26_03905"
     CDS             complement(<1..430)
                     /locus_tag="VFV26_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845337.1"
                     /translation="MRSLSLANPLLAITLCFLAVHCGRKGDPVPRPRAAAQAMEARLE
                     GLRQVRLVLPAADVTGDSLVGVEVVRVLYLPLELAKPTPQDVFSRGEVVLERRRPDLP
                     GPGETLLMDLKSLQRPQGWIVVVAVRLGNVAGRPSEVMPWM"
     gene            662..2155
                     /gene="accC"
                     /locus_tag="VFV26_03910"
     CDS             662..2155
                     /gene="accC"
                     /locus_tag="VFV26_03910"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: protein motif:HMM:NF006367.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX4845338.1"
                     /translation="MPVTKILIANRGEIAVRVIRTCREMGIPTVAVYSEADRGALHVR
                     MADEAYCIGPAAARESYLVLEKILDVCKRSGADAVHPGYGFLSENAEAARAFEAAGIT
                     FIGPRPECIVSMGSKTAAREVAIAAGCPVVPGIQETMADEELLVASRKIGFPVMLKAA
                     MGGGGKGMRLVHKPEEFTSSLARARGEALSSFGDDSVYVEKAIVQPRHIEIQVFSDQH
                     GNHVYLHERECSVQRRHQKVIEEAPSPHVTPEMRRAMGEAALKVARAVNYVGAGTVEF
                     LADADRNFYFLEMNTRLQVEHPVTEWITGLDLVKWQILVARGEKLPMAQEEIPLNGWA
                     MECRVYAEDPDKNFMPSPGKITFLRTPSGRNVRDDGGVYEGAEVPMFYDPMISKLSTW
                     GPTRLEAIERMRAALGEYRIGGIRHNIAFHEALMEHGPFREGALHTGMLDKPFWKKKE
                     QGPDLKFAVAAALLHELETEQRRAAQPAAGADGKPDAWKHWGRFNRL"
     gene            2166..2687
                     /locus_tag="VFV26_03915"
     CDS             2166..2687
                     /locus_tag="VFV26_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX4845339.1"
                     /translation="MKRTLIVGKESHDVELLHQDGVTTLVWEGQSHPIDILELEPGCY
                     SILMGGRSVEVRLDAAKAPDAETHAYRAMLYDGAYEFALVDPRRALLAGAGGPGAGGG
                     LLSSPMPGKIVKLLVKPGDTVQEGQTLLVMEAMKMQNELKTTTAGTVTIVHVQEGATV
                     ETGAALITVAPEA"
BASE COUNT          527 a          924 c          973 g          392 t
ORIGIN      
        1 ccatccaggg catcacctcg ctggggcgcc ccgccacgtt gccgaggcgc acggccacga
       61 cgacgatcca gccctggggc cgctgcaggg atttcaggtc catgaggagt gtctcaccgg
      121 ggcccggaag gtccgggcgg cggcgctcca gcaccacctc gccccggctg aagacgtcct
      181 ggggagtggg tttggccagt tccaggggga ggtagaggac ccgcaccacc tcgacgccca
      241 cgagggaatc gcccgtcaca tccgccgcag gcaggaccag ccggacctgg cggaggcctt
      301 cgaggcgggc ttccatggcc tgggccgcgg cccggggccg cgggacgggg tcgcccttcc
      361 gcccgcagtg gactgccagg aagcagagcg tgatggcaag cagcgggttt gctaggctga
      421 gggatcgcat cgccatccat catgcccgat tccgaggtcc gtccatgcct gtgaccaaga
      481 tcctgatcgc aaaccgaggc gaaatcgcgg tccgcgtgat ccgcacctgc cgcgagatgc
      541 gaggtcccct ccgcgatccc gtgaagcggg gagcgggagc gaagcgatcg gggaccggca
      601 tctcgccccg ggcgtgaccg ggacgacggc ccaggaagaa ttaggaagga aggatgacaa
      661 catgcctgtg accaagatcc tgatcgcaaa ccgaggcgaa atcgcggtcc gcgtgatccg
      721 cacctgccgc gagatgggca ttcccacggt ggcggtctat tcggaggccg accgcggagc
      781 gctgcacgtg cgcatggcgg acgaggccta ctgcatcggc cccgccgcgg cccgggagag
      841 ctacctggtg ctggagaaga tcctggatgt ctgcaagcgc agcggcgccg atgcggtgca
      901 cccgggctac gggttccttt cggagaacgc cgaggcggcg cgggccttcg aggccgccgg
      961 catcaccttc atcgggcccc gccccgagtg cattgtgagc atgggctcca agaccgccgc
     1021 ccgcgaggtg gccatcgccg cgggctgccc cgtggtgccg ggcatccagg agaccatggc
     1081 cgacgaggaa ctgctcgtcg cctcccggaa gatcggcttc cccgtgatgc tcaaggccgc
     1141 catgggtggc ggcggcaagg gcatgcgcct ggtccacaag cccgaggagt tcacctcgtc
     1201 gctggcccgg gcccggggcg aggcgctgtc cagcttcggc gacgacagcg tgtacgtgga
     1261 gaaggccatc gtccagccgc ggcacatcga gatccaggtg ttctcggatc agcacggcaa
     1321 tcatgtctac ctccatgagc gggaatgctc ggtgcagcgc cggcaccaga aagtgattga
     1381 agaagcgccc agcccgcacg tcaccccgga gatgcgccgg gccatgggcg aagcggcctt
     1441 gaaggtggcc cgggcggtga actacgtggg cgccggcacc gtggagttcc tggcggacgc
     1501 ggaccggaac ttctacttcc tggagatgaa cacccgcctc caggtggagc atcccgtcac
     1561 ggaatggatc acgggactcg atctggtgaa gtggcagatc ctcgtggccc ggggcgagaa
     1621 gctgcccatg gcccaggagg agatccccct gaacggctgg gccatggaat gccgcgtcta
     1681 cgcggaagat ccggacaaga acttcatgcc cagccccggg aagatcacct tcctgcgcac
     1741 gcccagcgga cgcaatgtgc gggacgacgg cggggtgtac gagggggcgg aggtgcccat
     1801 gttctacgac cccatgattt cgaaactgag cacctggggc cccacacgcc tggaggccat
     1861 cgagcgcatg cgggcggccc tgggcgagta ccgcatcggg ggcatccggc acaacatcgc
     1921 cttccacgaa gccctgatgg agcacggacc cttccgcgaa ggggccctgc acacgggcat
     1981 gctcgacaaa cccttctgga agaagaagga gcaggggccc gacctgaagt ttgccgtggc
     2041 cgcggccctg ctgcatgaac tcgagaccga gcagcgccgc gccgcccagc ccgcggccgg
     2101 cgccgacggg aagcccgatg cctggaaaca ctggggccgg ttcaaccggc tgtagggaga
     2161 ctctggtgaa acgcaccctg atcgtcggca aggaatccca tgacgtggaa ctgctccacc
     2221 aggacggcgt gaccacgctg gtctgggagg gccagagcca tcccatcgac atcctggagc
     2281 tagagccggg ctgctactcc atcctcatgg ggggccgttc cgtggaggtg cgcctggacg
     2341 cggccaaggc cccggacgcg gaaacccacg cctaccgcgc catgctctat gacggcgcct
     2401 acgaattcgc cctggtggac ccccgccgcg ccctgctggc cggggccggc gggcccggcg
     2461 ccggaggagg cctgctgtcc tctcccatgc cgggcaagat cgtgaagctc ctcgtgaagc
     2521 ccggcgacac cgtccaggag ggccagaccc tcctcgtgat ggaggcgatg aagatgcaga
     2581 acgagctgaa gaccaccacg gccggaaccg tgacgatcgt gcacgtccag gagggcgcca
     2641 ccgtggagac gggagcggcg ctcatcaccg tagcgcccga ggcctgaaca aaggggttgc
     2701 gtaaaacccg gtggacagcc cagagagacg aaaaacgccg tatgctaccc taggtctaat
     2761 agaaaatcca agatatagat tgcccttgag ttgtaaggat ctgaaggcta tcagcg
//
LOCUS       DASUDT010000188         4279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_340585, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000188 DASUDT010000000
VERSION     DASUDT010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4279
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340585"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VFV26_03920"
     CDS             <1..489
                     /locus_tag="VFV26_03920"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF013398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEX4845340.1"
                     /translation="GQDPAAPELRDTPARVAEFWAERLAGYGVDLAAELKPLPGELSP
                     VPVILERIPFVSTCEHHLAPFEGHATIGYLPGAGGTVGLSKLVRVVQAYAWRLQVQER
                     MAQQIADALQAHLRPAAWGVQLVAIHTCMGHRGVKTPGVPVRTTLMGGSWEAAPPAPF
                     RG"
     gene            510..1553
                     /locus_tag="VFV26_03925"
     CDS             510..1553
                     /locus_tag="VFV26_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845341.1"
                     /translation="MAIPRTPFLAAAQARRILRLGIWGLLGWLWFQIQRLRAPRPDPR
                     PAATLGEAFLQGANLPWFSCGNDFGGNAWHPEGGISAPGRIQAVQRAFAAMERDGITC
                     LRWFLFADGRSGILADPTGRPAGLDDRVFPDLDLAFHLASRHGIRILPVCFDFLLCAP
                     PQWANGVQLGGRSRWFQDPEAWAILETRVLTPLFTRYGNHPALLAWDLFNEPEWAAFG
                     MGWEEAGIAPWVLRSRLERMVQLAHRQGNRPVTVGLGTARGLPLVRGLGLDVFQIHWY
                     DRHEAASPLDRPVEQLRLDRPLLLGEFPTRNSRRSRAEILETARRNGYCGALAWSIRA
                     GDAFSGMGPGAED"
     gene            complement(1554..1877)
                     /locus_tag="VFV26_03930"
     CDS             complement(1554..1877)
                     /locus_tag="VFV26_03930"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4845342.1"
                     /translation="MPVPLREAAPLFAALGDGTRLQLLARLGSGGPHSITGLSRASAL
                     SRQAITKHLGVLAGAGLVRSRRQGRECIWELEPGRLDDAHRYLEGLSRQWDEALDRLK
                     AFVEG"
     gene            complement(1894..2352)
                     /locus_tag="VFV26_03935"
     CDS             complement(1894..2352)
                     /locus_tag="VFV26_03935"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX4845343.1"
                     /translation="MNASSTDRIEKQILLRAPQARVWRALTDAGEFGEWFRVKLEGPF
                     VPGGRTTGQITYPGYEHLRMEVLVERMEAESLFAFRWHPAAVDPAVDYSCEPSTLVEF
                     RLEAVAEGTLLRLVESGFDQLPAEQREEAYHRNDGGWTEQMGNIQRHVAG"
     gene            2464..2928
                     /locus_tag="VFV26_03940"
     CDS             2464..2928
                     /locus_tag="VFV26_03940"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEX4845344.1"
                     /translation="MLDVPQIVRVAAQTAAVIPFRIPRAEIQQVMGQGIQELLATVAA
                     QGIKPVGPVFSHHFRMDPEFFEFEVGVPLAKPVKPQGRVKPGQLPGATVARTTYRGGY
                     EGLASAWSDFDTWVQAEGYTPALDLWECYTAGPESGPDPATWRTDLYRPLIR"
     gene            2958..3263
                     /locus_tag="VFV26_03945"
     CDS             2958..3263
                     /locus_tag="VFV26_03945"
                     /inference="COORDINATES: protein motif:HMM:NF009508.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI-like protein"
                     /protein_id="HEX4845345.1"
                     /translation="MHFLLVYEVGPEYLERRAEFRNEHLALAWEAHARGELLLGGALA
                     EPVDTALLLFQGDSPSAAERFAAADPYVLHGLVRHWRVRPWITVAGAQAATPVHPGR"
     gene            3341..3727
                     /locus_tag="VFV26_03950"
     CDS             3341..3727
                     /locus_tag="VFV26_03950"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX4845346.1"
                     /translation="MSWLEKYANPAYALLRIVSGLLFAFHGVQKVFGLLTQHHPPVGS
                     QIWIGGILELVGGLAILVGLQTRLAAFICSGMMAVAYIQFHWKLQFGAAFWPAVNQGE
                     LAVIYCFLFLFIACRGGGTWCVDKTA"
     gene            3724..4197
                     /locus_tag="VFV26_03955"
     CDS             3724..4197
                     /locus_tag="VFV26_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEX4845347.1"
                     /translation="MTSNPSIRIFVDADACPVKDEVFRVATRCGLKVLLVSNSPLRVP
                     RNPLFESVVVARGQFDGADDWIVKQITASDIAVTADIPLAARCLEKGARALDAKGRVY
                     TPESIGDALASRELMTHLRAMGEMGTGPAPFTARDRSTFLQRLDDLIQALRRRTR"
BASE COUNT          596 a         1553 c         1465 g          665 t
ORIGIN      
        1 ggacaggatc cggcggcccc ggagctgagg gacacccccg cgcgggtggc ggagttctgg
       61 gccgagcgcc tggcgggcta cggcgtggac ctggccgcgg agctgaagcc cctgcccggg
      121 gagctttccc ccgtgcccgt catcctggag cgcatcccct tcgtgagcac ctgcgaacac
      181 cacctggccc ccttcgaagg ccacgccacc atcggctacc tgcccggggc gggcggcacc
      241 gtgggcctca gcaagctggt gcgtgtggtg caggcctatg cctggcgcct gcaggtgcag
      301 gagcgcatgg cccagcagat cgccgacgcc ctccaggccc acctccgccc cgccgcctgg
      361 ggcgtgcaac tggtggccat ccacacctgc atggggcacc gcggggtgaa gacccccggg
      421 gtgcccgtgc ggaccacgct catgggcggg agctgggagg cggccccccc cgccccattc
      481 agaggctgag ttcccgccgg accggaggat tggccattcc ccgaaccccc ttcctcgccg
      541 ctgcgcaggc ccgccggatc ctgaggctgg gaatctgggg gctgctcggg tggctctggt
      601 tccagatcca gcggctccgg gcgccccgac ccgatccgcg gcccgccgcg accctgggcg
      661 aggccttcct gcagggggcg aacctcccct ggttttcctg cggcaacgat ttcgggggca
      721 acgcctggca tccggagggg gggatctccg cgcctggaag gatccaagcc gtccagaggg
      781 ccttcgccgc catggagcgg gacgggatca cctgcctccg gtggttcctc ttcgccgatg
      841 ggcgctccgg gatcctcgcg gacccgacag gacggcccgc ggggttggat gaccgggtgt
      901 tccccgacct ggacctggcc ttccatctgg cttcccgcca cggcatccgg atcctgcccg
      961 tgtgcttcga tttcctcctc tgcgctccgc cgcagtgggc caacggcgtg cagctgggcg
     1021 ggcgcagccg ctggttccaa gacccggagg cctgggcgat cctggaaacc cgggtgttga
     1081 cccccctgtt cacccgttac gggaaccatc cggccctcct cgcctgggac ctcttcaacg
     1141 agccggaatg ggccgccttc ggcatgggct gggaggaggc cggtatcgcc ccctgggtcc
     1201 tccggtcgcg cctcgaacgg atggtccagc tggcccatcg acagggaaac cgcccggtga
     1261 ccgtgggcct cggcaccgcc cgcgggctcc ccctggtgcg gggcctcggc ctggatgtct
     1321 tccagatcca ctggtacgac cgccacgagg cggcctcgcc cctggaccgc cccgtggagc
     1381 agctccgctt ggaccggccc ctgctgctgg gggagttccc cacccggaat tcccgccgga
     1441 gccgcgccga gatcctggag acggcccgcc ggaacggcta ctgcggggcc ctggcctggt
     1501 ccatccgggc gggagatgcc ttctccggga tggggcccgg tgccgaggac tgatcaaccc
     1561 tcgacgaagg ccttgaggcg gtccaaggcc tcgtcccact gccgggagag gccttcgagg
     1621 tagcggtggg catcatcgag ccgccccggc tccagctccc agatgcattc ccggccctgg
     1681 cggcggctgc gcaccagccc ggccccggcg agcacgccca ggtgcttggt gatggcctgc
     1741 cgggataggg cggaggcgcg gctcaggccc gtgatggagt ggggcccgcc cgaaccgagg
     1801 cgcgccagca gctggagccg cgtcccatcc cccagggccg cgaagagcgg cgcggcctcc
     1861 cgcaacggga caggcatcgc cggggccacg gcctcacccg gcgacgtgcc gctggatgtt
     1921 gcccatctgc tcggtccagc ccccatcatt cctgtgatag gcctcctccc gctgctcggc
     1981 cggcagctga tcgaagccgg actccaccag ccggagcagc gtgccctcgg ccacggcttc
     2041 gaggcggaac tcgaccaggg tgctgggttc gcagctgtag tccaccgccg gatccacggc
     2101 ggcgggatgc cagcggaacg cgaacaggga ttcggcctcc atgcgctcca ccaggacctc
     2161 catgcgaagg tgctcatagc cggggtaggt gatctgcccg gtggtgcgcc cgcccggcac
     2221 gaaggggccc tccagcttca cgcggaacca ttcgccgaat tccccggcgt ccgtgagcgc
     2281 ccgccagacg cgcgcctggg gcgcccgcag caggatctgc ttctcgatgc ggtcggtgct
     2341 cgatgcattc atgcgcaacc tcgtggttgc atattatctc aacccggaag gaaacgcatc
     2401 tgggagggtg tctgcggctt atccttcctt ccgcgggccc cgagcggccc ttgcggaggt
     2461 cccatgctcg acgtgccgca gatcgtccga gtggctgccc agacggcggc ggtcatcccc
     2521 ttccgcatcc cccgggcgga gatccagcag gtcatgggac agggcatcca ggaactgttg
     2581 gccaccgtgg cggcccaggg gatcaagccg gtgggcccgg tgttctccca ccatttccgc
     2641 atggaccccg agttcttcga attcgaggtc ggcgtcccct tggccaagcc cgtgaagccc
     2701 cagggccggg tgaaaccggg ccagctgccc ggggccacgg tggcccggac cacgtaccgc
     2761 gggggctacg agggcctggc ctccgcctgg agcgatttcg acacctgggt ccaggccgaa
     2821 ggctacaccc cggccctgga tctgtgggag tgctacaccg cgggccccga atcgggcccc
     2881 gatcccgcca cctggcgcac ggacctctac cggcccctga tccgctgaag cccgcaacca
     2941 tccctgctgg aggccccatg cacttccttc tggtctacga agtgggcccg gaatacctgg
     3001 agcgccgggc ggagttccgg aacgagcacc tggccctggc ctgggaggcc cacgcccgag
     3061 gcgagctgct gctgggcggg gccctggcgg aacccgtgga cacggccctg ctgctgttcc
     3121 agggcgactc cccttcggca gcggagcgct tcgcggcggc ggatccctac gtgctgcacg
     3181 gcctggtgcg ccactggcgc gtgcggccct ggatcacggt ggcgggcgcc caggcggcca
     3241 cgccggtgca cccgggccgc tgatcccagc caggagctga ttcgggcccc gttcccgcgg
     3301 gagccgggca gaatgtccac acatctttcc cggaggcacc atgtcgtggc ttgagaagta
     3361 cgccaacccc gcctatgccc tgctgaggat cgtctcgggc ctgctgttcg ccttccatgg
     3421 cgtccagaag gtcttcggcc tgctgacgca gcaccacccg ccggtgggtt cccagatctg
     3481 gatcggcggc atcctggagc tggtgggcgg gctggccatc ctcgtagggc tccagacgcg
     3541 gctggcggcc ttcatctgca gcggcatgat ggcggtggcc tacatccagt tccactggaa
     3601 gctccagttc ggcgcagcct tctggcccgc cgtgaaccag ggcgaactgg cggtgatcta
     3661 ctgcttcctg ttcctcttca tcgcctgccg gggcggcggc acctggtgcg tggacaagac
     3721 cgcgtgacgt ccaacccctc catccgcatc ttcgtggacg ccgacgcctg cccggtgaag
     3781 gacgaggtct tccgggtggc cacgcgctgc gggctgaagg tcctgctcgt gtccaattcg
     3841 cccctgcgcg tgccccgcaa cccgctgttc gaatcggtgg tggtggcccg gggccagttc
     3901 gacggggcgg acgactggat cgtgaagcag atcacggctt cggacatcgc cgtgaccgcg
     3961 gacatccccc tggcggcccg ctgcctcgaa aaaggggccc gggccctgga tgccaagggc
     4021 cgggtgtaca cgcccgaatc catcggcgat gccctggcca gccgagagct gatgacgcac
     4081 ctccgcgcca tgggcgagat gggcacgggc ccggcgcctt tcacggcgag ggaccgctcc
     4141 accttcctgc agcggctcga cgacctgatc caggcgctgc ggcgccgcac gcggtagact
     4201 gccctggagg caggagtgga tccaaccttc gtgatgatcg gataagccat ggccaggaag
     4261 cccaattaca acttcgaga
//
LOCUS       DASUDT010000189         2547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1577773, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000189 DASUDT010000000
VERSION     DASUDT010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577773"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VFV26_03960"
     CDS             <1..376
                     /locus_tag="VFV26_03960"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845348.1"
                     /translation="RAFRILLVDDDELIRLAVGPMLEMMGHQVDTAADGFEAVRRFEE
                     GLQVDLVILDMNMPGLNGSETLDRLLTLRPGQRVLMASGYHDQDIRELMARHPDIQSL
                     QKPFSLDDIQRKFQDMGLAQDA"
     gene            473..835
                     /locus_tag="VFV26_03965"
     CDS             473..835
                     /locus_tag="VFV26_03965"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX4845349.1"
                     /translation="MTILDPIPGLDIDAGLRTVGGRMDSLVRLLRKYGELHAEDGRLF
                     REGIASGEIEAAQRLAHSLKGAAGFLGLVLIQRLSGSLETALREGTSRDQVERLLEAF
                     ERENASVCAAIQALPPAP"
     gene            complement(843..1799)
                     /locus_tag="VFV26_03970"
     CDS             complement(843..1799)
                     /locus_tag="VFV26_03970"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845350.1"
                     /translation="MARTRRDPLETQPPGPVSQELPMDSIRVLVVEDEPISLDALVEN
                     LRFEGYDTTGVSSGAEAWRSISEHPDGFDVILLDRVMPDMDGIEILRRLKAKSSIMRA
                     SVIMQTALSGDTDIVEGLRAGAYYYLTKPFTSQALLAIVAAAARDRRGYRKLELDAQQ
                     ATRALACLSSGQFTFQTPEQAWDLATVIAKATPNPERAVGGLSELMLNAVEHGNLGIT
                     YAGKSLLLAEGRWRDEIARLLALPEHAAKRASIFFERLEGEIRFLIRDEGAGFEWRDY
                     LELSPERAFHLHGRGIAMSRQIWFDRLEYRGCGNEVLAVIRA"
     gene            complement(1849..2541)
                     /locus_tag="VFV26_03975"
     CDS             complement(1849..2541)
                     /locus_tag="VFV26_03975"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003222172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX4845351.1"
                     /translation="MLTLGGCDPGPAHPAAPVQEQERALARARMVREQLVARGLTDAR
                     VLEAMARVPRHEFVPAGPRGEAYEDWPLPIGHGQTISQPYIVAFMTAALEPKAGDRVL
                     EIGTGSGYQAAVLSGLVAEVYTVEIVAPLAQRAEADLRRLGYTNVKVRAGDGHLGWPE
                     AAPFDAIIVTCAPEKVPQALVDQLKAGGRLIIPVGSPWGTQELVLLRKGPGGLERQVI
                     LPVRFVPMVKGR"
BASE COUNT          380 a          893 c          894 g          380 t
ORIGIN      
        1 ccgcgccttc cgcatcctgc tggtggacga tgacgagctg atccgcctcg ccgtgggacc
       61 catgctggag atgatgggcc accaggtcga taccgccgcc gatggcttcg aggccgtgcg
      121 ccgcttcgaa gaggggctcc aggtggatct ggtgatcctg gacatgaaca tgccgggcct
      181 caacggttcg gagaccctgg accgcctcct gacgctccgg ccaggccaga gggtgctcat
      241 ggccagcggg taccacgatc aggacatccg ggaactgatg gccaggcacc ccgacatcca
      301 gagcctccag aagcccttca gcctcgatga catccagcgg aagttccagg acatggggct
      361 ggcccaggat gcctgagccc gcccccagcc ccgacccgcg gccggtccca ttcaaggtag
      421 tattcaagga cgtaatcatc ttcgagcggc ggttcgacat cagggggctc ccgtgaccat
      481 cctcgacccc atcccgggcc tcgatatcga cgcgggccta aggaccgtgg gcggccggat
      541 ggacagcctg gtgcggctgc tccgcaagta cggggagctc cacgcggaag acggccgcct
      601 gttccgcgag gggatcgcca gcggcgagat cgaagccgca cagaggctcg cccattccct
      661 gaagggggct gcggggttcc tggggctggt cctcatccag cggctttccg gatcgctgga
      721 gacagccctc cgggagggca cctcccggga ccaggtcgag cggctgctgg aggccttcga
      781 gcgcgagaac gcctcggtct gcgcggccat ccaggccctg ccccccgcgc cctgacttca
      841 gcctaggcgc ggatcacggc caggacctcg ttgccgcagc cccggtactc caggcggtcg
      901 aaccagatct gccgggacat ggcgatcccg cgcccgtgca ggtggaaggc ccgctcgggg
      961 ctcagttcga ggtagtcccg ccactcgaag ccggcgccct cgtcccggat caggaaccgg
     1021 atctccccct ccagccgttc gaagaagatg ctggcccgct tggccgcatg ctcgggaagg
     1081 gccagcaggc gggcgatctc gtcgcgccag cggccctcgg ccaggagcag ggactttccg
     1141 gcataggtga tgccgagatt cccgtgctcg acggcgttga gcatgagctc ggacagcccc
     1201 cccacggccc gttcgggatt cggcgtggcc ttggcgatca ccgtggcgag gtcccaggcc
     1261 tgttccggcg tctggaaggt gaactggccg ctgctgaggc aggccagggc ccgggtggcc
     1321 tgctgggcgt ccagctcgag cttgcggtag ccccggcggt ccctggccgc ggcggcgacg
     1381 atggccagca gggcctggga ggtgaagggc ttcgtcaggt agtagtaggc ccccgcccgc
     1441 agcccctcca cgatgtccgt gtcgccggag agggcggtct gcatgatgac cgaagcccgc
     1501 atgatcgagg atttggcctt gagccggcgc aggatctcga tgccgtccat gtccggcatg
     1561 acccggtcca ggaggatgac gtcgaatccg tccggatgct cggagatgct ccgccaggcc
     1621 tccgcgccgc tggacacgcc cgtggtgtcg tagccttcga agcggaggtt ctcgacgagc
     1681 gcgtcgaggc tgatcggttc gtcttcgaca accagtacgc ggatggaatc catgggcagt
     1741 tcctgggaca cggggccggg cggttgggtt tccagcgggt cccgacgggt tcgggccatg
     1801 cccatccatc ggccggggca ccgcatccgc tgaaaatggg atcggtcgtc accggccctt
     1861 caccatcggc acgaaccgca cgggcaggat cacctgccgc tccagccccc cgggcccctt
     1921 ccgcagcagg accagctcct gcgtgcccca gggggagccc accgggatga tcaggcggcc
     1981 ccccgccttg agctggtcca ccagggcctg gggcaccttt tccggggcgc aggtgacgat
     2041 gatggcgtcg aagggggcgg cctcgggcca gcccaggtgg ccgtcccccg cccggacctt
     2101 cacgttggtg tagcccaggc gccggaggtc ggcctcggcg cgctgggcca ggggcgcgac
     2161 gatctccacg gtgtagacct ctgccaccag gcccgacagc accgccgcct ggtagccgga
     2221 gcccgtgccg atctccagca cccggtcccc ggccttcggc tccagggcgg cggtcatgaa
     2281 ggccacgatg tagggctggg agatggtctg gccgtggccg atgggcaggg gccagtcctc
     2341 gtaggcctct ccgcggggcc ccgcggggac gaactcgtgc cggggcaccc gggccatggc
     2401 ctccagcacc cgggcatccg tgaggccccg cgccacgagc tgctcccgca ccatgcgcgc
     2461 ccgcgccagg gcgcgctcct gctcctggac gggcgccgcg gggtgggcgg gcccgggatc
     2521 acagcccccg agggtcagca tcaaggc
//
LOCUS       DASUDT010000190         4620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_893045, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000190 DASUDT010000000
VERSION     DASUDT010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4620
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_893045"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VFV26_03980"
     CDS             <1..678
                     /locus_tag="VFV26_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEX4845352.1"
                     /translation="EYERAVIFTLGKVGPSPKGPGLIFVFRPFQRAVVVSLRTVVLDV
                     PSQDIITRDNVSLKVSAVVYFKVLDPKQAIVGVENYYDATSQMAQTTLRSILGEVTLD
                     ELLADREKLSQRLREIIDRSTEPWGIEVTSVELKSVDLPEQIQRAMGKQAEAEREKRA
                     KIIAAEGELMASHQLLEAANTISANPTAIQMRYLQTLAEIATEKNSTIVFPLPIELMK
                     AFEKFAK"
     gene            complement(647..2620)
                     /locus_tag="VFV26_03985"
     CDS             complement(647..2620)
                     /locus_tag="VFV26_03985"
                     /inference="COORDINATES: protein motif:HMM:NF023418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminaseTgpA domain-containing protein"
                     /protein_id="HEX4845353.1"
                     /translation="MRWARWIDHLPLWVALGAAVSTEIYDPGELVLMALPLAAAALVE
                     VMRWDLGRHHRWLEVGALAFFLADLARGRGIFPVAIHTLFVLAGLRLALPRELPQRRQ
                     LVLMGFLLFLTTAVSTTDLAFLLWALVWLGAAAAALLQQSWEPSASLRRGVLTRPPYG
                     RVPGWIAGSLVLGAGFFLVLPRLTVGFRPAGFLGTANAQGQAGLGDHLDLSHGGPIAP
                     NPEVVLRIVPPPGTDPARLQGLDLLPGVALESLEDERWSTSLLTPDAAFPMRRQMGES
                     LQAEFLFTPSLQGILTLPYGTFVVAPPGPHLRRGDGGSLRWRFPQARPIPLGVSWHPA
                     HASTPEPRLSPRRLDHLLRLGPEQAAVQRASLRLAPGILPAPELAQTLERALRGFRYT
                     LDNPSGRAAHPLEDFLERTQAGHCEYFASAMAQMLRVRGVPARVVIGYRLGPWIPEGG
                     YFRVSQDQAHSWVEYWHEGRWRWADPTPAAAAGPGGGLASLDVLTRWLDALRYQWDRH
                     VVRFSDQDQVAGLSWIQARSQGWEWRWKAPPPGLSWGLGLLAAAWTAWRTRHLWRPVP
                     EGPGRIRALRPLLARTRRVAAPAAGETARAWLLRLAVLRPERGPFLTELADLVDAEAY
                     GNRNGAASALAKAEAAVWRGWKPSTSRTSRRPS"
     gene            complement(2617..3738)
                     /locus_tag="VFV26_03990"
     CDS             complement(2617..3738)
                     /locus_tag="VFV26_03990"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX4845354.1"
                     /translation="MRCRIQLPEDRPWRVLGLMSGTSADGVDVAAVEVDPAAFPDGRP
                     FLALLGHHAAPYPEALKTEVLAAASNRLDPAGLCILQRRLGDHHARAAADLCAALDLK
                     PDLAALHGQTVQHHPAQGASLQLADPYVLAEALGCPVVWDLRRRDLALGGQGAPLVPL
                     PERWLRGADPWLALNLGGIANLAAWDGAQLRAWDTGPGMSLLDLAARRWLGLAFDPGG
                     TAASGTVQQGLVDRWMQHPYFHQPPPKSTGREVFGETWLQAEAAGLETLPVADRLATL
                     AAFSAEAVAHEVARLGPQVSTARGLVSGGGSLHGRLRAELARRLPLILEDDLAFPTGS
                     REAVSWALLGAASALGLPGNLPGVTGAARPAALGSWVWP"
     gene            3812..4375
                     /locus_tag="VFV26_03995"
     CDS             3812..4375
                     /locus_tag="VFV26_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845355.1"
                     /translation="MFWIILIAGIVLFFVLRGKKDRAEQLGASRRALPTGPLEPHTFA
                     CPYPKCPACAASGDRMKQDWDGLRAVKWTCGYCGALAGVQSLKDEELPPSARRRLGLG
                     GPMQGSMPMQPGGYDQPGGGMGGLLTGMMIGSMMGGGSHHHGGQSGGDGWSGGSSDGS
                     SSDWGESSSGSSDWGDSGGGDSGGGDW"
     gene            complement(4421..>4620)
                     /locus_tag="VFV26_04000"
     CDS             complement(4421..>4620)
                     /locus_tag="VFV26_04000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845356.1"
                     /translation="DKGEVTHASASHGRSEKKWPPWNGQDQRESGPIMDTLLPGSRET
                     SNESNGDINIAIHTSEAIWLI"
BASE COUNT          717 a         1587 c         1714 g          602 t
ORIGIN      
        1 gagtacgagc gggcggtgat cttcaccctc ggcaaggtag ggccttctcc caaggggccg
       61 ggcctcatct tcgtcttccg ccccttccag cgggccgtgg tggtgagcct gcggacggtg
      121 gtgctggacg tccccagcca ggacatcatc acgcgcgaca acgtgagcct gaaggtgagc
      181 gccgtcgtct acttcaaggt gctggatccc aagcaggcca tcgtgggggt ggagaactac
      241 tacgacgcca ccagccagat ggcccagacc acgctccgca gcatcctagg cgaggtcacg
      301 ctggacgagc tgctggcgga ccgggagaag ctgagccagc gcctgcgcga gatcatcgac
      361 cgctccacgg agccctgggg catcgaagtc accagcgtgg aactgaagag cgtggacctg
      421 cccgagcaga tccagcgcgc catgggcaag caggccgagg ccgagcgcga gaagcgggcc
      481 aagatcatcg ccgccgaagg cgagctgatg gccagccacc agctgctgga ggccgccaac
      541 accatcagcg cgaaccccac ggccatccag atgcgctacc tgcagaccct cgccgagatc
      601 gccacggaga agaacagcac catcgtcttc ccgctgccca tcgaactcat gaaggccttc
      661 gagaagttcg cgaagtagac ggcttccagc cgcgccagac cgcagcctcc gccttcgcca
      721 gggcggaggc tgctccgttc cggttgccgt aggcttcggc gtccacgagg tccgccagct
      781 ccgtcaggaa gggcccccgt tcgggccgga ggaccgccag gcgcagcagc caggcgcggg
      841 ccgtctcgcc ggccgcgggg gcggccaccc gccgggtccg ggccagcagg ggacgcagcg
      901 cgcggatgcg gccgggcccc tcgggcacgg ggcgccagag gtggcgggtg cgccaggcgg
      961 tccaggcggc ggcaagcagg cccaagcccc aggacaggcc cggcgggggc gccttccagc
     1021 gccattccca gccctgggac cgggcctgga tccaggagag cccggccacc tggtcctggt
     1081 cggaaaagcg caccacatgg cggtcccact ggtagcgcag ggcgtccagc cagcgcgtca
     1141 ggacatccag ggacgccagg ccgccgcccg gcccggccgc cgcggctggc gtcggatccg
     1201 cccagcgcca ccggccttcg tgccagtact ccacccagct gtgggcctgg tcctggctca
     1261 cccggaagta gcccccctcg ggaatccagg ggcccagccg gtagccgatc accacgcggg
     1321 ccgggacccc ccggacccgc agcatctggg ccatggccga ggcgaagtac tcgcaatggc
     1381 ccgcctgggt gcgttccagg aaatcctcca gggggtgggc cgcccggccg gaggggttgt
     1441 ccagggtata gcggaagccc cgcagggccc gctccagggt ctgggccagt tccggtgcgg
     1501 ggaggatgcc cggggccagc cgcaggctcg cccgctggac ggcggcctgc tccgggccga
     1561 ggcggagcag gtggtccagc cgccgcggag agagccgggg ctccggggtt gaggcgtgtg
     1621 cgggatgcca ggacaccccc agcgggatgg ggcgggcctg ggggaagcgc cagcggaggc
     1681 tgccgccatc gccccggcgg aggtgcgggc cgggcggcgc caccacgaag gtcccgtagg
     1741 gaagggtgag gatgccctgg aggcttgggg tgaagaggaa ttcggcctga aggctctccc
     1801 ccatctgccg ccgcatgggg aaggccgcat cgggcgtcag cagagaggtg gaccatctct
     1861 cgtcctcgag ggattcgagg gccacgcccg gaagaaggtc caggccctgc agcctcgcgg
     1921 gatccgtgcc aggaggcggg acgatgcgca ggacgacttc agggttcggg gcgatgggcc
     1981 cgccgtggga gaggtcgagg tggtcgccca gccccgcctg tccctgggcg tttgcggttc
     2041 ccaggaagcc cgcggggcgg aatcccacgg tcagccgggg caggacgagg aagaagcccg
     2101 cgcccagcac caggctgccc gcgatccatc ccggcacccg gccatagggg gggcgggtga
     2161 ggacgccccg ccggaggctg gcggaaggct cccagctctg ctgtagaagg gccgccgccg
     2221 cagcgccgag ccacacgagg gcccagagga ggaaggccag atccgtggtg ctcacggccg
     2281 tggtgaggaa gagcaggaag cccatgagca ccagctggcg gcgctggggc agctcccggg
     2341 gcagggcgag ccgcagcccc gccagcacga agagcgtgtg gatggccacg gggaagatgc
     2401 cgcggccccg ggccaggtcc gccaggaaga aggccaaggc gcccacctcc agccagcggt
     2461 ggtggcgtcc cagatcccag cgcatcacct ccaccagggc cgccgccgcc aggggcaggg
     2521 ccatcaggac cagttccccc gggtcgtaga tctccgtgga gacggccgcc ccgagggcca
     2581 cccagagggg caggtggtcg atccagcgcg cccacctcac ggccagaccc agctccccag
     2641 cgccgcgggc cgcgctgcgc cggtcacgcc agggaggttg cccggcaggc ccagggcgct
     2701 ggcggcgccg aggagggccc agctcaccgc ttcccgggag cccgtgggga aggccagatc
     2761 gtcttcgagg atgagcggca ggcgccgggc cagctcggcg cggaggcgtc cgtgcaggct
     2821 tccgccaccg ctcaccaggc cgcgggccgt ggacacctgg ggtccgaggc gggccacctc
     2881 gtgggccacg gcttcggcgc tgaaggcggc cagggtggcc agccggtccg ccacggggag
     2941 ggtttccaat cctgcggcct ccgcctggag ccaggtctcg ccgaagacct cccgtcccgt
     3001 ggatttcggg ggcggctgat ggaagtaggg gtgctgcatc cagcggtcca cgaggccctg
     3061 ttggacggtc ccggaggccg ccgtgccgcc gggatcgaag gccagaccca gccagcggcg
     3121 ggcggcgagg tccagcagcg acatgccggg ccccgtgtcc caggcgcgga gctgcgcccc
     3181 atcccaggcc gccagattgg caatgccgcc caggttcaag gccagccagg ggtccgcccc
     3241 ccgcagccag cgttcgggca ggggcacgag cggcgcgccc tggccgccca gggccaggtc
     3301 ccggcgccgc agatcccaca ccaccgggca acccagggcc tcggccagca cgtagggatc
     3361 cgccagctgg aggctggcgc cctgggcagg atggtgctgg acggtctgcc cgtgcagggc
     3421 ggccaggtcg ggcttcagat cgagggccgc gcacaggtct gcggcggcgc gggcgtggtg
     3481 gtcccccagg cgccgctgga ggatgcagag gcccgccgga tcgagccggt tggaggcggc
     3541 ggcgagaact tccgttttca gggcctcggg atagggcgct gcgtggtggc ccaggagggc
     3601 caggaagggt cggccatccg gaaaggcggc gggatccact tccaccgccg ccacgtccac
     3661 gccgtcggca ctggtgccgg acatgaggcc cagcacccgc caggggcgat cctccgggag
     3721 ctggattcgg cagcgcatgc gctgatgatg ccagcaagcg cggggccctg aacgaattcc
     3781 gggtaccctg gatgttctcg ggggttccca catgttctgg atcatcctca tcgccggtat
     3841 cgtgcttttc ttcgtcctgc gcgggaagaa ggaccgggcg gaacagcttg gcgcttcgcg
     3901 ccgcgccctc cccacgggcc cgctggagcc ccacaccttt gcctgcccct atcccaagtg
     3961 cccggcctgc gcggcttccg gcgaccggat gaagcaggac tgggacggcc tccgtgcggt
     4021 gaagtggacc tgcggctact gcggcgccct ggcgggcgtg cagtcgctca aggatgagga
     4081 actccccccc tccgcccggc ggcggctggg cctgggcggg cccatgcagg gctcgatgcc
     4141 catgcagccg ggaggctatg accagcccgg cggcggcatg gggggcctgc tcacgggcat
     4201 gatgatcggc agcatgatgg gcggcggcag ccaccaccat ggtggccagt ccggcggaga
     4261 cggctggagc ggcggatcct ccgacggctc ctccagcgat tggggcgagt ccagctccgg
     4321 ttccagcgac tggggtgatt ccggtggtgg ggactctggc ggcggggact ggtagatcct
     4381 ggcgaccggc agtggggttg cctgctgacg ccatttccag ctaaatcagc catatggctt
     4441 cagaggtgtg aatggcgata tttatatcgc cattggattc attggaagtt tcccttgatc
     4501 cgggcaataa cgtgtccatg attgggccac tttccctttg atcctggcca ttccagggtg
     4561 gccatttctt ttcggagcgg ccgtggcttg ccgacgcatg cgttacctca cccttatcct
//
LOCUS       DASUDT010000191         2609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_716252, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000191 DASUDT010000000
VERSION     DASUDT010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_716252"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            393..674
                     /locus_tag="VFV26_04005"
     CDS             393..674
                     /locus_tag="VFV26_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845357.1"
                     /translation="MAAQNLQRAGGRVMGAEPGQALNAYGQIHFTELPGLRPVFACSS
                     KAFMFEPGDPTGWNHSLRVDVPIAATREDILGQADSILAAALDTPFPGK"
     gene            complement(765..2246)
                     /locus_tag="VFV26_04010"
     CDS             complement(765..2246)
                     /locus_tag="VFV26_04010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845358.1"
                     /translation="MTLSNPPSGPKPLPPPLKAGSGPKTVPAPGASGSGPKQVPQAQA
                     PRPQGAELLAELMQAQRQLTQAMHESRDLRAKLSRRSHQMQVLQHVSEILAATSKGGQ
                     VVSVVLDVLAQEFHCPRAVVWTLEDGGSGYVPKEGAGLTRAQWSAMKLPAPNPFPETP
                     LVLFQSQWLDAACGAGTLGPLCGADGASLYFVPFEHQLLLLGFAVLAMPADRKLEEEE
                     QDTIAILQRQAAISLYNAWLFRDLSEQRDALQRQTLELERVNDALREADQLKSEFLAL
                     TSHELRTPLTGILGFTRLVMDGLYDDAEEMRSMLQDSYASGQHLLGLLNDILDLAKIE
                     SGRLEVHPEPFSLGVLLEEVKPIAEAYPRKPAVALEWPESLDVPEVLVDPSRLKQVLL
                     NLLSNALKFTKEGSVSIQVERRPGHIALLVVDTGIGVSAEAQTRLFQKFAQAEGGHSR
                     EFGGTGLGLVICKHMMELMGGTISLSSEGLGHGSTLRITMPIA"
     gene            2293..>2609
                     /locus_tag="VFV26_04015"
     CDS             2293..>2609
                     /locus_tag="VFV26_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845359.1"
                     /translation="MANRAQPLSLQRIVFLSVSVVLCLQVGWWIRLQIRESGRLLEVS
                     TRALKAGRAQAWQMDSLTLLTTLHSQPDPMSRTGSVEGRHATMLSLAERRQAIQTAFP
                     QVEL"
BASE COUNT          415 a          880 c          897 g          417 t
ORIGIN      
        1 aggggcggac tgaactccgg accatcccca ccctggccca gggccgcgta cgatggaccg
       61 gcctggagcc cgccgcgcca ctcctccgga acatagaccc caagcggttc tacacccacc
      121 gcctgatcga gggtagccgc acgctctacc tccgctaccg ggtctgccgc aatcagccgg
      181 gggaagaatc cgtgtgggcc tatacgggac ggatccagaa agaggtgaag gcggctccca
      241 tcgagcgggc cgtggtggac ctgcgtggca atgctggcgg gaatagcctt cacttttggc
      301 ggatggagcg ctggctccgc aagcaccctg cattctcccg gcctggaggg ctcttggttc
      361 tcacggactc agggaccttc agttctggat tcatggccgc ccagaacctt cagcgggccg
      421 gtgggcgagt gatgggagcc gaacccgggc aggctctgaa cgcttacggc cagatccatt
      481 tcacagaact acccggcctc cgccctgtct tcgcctgctc cagcaaggct ttcatgttcg
      541 agccgggaga ccccactggc tggaaccact cactcagggt ggatgtcccc atcgctgcca
      601 cccgcgagga catcctgggc caagccgatt ccatcctcgc cgcggccctc gacactccct
      661 tccccggcaa atgacggagc aaggccggaa aacggcaagg ctgttcacct atcgcggatc
      721 gccagatccg cgcatggaac gggcgcccgc cagagccccc acgatcaggc gatcggcatc
      781 gtgatccgca gggtgctccc gtggcccagg ccttcgctgc tgaggctgat ggtgccgccc
      841 atcagttcca tcatgtgctt gcagatcacc aggccgaggc ccgtgccgcc gaactcgcgg
      901 ctgtggccgc cttcggcctg ggcgaatttc tggaagaggc gggtctgggc ctcggcgctc
      961 acgccgatgc cggtgtccac caccaggagg gcaatgtggc cgggccggcg ctccacctgg
     1021 atgctgacgc tgccctcctt ggtgaacttg agggcgttcg acagcaggtt cagcagcacc
     1081 tgcttgaggc ggctgggatc caccagcact tccgggacat ccaaggattc gggccattcc
     1141 agcgccacgg cgggcttgcg gggataggcc tcggcgatgg gcttcacctc ctccagcagc
     1201 acgcccaggc tgaagggctc gggatggacc tcgaggcggc cggactcgat cttggccaga
     1261 tccaggatgt cgttcagcag ccccagcagg tgctggccgg aggcatagct gtcctggagc
     1321 atggaccgca tctcctcggc atcgtcgtag aggccatcca tgaccagccg cgtgaagccc
     1381 aggatgcccg tgagcggcgt gcgcagctcg tggctggtga gggccaggaa ttcgctcttc
     1441 agctggtcgg cctcgcgcag ggcgtcgttc acgcgctcca gctcgagggt ctgccgctgg
     1501 agcgcgtccc gctgttcgga aaggtcccgg aacagccagg cgttgtagag cgagatggcc
     1561 gcctgccgct gcaggatggc gatggtgtcc tgctcctctt cctccagctt ccggtccgcg
     1621 ggcatggcga ggacggcaaa cccgagcagg aggagctggt gctcgaaggg gacgaagtag
     1681 agggacgcgc catcggcccc gcagaggggc ccgagggtac ccgccccgca ggcggcatcc
     1741 agccattggc tctggaacag caccaggggc gtctcgggaa agggattcgg ggccgggagc
     1801 ttcatggccg accactgggc gcgggtgagg ccggcgccct ccttgggcac atagcccgat
     1861 ccgccgtcct ccagggtcca caccacggcc cgcgggcagt ggaattcctg ggccagcacg
     1921 tcgaggacca cgctgaccac ctggccgccc ttggaggtgg ccgcgaggat ctcggacacg
     1981 tgctggagca cctgcatctg gtgggagcgg cggctcagct tggcccgcag atcccgggat
     2041 tcgtgcatgg cctgggtgag ctgccgctgg gcctgcatga gctcggccag cagctcggcc
     2101 ccctggggcc gcggcgcctg ggcctgcggg acctgcttgg gaccggagcc cgaggcgccc
     2161 ggcgcgggaa cggtcttggg ccccgatccc gctttcaggg gaggcgggag cggcttgggg
     2221 ccggagggcg gattggagag ggtcatggga ctccaggatg gcctcatgga gggacactgc
     2281 caagatggag ccatggccaa ccgcgcccag cccctctctc tgcaacggat cgtcttcctg
     2341 tcggtgtccg tggtgctgtg cctccaggtg ggctggtgga tccgcctgca gatccgggag
     2401 tccggccggc tgctggaggt gagcacccgg gccctgaagg ccgggcgggc ccaggcctgg
     2461 cagatggaca gcctgacgct gctcacgacc ctccactccc agccggatcc catgtccagg
     2521 accgggtccg tggaagggcg ccatgccacc atgctcagcc tcgcggaacg ccggcaggcc
     2581 atccagacgg ccttccccca ggtcgagct
//
LOCUS       DASUDT010000192         2365 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1533848, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000192 DASUDT010000000
VERSION     DASUDT010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1533848"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..1245)
                     /locus_tag="VFV26_04020"
     CDS             complement(55..1245)
                     /locus_tag="VFV26_04020"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEX4845360.1"
                     /translation="MSAPRWPYPLLRLKPGKESLISKRHPWVYSGALAKLAESPLVRL
                     ADESGQVLGVGTASPTNPLAARLFRFEDAPLDEAFFRVRFESALALRKELGLWDPEGG
                     CRWIFGEGDGLPGLVVDRYAQALVLQVGTAGLEALRDLWWPILFEIGKREGLTAFAER
                     SQSGRREEGLDPVNRLLKGSLSGPVTVREDEARLTVDLLRGQKTGFFLDQRDHRLQLG
                     RVSQGKRVLNAFGYTGGFSIHAGLGGASQVATLDISAPALDQADRDWAANGLDPAAHL
                     RMEGDAFELMRQLEPLGWDRVIVDPPAFAKQRKDVDKAFKAYKDVFRLGARATAPGGM
                     LWVFSCSQHLDRMRFQEAVWTALLEAGREARVLAHLGQPSDHPYALNHPEGFYLKGLW
                     LALD"
     gene            1276..>2365
                     /locus_tag="VFV26_04025"
     CDS             1276..>2365
                     /locus_tag="VFV26_04025"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphatase/phosphodiesterase
                     family protein"
                     /protein_id="HEX4845361.1"
                     /translation="MRRSALLAVLLALLPLRGGPAEPAPVLMISADGLAADQFSARSM
                     PKVWELSKEGRRGAGLPPFPATTYNGHATLATGCWPEHHGVVANSYRDPATGKLVPIA
                     HHIEDIQREPLWVAATRSGVRTAVYHWVGATGPWEGVSPWRMERFSPGHPDVEALAFS
                     EAALRDGARLVMTYLSGTDGEGHIQGPRSAGTRAKLARLDDELAPWLRRLLAAHPGLR
                     VILTADHGMAPMRRRIHLPSLLDGIPCDLVAHGGSAYVYLRHPGDAARALARLRKAGL
                     KAWTREQVPARHHLSGNPRVGDLVVLAPEGQWLSKARSSREEAAEWHGRQGAHAYSAD
                     TRAMHAWLVVLGAGRGPLGAVPLWDLAPT"
BASE COUNT          335 a          895 c          805 g          330 t
ORIGIN      
        1 atgtctccgc tttcctccgt tcctcggctt tcctccgcgt tcagaattcc gttttcagtc
       61 cagcgccagc cacaacccct tgaggtagaa cccctcggga tggttcaggg cgtagggatg
      121 atcgctgggc tgccccaggt gggccaggac acgggcctcg cgcccagcct ccagcagcgc
      181 cgtccacaca gcctcctgga agcgcatgcg gtccaggtgc tggctgcagg agaagaccca
      241 cagcatcccg ccgggggccg tggcgcgggc gcccagacgg aagacgtcct tgtaggcctt
      301 gaaggccttg tccacgtcct tgcgctgttt ggcgaaggcg ggcggatcca cgatgacgcg
      361 atcccagccc aggggctcca gctgccgcat cagctcgaag gcatcgcctt ccatgcgcag
      421 gtgcgcggcg ggatccaggc cgttggcagc ccagtcgcga tccgcctggt ccagggccgg
      481 agcgctgatg tcgagggtgg ccacctgcga ggcgccgccc aggcccgcgt ggatgctgaa
      541 gccgccggtg tagccgaagg cgttgagcac gcgcttcccc tgcgacactc ggcccagctg
      601 gagccggtgg tcccgctgat ccaggaagaa gccggtcttc tggccccgga gcaggtccac
      661 ggtgagcctc gcttcgtctt cccgcaccgt gacgggcccg ctgaggctgc ccttgagcag
      721 ccggttcacg ggatcgagtc cctcctcccg gcggccggac tggctgcgct ccgcgaaggc
      781 cgtgaggccc tcccgcttgc cgatctcgaa gagaatgggc caccacaggt cgcgcagcgc
      841 ctccaggccc gcggtaccca cctggagcac cagggcctgc gcgtagcgat ccaccaccag
      901 gcccggcagg ccgtcgccct cgccgaagat ccaccggcag ccgccttcgg gatcccacag
      961 gcccagctct ttgcgcaggg ccagggccga ttcgaagcgg acgcggaaga aggcctcgtc
     1021 caggggcgcg tcctcgaagc ggaacagcct cgccgccagg gggttcgtcg gactggccgt
     1081 gcccacgccc agaacctggc cggactcgtc cgccagccgc accaggggcg attccgcaag
     1141 cttcgccagg gccccggagt acacccaggg atggcgcttt gagatcaggg actccttgcc
     1201 gggcttcagc cggagcaggg gatagggcca acggggagcg ctcatggatc cagggtagct
     1261 tgataccctc gaaggatgcg ccgatccgcc ctgctcgccg tcctgctcgc cctcctgccg
     1321 ctccggggcg gccccgcgga accggctccc gtgctgatga tcagtgccga cgggttggcg
     1381 gcggaccagt tcagcgcccg cagcatgccg aaggtctggg agctctcgaa ggagggccgc
     1441 cggggggcgg gcctgccccc cttccccgcc accacctaca acggccacgc cacgctggcc
     1501 acgggctgct ggcccgagca ccacggcgtg gtggccaaca gctaccgcga ccccgccacg
     1561 gggaagctgg tccccatcgc ccatcacatc gaggacatcc agcgggagcc cctctgggtg
     1621 gccgccaccc gcagcggcgt ccgcacggcg gtctaccact gggtgggcgc cacgggcccc
     1681 tgggagggtg tcagcccctg gcgcatggag cggttcagcc cgggccatcc ggatgtcgag
     1741 gccctggcct tcagcgaagc cgccctgcgg gacggtgccc gcctcgtcat gacctacctg
     1801 tccggcaccg atggcgaggg ccacatccag ggcccccgga gcgccgggac ccgggccaag
     1861 ctggcgcgcc tggatgacga gctggccccc tggctccggc ggctgctggc agcccatcct
     1921 ggcctgcggg tgatcctcac cgcggaccac ggcatggccc ccatgcgccg gcgcatccac
     1981 ctgccctccc tgctggacgg catcccctgc gatctcgtcg cccacggcgg cagcgcctac
     2041 gtctacctcc gccatccggg cgatgccgcc agggccctcg cccgcctgcg caaagctggg
     2101 ttgaaggcct ggacccggga gcaggtgccc gcccgccacc acctgtcggg caacccccgc
     2161 gtgggcgacc tggtggtgct ggcgcccgag ggacagtggc tgtccaaggc ccgctccagc
     2221 cgagaggagg ccgcggaatg gcacggccgc cagggggccc atgcctactc cgccgacacc
     2281 cgggccatgc acgcctggct ggtggtcctg ggcgccgggc gcggccccct gggagccgtc
     2341 cccctctggg acctggcccc cacgg
//
LOCUS       DASUDT010000193         3234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1092039, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000193 DASUDT010000000
VERSION     DASUDT010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092039"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /gene="tdh"
                     /locus_tag="VFV26_04030"
     CDS             <1..779
                     /gene="tdh"
                     /locus_tag="VFV26_04030"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HEX4845362.1"
                     /translation="SGEGHITCGHCRNCRAGKRHLCRNTVGVGVNRTGSFAEYLAIPA
                     FNVFKVPDNVPDEVASIFDPYGNAAHTALSFDLVGEDVLITGAGPIGIMAVAIAKHAG
                     ARHIVITDVNEYRLDLARKMGATVAVNPMQKGLPEVMKGLGMTEGFDVGLEMSGNRSA
                     FQSMLEAMHHGGRIALLGILPGDCAIDWSQVIFKGLILKGIYGREMFETWYKMAAMIQ
                     SGLDITPVITHRYGIDDFQKGFDAMRSGQSGKVILDWGVK"
     gene            complement(877..1500)
                     /locus_tag="VFV26_04035"
     CDS             complement(877..1500)
                     /locus_tag="VFV26_04035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845363.1"
                     /translation="MHRTCFAPALALLALLAGCSSEDPRLPANLYEEARKLNLEGRSL
                     EAKAMMKQLADRYPDSEAAQQAKRDLFLIEAFVSRDLADRQKQVRAAMKRVTDALVRY
                     RAKKGEYPESLGELLPDYLDQLPEAPWGHPFLYRPYVTRPIEEVQVKRGPARQKFNTR
                     FDGYYLACLGTDAVPGGEGLASDLLIKDGTLWTDGLFPPVPQPQPLR"
     gene            1555..2208
                     /gene="udk"
                     /locus_tag="VFV26_04040"
     CDS             1555..2208
                     /gene="udk"
                     /locus_tag="VFV26_04040"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF004018.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEX4845364.1"
                     /translation="MSDRPMLVGIVGGSGSGKTSVAAELVKRLRKKAVATLLLDMDAY
                     YAPLEVVKGRFGGRPVNWDHPHAFDLELMAAHLTALHRGESIRKPAYDFTLSDRTGWE
                     EPVPPGQVVILEGLLLFALPELRDQLDTKIFVDTDADIRILRRIRRDTKERGRSLESV
                     MDQYENSVRPMHLEFVEPSKRWADLIVPTGVENRTALDVITHHICSRVLGQGEAQRV"
     gene            2201..2518
                     /locus_tag="VFV26_04045"
     CDS             2201..2518
                     /locus_tag="VFV26_04045"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX4845365.1"
                     /translation="MFENGIHLSAETYRDLPEAVQRLDVRERWEYDLARIPGAILIPL
                     GELADRAGELDPSRPVAAYCHHGSRSLYALRFLQGAGFGDIAHLAGGIDAYSRMDPSV
                     PRY"
     gene            2518..3165
                     /locus_tag="VFV26_04050"
     CDS             2518..3165
                     /locus_tag="VFV26_04050"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX4845366.1"
                     /translation="MRLLQRHPEGFDPATAWTQESESVRQDSRLFRQIVARRLSPHSG
                     RPHDFYRLQGPDWVNVVAFTREGDLLVVEQFRHGIDAPTLEIPGGGCDPGEAPEVSAR
                     RELREETGFSSDHWVALGSCTPNPATQNNRCHSFLALDCRPVGALELDSAEELQVWAC
                     AWPEWQTRMRRGEIHHALVLSAFQLLSLWEGWPALLGRLEDSDKSGDRINRISRD"
BASE COUNT          551 a         1039 c         1116 g          528 t
ORIGIN      
        1 tcagcggcga aggccacatc acctgcggcc actgccggaa ctgccgggcc ggcaagcgcc
       61 atctctgccg gaacacggtg ggcgtgggcg tgaaccgcac gggctccttc gccgagtatc
      121 tcgccatccc ggccttcaac gtgttcaagg tgcccgacaa cgtgccggac gaggtggcct
      181 ccatcttcga tccctatggc aacgccgccc acacggccct cagcttcgat ctggtgggcg
      241 aggacgtgct gatcaccggc gccggtccca tcggcatcat ggcggtggcc atcgccaagc
      301 acgcgggcgc ccgccacatc gtcatcaccg acgtgaacga ataccggctg gacctggccc
      361 ggaagatggg cgccaccgtg gcggtgaatc ccatgcagaa gggcctgccc gaagtcatga
      421 agggcctggg catgaccgag ggcttcgacg tgggcctgga gatgagcggc aaccgcagcg
      481 ccttccagtc catgctggag gccatgcacc acggcggacg catcgccctg ctgggcatcc
      541 ttcccggcga ctgcgccatc gactggagcc aggtgatctt caaggggctg atcctgaagg
      601 gcatctacgg ccgcgagatg ttcgagacct ggtacaagat ggccgccatg atccagagcg
      661 gcctggacat cacgcccgtc atcacccacc gctatggcat cgacgacttc cagaagggct
      721 tcgatgccat gcggagcggg cagagcggca aggtgatcct ggactggggc gtgaagtaga
      781 actcggcacg gtgtggtacc tgcaaaatgc ggcccatggc cgcattttgt ttgctgcgca
      841 cgtcgtgcgc agtctgccac aaggctcact ggaacctcaa cgcaagggtt gcggctgcgg
      901 cacaggcggg aagagcccgt cggtccagag agtgccgtcc ttgatgagga ggtcgctggc
      961 gagcccttcg ccgccgggaa cggcatcggt gccgaggcag gccaggtagt atccatcgaa
     1021 cctggtgttg aacttctgcc gggccgggcc ccgcttgacc tggacttcct cgatgggacg
     1081 cgtgacgtag ggccggtaga ggaagggatg gccccaggga gcttcgggga gctggtccag
     1141 gtaatcggga agcagctcgc ccagggactc cgggtattcg cctttcttgg cccggtaccg
     1201 gacgagggca tcggtgacgc gcttcatggc cgcccgcacc tgcttctgcc ggtcggccag
     1261 gtcgcggctc acgaaggctt cgatgaggaa aaggtcgcgt ttggcctgct gggcggcctc
     1321 ggaatccggg tagcggtccg ccagctgctt catcatggcc ttggcttcga ggctgcggcc
     1381 ttcgaggttc aacttgcggg cctcctcgta gaggttggcc ggcagccggg gatcctcgga
     1441 actgcaaccg gccaggagcg cgagaagggc cagggcgggg gcgaagcacg tgcgatgcat
     1501 ggcatgaacc ttagcagagg cgcggggcgt taggatggag gaaagggagg gtacatgagc
     1561 gacaggccga tgctggtggg catcgtgggg ggctccggca gcgggaagac ctcggtggct
     1621 gccgaactgg tgaagcgcct ccggaagaag gccgtggcca cgctcctgct ggacatggat
     1681 gcctactatg cgcccctgga ggtggtgaag gggcgcttcg gggggcggcc cgtgaactgg
     1741 gaccaccccc atgccttcga cctcgagctc atggccgcgc acctcacggc cctccatcgc
     1801 ggcgagagca tccgcaagcc cgcctatgat ttcaccctct cggaccgcac cggctgggag
     1861 gaaccggtgc ccccgggcca ggtggtgatc ctggaggggc tgctgctctt cgccttgccg
     1921 gagctgcggg atcagctgga caccaagatc ttcgtggaca ccgatgcgga catccgcatc
     1981 ctgcggcgca tccggcggga cacgaaggag cggggccgca gcctcgagag cgtcatggac
     2041 cagtacgaga acagcgtgcg gcccatgcac ctggaatttg tcgagcccag caagcgctgg
     2101 gcggacctca tcgtgcccac gggcgtggag aaccgcacgg ccctggacgt catcacccac
     2161 cacatctgca gccgcgtgct cggccagggg gaggctcagc gtgtttgaga acggcatcca
     2221 cctgtccgcg gaaacctacc gggatcttcc ggaagctgtg cagcgcctgg atgtgcggga
     2281 gcgctgggaa tacgacctgg cgcgcatccc cggcgccatc ctgattcccc tgggcgagct
     2341 ggcggaccgg gccggcgagc tggatccctc ccggcccgtg gcggcctact gccaccatgg
     2401 gagccgcagc ctctatgccc tccggttcct ccagggcgcg gggttcggcg acatcgcgca
     2461 cctcgccggc ggcatcgacg cctacagccg catggatcct tctgttccga ggtactgatg
     2521 cggctgctgc agcgccatcc agagggcttc gatcctgcga ccgcctggac ccaggagtcc
     2581 gaaagcgtgc ggcaggactc gcggctcttc cgccagatcg tggcccggcg cctgagcccg
     2641 cactcgggcc gcccgcatga cttctaccgc ctccagggcc cagactgggt gaacgtggtg
     2701 gccttcaccc gggagggcga cctgctggtg gtggaacagt tccgccatgg catcgatgcc
     2761 cccaccctgg agatcccggg cgggggctgc gatccgggcg aggccccgga ggtgtccgcc
     2821 cggcgggaac tgcgggagga gacggggttc agttcggacc attgggtggc cctgggctcc
     2881 tgcacgccca acccggccac ccagaacaac cgctgccaca gcttcctggc cctggactgc
     2941 cgcccggtgg gggcactgga gctggattct gccgaggagc ttcaggtctg ggcctgcgcc
     3001 tggcccgaat ggcagactcg catgcgccgg ggagaaatcc accacgccct ggtgctgtct
     3061 gccttccagc tgctgagcct gtgggagggc tggccggcgc tgctcgggag gctggaggac
     3121 tcggacaaaa gcggagacag gattaacagg attagtaggg attaacagga ttcaaaagag
     3181 gtacaacacc acatccatcc tgttaatccg gcttttcatc ctgttaatcc tgtc
//
LOCUS       DASUDT010000194         4129 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_849149, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000194 DASUDT010000000
VERSION     DASUDT010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4129
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849149"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            301..621
                     /locus_tag="VFV26_04055"
     CDS             301..621
                     /locus_tag="VFV26_04055"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4845367.1"
                     /translation="MRNLLKLIAVTAALSASLAAQGGSDTKGKFFFKKTCKSCHASGG
                     SAKEVTPLSKTQAQWKAYFAAGKHKKGAEKLDAVLKPEQVKDVQTFLVNHASDSPQPE
                     TCGG"
     gene            683..2413
                     /locus_tag="VFV26_04060"
     CDS             683..2413
                     /locus_tag="VFV26_04060"
                     /inference="COORDINATES: protein motif:HMM:NF023281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HEX4845368.1"
                     /translation="MNSRITLALVAMLAPAALSAQSNQDLQKQIEQLKLQLKAVEEKA
                     ATPQDVDTRLTKVETKIAGDNIQWGGDLRTRFESSKWGFKPYTQFMGFAQSAGAPAGS
                     LPPGYPYPFMALTQNVPAQDWTNSVQWSTRLRLKMGITINERAKIMGRLTMYKVHGGA
                     DVPTFNGSPNTVANSFNSAKVPGTDVLRVERASLVYDFPVGILSIGRQNTSDGPPFEV
                     REGSERQATPQALAVNAMVDGVGFKFQLDKIGMPEGTLLGICYGVGYESGFGGGGSVK
                     ANAAPVGFNFTNVNWTAQGPNAAAATLQVNSIGPLKDSTVLGAMFDMPLLFQLGESVQ
                     SANLYIGYNRMANLTDIPFGTTNNFPVPAMPGMGGMPSVQYVTATNNLGDIDQWTATW
                     KHKVGDTFTYFASYGRIKSLPNGKLSQYGAYWTMPAGMGGQTQQLAGFGGLLGDATKS
                     ETASAYYVGMRWDPTEKFGVGVEFNHGSPRWWTYSPATGEATEKLGTRGDVWEGYIHW
                     QFAKNAAFRLGYLDYKYSHAFSGWHISPGPAMPGQSWEDAYDLNKNPMLQYGFPASVK
                     TTYASIEVKF"
     gene            2495..>4129
                     /locus_tag="VFV26_04065"
     CDS             2495..>4129
                     /locus_tag="VFV26_04065"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX4845369.1"
                     /translation="MDRRLFLKAAGATAGAVATTQVGCLKYFKKGRSASTDNREVPTT
                     CELCPNKCSAIAVVEGGFVKKLNPNPENPKSRDMLCARGNAAIRQVYDPDRLKQPMIR
                     VGARGEGKWKPVSWDEAFDFAAKKLSEVKEKHGPEASLWSSTEGFQEVFFKNLGLAFG
                     SPNIVRHPTLCLASVNLAYSATFGTVPSFDLLNSKFVIMSGANRFESIITPDTMDLIG
                     GVMERKAKLVYLDPRFTVTAAKADEWYPVKPGTDLAFILAMIHVIIKEGRQSKDFVAA
                     YTTGFDQLAEHVKQYTPEWAEKETEIPAKDIVRIAREFSDAAPRSLYYAGRRSSWYQN
                     DFQMRRAQAILNAIVGNWDQPGGMVPNAKLPKGEFLFMPWDEPKAPRVDEIEKEFPLA
                     AKGDGAYLKLRENVLSGKPYPVKAWMVYKQDPMNAMPDQAKTLKMIEGMDFIGVIDVQ
                     MSDMAWYADVVFPESAYLERTDPVEVMPGIWPAVVYRQQVVKPIHDTKPNLDIIQGLA
                     KRLGLSDYFDYTIEQWVDAEFKELPIPMAADHMKKHG"
BASE COUNT          810 a         1510 c         1177 g          632 t
ORIGIN      
        1 ggaagattcc atgggggcct cgcggattcc caccatagca gcccttctgg tcgccggata
       61 aaagcctcca gatccatgcc agatgagggt tcttgaatca aattacttcg tggttattta
      121 attaatcgtg atcatggtca cgaacgactt gacctcgtta tccacccatt catcctctat
      181 tcagcggcgc ccttcagcgc ccgcgccaag tccccattgg atccccagga tccagcgcct
      241 tcggcctgcc cggccctgcg ccacgccaat cccccacacc cttccgaaag gacgtgctcc
      301 atgcggaacc tcctcaagct catcgccgtc accgcggcgc tctccgcctc cctggccgcc
      361 cagggcggca gcgacaccaa gggcaagttc ttcttcaaga agacctgcaa gtcctgccac
      421 gcctccggcg gctctgcgaa ggaggtcact ccgctctcca agacccaggc ccagtggaag
      481 gcctacttcg ccgccggcaa gcacaagaag ggcgccgaga agctcgacgc cgtcctgaag
      541 cccgagcagg tcaaggacgt gcagaccttc ctggtcaatc acgcctcgga ttccccgcag
      601 cctgaaacct gcggcggctg attcccgtac caccggcgtt ccaccccctg cccctgaacc
      661 ccacccttag gagacacacc ccatgaactc ccggatcacg cttgcccttg tcgccatgct
      721 ggcgcccgcg gccctgagcg cccagtcgaa ccaggatctg cagaagcaga tcgaacagct
      781 gaagctccag ctgaaggccg tcgaggaaaa ggccgccacc ccgcaggatg tcgatacccg
      841 cctgaccaag gtcgagacca agatcgccgg cgacaacatc cagtggggcg gcgatctgcg
      901 cacccgcttt gaaagcagca agtggggctt caagccctac acgcagttca tgggcttcgc
      961 ccagagcgcc ggcgcccccg ccggttcgct gcctccgggc tatccctatc ccttcatggc
     1021 cctcacgcag aatgtccccg cccaggactg gaccaattcc gtccagtggt ccacccgcct
     1081 gcgcctgaag atgggcatca ccatcaatga gcgcgccaag atcatgggcc gcctgacgat
     1141 gtacaaggtc cacggcggcg ccgacgtccc caccttcaac ggctcgccca ataccgtggc
     1201 caactccttc aacagcgcca aggtgccggg cacggacgtg ctccgcgtcg aacgcgccag
     1261 cctggtctat gacttccccg tgggcatcct gtccatcggc cgccagaaca cctcggacgg
     1321 cccgccgttc gaagtgaggg agggttccga gcgccaggcc accccccagg ccctggccgt
     1381 gaacgccatg gtcgatggcg tcggtttcaa gttccagctc gacaagatcg gcatgcccga
     1441 gggcacgctg ctgggcatct gctacggcgt cggctatgag tccggcttcg gcggcggcgg
     1501 cagcgtgaaa gccaacgcgg cccccgtggg cttcaacttc accaacgtga actggaccgc
     1561 ccagggcccc aatgccgccg cggccaccct gcaggtgaac agcatcgggc ccctcaagga
     1621 cagcacggtg ctcggcgcca tgttcgacat gcccctgctc ttccagctcg gcgaaagcgt
     1681 ccagagcgcc aacctctaca tcggctacaa ccggatggcc aacctcacgg acatcccctt
     1741 cggcaccacc aacaacttcc ccgtgcccgc catgcccggc atgggcggca tgccctccgt
     1801 ccagtacgtc accgccacca acaacctggg cgacatcgac cagtggaccg ccacctggaa
     1861 gcacaaggtg ggcgacacct tcacctactt cgccagctac ggccgcatca agagcctccc
     1921 caacggcaag ctgagccagt acggcgccta ctggaccatg cccgccggca tgggcggcca
     1981 gacccagcag ctcgccggct tcggcggcct gctcggcgac gcgaccaaga gcgagaccgc
     2041 cagcgcctac tacgtgggca tgcgctggga tcccaccgag aagttcggcg tcggcgtcga
     2101 gttcaaccac ggctccccgc ggtggtggac ctacagcccc gccaccggcg aggccacgga
     2161 aaagctcggc acccgcggtg acgtctggga aggctacatc cactggcagt tcgccaagaa
     2221 tgccgccttc cgtctcggct acctggacta caagtacagc cacgccttca gcggctggca
     2281 catctccccc gggcctgcca tgcccggcca gagctgggaa gatgcctacg acctgaacaa
     2341 gaacccgatg ctgcagtacg gcttccccgc ctcggtgaag acgacctacg cctcgatcga
     2401 agtgaagttc tagaccctac gcacagcggg ccgggggatt gctcctccgg cccgctgcgc
     2461 gccttgctcg gagaccccga tgggaaccac tcgcatggat cgccgcctgt tcctgaaggc
     2521 cgcgggcgcc accgccggag ccgtcgccac cacccaggtg ggatgcctca aatacttcaa
     2581 gaagggccgg agcgcctcga ccgataaccg cgaggtcccc acgacctgcg agctgtgtcc
     2641 caacaagtgc tccgccatcg ccgtggtgga gggcggcttc gtcaagaagc tgaaccccaa
     2701 ccccgagaat ccgaaatcca gggacatgct ctgcgcccga ggcaacgcgg ccatccggca
     2761 ggtctatgat cccgaccgcc tcaagcagcc catgatccgc gtgggcgccc ggggcgaagg
     2821 caagtggaag cccgtgagct gggacgaggc cttcgacttc gcggccaaga agctctccga
     2881 ggtgaaggag aagcacggcc cggaggcctc cctctggtcc tccaccgagg gcttccagga
     2941 ggtcttcttc aagaacctgg gcctggcctt cggctcgccg aacatcgtcc gccatcccac
     3001 cctctgcctg gcctccgtga acctggccta cagcgccacc ttcggcaccg tgcccagctt
     3061 cgacctgctc aacagcaagt tcgtgatcat gtccggcgcg aaccgcttcg aaagcatcat
     3121 cacgcccgac accatggacc tcatcggcgg cgtgatggag cgcaaggcga agctggtcta
     3181 cctcgatccc cgcttcaccg tcaccgcggc caaggccgac gaatggtacc ccgtcaagcc
     3241 cggcaccgac ctggcgttca tcctcgccat gatccacgtg atcatcaagg aggggcggca
     3301 gagcaaggac ttcgtcgccg cctacaccac gggctttgac cagctggccg agcacgtgaa
     3361 gcagtacacc ccggagtggg ccgagaagga gaccgagatc cccgcgaagg acatcgtccg
     3421 catcgcccgg gagttctccg atgccgcgcc ccgctcgctc tactacgccg gacggcgctc
     3481 ctcgtggtac cagaacgatt tccagatgcg ccgcgcccag gccatcctca acgccatcgt
     3541 cggcaactgg gaccagcccg gcggcatggt gcccaacgcc aagctgccca agggcgagtt
     3601 cctcttcatg ccctgggacg agcccaaggc gccccgcgtg gacgagatcg agaaggaatt
     3661 tcccttggcc gccaaggggg acggcgccta cctgaagctg cgggagaacg tgctcagcgg
     3721 caagccctac cccgtgaagg cctggatggt ctacaagcag gaccccatga acgccatgcc
     3781 cgaccaggcc aagaccctga agatgatcga ggggatggat ttcatcggcg tcatcgacgt
     3841 ccagatgagc gacatggcct ggtatgccga cgtggtcttc cccgaaagcg cctaccttga
     3901 gcggaccgat ccggtcgaag tcatgcccgg catctggccc gccgtggtct accgccagca
     3961 ggtggtgaag cccatccacg acacgaagcc gaacctggac atcatccagg gcctggccaa
     4021 gcgcctgggc ctctccgact acttcgacta caccatcgag cagtgggtcg acgcggagtt
     4081 caaggaactg cccatcccca tggccgccga ccacatgaag aagcacggc
//
LOCUS       DASUDT010000195         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1688766, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000195 DASUDT010000000
VERSION     DASUDT010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688766"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VFV26_04070"
     CDS             <1..238
                     /locus_tag="VFV26_04070"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX4845370.1"
                     /translation="TVWGIIDAFQNIGNTGNASLATVAIPIAEALVATAFGLVAAIPA
                     LMAYNFFQGQLKQWQTELDDFALEFIGLSERNFT"
     gene            249..1064
                     /locus_tag="VFV26_04075"
     CDS             249..1064
                     /locus_tag="VFV26_04075"
                     /inference="COORDINATES: protein motif:HMM:NF023385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3473 domain-containing protein"
                     /protein_id="HEX4845371.1"
                     /translation="MKPALPLSIDWEDWFQLCCPPYDQPEALDRFECRLPLATERTLA
                     LCSELGATATWFCLGDQARRHPHLLRRIADEGHAIGLHGLTHRRAFDMDRATWRASVQ
                     DGKALLEDLTGRPVVGYRAPEWSLRGAAADWWQDLPELGFRYDSSRAPLAVIGDPAWP
                     RRPHRFANGLWELPPPVLWSGPPRSPLWGWGLRVLPFSVVRRALESLAREDAGTPLVL
                     HPWELDEGQPDLPGASFGHRFAHSAGLKGHGSHLRDLFAGFRLTSLEAWVEGR"
     gene            1061..1783
                     /gene="yaaA"
                     /locus_tag="VFV26_04080"
     CDS             1061..1783
                     /gene="yaaA"
                     /locus_tag="VFV26_04080"
                     /inference="COORDINATES: protein motif:HMM:NF015820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEX4845372.1"
                     /translation="MTATPLVLLAPSEEKAGGGVRGRLPETPAQRWVRDQLVALAATG
                     SPEALRKAFDVKDLALDKARAEASALVGPVPLLPALSRYRGVAFQALDATSLKPEAWA
                     QVFILSNLRGLVRGDEPMPPYKLKLGAIPGLKTHWRKALAPGLAALPEGAVWELLPGD
                     SADLLKGWARPRHTVEIFDARGKAVSHFAKKYRGLVARWILLHQQGDPRKVLRGRIPG
                     CQWAGVDENDRGGLTLRLLVEP"
     gene            1780..>2549
                     /locus_tag="VFV26_04085"
     CDS             1780..>2549
                     /locus_tag="VFV26_04085"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HEX4845373.1"
                     /translation="MSDDCNRTPFWQRQPQLPLDVQRFLQARLEAALGDPEARQALVW
                     PTILGAPALRKAHPEGIPEVDLLGHAARMLSALGHHDPAAAWAAHRNAWPDTAEAAAT
                     GWRPAAAWGAWGPLVSLRCGWQLAALTPLPLGSRYLLACGVSLFNHGLYHECHDALEP
                     LWDAAEGDLKGQLQGLILLAGGYHHLQLHNRRGLVALWEEALGRLESCGGRVATPWGE
                     VRAEAALDLTARRLDHGKRMTEEADFGPLWTLDRPTWEL"
BASE COUNT          329 a          943 c          910 g          367 t
ORIGIN      
        1 caccgtctgg ggcatcatcg acgccttcca gaacatcggc aataccggca acgccagcct
       61 cgccacggtc gccatcccca tcgccgaggc gctggtggcc accgccttcg gcctggtcgc
      121 cgccattccc gcgctgatgg cctacaactt cttccagggc cagctcaagc agtggcagac
      181 cgagctggac gacttcgccc tcgagttcat cggcctcagc gagcggaact tcacgtgagg
      241 cgcgcggcgt gaagccggcg ctgccgctct ccatcgactg ggaggactgg ttccagctct
      301 gctgtccgcc ctatgaccag cccgaggccc tggaccgctt cgagtgccgg ctgccgctgg
      361 ccacggagcg gacgctggcc ctctgctcgg aactcggcgc cacggccacc tggttctgcc
      421 tgggagacca ggcccggcgc catccgcacc tgctgcggcg catcgcagac gaaggccatg
      481 ccatcggcct gcacgggctg acccatcgac gggccttcga catggaccgc gccacctggc
      541 gggcttcggt gcaggatggc aaggccctgc tggaggacct cacaggccgt cccgtggtgg
      601 gctaccgcgc cccggagtgg agtctccgcg gtgccgccgc ggactggtgg caggaccttc
      661 cggaactggg cttccgctac gactccagcc gcgcgcccct ggcggtcatc ggggatcccg
      721 cctggccgcg gcgcccgcac cgctttgcca atggcctgtg ggagctgccg ccgccggtgc
      781 tctggtcggg tccgccccgg tcgcccctct ggggttgggg cctgcgggtg ctgcccttca
      841 gcgtggtccg acgggccctg gagtccctcg cgagggagga tgcgggcacg cccctggtgc
      901 tgcacccctg ggagctggac gaaggccagc cggacctgcc cggggcctcc ttcgggcacc
      961 gcttcgccca cagcgccggg ctcaaggggc acggcagcca cctgcgggac ctcttcgcgg
     1021 gcttccggct caccagcctc gaggcctggg tggagggccg atgacggcga cgcccctcgt
     1081 cctgctggcg ccctccgagg agaaggccgg tggcggcgtc cgcggccgcc ttccggaaac
     1141 gcccgcccag cgctgggtac gcgaccagtt ggtggcactg gcggccaccg gctcaccaga
     1201 ggccctgcgg aaggccttcg acgtgaagga cctggccctg gacaaggccc gcgccgaggc
     1261 ttcggccctg gtcggtcccg tgcccctcct gcccgcgctg tcccgctacc ggggcgtggc
     1321 cttccaggcc ctggacgcga cctccctgaa gccggaggcc tgggcccagg tgttcatcct
     1381 gtccaacctg cggggcctag tgcgggggga cgagcccatg ccgccgtaca agctcaaact
     1441 cggggcgatt ccggggctga agacccactg gcggaaggcg ctggcgccag gcctggcggc
     1501 cctgcccgaa ggcgcggtct gggaactgct gccaggcgat tccgcggatc tgctcaaggg
     1561 ctgggcgcgg ccgcgccaca ccgtggagat cttcgatgcc cgcgggaagg ccgtcagcca
     1621 cttcgcgaag aagtaccggg gcctggtggc acggtggatc ctgctccatc agcagggcga
     1681 cccccgcaag gtgctgaggg gccgcatccc cggctgccag tgggccggtg tggacgagaa
     1741 cgaccggggt ggcctgaccc tccggctgct ggtggagcca tgagcgacga ctgcaaccgc
     1801 accccttttt ggcagcgcca gccccagctg cccctggatg tccagcggtt cctccaggcc
     1861 aggctggagg cggccctggg tgatccggag gcccgccagg ccctggtctg gcccaccatc
     1921 ctgggggcgc cggccctgcg gaaggcccat cccgagggga ttcccgaagt ggacctgctc
     1981 gggcacgcgg cccgcatgct cagcgccctg ggccaccacg atccggcggc cgcctgggcc
     2041 gcccaccgga acgcctggcc ggataccgcc gaagccgcag ccacgggctg gcggcccgcg
     2101 gccgcctggg gggcctgggg ccccttggtg agcctgcgct gcgggtggca gctggcggcc
     2161 ctcacgccac tgcccctggg ttcccgctac ctgttggcct gcggcgtgtc gctcttcaac
     2221 cacggcctct accacgaatg ccacgacgcc ctggagcccc tgtgggacgc ggcggagggc
     2281 gatctgaagg gccagcttca gggcctcatc ctcctggcgg gcggctacca ccacctccag
     2341 ctgcacaacc ggcggggcct ggtggccctg tgggaggagg cgctggggcg cctggaatcc
     2401 tgcgggggcc gcgtggccac gccctggggc gaggtgcggg ccgaggcggc gctggacctg
     2461 acggcccggc ggctggacca tgggaagcgc atgactgagg aagcggactt cggccccctg
     2521 tggaccctgg accgtcccac ctgggagct
//
LOCUS       DASUDT010000196         4003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1136165, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000196 DASUDT010000000
VERSION     DASUDT010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136165"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VFV26_04090"
     CDS             <1..434
                     /locus_tag="VFV26_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845374.1"
                     /translation="HRNQQLQQLQELQQLADRLRRGQETLENLEARLPRGSAGELQWS
                     LSKTLHELAKKHGLRLQNVKYGLPSREGARGSDLEAVDVQFVALGVYASHKAFMLDLE
                     SSGLPFAVRDGRLEESPEGARLDIVLRAFRKAGAPDREEEA"
     gene            431..1081
                     /locus_tag="VFV26_04095"
     CDS             431..1081
                     /locus_tag="VFV26_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845375.1"
                     /translation="MSTPAGGAFDFRSMAQELRGNRRTQAALVAFVLVLAYALYTILA
                     PDAPRAKRATATGTTSSLDPRQLQGLRKLPDLAALDRAGELPPGSKVQRDLFLFEAPP
                     PPAKPVKPPPPPPPPTAEELERQRLAQEKATEFAGRPQELRYLGFFKGNPSGLVGAFM
                     KGEEPVTLVQGTLLRDRWKLVSILETRAEFQNTKYPDLRMVLEARDASGGAPVNQF"
     gene            1099..3399
                     /locus_tag="VFV26_04100"
     CDS             1099..3399
                     /locus_tag="VFV26_04100"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HEX4845376.1"
                     /translation="MPFSSFAPIRKTLAAAAILLLAFGCTLHRANKAFDEGRYDEAVA
                     AYREVLRSNPSDTKARIGIRRASQRAAEGHLSLARQAEQRGRQDVVLTEVRRALVLDP
                     DNQIAQDWLIRLEQQAARDKAEADSVDDLELMKAKADTVNAVQLDPRSLEGLDLNFSR
                     RTSLREIFATLSRASGVNIIAHTSFQDQTISIDLRGLPFQRILDTLMLQNDLFYKVID
                     KNTIMVFKATPQNRDLYENQLLKTYYLSNADPAELRSTLTTLNPQLRVFTDKRINAII
                     VKAKPLELAIVDQVIRSLDKAKAEVMVYMELMEVTENSLEQVGLLPVINASDSSGTYR
                     MGATTVNNTSGMNTNSGFTKIHTADIRVLFPNLALDFLKGNGDARLVASPNVRVLSGE
                     TGEINIGEKISTTQSQLSLPTSGSTGGASASSLLGGVGQTSFSYEDVGVKIKVEPRVH
                     HNGEITLKINSLVTTLKSGSTPGRPDLGKREIITLARLRDGETAIFGGLLKDEEQKSL
                     QGIWGLADIPFIGRLVGNTRNSKAKTDVILTIRAVLVRKPMITDQDMAAFNPDEAAAQ
                     ASQFAAKAKPKAPAPAAAPQQGLPAQTAPTTPVPAAPVQAASAESTPPQPGAIQDKKP
                     DGPADDQRAPAASDLVIFMSPVAAEIRTGERVQIGLTVSGGQGLSSGTLELRLPPGLK
                     LGTVTPGDFITTEGGSLEQFPGKDGALKLVFKRSGAGVDSGLLATLEFSGLTPGNAPV
                     LIQSGQFLAGTAPISGRWSNALVTVQ"
     gene            3396..3854
                     /locus_tag="VFV26_04105"
     CDS             3396..3854
                     /locus_tag="VFV26_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX4845377.1"
                     /translation="MSRQGGFTLLELVVTATVLLILASVTVPLARNGLKRQQELELRR
                     NLREIRLAIDEYKKQAEQQKIKAPPAEANFYPESLEVLVEGVPATGSLSRKVRFLRRI
                     PVDPFTGKADWGLRSTSDDANSTSWGGGHVYDVYSLAQGTGMNGIPYREW"
BASE COUNT          723 a         1522 c         1208 g          550 t
ORIGIN      
        1 tgcaccggaa ccagcagctg cagcagctcc aggagctcca gcagctggcc gaccgcctcc
       61 gccggggcca ggagaccctc gagaacctgg aagcccgcct gccccgcgga tccgctggcg
      121 aactccagtg gagcctcagc aagaccctgc acgagctggc caagaaacac ggcctgcgcc
      181 tccagaacgt gaagtacggc ctgcccagcc gggaaggcgc ccggggctcg gatctggagg
      241 ccgtggacgt gcagttcgtg gccctcggcg tctacgccag ccacaaggcc ttcatgctgg
      301 atctggagag ctccggcctg cccttcgccg tgcgggatgg ccgtctcgag gaaagccccg
      361 aaggggcccg gctcgacatc gtgctccgcg ccttccgcaa ggccggcgcc ccggatcgcg
      421 aggaggaggc atgagcaccc ccgctggcgg cgccttcgac ttccggtcca tggcccagga
      481 gctgcgcggc aaccgccgca cccaggcggc cctcgtggcc ttcgtcctgg tcctggccta
      541 cgcgctctac accatcctgg ctccggacgc tccccgtgcg aagcgcgcca cagccacagg
      601 aaccacttcc agcctggatc cacgccagct ccagggcctc cgcaagctcc cggacctggc
      661 ggccctggac cgggccgggg agctgcctcc cggcagcaag gtccagcgcg acctcttcct
      721 cttcgaggcg cccccgcccc ccgccaagcc cgtcaaaccg ccgcccccgc ccccgccgcc
      781 taccgcggag gagctggagc gccagcgcct ggcccaggag aaggccaccg agttcgcggg
      841 gagaccccag gaactccgct acctcggctt cttcaagggg aatccctcgg gactggtggg
      901 cgccttcatg aagggcgagg agcccgtgac cctggtccag ggcaccctcc tcagggaccg
      961 ctggaagctg gtctccatcc tcgagacccg ggccgagttc cagaacacca agtatccaga
     1021 cctgcggatg gtcctggagg cccgcgacgc ctccggcggc gcgcccgtca atcaattctg
     1081 atccgaagga tgccaccgat gccgttctcc tccttcgccc ccatccggaa aaccctggcc
     1141 gccgccgcga tcctgctgct cgccttcgga tgcaccctcc accgggccaa caaggccttc
     1201 gacgagggcc gctacgacga ggccgtggcc gcctaccggg aggtcctgcg cagcaatccc
     1261 tcggacacca aggcccgcat cggcatccgc cgggcctccc agcgcgccgc ggaaggccac
     1321 ctctccctcg cccggcaggc cgagcagcgg ggccgccagg acgtggtgct gacggaagtc
     1381 cgcagggccc tggtgctgga ccccgacaac cagatcgccc aggactggct catccgcctg
     1441 gaacagcagg ccgcccgcga caaggccgag gccgattccg tcgatgacct ggagctgatg
     1501 aaggccaagg ccgacaccgt gaacgccgtg cagctggatc cgcggtccct cgaaggcctg
     1561 gatctgaact tcagccgccg caccagcctg cgggagatct tcgccacgct cagccgcgcc
     1621 tccggcgtga acatcatcgc ccacacctcg ttccaggatc agaccatctc catcgatctg
     1681 cggggcctgc ccttccagcg catcctcgac accctgatgc tccagaacga cctgttctac
     1741 aaggtcatcg acaagaacac catcatggtc ttcaaggcca cgccccagaa ccgcgatctc
     1801 tacgaaaacc agctcctcaa gacctactac ctctccaacg ccgaccccgc ggaactgcgc
     1861 tccaccctca ccaccctcaa cccccagctg cgggtgttca cggacaagcg catcaacgcc
     1921 atcatcgtga aggccaagcc cctggaactg gccatcgtcg accaggtgat ccgcagcctc
     1981 gacaaggcca aggcggaagt gatggtctac atggaactca tggaggtcac ggagaacagc
     2041 ctggagcagg tgggcctgct gccggtgatc aacgcctcgg acagttccgg cacctaccgc
     2101 atgggcgcca ccacggtgaa caacacctcc ggcatgaaca ccaattcggg cttcaccaag
     2161 atccacaccg ccgacatccg cgtgctcttc cccaacctcg ccctggactt cctcaagggc
     2221 aacggcgacg cccgcctggt ggccagtccc aatgtccgcg tgctctccgg cgagaccggc
     2281 gagatcaaca tcggcgagaa gatctccacc acccagagcc agctgtcgct gcccaccagc
     2341 ggttccaccg gcggcgccag cgcctcgtcg ctgctgggcg gcgtgggcca gacctccttc
     2401 tcctacgagg acgtgggcgt gaagatcaag gtggagcccc gcgtccacca caacggcgag
     2461 atcaccctca agatcaacag cctcgtcacc accctgaagt ccggctccac gccgggccgc
     2521 cccgacctcg ggaagcggga gatcatcacg ctcgcccgcc tgcgcgacgg cgaaacggcc
     2581 atcttcggcg gcctgctgaa ggacgaggag cagaagagcc tccagggcat ctggggcctg
     2641 gcggacatcc ccttcatcgg ccgcctggtg ggcaacacgc gcaacagcaa ggccaagacc
     2701 gacgtgatcc tcaccattcg cgccgtcctg gtgcggaagc ccatgatcac cgaccaggac
     2761 atggcggcct tcaatcccga cgaggccgcg gcccaggcca gccagttcgc ggccaaggcc
     2821 aagcccaaag cccccgcccc ggccgccgca ccccagcaag gcctgcctgc ccagaccgcg
     2881 cccaccaccc cggtgccggc agctcccgtc caggcagcct ctgcggaaag cacgcctccc
     2941 cagcccgggg ccatccagga caagaaaccg gacgggcccg ccgatgacca gcgcgccccg
     3001 gcggcctcgg atcttgtcat cttcatgtcc cccgtggccg ccgagatcag gaccggcgag
     3061 cgggtccaga tcggcctcac cgtcagcggc ggccagggcc tcagctcagg cacgctggag
     3121 ctccgcctgc ccccgggcct caagctcggc accgtgacgc ccggcgattt catcaccacc
     3181 gaaggcggaa gccttgagca gttcccgggc aaagacggcg cactgaagct cgtgttcaag
     3241 cgcagcggcg ccggcgtgga cagcggcctc ctggccacgc tggagttctc gggcctcacg
     3301 cccggcaacg ccccggtgct catccagagc ggccagtttc tcgcgggcac cgcgcccatc
     3361 tccgggcgct ggtccaatgc cctcgtgacg gtgcagtgag ccgccaaggc ggattcaccc
     3421 tgctggaact ggtggtcacg gccaccgtgc tgctcatcct cgcctcggtg acggtgcccc
     3481 tggcccgcaa cggcctcaag cgccagcagg agctggagct gcggcggaac ctccgggaga
     3541 tccgcctggc catcgacgaa tacaagaagc aggccgagca gcagaagatc aaggccccgc
     3601 ccgccgaggc caacttctat ccggaaagcc tggaggtcct ggtggagggc gttcccgcca
     3661 ccggatccct cagccggaaa gtgcgcttcc tgcgccgcat tccggtggat cccttcaccg
     3721 gcaaggccga ttggggactc cggagcacca gcgacgatgc caacagcacc agctggggcg
     3781 gcggccatgt ctacgatgtc tacagcctgg cccagggcac gggcatgaac ggcatcccct
     3841 accgtgagtg gtagccccgg ttccggcgcg agaaacggtg ttgcctctcc ccgcgaaccg
     3901 cgctaggctt ggagttcggc acatccggaa ccctagggac ccgggatgct ctttcaagcg
     3961 gatatggcgg aattggtaga cgcgctagtt tcaggtacta gtg
//
LOCUS       DASUDT010000197         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_319087, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000197 DASUDT010000000
VERSION     DASUDT010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319087"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VFV26_04110"
     CDS             <1..588
                     /locus_tag="VFV26_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845378.1"
                     /translation="AWVDLPFLRRAAGWRLSLVGGIEFQRAGGAWPAAFGQLRALKAL
                     LQERLRTPIHLGACGDPRVAALLGRQALREGLPWRASLPLPPAPGAFTPGLAADPRDP
                     APLEVRALQPAAWSDTLDHPPAALLRVPAVPPEAGALALLAQIQPAPALRWLPPDLPP
                     PPPFDPDRPWSPPAAFPFPADPGNGVQRGLFEDFD"
     gene            610..1599
                     /locus_tag="VFV26_04115"
     CDS             610..1599
                     /locus_tag="VFV26_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX4845379.1"
                     /translation="MSAEQLEQRSRVRIALVSITTGIAVLGLKYLSYMLSGSVALKSD
                     AIESIVNVVAAVFALGAVIFAGKPADKDHPYGHGKIEHFSAAFEGGLISLAAVFILLE
                     AAKGFIYGVELKNLGLGLMVNLLAGAINGLLGWFLLTQGRKTRSRALEADGHHILSDF
                     WTTVGIASGLLAVKLTGLKWLDPVMAMAVGLLLARTGFRLVKESSQALLDMEDPEVLE
                     KVLAAMNRARTWDIIAVHEMRTFRSGRYTHVDVHMVVPEFYPVRQAHDLCEDFGKRVL
                     EEAGIEGEVHTHVDPCGRLYCGRCPAESCAIRQVPLAADTTFVLDEATAAGPA"
     gene            1631..3103
                     /locus_tag="VFV26_04120"
     CDS             1631..3103
                     /locus_tag="VFV26_04120"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX4845380.1"
                     /translation="MTQPLLIAKGASDLLLLPRMANRHGLVAGATGTGKTVTLRTMAE
                     RFSAIGVPVFLADVKGDLPGLCKPGGDNPKVAERVDHLKLEGFEYQGYPVAFWDLYGQ
                     QGHPVRTTVSDMGPLLFSRLLNLNDTQGGVLNLVFKIADDNGLLLLDLKDLRSMLQFV
                     GDHAAEFKTQYGNVSAASIGAIQRGLLELESQGAEAFFGEPALDLDDLVQTDPKGRGV
                     INILAADKLINAPKLYATFLLWLLSELFERLPEVGDPDKPKLAFFFDEAHLLFNDAPD
                     ALVDKIEQVVRLVRSKGVGVYFVSQNPLDIPEKVLGQLGNRVQHALRAFTPRDQKAVK
                     AVAETFRANPDLDVAAAITELGVGEALVSFLDEKGRPGIVERAFVCPPESQLSPITQE
                     ERQQAIKASLLAGHYEQAVDRESAFEKLKARADEAMQQEAAEAQAREEAKASKEPARR
                     SDSMIEAFGKSVIRAAGSSIGRQLIRGVMGSLFGGGGHRR"
BASE COUNT          507 a         1208 c         1073 g          523 t
ORIGIN      
        1 gcctgggtgg acctgccctt cctgcgccgg gccgcaggct ggcggctgtc cctggtgggc
       61 ggcatcgagt tccagcgggc cgggggagcc tggcccgcgg ccttcggcca gctgcgggcc
      121 ctgaaggccc tgctccagga acgcctgagg acccccatcc acctgggcgc ctgcggcgat
      181 ccccgggtcg cggccctgct cggacgccag gccctgcggg agggcctgcc ctggcgggcg
      241 agcctgcccc ttcccccggc gcccggggcc ttcacgccgg gccttgccgc agatccgcgg
      301 gaccccgcgc ccctggaagt ccgcgccctc cagcccgccg cctggtccga caccctggac
      361 catccccccg ccgccctcct gcgcgtgccg gcggtgccgc ccgaggccgg ggccctggcg
      421 ctgctggccc agatccagcc cgccccggcc ctccgctggc tgccgccgga tctgccgcca
      481 ccgccgccct tcgatcccga ccgtccctgg tccccgccgg ctgcgttccc cttcccggcg
      541 gatcccggca acggagtcca acgcgggctc ttcgaggact tcgactgata aggtagctgg
      601 agagttccca tgtccgccga acagctcgaa cagaggtccc gggtccgcat cgccctcgtg
      661 tccatcacga caggcatcgc cgtgctcggc ctgaagtacc tgtcctacat gctttcgggc
      721 tcggtggcct tgaagtccga cgccatcgaa agcatcgtga acgtggtggc cgcggtgttc
      781 gccctgggcg ccgtgatctt cgcgggcaag cccgccgaca aggaccatcc ctacggccac
      841 ggcaagatcg agcatttcag cgccgccttc gagggggggc tcatctccct ggccgccgtg
      901 ttcatcctgc tggaggccgc caagggcttc atctacggcg tcgagctgaa gaacctggga
      961 ctgggcctga tggtgaacct gctggccggg gccatcaacg gcctgctggg ctggttcctc
     1021 ctcacccagg gccgcaagac gcgctcccgg gccctggaag ccgacggcca tcacatcctg
     1081 tcggatttct ggaccaccgt tggcatcgct tcgggtctgc tggccgtgaa gctcacgggc
     1141 ctgaaatggc tggatcccgt catggccatg gccgtcggcc tgctgctggc gcgcacgggc
     1201 ttccggctcg tgaaggaatc ctcccaggcc ctgctggaca tggaggatcc cgaagtgctg
     1261 gagaaggtgc tcgccgccat gaaccgggcg cgcacctggg acatcatcgc ggtccacgag
     1321 atgcgcacgt tccgttcggg ccggtacacc catgtggacg tgcacatggt ggtgcccgag
     1381 ttctaccccg tgcgccaggc ccacgacctc tgcgaggact tcggcaagcg cgtcctggag
     1441 gaggcgggca tcgaaggcga ggtgcacact catgtggatc cctgtggccg cctctactgc
     1501 gggcgctgcc ccgcggaatc ctgcgccatc cgacaggtcc ccctggccgc cgacacaacc
     1561 ttcgtcctgg acgaggccac cgccgcgggc ccagcctgag tagactccac tccattcccg
     1621 cgaggtttcc atgacccagc ccctgctcat cgccaaaggc gcctccgatc tcctcctgct
     1681 gcctcgcatg gccaaccgcc acgggctcgt ggccggagcc accggcaccg gcaagaccgt
     1741 gaccctgcgc accatggccg agcggttctc ggccatcggc gtgccggtct tcctggcgga
     1801 tgtgaagggc gacctgcccg gcctctgcaa gcctggcggc gacaacccga aagtggccga
     1861 gcgcgtcgac cacctgaagc tcgagggttt cgaataccag ggctatcccg tggccttctg
     1921 ggatctctac ggccagcagg gccacccggt gcgcaccacg gtcagcgaca tgggccccct
     1981 gctcttttcg cggctgctga acctgaacga tacccagggc ggggtgctga acctggtgtt
     2041 caagatcgcc gacgacaacg gcctgctgct gctggacctc aaggacctcc ggtccatgct
     2101 ccagttcgtg ggcgaccacg ctgccgagtt caagacccag tacggcaatg tctccgccgc
     2161 cagcatcggc gccatccagc ggggcctgct ggagctggag agccagggcg ccgaggcctt
     2221 cttcggcgag cccgccctcg acctcgacga cctcgtccag acggacccca agggccgcgg
     2281 cgtcatcaac atcctggcgg cggacaagct catcaacgcg cccaagctct acgccacgtt
     2341 cctcctctgg ctgctgtcag agctcttcga gcggctgccc gaggtgggcg accccgacaa
     2401 gcccaagctg gccttcttct tcgacgaggc ccacctgctc ttcaacgacg caccggatgc
     2461 cctcgtagac aagatcgaac aggtggtgcg cctggtgcgc tccaaggggg tgggtgtcta
     2521 tttcgtgagc cagaatcccc tcgacatccc cgagaaggtg ctgggccagc tgggcaaccg
     2581 cgtgcagcac gcgctccgcg ccttcacgcc ccgggaccag aaggccgtga aggcggtcgc
     2641 cgagaccttc cgcgccaacc ccgatctcga cgtggctgcg gccatcacgg aactgggcgt
     2701 gggcgaggcg ctggtctcct tcctggacga gaagggccgc cccggcatcg tcgagcgggc
     2761 cttcgtctgc ccgccggaaa gccagctgtc tcccatcacg caggaggaac ggcagcaggc
     2821 catcaaggcc tccctgctgg ccggccacta cgagcaggcc gtggatcgcg aaagtgcttt
     2881 cgagaagctg aaggcccgcg ccgacgaagc catgcagcag gaggccgccg aggcccaggc
     2941 cagggaggag gccaaggctt cgaaggaacc cgcacggcgc agcgacagca tgatcgaggc
     3001 cttcggcaag agcgtcatcc gcgccgccgg cagctccatc ggccgccagc tgatccgcgg
     3061 cgtcatgggc tccctcttcg gcggcggcgg acaccgccgc tgaaacaacg aagtcaccaa
     3121 ggaatcagcc acggataaac acagatgaac acggatgcga ggcatgggcc cgatccgtgt
     3181 tcatccgtgt tcatctgtgg ctaacgggct ttctctgttc aggcggcctg gtgcctcagc
     3241 gcgtcgatgg cggccatgag ggcctgggca tcgctggcgg cgtggaggtt ctggcggaag
     3301 ccgtggccgc c
//
LOCUS       DASUDT010000198         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_606409, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000198 DASUDT010000000
VERSION     DASUDT010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606409"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VFV26_04125"
     CDS             complement(<1..679)
                     /locus_tag="VFV26_04125"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845381.1"
                     /translation="MILSLLLAASAPTAPALPEPFALVSGENPADALFRQGRDLRYAQ
                     RWYEAAQAYRSLIREFPASSRLADARYWLASSLEQDQRWDEAADAYTDFLSRHPDQRM
                     LGKEARLNRVRCWGMRQWDSPAAVAGLVEALAEDREDIRISAALQLAKRRDARAVPVL
                     QAGLRTGASSEACRLALQAMGVQPQAAGPAQGRFLVVRVKERAKAEALTVRLALGLAR
                     AVGGYLSD"
     gene            complement(676..1362)
                     /locus_tag="VFV26_04130"
     CDS             complement(676..1362)
                     /locus_tag="VFV26_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845382.1"
                     /translation="MTSAPDPNRLDATEEARCFDLLERPELWPDDPAQQAELAGLLEL
                     HLALGSHGPALAEGLAPAPRTRWTGSWTLAAAAVLLVALVPAAYTMQRIQSLRAQARD
                     TARLEQVARKRTQDRAWIAFFRQSTTLLQDFEQNPALCKKGEEDRRQEREMAMTLLEA
                     SHQLAAQGAPIQEAEAIRASLHTWLSEVAFEDSCLSTERARELRQWAAAHNLETQAER
                     MERRLRGEGA"
     gene            complement(1359..1955)
                     /locus_tag="VFV26_04135"
     CDS             complement(1359..1955)
                     /locus_tag="VFV26_04135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4845383.1"
                     /translation="MSAALPLPAGPGGGNAILEAESPEYWMAQLKAGREEALAHLMTR
                     FERPLFAFLHRRLQGEAGVVQELAQEVFLKCLQHCQRFEEGRPVAAWLFTLAANAATD
                     HLRRRGREVSPPETFDAPDPHQASPWESVDQSRRIQALRGALEGLTPRQRAMVLAYYV
                     HEHPVKRIALDLGCAEGTVKATLFQSLQKLRKTLGPQP"
     gene            complement(1952..>2374)
                     /locus_tag="VFV26_04140"
     CDS             complement(1952..>2374)
                     /locus_tag="VFV26_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845384.1"
                     /translation="ALAAEWISARAPFQGYFQPETLLGGLRRHAESSLLRDLPQGVHA
                     LFWSVTPSAEKDQPIRFELSVAGTPEGINQVAPWLQRLVAAANAVQSAPGAAPELMQE
                     KRRIGLRCAFTPEQLKLVMEKLGQPSFSFSTPGGGPKA"
BASE COUNT          332 a          767 c          916 g          359 t
ORIGIN      
        1 catcggagag gtagccgccc acggcgcggg cgaggcccag ggccagccgc acggtcaacg
       61 cctcggcctt ggcccgctcc ttcacgcgca ccaccaggaa gcggccctgg gcgggcccgg
      121 ctgcctgcgg ctggacgccc atggcctgga gcgccaggcg gcaggcttcc gatgaggcgc
      181 ctgtccgcag gccggcctgg agcacgggca cggcgcgggc atccctccgc ttggccagct
      241 ggagggcggc ggaaatgcgg atgtcttcgc gatcctcggc aagggcctcc acaagcccgg
      301 ccacggcggc gggactgtcc cactggcgca tgccccagca gcgcacccgg ttgagccgag
      361 cctctttgcc gagcatgcgc tggtcggggt gcctggacag gaagtcggtg taggcgtcgg
      421 cggcctcatc ccagcgctgg tcctgctcca ggctggaagc cagccagtag cgggcatccg
      481 ccaggcggga cgaggccggg aattcgcgga tcagggaccg gtaggcctgg gccgcctcgt
      541 accatcgctg ggcgtagcgc aggtcccggc cctgccggaa cagggcgtcg gcggggttct
      601 ccccggacac gagggcgaag ggttcgggca gggcgggcgc cgtgggcgcg gacgcggcca
      661 gcagaaggga caggatcatg cgccctctcc cctcaggcgg cgttccatgc gctcggcctg
      721 ggtttccagg ttgtgggcgg cggcccactg gcggagctcg cgggcccgtt cggtgctgag
      781 gcagctatcc tcgaaggcca cttcggacag ccaggtgtgc aggctggcgc ggatggcctc
      841 ggcctcctgg atgggcgcgc cctgggcggc gagctggtgg ctggcctcca ggagggtcat
      901 ggccatttcg cgctcctggc ggcggtcttc ttcgcccttc ttgcagaggg ctgggttctg
      961 ctcgaaatcc tggaggaggg tggtgctctg ccggaagaag gcgatccagg cgcggtcctg
     1021 ggtgcgcttc cgggccacct gctccagcct ggccgtatcc cgggcctggg cccggaggct
     1081 ctggatgcgc tgcatggtgt aggcggcggg aaccagggcc acaagcagca cggcggcggc
     1141 ggccagagtc caggagccgg tccagcgggt gcggggcgcg ggggccaggc cctcggccag
     1201 cgcggggccg tggctgccca gggccaggtg gagttccagc aggccggcca gctccgcctg
     1261 ctgcgcggga tcgtcgggcc agagttcggg ccgttcgagc agatcgaagc agcgggcctc
     1321 ttccgtggca tcaaggcggt tgggatcggg ggcggaggtc atggctgggg tccaagggtc
     1381 ttgcggagct tctggaggct ttggaacagg gtggctttca cggtgccctc ggcgcagccc
     1441 agatccaggg cgatgcgttt cacggggtgt tcgtggacgt agtaggcgag caccatggcc
     1501 cgctggcggg gggtcaggcc ctccagagcc ccgcgaaggg cctggatccg ccggctttgg
     1561 tccacggatt cccagggtga agcctggtgg gggtccggag catcaaaggt ctcgggaggg
     1621 gatacctctc gccctcgtct acgcagatgg tcggtcgccg cattagccgc cagcgtaaaa
     1681 agccaggcgg ccacgggccg gccctcctcg aagcgctggc agtgctggag gcatttgagg
     1741 aaaacctcct gggccagctc ctggacgacc ccggcctcgc cctggaggcg ccggtggagg
     1801 aaggcgaaga ggggccgttc gaagcgggtc atgagatggg ccagggcctc ttcccgcccg
     1861 gccttgagct gggccatcca gtactcgggt gattccgcct ccaggatggc gtttccgcca
     1921 cccggacccg cgggtagagg cagggccgcg ctcatgcctt ggggcctccg cccggagtgg
     1981 agaaggagaa gctcggctgg cccagcttct ccatgacgag cttgagctgc tcgggcgtga
     2041 atgcgcagcg cagaccgatg cgacgcttct cctgcatcag ttccggcgcg gcgccaggag
     2101 cggactgcac ggcgttggca gcggccacca ggcgttgcag ccagggcgcg acctggttga
     2161 tgccttcggg cgtgcccgcc acagacagtt cgaagcggat gggctggtcc ttctccgcag
     2221 acggcgtgac gctccagaag agggcgtgga cgccctgggg cagatccctg aggaggctgc
     2281 tttccgcatg gcgccgcagc ccacccagca gggtctcggg ctggaaatag ccctggaagg
     2341 gagcccgggc gctgatccac tctgcggcga gggc
//
LOCUS       DASUDT010000199         9289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1114378, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000199 DASUDT010000000
VERSION     DASUDT010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9289
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114378"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="VFV26_04145"
     CDS             <1..308
                     /locus_tag="VFV26_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845385.1"
                     /translation="ALATGDAAESFARRTPELRAALEQHELSAQWTAAIFGLLTVAWC
                     AYLGLSRFRRRGLPPGAVRTLFILWLLVSVMGVAALLRTGHLGGRMVHELRTHGGEP"
     gene            339..1553
                     /locus_tag="VFV26_04150"
     CDS             339..1553
                     /locus_tag="VFV26_04150"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmpG family muropeptide MFS transporter"
                     /protein_id="HEX4845386.1"
                     /translation="MKPRQLFTLILLGFASGLPLFLTGSTLKAWMTDEKLSLATIGLF
                     SFVTLPYSLKVFWAPFLDRFSLPGLGRRRGWMMLMQAGMALALALLALTQPHLDLLRV
                     VILALAVAVTSATFDIAVDAWRAEALEQKQLGLGNSIHIAAYRVAMLVSGGLAMILAQ
                     VFSWRVTYLGMAGLTLLGMVGTWLAMNTDSVARAPRTLQEAISGPLKDLLQRKGIGYL
                     LAFAVFYKLGDWLAESMTIPFLLRGMGFTKMEIGTVQKTTAMVAIILGGLIGGWMLTR
                     MSLRKALWICGFVQAGSILGFWAISLLGRHLPLLVAANTLENLAYGMGGSAFAALLMG
                     ACNRSYTGTQYALFSALMALPRTLFSGLTGFMADWYGWKLYFPICAAAAIPGLLLLLL
                     WDRWGLPEADGS"
     gene            complement(1795..2259)
                     /locus_tag="VFV26_04155"
     CDS             complement(1795..2259)
                     /locus_tag="VFV26_04155"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX4845387.1"
                     /translation="MSAIAQAVTTLRGWMEAYPFLPGLVFAVLCLILMFTVALPRILS
                     WRRAKGRPVLDPLQVEELLNGPGVLVVDLREDGPFRLGHIRGSLHVPFGDLPRRFETP
                     DPAAKRALVLVDDTDALSHRAFDLLQARGFTWIYVLKGGMRAWRAANRPVVK"
     gene            complement(2294..3274)
                     /locus_tag="VFV26_04160"
     CDS             complement(2294..3274)
                     /locus_tag="VFV26_04160"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX4845388.1"
                     /translation="MISLRAEDGAPRLDRFLADRFPEVPRARWDVHVRTGAIKVNGQP
                     VTKGGVKLRPGDLVETELPLAAPPAAHLEAEAIDLSSLFEDAHLWIVDKPTGMVVHPG
                     PGHAGGTIVNALLHRLKAPVILEPNDEEAEDAEELASGWPGLVHRLDRYTTGCLCLAK
                     TAEAQRAIQDQFKARTVEKRYLALVRHSPKLPQLGSLLIDEPIARHKRDRLRMVVAAG
                     GRSAQTRIRVLARTTSVALVECELLTGRTHQIRVHLAHLRAPLMGDPLYGGPGRWKDV
                     DGGALLLPHPALHAWKLSVDHPVTGARINAEAPIPEAFRALATALGLPQL"
     gene            complement(3271..4080)
                     /locus_tag="VFV26_04165"
     CDS             complement(3271..4080)
                     /locus_tag="VFV26_04165"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX4845389.1"
                     /translation="MHPVLFEIGSFPLGTYGLLLAIAFFAGTALAQRQARLDGLNPAA
                     ITDLAIAMLIAAILGSKLLMILVDLFSGAPLREVFSLATLRAGGAIHGGIIAATAVFF
                     WKLRKGQGLPLRLTGDALVPGVALGQAIGRLGCFSAGCCYGTESHLPWAVQFTHPLAH
                     AMGAPDFLVHPVQLYNTLANLAVMAILLVARGRRSFQGQIFALYFLVEGLGRVITETW
                     RGDVDRGTGWLGWAWLSTGRLTGLAFMMLGLGLWMFWNRRREAPASLKESR"
     gene            4167..5174
                     /gene="lpxD"
                     /locus_tag="VFV26_04170"
     CDS             4167..5174
                     /gene="lpxD"
                     /locus_tag="VFV26_04170"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEX4845390.1"
                     /translation="MTRTPTALTAQDLAERLGGSLDHCPPDRLISEVKPLEEAGAGSV
                     SFLANPKYAAKAKESPAGLILADPAADLGDRPVLRVKHPYWAFAQAIGWLHPEPAPEW
                     GGVPVHPTALIGDGCRLAPSATVGARTVLGKGCVLHPGAHVGDDCVLGEGCELFPGAV
                     LYRRTRLGNRVAVHANSVVGSDGYGYVLVAGRHEKIPQVGWVEVGDDVEIGACVCIDR
                     GVLGPTRIGTGTKIDNQVQVAHNVQVGSHCLLVAQSGVSGSTKLGDYVTLAGKVGVIG
                     HIEIGSRSVVGGNSVVAKSLPEGSFVTGFPARPHREWTEAQAALNRLPRLMKQLRSKT
                     P"
     gene            complement(5209..7863)
                     /locus_tag="VFV26_04175"
     CDS             complement(5209..7863)
                     /locus_tag="VFV26_04175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845391.1"
                     /translation="MHRSFALRLSLLFLPVAILVGGMAWLGYGIESARRHSDHGTRER
                     ARLLAGTITIAAGLESVRGDLRYLAGHEALLKVLEGGDAQALRHTARDWLQFSRSKPV
                     YDQIRWLDEEGMERLRINLGQGSPAVVPPAELQTKADRYYFREAMALEPGEVFVSPLD
                     LNVENGQIERPFKPTLRLATPLRDAHGRKRGIVVLNYLGAPLLALYAGAASNHMNQAW
                     LLNSEGYWLKGTDPADEWGFMFGRSDRALPARHPEAWKRMSGRDQGQFTTAEGLWTFR
                     AFRPFQDGAAPTATTRTKANPPLLMAVSLVPSPLFEKGLREFGTILGGSAFLALSLWL
                     LGSWRLVRARIAEETLRTSLEERVAQRTRTLDEKNLELTESIAEQRRIMAESLRLWEA
                     IDQAAESVMITDTAGIIQYVNPAFTTITGYSSQEAVGSPPSLLKSGRHEPAFYREIWD
                     TLLTNRVWKGRITNRRKDGKLITADTTISPVLDERGEILNFVSVSQDVTGELELELQF
                     RQAQKMDAIGRLAGGVAHDFNNLLVPILVNCDLILGRPDLDADTARSVGQIAEAGERA
                     KRIVQQLLAFSRKQTLVLEPTDLNQVVTRFNSLLRRIIREDIEIRTQLDERLPPVVAD
                     GGQMEQVIMNLAVNAQDAMPQGGLLILATGLADLDETYTRTHPGVSPGRYAMLSVSDT
                     GMGMDPETCQKIFEPFFTTKEKAKGTGLGLSTVFGIVQQHKGSIWAYSEPGHGSVFKV
                     YLPMAEGAVPAPAHPSPPTNFRGTETILVVEDDDGVRDLAARILEGQGYSVLTARDGR
                     EALDLVAEVGPAIQLLLADVILPGMNGRELYRRAAERSPDLKILYMSGYTDSVIGNHG
                     VLEGGTHFLQKPFSIGSLLAKVREALEA"
     gene            complement(7971..8849)
                     /locus_tag="VFV26_04180"
     CDS             complement(7971..8849)
                     /locus_tag="VFV26_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845392.1"
                     /translation="MNPVQLTPAILASLRIPAAAAPSAAALLKAMVGQALEATLEAAG
                     ADGLHLRLADGKELVAQGSLPYPAGTALALKALPLPAGAGIQLQVVRATPPPASPLLQ
                     PLVQGEAAPLLARLQSPAAAMEPLAALFRTLAGMADQPEAWSTWMKEAIRTLADPAAS
                     PAESAFHRLQAKEGTGWFELPLPWAVGAEPLRLWVETDQEGGREAGDPVHRVFLSVPF
                     SALGDVRLGLEQRASGLRARLWLKDPSQLVPLREALEAELASLGRPVDLQILPLPDGA
                     PDLRAMAGGASLSALG"
     gene            complement(8849..>9289)
                     /locus_tag="VFV26_04185"
     CDS             complement(8849..>9289)
                     /locus_tag="VFV26_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheB methylesterase domain-containing protein"
                     /protein_id="HEX4845393.1"
                     /translation="PFADRLDGICQVHVKEAEQGEPLKAGTVYIAPGGIHMTYGARGP
                     KGCIDLSPEPVSSLHRPSVDVLFLSVAELFRGQAFAGILTGMGSDGAKGMEQMKRKGA
                     YTLSEAEETCVVYGMPRAAFERGCIDTVAPLPEIAGHIRRHFRI"
BASE COUNT         1369 a         3064 c         3419 g         1437 t
ORIGIN      
        1 cagccctggc cacgggcgat gcggcggaat ccttcgcccg gaggactccg gagctgagag
       61 ccgccctgga gcagcatgag ctgtcagccc agtggactgc ggccatcttc gggctcctga
      121 cggtggcttg gtgcgcctac ctggggctgt cccgcttccg ccgccgcggc cttccgccgg
      181 gcgcggtcag gaccctcttc atcctctggc tgctggtcag tgtcatgggc gtcgccgcgc
      241 tgctccgcac ggggcacctg ggcggccgca tggtccacga gctgcgcacg cacgggggcg
      301 aaccctgagt cgtcgatgac ttcggttagg ctggtgggat gaagccccgc cagctcttca
      361 cgctcatcct cctgggcttc gcctcgggcc ttccgctctt cctcacgggc tcgacgctga
      421 aggcctggat gacggacgag aagctgagcc tggccaccat cggcctcttc agcttcgtga
      481 cgctgcccta cagcctgaag gtgttctggg cgcccttcct ggaccggttc tccctgccgg
      541 gcctcggacg gcggcggggc tggatgatgc tcatgcaggc gggcatggcc ctggccctgg
      601 cgctgctggc cctcacccag ccgcacctgg atctcctgcg cgtggtgatc ctggccctgg
      661 cggtggccgt caccagcgcc accttcgaca tcgccgtgga tgcgtggcgc gccgaggccc
      721 tggagcagaa gcagctgggc ctgggcaaca gcatccacat cgccgcctac cgcgtggcca
      781 tgctggtgag cggcggactg gcgatgatcc tggcccaggt cttcagctgg cgggtcacgt
      841 acctgggcat ggccgggctc acgctgctgg gcatggtggg cacctggctg gccatgaaca
      901 cggacagcgt ggcccgggcg ccccgcacgc tgcaggaggc catctcgggg cccctgaagg
      961 acctgctcca gcgcaagggc atcggctacc tgctggcctt cgccgtgttc tacaagctgg
     1021 gggactggct ggcggaatcc atgaccatcc ccttcctgct gcggggcatg ggcttcacga
     1081 agatggagat cggcaccgtg cagaagacca ccgccatggt ggccatcatc ctgggggggc
     1141 tcatcggcgg ctggatgctc acccgcatga gcctgcgcaa ggcgctgtgg atctgcggct
     1201 tcgtgcaggc gggcagcatc ctgggcttct gggccatctc cctgctgggc cgccacctgc
     1261 ccctgctggt ggccgcgaac accctggaga acctggccta cggcatgggc ggcagtgcct
     1321 tcgcggccct gctcatgggg gcctgcaacc gcagctacac cggcacccag tacgccctgt
     1381 tcagcgccct catggccctg ccgcgcaccc tgttctccgg gctcacgggc ttcatggccg
     1441 actggtacgg ctggaagctc tacttcccca tctgcgccgc cgccgccatt ccgggtctgc
     1501 tgctgctgct gctgtgggac cgctgggggc tgccggaggc ggacggcagc tgacctattc
     1561 cgactcgctt tcgatggtga aggatccacc acggagacac ggggcatggg cacacgggag
     1621 gcgccgggtc cggatccttc atggggcatc cgaacccggt gcctcccgtg gcttccggca
     1681 gagccggaag cggcctccgg cctgcccatg atggaggatc acggagagct ccgtgttccc
     1741 tttgtggcct cagtgcctcc gtggtgaatc gctatctttg aatgcgattt cgcattactt
     1801 caccaccggg cggttcgcgg cgcgccaggc ccgcatgccg cccttgagga cgtagatcca
     1861 ggtgaagccc cgggcctgga ggagatcgaa ggcgcggtgc gagagggcat cggtgtcatc
     1921 caccaggacc agggcgcgct tggccgcggg atccggggtc tcgaagcgcc gggggaggtc
     1981 gccgaagggg acgtggaggc tgccccggat gtgccccagg cggaaggggc cgtcctcccg
     2041 gaggtccacc accaggacgc cagggccgtt caggagctcc tcgacctgca ggggatccag
     2101 cacgggccgg cccttggcgc gccgccagga gaggatccgc ggcaaagcca ccgtgaacat
     2161 gaggatgaga cataggactg cgaaaaccag gcccggcagg aagggatagg cttccatcca
     2221 gcccctcagt gtcgtcacgg cctgcgcgat ggcggacatg gctcctcccc tgtacgggga
     2281 tgatgcgccc gcctcagagc tggggcaagc ccagggcggt ggccagggcc cggaaggcct
     2341 cggggatggg ggcctctgcg ttgatgcggg cgcccgtcac cgggtggtcc acggacagct
     2401 tccaggcatg cagggcgggg tggggaagca ggagtgcccc accgtccaca tccttccagc
     2461 ggccggggcc gccgtagagg gggtcgccca tgagtggggc gcggaggtgg gccaggtgca
     2521 cgcggatctg gtgcgtgcgg cccgtgagca gttcgcactc caccagggcc acgctggtgg
     2581 tgcgggccag cacgcggatg cgggtctgcg cggagcggcc gcccgcggcc accaccatgc
     2641 gcaggcggtc ccgcttgtgg cgggcgatgg gttcgtcgat gaggaggctg cccagctggg
     2701 gcagcttggg ggaatggcgc accagggcca ggtagcgctt ttccacggtg cgggccttga
     2761 actggtcctg gatggcgcgc tgggcctcgg cggtcttcgc gaggcagagg cagccggtgg
     2821 tgtagcggtc caggcgatgc acgagtcccg gccagccgga ggccagctcc tcggcgtcct
     2881 ccgcttcctc gtcattgggc tcgaggatca cgggcgcctt gaggcggtgc agcagggcgt
     2941 tgacgatggt gccgccggcg tggccggggc cgggatgcac caccatgccc gtgggcttgt
     3001 ccacgatcca caggtgggcg tcctcgaaga ggctggacag gtcgatggcc tcggcttcca
     3061 ggtgggccgc ggggggcgcg gccagcggga gctccgtctc caccaggtcg cccgggcgca
     3121 gcttcacgcc gcccttggtg acgggctgcc cattcacctt gatcgccccc gtgcggacgt
     3181 ggacatccca gcgggcccgg ggaacctcgg gaaagcggtc ggccaggaag cggtccagac
     3241 ggggggcgcc atcttcggcg cgcaggctga tcatcgagac tccttgaggg atgccggggc
     3301 ttccctgcgg cggttccaga acatccaaag gcccaggccc agcatcatga aggccaggcc
     3361 cgtgaggcgg cccgtgctga gccaggccca gcccagccag cccgtgcccc ggtccacatc
     3421 gccccgccag gtctcggtga tgacgcggcc caggccctcc accaggaagt agagggcgaa
     3481 gatctggccc tggaacgagc gcctgccgcg ggccaccagg aggatggcca tcacggcgag
     3541 gttggcgagg gtgttgtaga gctgcacggg atggacgagg aagtccggtg cgcccatggc
     3601 atgggcaagg gggtgggtga actgcacggc ccagggcagg tggctttcgg tgccgtagca
     3661 gcagccggcg gagaaacagc ccaggcggcc gatggcctgg cccagggcca cgccgggcac
     3721 cagggcgtcg cccgtgaggc gcaggggcag gccctggccc ttgcggagct tccagaagaa
     3781 caccgccgtg gcggcgatga tgccgccgtg gatggcgcca ccggcccgca gggtggcaag
     3841 ggagaagacc tcgcggaggg gcgcgccgct gaagaggtcc accaggatca tgagcagctt
     3901 ggagcccagg atggctgcga tgagcatggc gatggccagg tcggtgatgg cggccgggtt
     3961 caggccgtcc aatctggcct ggcgctgggc cagggccgtg cccgcgaaga acgcgatggc
     4021 cagcagcagc ccgtaggtgc ccagggggaa cgaaccgatt tcaaagagga ctgggtgcat
     4081 ggtcgggggt ccggatggtc tgatgatcag aggactggaa acggaaggct gaaggctgaa
     4141 gactgaagga tgacgaggag agccccatga cgcgcacccc aacggccctg acggcgcagg
     4201 atctggcgga gcgtctgggc ggcagcctcg accattgtcc cccggatcgc cttatttccg
     4261 aagtgaagcc gctggaggag gctggcgctg gttccgtgtc cttcctggcc aaccccaaat
     4321 acgcggccaa ggccaaggag agccccgcgg ggctgatcct ggcggatccc gccgccgacc
     4381 tgggggatcg ccccgtgctg cgggtgaagc atccctactg ggccttcgcc caggccatcg
     4441 gctggctgca cccggaaccg gcgcccgaat ggggcggagt tccggtgcat cccacggccc
     4501 tgatcgggga cggctgccgc ctcgcgccca gcgccacggt gggggcccgc acggtgctgg
     4561 ggaagggctg cgtgctgcac ccgggcgccc atgtgggcga tgactgcgtg ctgggcgagg
     4621 gctgcgagct gttccccggc gcggtgctct accgccgcac gcgcctgggg aaccgggtgg
     4681 ccgtgcacgc caattccgtg gtgggcagcg acggctacgg ctacgtgctg gtggcgggcc
     4741 gccacgagaa gatcccccag gtgggctggg tggaggtggg cgatgacgtg gagatcggcg
     4801 cctgcgtctg catcgaccgc ggcgtgctgg gccccacccg catcggcacc ggcaccaaga
     4861 tcgacaacca ggtgcaggtg gcccacaacg tccaggtggg gagccactgc ctgctggtgg
     4921 cccagtcggg cgtcagcggc tccacgaagc tgggcgacta cgtgaccctg gcgggcaagg
     4981 tgggcgtcat cggccacatc gagatcggca gccgcagcgt ggtgggcggc aacagcgtgg
     5041 tggccaagag cctgccggag ggcagcttcg tcacgggctt cccggcccgg ccccacaggg
     5101 agtggaccga ggcccaggcc gccctgaacc gcctgccgcg gctcatgaag cagctgcgga
     5161 gcaagactcc ctgaggactc ctgaggtttc ggggccgggg ttgcggattc aggcctccag
     5221 ggcctcccgg accttcgcca gcagactccc gatggagaag ggcttctgga ggaagtgggt
     5281 tcccccctcc aggacgccgt ggttcccgat cacgctgtcc gtgtagccgg acatgtagag
     5341 gatcttgaga tccggggacc gctccgccgc gcggcggtac agctcccggc cgttcatgcc
     5401 tgggaggatc acgtcggcca ggagcagctg gatcgcgggc cccacctctg ccaccaggtc
     5461 cagggcctcc cggccgtcgc gggccgtgag taccgagtac ccctgtccct cgaggatcct
     5521 ggcggcgagg tcgcgcacgc cgtcgtcatc ctccacgacc aggatggttt cagtgccccg
     5581 gaagttcgtc ggaggtgatg gatgggccgg ggccggcacc gcaccctcgg ccatggggag
     5641 gtagaccttg aacacgctcc cgtgccccgg ttcgctgtag gcccagatgc tgcccttgtg
     5701 ctgctggacg atgccgaaca ccgtggacag cccgagtccg gtccccttgg ccttttcctt
     5761 ggtggtgaag aagggctcga agattttctg gcaggtctcg gggtccatgc ccatgccggt
     5821 gtcgctgacc gaaagcatgg cgtagcggcc cggcgagact ccggggtgtg ttcgggtgta
     5881 ggtttcatcc aggtccgcca gacccgtggc gaggatcaag agcccgccct ggggcatggc
     5941 atcctgggca ttgacggcca ggttcatgat gacctgttcc atctggcctc cgtcggccac
     6001 cacggggggg aggcgctcgt ccagctgggt ccgtatctcg atgtcctcgc ggatgatcct
     6061 cctcagcagc gagttgaagc gcgtgacgac ctgattgagg tctgtcggtt cgagcacgag
     6121 ggtctgcttc cggctgaagg ccaggagctg ctggacgatc cgcttcgccc gctcaccggc
     6181 ctcggcgatc tgcccgaccg aacgggccgt gtcggcatcg agatccggcc tccccaggat
     6241 caggtcacag ttgaccagga tcgggacgag caggttgttg aagtcgtggg ccacccctcc
     6301 ggccaggcgg ccgatggcgt ccatcttctg ggcctggcgg aactgcaact ccagttccag
     6361 ctccccggtg acgtcctggc tcacggacac gaagttcagg atctcccccc gttcgtcgag
     6421 gacaggcgag atggtggtgt ccgcggtgat gagcttgccg tccttccggc ggttggtgat
     6481 gcggcccttc cagacccggt tcgtgaggag cgtgtcccag atctcccggt agaaggccgg
     6541 ctcgtgcctc ccgctcttga gaagactggg gggcgatccc acggcctcct gggaggagta
     6601 ccccgtgatg gtcgtgaacg cggggttcac atactggatg atgccggcgg tgtccgtgat
     6661 catcacggac tcggcggcct ggtcgatggc ttcccagagc cgcaagctct cggccatgat
     6721 tcggcgctgc tcggcgatgc tctcggtcag ctcgaggttc ttctcgtcga gggttcgggt
     6781 gcgctgggcc acccgctcct cgaggctggt ccggagggtc tcctcggcga tccgcgcccg
     6841 gactagcctc caggatccga ggagccacag tgagagggcg aggaaggctg acccgcccag
     6901 gatcgtcccg aactccctca ggcccttctc gaacagggga ctgggtacca gggagacggc
     6961 catcaagagc ggaggattcg ccttcgtccg ggtcgtggcc gtgggggccg ctccgtcctg
     7021 gaaggggcgg aaggcacgga aggtccacag cccttccgca gtcgtgaact ggccctggtc
     7081 cctgccggac atccgcttcc aggcctcggg atggcgggcc ggaagggcgc ggtcggaccg
     7141 gccgaacatg aacccccatt cgtccgcggg gtccgtgccc ttcagccagt agccctccga
     7201 gttcaggagc caggcctggt tcatgtggtt gctggccgcc cccgcataga gggccagcag
     7261 gggcgctccg aggtagttga gcaccacgat gccgcgcttc cgcccgtgcg cgtcgcgcag
     7321 cggggtcgcc aggcgaaggg tgggcttgaa gggccgctcg atctggccgt tctcgacgtt
     7381 cagatccagg ggggagacga agacctcgcc cggttccaga gccatggcct ccctgaagta
     7441 gtagcgatcg gccttggtct ggagttcggc tgggggcacg accgcgggcg aaccctggcc
     7501 gaggttgatg cgaaggcgct ccatgccctc ttcgtcgagc cagcggatct ggtcatagac
     7561 cggcttggaa cgggagaact ggagccagtc ccgggcggtg tggcgcaagg cctgggcatc
     7621 gccgccctcc aggaccttga gcagggcctc gtggcccgcc aggtagcgca ggtccccccg
     7681 gacggactcg agcccggcgg cgatcgtgat ggtaccggcg agcagccggg cgcgctcgcg
     7741 ggtgccatgg tcggaatggc gccgggcgga ttcgatcccg taccccagcc aggccatgcc
     7801 tcccaccagg atcgccacgg gcaggaacag gagcgacagg cggagcgcga acgaccggtg
     7861 catgggcttc ccatccctcg tacattccga ttcggttgcg gggaagccta gcatggtccc
     7921 cgccacgcga gggaggctgg aatccccagg gcggggggcc ccggcccgga tcagccgagg
     7981 gctgagagcg aggctccgcc cgccatggcc cgcaggtccg gcgcgccgtc gggcaggggc
     8041 aggatctgga ggtccacggg gcggcccagg gaggccagtt ccgcttccag ggcctcccgc
     8101 aggggaacga gctgcgaagg atccttcagc cagagccggg cccgcaggcc gctggcgcgc
     8161 tgctccaggc ccaggcgcac atcgcccaga gcgctgaagg gcacgctgag gaagacgcgg
     8221 tggaccggat cccccgcctc gcggccgcct tcctgatccg tttcgaccca gagccggagc
     8281 ggttccgcac ccacggccca gggcaggggc agttcgaacc agccggtgcc ctccttggcc
     8341 tggagacggt ggaaggccga ttccgcgggc gaggccgccg ggtccgccag ggtccggatg
     8401 gcctccttca tccaggtgga ccaggcttca ggctggtctg ccatgcccgc cagggtgcgg
     8461 aacagggcgg ccaggggctc catggccgcc gccggggact ggagccgggc cagcaggggg
     8521 gccgcctcgc cctggaccag gggctgcagc aggggcgagg cggggggcgg cgtggcgcgg
     8581 accacctgga gctggatgcc cgcgcccgcg ggcaggggca gggccttgag ggcgagggca
     8641 gtgccggccg ggtagggcag gctgccctgg gccaccagct ccttgccgtc cgccaggcgc
     8701 aggtgcaggc catcggcccc ggcggcttcc agcgtggcct cgagggcctg gcccaccatg
     8761 gccttcagga gggcggcggc cgaaggcgcc gcggccgccg ggatcctcag ggaggcgagg
     8821 atcgcaggag tgagctggac cgggttcatc agatccggaa gtggcggcgg atgtggccgg
     8881 cgatctccgg caggggcgcc acggtatcga tgcagccccg ctcgaaggcg gcccgcggca
     8941 tgccgtagac cacgcaggtc tcctcggcct ccgacagggt gtaggcgccc ttgcgcttca
     9001 tctgctccat gcccttggca ccgtcggagc ccatgcccgt caggatgccg gcgaaggcct
     9061 ggccgcggaa cagttcggcc acgctgagga agagcacatc gacgctgggc cggtggaggg
     9121 aggacacggg ctcggggctc aggtcgatgc agcccttggg gccgcgggct ccgtaggtca
     9181 tgtggatgcc cccgggcgcg atgtagaccg tgccggcctt caggggttcc ccctgttcgg
     9241 cctccttcac gtgcacctgg cagatcccgt ccaggcggtc tgcgaaggg
//
LOCUS       DASUDT010000200         2733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1953563, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000200 DASUDT010000000
VERSION     DASUDT010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1953563"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VFV26_04190"
     CDS             complement(<1..882)
                     /locus_tag="VFV26_04190"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX4845394.1"
                     /translation="MTHSPHRVVVTGLGLVSSLALDREGPWSAMLAGRDGLGPLTRLH
                     LPLEPAQIAGQVPLEPLRHQTLCERMALLALEEALGGFQSGGDPARIGVFQGAGTSGL
                     PVAEAYLEDRLAGRRGRAAEPAHQGPCTVTDALARRLGAEGPRSTIMNACSSSLLALG
                     QAWERLAAGELDLAVAGSAESLCRTTYGGFSSLKAVDPAKCRPFSRDRAGLNLGEGAV
                     QLLLEPLDLALARGATIFAEVLGYGASMDAHHPTAPHPEGEGAARAMAMALRTGRRLP
                     AEVDLVSAHGTATPANDG"
     gene            complement(879..1286)
                     /gene="fabZ"
                     /locus_tag="VFV26_04195"
     CDS             complement(879..1286)
                     /gene="fabZ"
                     /locus_tag="VFV26_04195"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:NF000582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX4845395.1"
                     /translation="MTDIPAHLPHRYPFLLVDRVLERVPGLRVVAEKLVTNSEPYLQG
                     HFEGRPLVPGVLLLEMLAQAGGFLEAEPLHGAAIFLAGVQDARFKAPALPGDRLRLEV
                     TAEGAFAGLMKLKGAVSCDGRSLCTATLLVKRL"
     gene            complement(1291..1548)
                     /locus_tag="VFV26_04200"
     CDS             complement(1291..1548)
                     /locus_tag="VFV26_04200"
                     /inference="COORDINATES: protein motif:HMM:NF006617.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEX4845396.1"
                     /translation="MTDLKLRVKEMIIERLKLEGMAPDQIEDQAPLFGDGLGLDSIDA
                     LELVLGIEQVFGVKIEDEAAGMKAFKSVQALTDFIAEHRKA"
     gene            1688..2068
                     /locus_tag="VFV26_04205"
     CDS             1688..2068
                     /locus_tag="VFV26_04205"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX4845397.1"
                     /translation="MAHPASPFLPILILLLVAAVTAIAILVLSGKVLPLLKPNNPQEA
                     KMRPYECGVAPLQAGARHKYSVKFYLTAMLFILFDVEAAFLLPWAVNFKQALWTFVPM
                     LSFMATLLVGFVYAWGKGAFEWER"
     gene            2070..2678
                     /gene="nuoB"
                     /locus_tag="VFV26_04210"
     CDS             2070..2678
                     /gene="nuoB"
                     /locus_tag="VFV26_04210"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEX4845398.1"
                     /translation="MSEMNINDAVVTTRLDAVVNWGRKNSLWPLPFGTACCAIEFMSM
                     MASKYDMSRFGAEAMRFSPRQSDMMLILGTITNKMAPVLRTIYAQMAEPKWVVSVGVC
                     ASSGGMYRTYATLQGVDRIIPVDVYVPGCPPRPESMIYGVMKLQEKIEKESLSMRKDH
                     IARFYESLARQEAIQAEKGLTGQQTIREMLLDAAEHGAGTIF"
BASE COUNT          422 a          940 c          965 g          406 t
ORIGIN      
        1 gccgtcattg gccggggtgg cggtgccgtg ggcggagacc agatccacct ccgcgggaag
       61 ccggcgcccg gttcgcagcg ccatggccat ggcccgggcg gcgccctcgc cctcgggatg
      121 cggggccgtg gggtggtggg cgtccatgct ggcgccgtag cccagcacct cggcaaagat
      181 ggtggcgccc cgggccaggg cgaggtccag gggttccagc aggagctgca cggcgccctc
      241 ccccaggttc aggcccgcgc ggtcgcggct gaaggggcgg cacttcgcgg ggtccacggc
      301 cttgaggctg gagaacccgc cgtacgtggt gcggcacagg ctttcggcgc tccccgccac
      361 ggccagatcc agttcgcccg cggccaggcg ttcccaggcc tggcccaggg ccagcaggct
      421 ggaggagcag gcgttcatga tggtgctgcg ggggccttcg gcgcccaggc gccgggccag
      481 ggcatcggtg acggtgcagg ggccctggtg ggcgggctcc gcggcgcggc cccggcgccc
      541 ggccaggcgg tcctccaggt aggcctccgc cacgggcagg ccgctggtgc ccgcgccctg
      601 gaagacgccg atgcgtgccg gatcgccgcc ggactggaag ccgcccaggg cctcctccag
      661 ggccagcagg gccatgcgct cgcagagggt ctggtgccgc aggggctcca ggggcacctg
      721 cccggcgatc tgggcgggct ccaggggcag gtggaggcgc gtcaggggcc ccaggccatc
      781 ccgccccgcc agcatggcgg accaggggcc ctcccggtcc agggccaggg aggacaccag
      841 gccgagaccc gtgaccacga cgcggtgcgg ggagtgggtc ataggcgctt caccagcagg
      901 gtggccgtgc agaggctgcg cccgtcgcag ctcacggcgc ccttgagctt catcaggccc
      961 gcgaaggcgc cttcggcagt cacctccagg cgcaggcggt cgcccgggag ggccggggcc
     1021 ttgaagcggg cgtcctgcac cccggccagg aagatggcgg ctccgtgaag cggctcggcc
     1081 tccaggaaac ccccggcctg ggccagcatc tccagcagca gcacgccggg caccaggggg
     1141 cgcccctcga agtggccctg aaggtagggc tcactgttcg tgacgagctt ctcggccacc
     1201 acgcgcaggc ccggcacccg ttccagcacc cggtccacca gcaggaacgg gtagcggtgg
     1261 ggcaggtggg ccgggatgtc ggtcatgggg tcaggctttg cggtgctcgg cgatgaagtc
     1321 cgtgagggcc tgcacggact tgaaggcctt catgcccgcg gcctcgtcct cgatcttcac
     1381 cccgaagacc tgctcgatgc ccagcaccag ctccagggcg tcgatggaat ccaggcccag
     1441 gccgtccccg aagagggggg cctggtcctc gatctggtcc ggggccatgc cttcgagctt
     1501 caggcgctcg atgatcatct ctttgacgcg cagcttgagg tcggtcatga caatcccggc
     1561 agaagggtgg ggagattgat tctatcccta acgggagacc ccggtggggt tgtgatattg
     1621 gcacggtttc gggatctgca aagggcgcta agctggaccc tcgcggaacc ctccgcccga
     1681 gagcgccatg gcccatcccg catcgccttt cctgccgatc ctgatcctgc tgctggtcgc
     1741 cgccgtgacc gccatcgcca tcctcgtgct gtcggggaag gtgctgcccc tgctgaagcc
     1801 gaacaatccc caggaagcca agatgcggcc ctacgagtgc ggcgtggcgc ccctgcaggc
     1861 aggcgcccgg cacaagtact ccgtgaagtt ctacctgacg gccatgctct tcatcctgtt
     1921 cgacgtggaa gcggcgttcc tgctgccctg ggccgtcaac ttcaagcagg ccctctggac
     1981 cttcgtgccg atgctgagct tcatggccac ccttctggtg ggcttcgtct acgcctgggg
     2041 caagggcgcc ttcgagtggg agcgctgaga tgtccgagat gaacatcaac gacgcggtgg
     2101 tgaccacccg cctggatgcg gtggtgaact ggggccgcaa gaacagcctc tggccgctgc
     2161 ccttcggcac cgcctgctgc gccatcgagt tcatgagcat gatggcgtcg aaatacgaca
     2221 tgagccgctt cggcgccgag gccatgcgct tcagcccccg ccagagcgac atgatgctga
     2281 tcctcggcac catcaccaac aagatggcgc cggtgctgcg cacgatctac gcccagatgg
     2341 ccgagcccaa gtgggtggtc agcgtgggcg tctgcgcctc ctcgggcggc atgtaccgca
     2401 cctacgcgac cctgcagggc gtggaccgca tcatccccgt ggacgtctac gtccccggct
     2461 gcccgcctcg ccccgagagc atgatctacg gcgtgatgaa gctgcaggag aagatcgaga
     2521 aggaatccct ctccatgcgc aaggaccaca tcgcccgctt ctacgaaagc ctggcgcggc
     2581 aggaggccat ccaggccgaa aagggcctca cgggccagca gaccatccgc gagatgctgc
     2641 tggacgcggc cgagcacggc gcgggcacga tcttctaggc gggacggacc atgatcatcg
     2701 agcacatcga cgcacagctg ccgggcgcca tca
//
LOCUS       DASUDT010000201         5066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_76215, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000201 DASUDT010000000
VERSION     DASUDT010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5066
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76215"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VFV26_04215"
     CDS             <1..244
                     /locus_tag="VFV26_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845399.1"
                     /translation="KRYVVNATISPALAAGSAVDLDLPFLNRTFTFTGPGGSFPGTVL
                     TVNNTAPVYHPVRVRLRSPAAVQPDVIVTVAFIPSL"
     gene            264..1079
                     /locus_tag="VFV26_04220"
     CDS             264..1079
                     /locus_tag="VFV26_04220"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEX4845400.1"
                     /translation="MTASAALQALRARAPFVPELAVVLGSGLGALADSPEARAGLSIP
                     FTDLPGFPAPTVAGHGGKLVFCEFEGRKVVLQAGRFHFYEGHPMPLVVTPMRLYGRLG
                     VKAVLLTNAAGALNPEFGVGDLMALTDHINLFGTNPLIGPNVEPGPRFPDMTAVYDPA
                     FRAHLTACAAGLGQTLRQGVYLGLTGPSYETPAEIRAFRVMGADAVGMSTVPEAIVAR
                     HEGMRVAGISCLCNMAAGILPQALTHQEVLEAGAAAAGRFEALVRAFVRDLPL"
     gene            complement(1193..3145)
                     /gene="acs"
                     /locus_tag="VFV26_04225"
     CDS             complement(1193..3145)
                     /gene="acs"
                     /locus_tag="VFV26_04225"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001208.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX4845401.1"
                     /translation="MSEDLFPVKPHIRERAHIKTMEEYQRLYRLSLDNPEWFWGEQAK
                     TLTWFHPWQSVFDADYKEVDFSWFSGGRLNACFNCVDRHLPHLGDKTALIWAQDEPGV
                     YTHITYRDLKHNVARVANVLLHNGVQKGDRVCIYLTMIPELVYTMLACARIGAVHSVV
                     FGGFSAESLRDRIVDARCKVVVTANEGLRGGKRVPLKRTVDRAIEGMSLVECVLVARR
                     TDGDVPMQPGRDLWLDEETAKQRSTCTNEWMGAEDPLFILYTSGSTGKPKGLLHTTGG
                     YLTYAAFTHKLVFDYHPEDIYFCAADIGWVTGHSYIVYGPLANGATSVIFESTPLYPD
                     ATRYWQIIDDLGVTIFYTAPTALRALAQAGDEWVKKSSRKSLRVLGTVGEPINPEVWR
                     WYHDVVGEGRCTVVDTWWQTETGGILITPLPGVTPTKPGSATLPFFGVKPVIVDPATG
                     VPLEGNDVSGALCLGAPWPGQARTVHGDHKRFRETYFTQYPGYYFTGDGARRDEDGYY
                     WITGRIDDVINVSGHRLGTAEVESALVAHEAVAEAAVVGYPHPIKGQGIYCYVLLNHG
                     YAENGNQQLIGALKEQVRQVIGAFAAPDVIHIASGLPKTRSGKIMRRILRKIASTEYD
                     GMGDISTLAEPDVVSRLIEEHQKNPH"
     gene            complement(3284..4945)
                     /locus_tag="VFV26_04230"
     CDS             complement(3284..4945)
                     /locus_tag="VFV26_04230"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845402.1"
                     /translation="MAIATEQVATKTPLTKEERMVIVASSVGTVFEWYDFYLYATLAP
                     FFATLFFPKGNETAALLSAFAAYAAGFLVRPFGALVFGRIGDLIGRKYTFLVTIVVMG
                     LSTFGVGLLPTFATIGWWAPIIMVTLRLLQGLALGGEYGGAATYVAEHSAHDRRGYNT
                     SWIQTTATVGFFLCLGIILGCRSAMTKEAFSSWGWRIPFWMSIFLLGVSVWIRLKLHE
                     SPVFTKMKSEGKTSKAPLSDSFLKYPNNKYALLALLGATAGQGVVWYTGQFYALFFMQ
                     ITLKLDYQTTYMLIGASLLLGTPFFIFFGWLSDKIGRLKIILAGCLIAALTFFPLFKA
                     LTHYVNPALETFQNTTVITVAGNPKDETFNLFVGPWSKFTELDRVNDFFGKQGLNFNK
                     VGPEAGKMVVATIEGKNPVTGQFTTTRVEGWNAASEAALKQALDSLGYPKEADKSKVN
                     YPMTLLILFIMLIYVTMVYGPIAAFLVELFPTNIRYTSMSLPYHIGNGWFGGMLPLIA
                     TAIVALKGNIYYGLWYPIIVALVTVVIGALFLKETKDRDISTYQH"
BASE COUNT          815 a         1596 c         1775 g          880 t
ORIGIN      
        1 caagcggtat gtggtcaacg ccaccatttc gccggcgctg gcagccggga gcgccgtgga
       61 cctcgacctg cccttcctca accggacctt caccttcacg gggcccggag gctctttccc
      121 gggcaccgtc ctcacggtca acaacacggc gccggtctac caccccgtgc gggtccgcct
      181 gcggagtccc gcggccgtgc agccggatgt gatcgtgacc gtagccttca ttccgagcct
      241 ttgacccgcg cccaggacct gccatgaccg cttctgccgc cctccaggcc ctgcgggccc
      301 gggctccttt cgttccggaa ctcgccgtgg tcctgggctc gggcctgggg gccctggccg
      361 acagtcccga agccagggcc ggcctgtcca tccccttcac ggatctgccg ggcttccccg
      421 cccccacggt ggcgggtcat ggcggcaagc tggtcttctg cgagttcgag ggccgcaagg
      481 tcgtgctgca ggccggccgc ttccatttct atgaggggca ccccatgccc ctggtggtca
      541 cccccatgcg cctctacgga cggctgggcg tgaaggccgt gctgctcacc aatgcggcgg
      601 gcgccctcaa ccccgaattc ggggtgggtg atctcatggc cctcacggac cacatcaacc
      661 tcttcggcac caaccccctc atcggcccca atgtggagcc gggcccccgg ttcccggaca
      721 tgaccgccgt ctacgatccc gccttccggg cccacctcac cgcctgcgca gcggggctgg
      781 gccagaccct ccgccagggg gtctacctgg gcctgacggg cccgagctac gaaacccccg
      841 ccgagatccg cgccttccgg gtcatgggag ccgacgccgt gggcatgagc accgtgcccg
      901 aggccatcgt ggcccgccac gagggcatgc gggtggcggg gatctcgtgc ctctgcaaca
      961 tggccgccgg catcctgccc caggccctca cccaccagga agtcctggaa gccggggccg
     1021 ccgccgcagg gcgcttcgag gccctggtac gggcgttcgt gagggatctg ccgttgtagc
     1081 ggcctgaaca cccagcccac ggttacggaa aagaagaagc ccggctttgc cgggcttctt
     1141 cgcgggggcc tgggggtgtg cgcgcagcga agcggagcgc ggaacccccg gactaatgtg
     1201 ggttcttctg gtgctcctcg atgaggcggg agaccacatc gggctcggcc agggtggaga
     1261 tgtcccccat gccgtcgtac tccgtggagg cgatcttccg gaggatgcgc cgcatgatct
     1321 tgccgctgcg ggtcttgggc aggcccgagg cgatgtggat gacgtccggc gccgcgaagg
     1381 cgccgatgac ctgccgcacc tgctccttga gggcgccgat gagctgctgg ttcccgttct
     1441 ccgcgtagcc gtggttgagc agcacgtagc agtagatgcc ctggcccttg atgggatggg
     1501 ggtagcccac caccgcggcc tcggccacgg cttcgtgggc cacgagggcg ctttccacct
     1561 cggcggtgcc cagacgatgg ccggagacgt tgatgacatc gtcgatgcgg cccgtgatcc
     1621 agtagtagcc atcctcgtcc cggcgggcgc cgtctcccgt gaagtagtac cccgggtact
     1681 gggtgaagta ggtctcccgg aaccgcttgt ggtcgccatg caccgtgcgg gcctggcccg
     1741 gccagggggc ccccaggcag agggctccgg acacgtcgtt gccctccagg ggcaccccgg
     1801 tggccggatc cacgatgacg ggcttcaccc cgaagaaggg cagcgtggcc gaccccggct
     1861 tcgtgggcgt cacgcccggc aggggcgtga tgaggatgcc gcctgtttcc gtctgccacc
     1921 aggtgtccac caccgtgcag cggccttcgc ccaccacgtc gtggtaccag cgccagactt
     1981 cgggattgat gggttcgccc acggtgccga gcacccgcag ggacttgcgg ctggatttct
     2041 tcacccattc atcgcccgcc tgggcgaggg cacgcagggc ggtgggcgcg gtgtagaaga
     2101 tcgtcacgcc cagatcgtcg atgatctgcc agtagcgggt ggcatccgga tagagcggtg
     2161 tggactcgaa gatcaccgag gtcgcgccgt tggccagggg gccgtagacg atgtagctgt
     2221 gccccgtgac ccagccgatg tccgcggcgc agaagtagat gtcctcgggg tggtagtcga
     2281 agaccagctt gtgggtgaag gcggcgtagg tgagatagcc gcccgtggtg tgcagcagcc
     2341 ccttgggctt tcccgtgctg ccggaggtgt agaggatgaa gagcggatcc tccgcgccca
     2401 tccactcgtt ggtgcaggtg gaacgctgct tggccgtttc ctcgtccagc cagaggtccc
     2461 ggcccggctg catgggcaca tcgccgtccg tgcggcgcgc cacgaggacg cactccacca
     2521 gggacatgcc ctcgatggcc cggtccaccg tgcgcttgag gggcacccgc ttgccgccgc
     2581 gcaggccttc gttggccgtg accaccacct tgcagcgggc gtccacgatg cggtcccgca
     2641 gggactccgc cgagaacccg ccgaagacca cggaatgcac ggcgccgatg cgggcgcagg
     2701 ccagcatggt gtagaccagc tcggggatca tcgtcaggta gatgcagacc cggtcgccct
     2761 tctgcacgcc gttgtgcagc aggacgttgg ccacccgggc cacgttgtgc ttgaggtcgc
     2821 ggtaggtgat gtgggtgtag acgccgggct catcctgggc ccagatgagg gcggtcttgt
     2881 cgcccaggtg cggcagatga cggtccacgc agttgaagca ggcattcagc cgcccccccg
     2941 agaaccacga gaagtccacc tccttgtagt ccgcatcgaa gaccgactgc cagggatgga
     3001 accaggtgag cgtcttggcc tgctcgcccc agaaccattc gggattgtcc agagacaggc
     3061 ggtacaaccg ctggtactcc tccatggtct tgatgtgggc ccgctcccgg atgtggggct
     3121 tcacggggaa gaggtcttcg gacatgggtc ggctccgtgc caggaaggtg gtggagatgt
     3181 tggaacgggg agggtggggc tggagaagcc gggcgatgga tgtctccgct cgcccggctc
     3241 cccgtcaagt ccccggcggc cgcagggccg ccggaggttc aggtcagtgc tggtaggtgc
     3301 tgatgtcccg gtccttggtt tcctttagga acagggcgcc gatgaccacc gtgaccaggg
     3361 ccacgatgat gggataccag agtccgtagt agatgttgcc cttcagggcc acgatggccg
     3421 tggcgatgag gggcagcatg ccgccgaacc agccgttgcc gatgtggtag ggcagggaca
     3481 tggaggtgta gcggatgttg gtggggaaca gctccaccag gaaggcggcg atgggcccgt
     3541 agaccatggt cacgtagatg agcatgatga acaggatcag cagggtcatg gggtagttga
     3601 ccttcgactt gtcggcctcc ttgggatagc cgaggctgtc cagggcctgc ttgagggcgg
     3661 cttccgaggc cgcattccag ccctccacgc gggtggtggt gaactgcccc gtgacgggat
     3721 tcttgccttc gatggtggcg accaccatct tgccggcctc aggccccacc ttgttgaagt
     3781 tcagaccctg cttgccgaag aaatcgttca cgcggtccag ttccgtgaac ttgctccagg
     3841 ggcccacgaa gaggttgaac gtctcgtcct tggggttgcc ggcgactgtg atcacggtgg
     3901 tgttctggaa ggtctccagg gccggattca catagtgcgt cagggccttg aacaggggga
     3961 agaaggtgag ggcggcgatg aggcagccgg ccaggatgat cttcaggcgg ccgatcttgt
     4021 ccgacagcca gccgaagaag atgaagaagg gcgtgccgag cagcagcgac gcgccgatga
     4081 gcatgtaggt ggtctggtag tccagcttca gcgtgatctg catgaagaag agggcgtaga
     4141 actggcctgt gtaccacacc acgccctggc ccgcggtggc gccgagcagc gccaacaggg
     4201 cgtacttgtt gttggggtac ttcaggaagc tgtcgctgag gggggccttg gaggtcttgc
     4261 cttccgactt catcttcgtg aacacggggg attcgtgcag cttcaggcgg atccagacgg
     4321 acacgcccag caggaagatg gacatccaga aggggatgcg ccagccccag gaggagaagg
     4381 cttccttggt catggcggac cggcagccga ggatgatccc gaggcacagg aagaagccca
     4441 cggtggccgt ggtctggatc cagctggtgt tgtagcctcg gcggtcatgg gcggagtgtt
     4501 ccgccacata ggtggccgcg ccgccgtact cgccgcccag ggccaggccc tggagcaggc
     4561 gcagggtgac catgatgatg ggggcccacc agccgatggt ggcgaaggtc ggcaggaggc
     4621 cgacgccgaa ggtggagagg cccatgacga cgatcgtcac caggaaggtg tacttccggc
     4681 cgatcaggtc gccgatgcgc ccgaagacca gggcgccgaa ggggcggacc aggaagccgg
     4741 cggcgtaggc cgcgaaagcg gagagcagcg cggccgtctc gttccccttg gggaagaaga
     4801 gggtcgcgaa gaagggcgcc agcgtggcgt acaggtagaa gtcgtaccac tcgaacaccg
     4861 tccccacgga cgatgccacg atcaccatgc gttcttcctt ggtgaggggg gtcttggtcg
     4921 cgacttgttc ggttgcaatg gccatatcgt gttgcctcct agagcgttcc tttggatggg
     4981 gcctggatgt tcggtgattc ggctgcggtc gggccggacg acgcttcaaa ctgcggaacc
     5041 tggggtttcc cctttctgga tgccgg
//
LOCUS       DASUDT010000202         2573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1445664, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000202 DASUDT010000000
VERSION     DASUDT010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445664"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..619
                     /locus_tag="VFV26_04235"
     CDS             284..619
                     /locus_tag="VFV26_04235"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX4845403.1"
                     /translation="MIMNTRKHNDVLILYPEGKITLGDGDQELGEAVRTSLAEGARKI
                     VINFSKVSYLDSSGVGELVGCFTSIKGKGGELRICGMSSKIFSLIKMTSLHSVFEVKD
                     TEDEALAGF"
     gene            690..>2573
                     /locus_tag="VFV26_04240"
     CDS             690..>2573
                     /locus_tag="VFV26_04240"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX4845404.1"
                     /translation="MASRPITALRIEGGNIDDRRFAEAALGLRVGQVVDPAAFQQALA
                     AVRLVDRYRMVEGSLGADGAILLRLEPLAPVDSWSWEGDPLPGDLRKILLADLRKGQR
                     LGPQRLASLERSAEQRLREAGYRKADVKARVEAGGRQLRLVLSLGPPRLIQEVRIEGD
                     PAPYTREALLKIAGIAPGRTHWTPVVQREAQRRLRQRLVKDRRLEGFVRLTPAEGEGA
                     GLILDIRPGPKVTLKAKGMNLLGPLWGRPRLSEFVPLARAERYSPSLLDEGDGRITAY
                     FRDQGYPEAKVTHVRTVTAGSPERPQAVTIAFTVDRGPRRVLGSVRFEGNRELADDDL
                     RQAVSLPKRFFLLAPHAKAEAMRAMEDRLTAHYLQRGFHDVRVRRRVEGGKDGAVDVR
                     FTIREGQQRFLDALVLELAADSALPRERLVQSLLLALADRPVPIPGTSRYRSDRRYLQ
                     GYEGTLEATGEGARLSFKPSLPLVRNDLALVVSDLRQRLSSAGAANPQVKLAFEDETQ
                     PVVRIQVPPQPFDQARRLVVQGSDRTRAEAVLRETALAPGLPLDPAKLDEGQVHLGGL
                     GAFQRVDLLTLKDIPGQETEPWQRGDLALRLQERSPWVFTEGFGYDRTQGYHFGLNAQ
                     RLNV"
BASE COUNT          397 a          850 c          913 g          413 t
ORIGIN      
        1 agtcccgggt ccggtatccg ggcgtatcca ggttcgccag gttggaggcg atgagcatct
       61 ggcgcctgga ggccagcgtc aggcttcgat ccatggtctg gatcatgccg ttgccactgg
      121 tcaggtcgaa catggggcac cctgcagaat gggccgggcg gatccggctt ccgctaggag
      181 catgcagtcc ccatgccgga tttctcggcc gcccatgggc gccgccgggc ttgcgccgcg
      241 ccgtggcacc cttgctacac ttagcgctca cctcgaggcc cccatgatca tgaacacacg
      301 caagcacaac gatgtgctga tcctctaccc cgaagggaag atcaccctgg gggatggcga
      361 ccaggagttg ggtgaggcgg tccgcacctc gcttgccgaa ggcgcccgca agatcgtgat
      421 caacttcagc aaggtgagct acctggattc gtcaggtgtg ggcgagctgg tgggctgctt
      481 cacctccatc aagggcaagg gcggggagct gcgcatctgc ggcatgagct ccaagatctt
      541 cagcctcatc aagatgacca gcctgcattc ggttttcgaa gtgaaggaca ccgaggacga
      601 agccctggcc ggcttctagc gcggtgcgct tccgcgcggc ccttggatac agcctcctgg
      661 ccctggtttc cgccacgggc caggaggctt tggcgtctcg ccccatcacc gctctccgga
      721 tcgagggcgg caacatcgat gatcgacgct tcgcggaggc ggcgctgggc ctcagggtgg
      781 gccaggtggt ggacccggcg gccttccagc aggccctcgc cgcggtgcgg ctggtggacc
      841 gctaccgcat ggtggaaggc agcctcggcg ctgatggcgc gattctcctg cggctggagc
      901 ccctggcgcc ggtggacagc tggagctggg agggggatcc ccttcccggc gacctgagga
      961 agatcctgct ggcggatctg aggaaggggc aacgcctggg gccccagcgt ctggcatcgc
     1021 tggagcgcag cgcagaacag cggttgcggg aggccgggta ccgcaaggcc gacgtgaagg
     1081 ccagggtcga ggcggggggc cggcagctcc ggctggtgct cagcctcggg ccgccccggc
     1141 tcatccagga ggtccgcatc gaaggggacc cggcgccgta cacgcgggag gcgctgctga
     1201 aaatcgcggg catcgcgccg gggcgtaccc actggacgcc ggtggtccag cgcgaagccc
     1261 agcgccgcct gcgccagcgg ctggtgaagg accggcgcct ggagggcttc gtccgcctga
     1321 ctcccgctga aggtgagggc gccggattga tcctggatat ccgtcccggg ccgaaggtca
     1381 cgctgaaggc gaagggcatg aatctgctcg ggcccttgtg gggccggccc cggttgtcgg
     1441 aattcgtgcc cctggcccgg gccgaacggt actcgcccag cctgctggat gaaggggatg
     1501 ggcggatcac agcctatttc cgcgaccagg gctatcccga ggcgaaggtc acccatgtcc
     1561 gaaccgtcac ggcaggatct ccggagcggc cccaggctgt gaccatcgcc ttcacggtgg
     1621 atcgcggccc ccgccgggtt ctggggagcg tgcgtttcga ggggaaccgg gaactggccg
     1681 atgatgacct gcggcaggcc gtgagccttc ccaagcggtt cttcctgctg gcgccccatg
     1741 ccaaggctga agccatgagg gccatggagg accggctcac cgcccactac ctccagaggg
     1801 gatttcacga tgtgcgggtg cgccgccggg tggaaggcgg aaaggatggc gcggtggatg
     1861 tgcgcttcac catccgggaa ggacagcagc gcttcctgga tgccctggtg ctggaactcg
     1921 cggcagactc cgccctgccc cgggaacgcc tggtccagag tctgctgctg gccctcgccg
     1981 accggcctgt gccgattcct ggcacctccc gctaccgctc ggaccgccgg tacctccagg
     2041 gctacgaggg cacgctggag gccacgggcg agggggcccg gttgtccttc aagccctcgc
     2101 tgcccctggt ccgcaacgac ctggccctgg tggtctccga cctccgccag cggctctcct
     2161 ccgcaggcgc agccaatccc caggtgaagc tggccttcga ggatgaaact cagcccgtgg
     2221 tgcgcatcca ggtgcccccc cagcccttcg atcaggcgcg gcgtctggtg gtgcagggca
     2281 gcgaccgtac ccgcgccgag gctgtgctgc gggaaacggc gctggccccc ggcctgccgc
     2341 tggatcccgc caagctggac gagggacagg tccacctggg ggggctcggc gccttccagc
     2401 gtgtggacct gctgaccctg aaggacattc ccggccagga gaccgagcct tggcagcggg
     2461 gggacctcgc cctgcgtctg caggagcgca gcccctgggt gttcacagag ggcttcggct
     2521 acgacaggac ccagggctac cactttggct tgaatgccca gcggctgaac gtg
//
LOCUS       DASUDT010000203         3712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1666858, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000203 DASUDT010000000
VERSION     DASUDT010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1666858"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VFV26_04245"
     CDS             <1..278
                     /locus_tag="VFV26_04245"
                     /inference="COORDINATES: protein motif:HMM:NF037012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845405.1"
                     /translation="NRLRLIASPEGREGSVKLFQDVTVSVVRLDAGREVTAPIRPGRA
                     GFLQVAAGSISLNGLAMHAGDGARIEGERAIAVAASSPSEILFFDLA"
     gene            286..1152
                     /locus_tag="VFV26_04250"
     CDS             286..1152
                     /locus_tag="VFV26_04250"
                     /inference="COORDINATES: protein motif:HMM:NF017536.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX4845406.1"
                     /translation="MSIKPVLTLVPGLPTEDGNRVPLTRLVPGQGQRGAEAFCAMDPF
                     LLMDHFGPMTLPPGTDAGFPPHPHKGFQTLTYLIQGAFRHRDSTGGAGLLQPGGAQLM
                     NAGSGIVHEEMPVPEHLETGGPIEGVQLWINLPKADKGSAPGYTDLQPESMPWQALPG
                     GRIRVLAGTWAGVTGPARTPARIAYAHLELEAGARFQQTIPEGWTAAVVPLHGTVRIE
                     GTEVSADTVALLGAGEALALEAASAVSLMLLAGEPLREPIAHYGPFVMNTPQEIEQAV
                     LDYQQGRMGHLE"
     gene            1210..2778
                     /locus_tag="VFV26_04255"
     CDS             1210..2778
                     /locus_tag="VFV26_04255"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4845407.1"
                     /translation="MSDAIDRPTPDGSTDRDRLAQDLAGLEGVINRSAAGAARTSVRV
                     QTLAREIDQILDSTRSIQTTLEGLGSSISQGASGAEESAEATRHMADLTRHGLQESGQ
                     AVATVRQLQQQTNLTAERLESLMGHILQVNEVSQVIGEIADRTGLLSLNAAIEAAHAG
                     AFGRGFAVVAEEVRKLADRTSRQTQEIGALLEAIRRDLDPAREAMDRSLALASETRTQ
                     VESVEQRFAGIADLADTAAGHVTNIAQSASEEHAAARTLVEASGRLLDSTGTLKSEAE
                     AVAQDAFRLSSLTEVGHRHLAAYDTGSLFHRALDLGRALSRTASELLEAPVQAGQLRA
                     EELLALDYTEIRGPGIQSLSRFFGVLHVPPAGFTPPKYRTAYDALVERPLQEAFDRVL
                     DQEPRLTFALILDLNSYAPSHNRRYVQDWTGQPDKDLAGNRAKRFFTDNRVLVRGARH
                     GLGEAAEGLPDQASREAFRRVADLSEGASGPGDFLVQTYARDTGAIITVLTVPLHVCG
                     QRYGVSLLGWSSDS"
     gene            complement(2929..>3712)
                     /locus_tag="VFV26_04260"
     CDS             complement(2929..>3712)
                     /locus_tag="VFV26_04260"
                     /inference="COORDINATES: protein motif:HMM:NF023428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845408.1"
                     /translation="TWMEMPDPDLESLQGALGGRMMFDRADGHYDLASAFQKSLRGSD
                     ADAALYYLSRMIRGGEDPRFIARRLMVCAAEDVGNADPQAFLLCEAASRAVEQIGWPE
                     ARIPLAQAVIYTANAPKSNATVLAVDAALAADDAPIPEAIRDAHTSTARKAGRGAGYH
                     YSHDDYDREQAFLPDKLRGQSFYEPKRPQERSWRDRQEPDAAPLAALWEAWVDAHPEG
                     GELPLEAWSAELACSREALARAIGKLAQGTFTLGRKLEARPV"
BASE COUNT          522 a         1323 c         1318 g          549 t
ORIGIN      
        1 ggaaccgcct gcgcctcatc gccagcccgg agggccggga gggctcggtg aagctgttcc
       61 aggacgtgac cgtgtccgtg gtgcggctgg acgcgggccg cgaggtcacg gcgccgatcc
      121 ggccggggcg ggcgggcttc ctccaggtgg cagcggggtc catctcgctc aacggcctgg
      181 ccatgcacgc cggggacggt gcgcgcatcg aaggggagcg ggccatcgcc gtggcggcct
      241 cctcgccctc tgaaatcctg ttcttcgatc tcgcctgagg tgcccatgtc catcaagcct
      301 gttctgacgc tcgtgccagg cctccccacg gaggatggca accgcgtgcc cctcacgcgc
      361 ctggtgcccg gccagggcca gcggggcgcc gaggcctttt gcgccatgga tcccttcctg
      421 ctcatggacc acttcggccc catgacgctg cctccgggca cggacgctgg cttcccgccc
      481 catccccaca agggcttcca gaccctcacc tacctgatcc agggggcctt ccgccaccgg
      541 gacagcacgg ggggagccgg tctgctgcaa ccgggcggcg cccagctgat gaacgccggg
      601 tcgggcattg tccacgagga gatgccggtg ccggagcatc tcgagaccgg cggacccatc
      661 gagggcgtgc agctctggat caacctgccg aaggccgaca agggctcggc gccgggctac
      721 acggatctgc agccggaatc catgccctgg caggccctgc cgggcggccg catccgcgtg
      781 ctggcgggca cctgggctgg cgtgacggga ccggcgcgca cgccggcgcg catcgcctac
      841 gcccacctgg agctggaggc cggggcccgc ttccagcaga cgattccgga gggctggacc
      901 gccgccgtgg tgcccctgca cgggacggtt cgcatcgaag gcaccgaggt ttccgccgac
      961 accgtggccc tgctgggcgc tggcgaggca ctggccctgg aggccgcctc ggccgtgagc
     1021 ctcatgctgc tggccggcga gcccctccgg gagcccatcg cccactacgg gcccttcgtc
     1081 atgaacaccc cgcaggagat cgagcaggca gtcctggact accagcaggg gcgcatgggc
     1141 catctggagt gagggtttaa gtctggctgc aggacgtcga tgggaggacc atcccccccg
     1201 gaaggtccga tgtccgacgc cattgatcga cccacccccg atggttccac tgaccgtgac
     1261 cggctcgccc aggatctcgc gggcctggag ggcgtcatca accgctccgc cgccggggct
     1321 gcccgcacct cggtgcgggt tcaaaccctg gcccgggaga tcgaccagat cctggacagc
     1381 acccggtcca tccagaccac cctcgagggt ctgggcagca gcatttccca gggggcctcg
     1441 ggcgcggagg aaagcgccga ggccacccgt cacatggccg acctcacccg ccatggcctc
     1501 caggagagcg gccaggcggt ggcgacggtg cggcagctcc agcagcagac caacctgacg
     1561 gcggagcggc tggagtccct gatgggccac atcctccagg tcaacgaggt ctcgcaggtc
     1621 atcggggaga tcgccgaccg cacagggctg ctcagcctca atgccgccat cgaggccgcc
     1681 cacgccggag ccttcggccg gggcttcgcc gtggtggccg aggaggtgcg gaagctggcg
     1741 gaccgcacgt cccggcagac ccaggagatc ggcgccctgc tggaagccat ccgcagggac
     1801 ctcgatcccg cccgggaggc catggaccgc agcctggccc tggcctcgga aacccgcacc
     1861 caggtcgaat ctgtggagca gcggttcgcg ggcatcgcgg acctggcgga cactgcggca
     1921 ggccatgtga ccaacatcgc ccagtcggcc tcagaggaac acgcggcggc ccggaccctg
     1981 gtggaggcct ccgggcgcct gctggactcc acgggaaccc tgaaatccga agcggaggcc
     2041 gtggcccagg atgccttccg cctgtcctcg ctcacggagg tgggccatcg ccacctggcg
     2101 gcctacgaca cgggctcgct gttccaccgg gccctggacc tgggccgggc cctctcccgg
     2161 acggcctcgg agctgctgga ggcgcccgtg caggcgggcc agctccgggc ggaggagctc
     2221 ctggccctcg attacaccga aatccggggg ccgggcatcc agagcctgtc gcggttcttc
     2281 ggcgtgctgc atgtgccccc ggccgggttc acgccgccca agtaccgcac ggcctacgac
     2341 gccctggtgg agcggcccct ccaggaagcc tttgatcgcg tcctggacca ggaaccccgc
     2401 ctcaccttcg ccctgatcct cgacctcaac agctacgccc cctcccacaa ccgccgctac
     2461 gtgcaggact ggacgggcca gccggacaag gatctggcgg gcaaccgcgc caagcgcttc
     2521 ttcacggaca accgggtgct ggtgcggggg gcccgccacg gcctgggcga ggccgcagag
     2581 ggcctgccgg accaggcctc ccgggaagcg ttccgccggg tggcggatct gtccgagggg
     2641 gcttcgggcc ccggcgattt cctggtgcag acctatgccc gggacaccgg ggccatcatc
     2701 acggtgctga ccgtgcccct ccacgtctgc ggccagcgct acggcgtgag cctgctgggc
     2761 tggtccagcg acagttaggc gctctcgtac cttttcgcgt tcgagcgtga tagatccacc
     2821 acggaggcac ggagtatagg caccggggag gagcacggag gcctccgtgt tctttccgtg
     2881 atctctgtga ctccgtggtg aagctctatc gttgatgggc cactggtctc agaccggcct
     2941 cgcttccagc ttccgcccca gggtgaacgt cccctgggcc agcttgccga tggcccgggc
     3001 cagggcttcc cggctgcagg ccagctcggc gctccaggct tccaggggca gctcgccgcc
     3061 ttccgggtgg gcgtcgaccc aggcttccca cagggctgcg aggggcgccg catccggctc
     3121 ctggcggtcc cgccagctgc gctcctgggg gcgcttcggc tcgtaaaacg attggccgcg
     3181 cagcttgtcg ggcaggaagg cctgctcccg gtcgtagtcg tcgtgggagt agtggtagcc
     3241 cgcgccccgc ccggccttgc gggcggtgct ggtgtgggcg tcgcggatgg cctcgggaat
     3301 gggcgcgtcg tccgccgcca gggccgcgtc cacggccagg accgtggcgt tgctcttggg
     3361 ggcgttggcc gtgtagatca cggcttgcgc gagggggatg cgggcctcgg gccagccgat
     3421 ctgctccacg gcgcggctgg cggcttcgca gaggaggaag gcctgggggt cggcgttgcc
     3481 cacgtcctcc gcggcgcaga ccatgaggcg gcgggcgatg aagcggggat cctcgccgcc
     3541 gcggatcatg cggctcaggt agtagagggc ggcgtcggca tccgatcccc gcaggctctt
     3601 ctggaaggcg ctggccaggt cgtagtggcc gtcggcgcgg tcgaacatca tgcggccgcc
     3661 cagggcgccc tggagggact ccaggtccgg gtccggcatc tccatccagg tc
//
LOCUS       DASUDT010000204         2087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1998074, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000204 DASUDT010000000
VERSION     DASUDT010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998074"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VFV26_04265"
     CDS             complement(<1..475)
                     /locus_tag="VFV26_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845409.1"
                     /translation="MNAAPSLLATIRATARGYAPRVLQGRGWVLAGLVMAPVGLSLLI
                     FTISRMQGLDANPAEALRIFHEGLVKMMLPIMALVAAPAGIREDLEQRTLPLMLARPA
                     PAWALPLGKGLPWFAWGAAWLILGTLGLQLIGGDPALLPGRMVALVGAWWGELALM"
     gene            complement(472..1392)
                     /locus_tag="VFV26_04270"
     CDS             complement(472..1392)
                     /locus_tag="VFV26_04270"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845410.1"
                     /translation="MISLDRASLRYGPILGLSPTTFELPDGGGITGLLGPNGAGKSSL
                     LQLLSGLLPPSGGDVKVFGEAPFRNPAVLARLGLVPEGDRLPTGLRADRWLRMMGELS
                     GLSGEGLKAAVARSLDIVGMGDRAHLTFARMSKGMRQRIRLAQALLHEPELLILDEPF
                     NGLDPEARLTLMALLRDLAARGVRILVSSHILGEIAQLTDRILLLFRGRLLAEGTVTE
                     IRQLLDRHPVELRLTGEAQVLARWAVEQPELAALRMEEDAVVLSVRSPRDILPRLQKA
                     AAEGGIPLRALDPLDLNLDAVFQYLTKDHA"
     gene            complement(1392..>2087)
                     /locus_tag="VFV26_04275"
     CDS             complement(1392..>2087)
                     /locus_tag="VFV26_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845411.1"
                     /translation="IYVDHLLQTNQSFKPMQDFAKTILTQGADFQADLLNPASYLLWF
                     LVALVGGGLVARDTLYRVRPLMYAHPVAPKDYLLAKLGFASALPFAILLPFALLPWLM
                     SLLLAGFHGPVWATAPLRLLPAMAISSALMGALAVGASSMAATPRAGIGWVLGLVLGT
                     AALASMLQGLTGVPAVQAINPVLLAETWPQLFVGVAHPLMGWGPAALGTAVHLALWTF
                     VAARRTLPSEAVI"
BASE COUNT          342 a          694 c          813 g          238 t
ORIGIN      
        1 tcatgagggc cagctcgccc caccaggccc ccaccagcgc caccatgcgg cccggcagca
       61 gggcgggatc gccgccgatc agctggaggc ccagggtgcc caggatgagc caggcggccc
      121 cccaggcgaa ccagggcagg cccttgccca gaggcagcgc ccacgcgggc gcgggacggg
      181 ccagcatcag gggcagcgtg cgctgctcca ggtcctcgcg gatgcccgcg ggagccgcca
      241 ccagggccat gatgggcagc atcatcttca ccaggccttc atggaagatg cggagcgcct
      301 cggcgggatt ggcatcgagg ccctgcatgc ggctgatggt gaagatgagg aggctgaggc
      361 ccaccggcgc catgaccagg ccggcaagca cccagccgcg gccctggagg acccgggggg
      421 cgtaaccccg cgccgtggcg cgaattgtcg ccagtaggga gggtgcagcg ttcatgcatg
      481 atccttggtg aggtattgga agaccgcatc caggttgaga tccaggggat cgagggcccg
      541 cagggggatg ccgccctccg ccgcggcctt ctgcaggcgg ggcaggatgt cccgggggga
      601 gcgcacggac agcaccacgg cgtcctcctc catgcgcagg gcggccagtt ccggctgctc
      661 cacggcccag cgggccagca cctgggcctc gcccgtgagg cgcagttcca ccgggtggcg
      721 gtccagcagc tggcggatct cggtgacggt gccctcggcc agcaggcgcc cccggaacag
      781 cagcaggatg cggtccgtga gctgggcgat ctcgcccagg atgtggctgg acaccaggat
      841 gcgcacgccc ctcgcggcca ggtcgcgcag cagggccatg agggtgaggc gggcctcggg
      901 atccaggccg ttgaagggct cgtcgaggat caggagttcc ggctcgtgca gcagggcctg
      961 ggccaggcgg atgcgctggc gcatgccctt ggacatgcgg gcgaaggtga ggtgggcgcg
     1021 atcacccatg cccacgatgt ccagggagcg ggccacggcg gccttcaggc cctcgccgga
     1081 caggcccgac agctcgccca tcatgcggag ccagcggtcc gcgcggaggc ccgtgggcag
     1141 gcggtcgccc tcgggcacca ggcccaggcg cgccagcacg gccggattgc ggaagggggc
     1201 ttcgccgaag accttcacat cgccgcccga ggggggcagc aggcccgaga gcagctgcag
     1261 cagcgaggac ttgccggcgc cgttgggacc cagcaggccc gtgatgccgc cgccgtccgg
     1321 cagctcgaag gtggtggggc tgaggcccag gatggggccg tagcggaggg aggcgcgatc
     1381 gagggaaatc atcagatcac cgcctccgag ggcagggtcc gcctggcggc cacgaaggtc
     1441 cacagggcca ggtggacggc tgtgccaagg gccgcgggcc cccagcccat caggggatgg
     1501 gccacgccca cgaagagctg gggccaggtc tccgccagga ggaccgggtt gatggcctgg
     1561 accgccggga ctcccgtgag cccctggagc atggaggcca gggcggcggt gcccagcacc
     1621 aggcccagca cccagccgat gccggcccgg ggcgtggccg ccatgctgga ggcgcccacg
     1681 gcgagggcgc ccatgagggc ggagctgatg gccatggccg gcagcaggcg caggggcgcc
     1741 gtggcccaga cggggccgtg gaagcccgcc agcagcagcg acatcagcca gggcagcagg
     1801 gcgaagggca gcaggatggc gaagggcagc gccgaggcga agcccagctt ggccagcagg
     1861 tagtccttcg gcgccacggg gtgggcgtac atcaggggcc gcacgcggta gagggtgtcc
     1921 cgcgccacca gaccaccgcc caccagcgcc accaggaacc agagcaggta gctggcgggg
     1981 ttcagcaggt ccgcctggaa gtccgcgccc tgggtgagga tggtcttcgc gaaatcctgc
     2041 atgggcttga agctctggtt ggtctgcagc aggtggtcca cgtagat
//
LOCUS       DASUDT010000205         3919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1843583, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000205 DASUDT010000000
VERSION     DASUDT010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3919
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843583"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VFV26_04280"
     CDS             complement(<1..312)
                     /locus_tag="VFV26_04280"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX4845412.1"
                     /translation="MDRPASSRFGGLDPLRGILALCVAVYHLSVWFALSESGSGLNIA
                     TARLGNYSVSAFFVLSGFLLFRTASWARVRKEGLGRFWLRRFLRLAPLFYLVCALNVV
                     FR"
     gene            complement(333..1670)
                     /gene="creD"
                     /locus_tag="VFV26_04285"
     CDS             complement(333..1670)
                     /gene="creD"
                     /locus_tag="VFV26_04285"
                     /inference="COORDINATES: protein motif:HMM:NF008712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HEX4845413.1"
                     /translation="MRNPLLMKTLTVAGLALLLLIPLAMVQGLVESRNARQIEAADDI
                     ARLNAGRQQLTGPLLLARYEEQVVTESKNKTTGETVSRVSWVSKQQVIVPKTLEISAQ
                     ARVDTRKRGLFKAQAYDLDAQTKGRFSIPRGLGLDPSRTIRPGRATLLLGLTDLRGLR
                     ERPVLHWAGRAMDWQPGGVEGILNAAVHVNLGSLAELEGKDWAFEMPLALRGSQAFSV
                     APVAEVTRVSLTSPWPSPSFQGRFSARHNLSPQGFTATWEVFHLARSLTKILDGKGDS
                     EECFGVAFLEPVNVYLQAERATKYGFLFVGLVFAAFFFVEVLRRMPIHPLQYLLVGLS
                     LAIFFLLLLSLSEHIPFGWAYLASSLASLGLLGIYLVHVLRSARQGLGFTGGLALIFA
                     LLYGLLLYEDSALLMGSAVLFLGLAAVMIGTRKVDWYALGQSGGSAAIPGGGK"
     gene            complement(1995..3416)
                     /gene="creC"
                     /locus_tag="VFV26_04290"
     CDS             complement(1995..3416)
                     /gene="creC"
                     /locus_tag="VFV26_04290"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HEX4845414.1"
                     /translation="MRLGVRVLLAFFLIVALAAYLLLNTFLQEVKPGVKQGMEVALVD
                     TANLLAELAAEDLHRGTLAEGRFVRALAAYRERNPHARIFGVEKRRSEFRVYVTDEGG
                     RLVFDSDGTSAGTDYSRWNNVQRTLQGAYGARTTRTDPADETTSTMHVAAPVLWEGRL
                     IGTLTVASPSASVIPYAQASRRKVLRAGLVLLGACLLVGVGISWSLTRAIGRLRIYAR
                     DVAEGRRATMPPVGGGELADLGAALETMRSKLEDRAYVERYLATLTHEMKSPLAAIRG
                     AAELLDEEMPEADRRRFAAHIREQEARLRQLLDRMLDQAAIEQRQTLQDPQLLDLGAL
                     ARRVAESKAVGLARRGLDLRMDLPEVRLRGEAFLLEQALSNLLDNAMAFAPEGGAVRL
                     EGRLGEGRLRLSVLDDGPGVPAFALPRAFEPFYSVAPPAGRKGTGLGLSFVKEVATLH
                     GGVAGLENRPGGGAEAWMVLPLA"
     gene            complement(3407..>3919)
                     /gene="creB"
                     /locus_tag="VFV26_04295"
     CDS             complement(3407..>3919)
                     /gene="creB"
                     /locus_tag="VFV26_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HEX4845415.1"
                     /translation="LSGFEVCRRLRAFSDVPVIFLTARSDEVDRVLGLEIGGDDYVAK
                     PFSPRELVARVRVILRRLSPRPADPPAAAFEQDAPARRIRFRGQALDLTRYEYLLLAT
                     LLSQPERIFTRSQLMEEVWSGAEESADRTVDTHVKTLRAKLRAIDPEADPIQTHRGVG
                     YSLSTRIPCA"
BASE COUNT          644 a         1387 c         1361 g          527 t
ORIGIN      
        1 ccggaagacc acgttcaggg cgcagaccag gtagaacagg ggggccagcc gcaggaagcg
       61 ccgcagccag aagcggccca ggccctcctt ccggacccgc gcccaggagg cggtccggaa
      121 gaggaggaac ccgctcagca cgaagaaggc cgacacgctg tagttgccca gccgggcggt
      181 ggcgatgttc agccccgacc ccgattccga cagggcgaac cacacgctga ggtggtagac
      241 cgccacacac agggccagga tcccgcggag gggatccagg ccaccaaaac gtgaagatgc
      301 ggggcggtcc atggaggagg atacccccct ccctacttcc cgcccccggg tatcgcggcg
      361 gaaccaccgg actggcccag tgcataccaa tccaccttgc gggtgccgat catgaccgcc
      421 gccagcccca ggaacagcac ggccgaaccc atcagcaggg cgctgtcctc atagagcagc
      481 aggccgtaga ggagggcgaa gatgagggcc aggcccccgg tgaagcccag gccctgccgt
      541 gcgctgcgca gcacgtgcac caggtagatc cccagcaggc ccaggctggc caggctcgac
      601 gccaggtagg cccagccgaa ggggatgtgt tccgaaaggc tcagcagcag gaggaagaag
      661 atcgccaggg acaggcccac cagcaggtac tgcagggggt ggatgggcat ccggcggagc
      721 acttccacga agaagaaggc cgcgaacacc aggcccacga agaggaaccc gtacttggtg
      781 gcccgctcgg cctggaggta gacgttcacg ggctccagga aggccacccc gaagcactcc
      841 tccgagtccc ccttgccatc gaggatcttg gtcaggctcc gggccaggtg gaacacctcc
      901 caggtggccg tgaacccctg gggcgacagg ttgtgccgcg ccgagaagcg gccctggaag
      961 ctgggcgagg gccaggggga ggtcagcgac acccgcgtga cctccgccac gggggccacg
     1021 gaaaaggcct gggagccccg cagcgccagg ggcatctcga aggcccagtc cttcccctcc
     1081 agctccgcca gggatcccag gttcacgtgg accgccgcgt tcaggatccc ctccacgccc
     1141 ccgggctgcc agtccatggc ccggccggcc caatggagca cggggcgctc ccgcagcccg
     1201 cgcaggtccg tcaagcccag caggagggtg gcgcgcccgg gacggatggt ccgcgagggg
     1261 tccagaccca ggccccgggg gatggagaac cggcccttgg tctgggcatc gagatcgtag
     1321 gcctgggcct tgaacaggcc ccgcttccgg gtgtccacac gggcctgggc ggagatctcc
     1381 agcgtcttgg ggacgatcac ctgctgcttg ctgacccagc tgacccggga cacggtttcg
     1441 cccgtggtct tgttcttcga ttcggtgacc acctgctcct cgtaccgggc caggagcagg
     1501 ggccccgtga gctgctggcg cccggcgttg agccgcgcga tgtcatctgc cgcctcgatc
     1561 tgccgggcat tccggctttc caccagcccc tgcaccatgg ccagggggat gagcagcagc
     1621 agggccagcc ctgccacggt gagggtcttc atcaacagcg ggttccgcat gggtcactcc
     1681 tgacgtgtcc caggagcatc cggggcttcc gtgaacggaa gatgaggttc tgtgaagccg
     1741 gtgtgaagcc actcaggcca tcttgcgatc aaagacttag aaaatcacca cggagatacg
     1801 gagaccacgg aggtggcact gaggcccccg tgtccctccg tcatgggcag gccgaaggcc
     1861 gcttccggca aggccgaaag ccacaggagg cgccagaccc ggatcctttt aggggcatcc
     1921 gagcctggcg cctcctgtgt gcccatgctc tgtgtctccg tggtggatct ttcacgattg
     1981 aatgcaaatc gatatcaggc cagaggcagc accatccagg cctcggcgcc gccgccgggg
     2041 cggttctcca ggcccgcgac gccaccatgc agggtggcca cctccttcac gaagctgagg
     2101 cccaggcccg tgcccttccg gcccgcaggc ggggccacgg aatagaaggg ctcgaaggct
     2161 cgcggcaggg cgaaggccgg cacccccggt ccgtcgtcga gcacggacag gcgcaggcga
     2221 ccctcgccca ggcggccttc cagccggacg gccccgcctt cgggcgcgaa ggccatggcg
     2281 ttgtccagca ggttcgatag ggcctgctcc agcaggaagg cttcgccccg caggcggacc
     2341 tcgggcaggt ccatccgcag gtcgaggccc cgccgcgcca ggcccacggc cttcgattcg
     2401 gccacccgcc gcgccagggc ccccaggtcc agcagctgcg ggtcctggag ggtctgccgc
     2461 tgctcgatgg cggcctggtc cagcatgcgg tccagcagct gccgcagccg cgcctcctgt
     2521 tcccggatgt gggctgcgaa gcgccgccgg tccgcctccg gcatctcctc gtccagcagc
     2581 tcggcggcgc cccggatggc ggcgaggggg ctcttcatct cgtgcgtcag cgtggcgagg
     2641 tagcgctcca cataggcccg gtcctccagc ttcgagcgca tggtctccag ggccgcgccc
     2701 aggtccgcca gctcgccgcc gcccaccggc ggcatggtgg cccgccgtcc ttcggccacg
     2761 tcccgggcat agatccgcag gcgtccgatg gcccgggtga ggctccagga gatgcccact
     2821 cccaccagga ggcaggcgcc caggaggacg agccccgccc gcagcacctt gcggcggctg
     2881 gcctgggcgt aggggatcac gctggcgctg ggggaggcca ccgtgagcgt gccgatgagc
     2941 cggccctccc acagcaccgg cgccgccacg tgcatggtgg aggtggtctc gtccgcggga
     3001 tccgtccggg tggtgcgggc cccgtaggcg ccctgcaggg tgcgctgcac gttgttccag
     3061 cgcgagtagt ccgtgcccgc ggacgtcccg tcggaatcga agaccagccg gcctccctcg
     3121 tccgtgacgt agacgcggaa ttcggagcgg cgcttctcca cgccgaagat ccgcgcgtgg
     3181 ggattccgct cccggtaggc cgccagggcc ctcacgaacc ggccctccgc cagcgtcccc
     3241 cggtggagat cctccgccgc cagctccgcc aggaggttcg ccgtgtccac cagcgccacc
     3301 tccatgccct gcttcacgcc gggcttcacc tcctggagga aggtgttcag cagcaggtag
     3361 gccgccaggg ccacaatgag gaagaaggcc agcaggaccc ggacccctag gcgcatggga
     3421 tccgcgtgga caggctgtag cccacgcccc ggtgggtctg gatggggtcg gcctcgggat
     3481 cgatggcccg gagcttggcg cgaagggtct tcacgtgggt gtccacggtg cggtccgcgc
     3541 tttcctcggc gccgctccag acctcctcca tgagctggga gcgggtgaag atgcgctcgg
     3601 gctgggacag cagcgtggcc agcagcaggt actcgtaccg cgtgagatcc agcgcctggc
     3661 cccggaagcg gatgcgccgc gccggggcgt cctgctcgaa ggccgcggcg ggcggatcgg
     3721 ccggacgggg tgacagccgc cgcaggatca cccgcacccg ggccaccagc tcccgggggc
     3781 tgaagggctt ggccacgtag tcgtccccgc cgatctccag ccccagcacc cggtccactt
     3841 catcgctgcg ggccgtgagg aagatcacgg gcacgtccga gaaggcccgc aggcggcggc
     3901 agacttcgaa gcccgacag
//
LOCUS       DASUDT010000206         4801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2174964, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000206 DASUDT010000000
VERSION     DASUDT010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2174964"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VFV26_04300"
     CDS             <1..869
                     /locus_tag="VFV26_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845416.1"
                     /translation="TRDGHPCDQLYTMNADGSDQRRVSTGQGRVTCGWFLPGDGRVLY
                     ASTHGDGAGCPQAPPFTPGKYQWPVFQGYDLYIAAADGKDAKPFLASPGYDAEATVSP
                     DGRWVVFTSERGGDVDLWRADLDGKNLTRLTEGVGYDGGAVFSPDSKLIAWRTNYPKG
                     DAATAKYKDLLRQHLVEPMDMDIWVMNADGTGKRQVTKLPGAAFAPIFTPDGKGLVFA
                     TNHHDQEGKGRGFDLFRINLDGTGLERITWTGVFNSFPHFSPDGKKLLWVSGRNPRGS
                     RQFDVCVAEWIP"
     gene            866..1423
                     /locus_tag="VFV26_04305"
     CDS             866..1423
                     /locus_tag="VFV26_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX4845417.1"
                     /translation="MTRRPAVFLDRDGTLNEEVDYLSDPEQLALIPGAAAAVARLNAQ
                     GIPVVVVTNQSGIGRGKYGWQEFAAVMHRMGTLLALEHAHIDAVYASPHHERGQGEYA
                     VADHPDRKPNPGMLLRAAEEHGLHLPDSWMVGDKAIDLEAGRRAGCRVALVRTGYGTQ
                     VDGAAADLVAADLAEAVDRILAQWP"
     gene            1420..2160
                     /gene="sfsA"
                     /locus_tag="VFV26_04310"
     CDS             1420..2160
                     /gene="sfsA"
                     /locus_tag="VFV26_04310"
                     /inference="COORDINATES: protein motif:HMM:TIGR00230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HEX4845418.1"
                     /translation="MILVEKAGLVAGTLLQRYKRFLADVRLADGSVVTAHTTNTGSMK
                     TCWEPGDRVLLEPAANPARKLKFTWLAVERSGGWVGVETGMPNRVVAEAARRDALPGL
                     PGLHGVRTEVKYGAENSRIDVLALDGEGRQVFIEVKNTTLKDGPWALFPDAVTERGTK
                     HLRELQAMAREGHRAAIALFVHRTDVDRFDAARDIDPAYAAELDRAAQTGVLVLPLAV
                     RLITSEGPGGLWSLGWEVPGLLPWVPRR"
     gene            2187..3302
                     /gene="gcvT"
                     /locus_tag="VFV26_04315"
     CDS             2187..3302
                     /gene="gcvT"
                     /locus_tag="VFV26_04315"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: protein motif:HMM:NF001567.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEX4845419.1"
                     /translation="MSTSVSELMKTPLNAAHRALNAKMVDFGGWDMPVQYPAGILAEH
                     EAVRTRAGLFDVSHMGEIRVKGPGALALVEHLTPNAVSKLAVGQVHYTAFLYENGTFV
                     DDLLVYREGEQEFLLVVNAGNSDKDFAWVQKHAPAFDCTVVNESPATGQIALQGPLSL
                     DILQPLTKTPLEPIGYYFFTHGEVAGVKCLISRTGYTGEDGFELYCAAGDTEKLWNAV
                     MAAGTPKGLLPAGLGCRNTLRLECKMALYGHEIDDTIHALEAGLGWIVKLDKGDFMGR
                     EALLAAKAAPAPRKLVGFKTLEKRDIARDHMPVVQDGKQIGFVTSAAPSPTCGINLGL
                     AYVPTDLAKVGGRIQIEIRGRAVDADIIPTPFYKRAK"
     gene            3341..3724
                     /gene="gcvH"
                     /locus_tag="VFV26_04320"
     CDS             3341..3724
                     /gene="gcvH"
                     /locus_tag="VFV26_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX4845420.1"
                     /translation="MFPADLKYTKDHEWLKPAGDGTALVGITHYAQDALGDVVFVDLP
                     EAGEAFEAGEEFGTVESVKTVSELNMPVGGEVLEANAILADHPEAVNEDPYGKGWMVK
                     IKLAGDLAGLLDAKAYEALVGAESH"
     gene            3770..>4801
                     /locus_tag="VFV26_04325"
     CDS             3770..>4801
                     /locus_tag="VFV26_04325"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX4845421.1"
                     /translation="MPAQAPAPSPQTHLTAAPPARAVESDGARLGRLRALVEAAEKAL
                     EAEDEDAAEDRADEADVLTADWPAELLRNEEAQALLQRLKDVQDQLAAEAPADAEPGL
                     KAAEEVVSISGEELRIELEKVREAEKGATYDFPIDLNDKVLTWVSLFTTTKRGFMENA
                     LGRAATYMPMVRQVFAEEGVPQDLAYLAVIESGFRNEAKSRAKAVGMWQFIRSTGRIY
                     GLTANAWVEERRDPVKSTRAAARYLKRLYETSGDWYLAVSGYNAGPGTLERAYQNLGT
                     RNFWDMARSRWLRTETKNYVPELCAAILVGRNPERYGLRIVPLAPYTYETVSVPSMTS
                     LAVLARCAGT"
BASE COUNT          819 a         1667 c         1646 g          669 t
ORIGIN      
        1 gcacgcggga cgggcacccc tgcgatcagc tctacacgat gaacgcggat ggatcggacc
       61 agagacgggt gagcacgggg cagggccgcg tcacctgcgg ctggttcctg ccaggcgacg
      121 ggcgggtgct ctacgccagc acccacgggg atggcgccgg atgcccccag gcccccccct
      181 tcacgcccgg caagtaccag tggcccgtct tccagggcta tgacctctac atcgccgccg
      241 ccgacggcaa ggacgcgaaa cccttcctgg cctcgccggg ctacgacgcg gaggccaccg
      301 tgtctccgga cggccggtgg gtggtgttca ccagcgagcg gggcggggac gtggacctct
      361 ggcgggcgga tctggacggg aagaacctga ctcgcctgac ggagggcgtg ggctacgacg
      421 gcggggccgt gttcagcccc gactcgaagc tcatcgcctg gcgcacgaac tatcccaagg
      481 gcgatgccgc caccgcgaag tacaaggatc tcctccggca gcacctggtc gagcccatgg
      541 acatggacat ctgggtgatg aacgccgacg gcaccggcaa gcggcaggtg acgaagctgc
      601 cgggagcggc cttcgcgccc atcttcacac cggacggcaa ggggctcgtc ttcgccacca
      661 accaccacga ccaggagggg aagggccgcg gtttcgacct cttccgcatc aacctggacg
      721 ggacgggcct cgaacggatc acctggacgg gcgtgttcaa ctccttcccg cacttcagcc
      781 ccgatgggaa gaagctgctc tgggtgagcg gccggaaccc ccgcggatcc cgccagttcg
      841 atgtgtgcgt ggccgagtgg attccatgac gcggcggccc gccgtcttcc tggaccggga
      901 cggcaccctg aacgaggaag tggactacct cagtgatccg gaacagctgg cgctgatccc
      961 cggcgccgcg gccgcggtgg cgaggctgaa tgcccagggc attcccgtgg tggtggtcac
     1021 gaaccagagc ggcatcggcc ggggcaagta cggctggcag gagttcgccg ccgtcatgca
     1081 ccgcatgggc acgctgctgg ccctggaaca cgcccacatc gacgcggtct acgcctcgcc
     1141 ccaccatgag cgggggcagg gggagtatgc cgtggccgat cacccggacc gcaagcccaa
     1201 ccccggcatg ctgctccggg cggcggagga gcatgggctc cacctgccgg attcgtggat
     1261 ggtgggtgac aaggccatcg atctggaggc gggccgccgg gccgggtgcc gcgtggccct
     1321 ggtgcgcacg ggctatggca cccaggtgga tggggccgcc gccgacctgg tggccgcgga
     1381 cctggccgaa gcggtggacc gcatcctggc ccagtggcca tgatcctggt ggagaaggcc
     1441 ggcctggtgg cggggacgct gctccagcgc tacaagcggt tcctggcgga tgtgcgcctg
     1501 gcggatggtt ccgtcgtcac cgcccacacc accaacacgg gctccatgaa gacctgctgg
     1561 gagcccggcg accgggtgct gctggaaccc gccgccaatc cggcccgcaa gctgaagttc
     1621 acctggctgg cggtagagcg gtccggcggc tgggtgggcg tggagacggg catgcccaac
     1681 cgcgtggtgg cggaagcggc ccggcgggat gcgctgccgg gcctgccggg cctgcacggc
     1741 gtccgcaccg aggtgaaata cggcgccgag aacagccgca tcgacgtgct ggccctggat
     1801 ggggagggcc gccaggtgtt catcgaggtg aagaacacca ccctgaagga cgggccctgg
     1861 gccctgttcc cggacgcggt cacggagcgg ggcaccaagc acctgcgcga gctccaggcc
     1921 atggcgcgcg aggggcaccg ggcggccatc gcgctgttcg tccaccgcac cgacgtggac
     1981 cgcttcgacg cggcccggga catcgatccg gcctacgccg ccgaactgga tcgcgcggcc
     2041 cagaccgggg ttctcgtcct gcccctcgct gtgcgcctca tcacaagcga ggggccgggt
     2101 ggtctgtgga gcctgggctg ggaagttcca ggccttctgc cctgggttcc caggcgatag
     2161 actggggatt cccgctggag atccccatgt ccacttccgt gtccgaactc atgaagacgc
     2221 cgctgaacgc cgcccatcgg gccctgaacg ccaagatggt ggacttcggc gggtgggaca
     2281 tgcccgtgca gtaccccgcg ggcatcctcg cggagcatga ggccgtgcgg accagggccg
     2341 gcctcttcga cgtgagccac atgggcgaga tccgcgtgaa gggccccggc gccctggccc
     2401 tggtggagca cctgaccccc aatgccgtct ccaagctggc cgtcggccag gtccactaca
     2461 cggccttcct ctacgagaac ggcaccttcg tggacgacct gctggtgtac cgcgagggcg
     2521 agcaggagtt cctgctggtg gtgaacgcgg gcaactcgga caaggacttc gcctgggtgc
     2581 agaagcacgc ccccgccttc gactgcacgg tggtgaacga aagccccgcc accggccaga
     2641 tcgcgctcca gggccccctg tccctggaca tcctccagcc cctcacgaag actccgctgg
     2701 agcccatcgg ctactacttc ttcacccacg gcgaagtggc cggggtcaag tgcctcatca
     2761 gccgcacggg ctataccggc gaggacggct tcgagctcta ctgcgccgcc ggggacacgg
     2821 aaaagctctg gaacgccgtc atggccgccg gaaccccgaa gggactgctg cctgcgggcc
     2881 tgggctgccg caacaccttg cgcctggaat gcaagatggc cctctacggc cacgagatcg
     2941 acgacaccat ccacgccctg gaagccggcc tcggctggat cgtgaagctg gacaagggcg
     3001 atttcatggg ccgcgaggcc ctgctggccg ccaaggccgc ccccgcgccc cgcaagctgg
     3061 tgggcttcaa gaccctggaa aagcgcgaca tcgcccggga ccacatgccc gtggtgcagg
     3121 acggcaagca gatcggcttc gtcaccagcg ccgccccctc gcccacctgc ggcatcaacc
     3181 tcggcctggc ctacgtcccc accgacctgg ccaaggtggg cggccgcatc cagatcgaga
     3241 tccgcggccg ggccgtggac gccgacatca tccccacgcc gttctacaag cgggcgaagt
     3301 agcccccacc atccgtcaac aaagcccccc tggaggatcc atgttccctg ccgacctgaa
     3361 gtacaccaag gaccacgaat ggctgaagcc cgcgggcgac ggcaccgcgc tggtgggcat
     3421 cacccactac gcgcaggatg ccctgggcga cgtggtgttc gtggacctgc ccgaagcggg
     3481 cgaggccttc gaggccggcg aggaattcgg cacggtggaa tccgtgaaga ccgtttccga
     3541 gctgaacatg ccggtgggcg gtgaagtcct cgaagccaac gcgatcctgg ccgaccatcc
     3601 ggaagccgtg aacgaagatc cctacggcaa gggctggatg gtgaagatca agctggcggg
     3661 cgacctggcc ggcctcctgg acgccaaggc ctacgaggcc ctggtgggcg ccgaaagcca
     3721 ctaggccccc gtgccgcttc ccatcctggc cacgctcctc tgggggacga tgccggccca
     3781 agcgccggca ccgtcccccc agacgcatct gacggcagct ccccccgcac gggcggttga
     3841 atcggatggg gcccgcctgg gccggctgcg cgccctcgtg gaggccgccg agaaggctct
     3901 ggaggcggag gacgaggatg ccgccgaaga ccgcgcggac gaggcggatg tcctcaccgc
     3961 cgattggccg gcggaactgc tcaggaatga ggaagcccag gccctgctgc agcgcctgaa
     4021 ggatgtccag gaccagctgg cggccgaagc cccggcggat gcggagccgg gcctcaaggc
     4081 ggcagaggag gtcgtctcca tcagcggaga ggaactccgc atcgagctgg agaaggtccg
     4141 cgaagcggaa aagggcgcca cctacgattt ccccatcgac ctgaatgaca aggtgctcac
     4201 ctgggtgagc ctcttcacga ccaccaagcg cggcttcatg gagaacgccc tgggccgcgc
     4261 cgccacgtac atgcccatgg tgcgccaggt cttcgccgaa gagggcgtac cgcaggatct
     4321 ggcctacctg gcggtcatcg aatcgggctt ccgcaacgag gccaagagcc gggccaaggc
     4381 cgtcggcatg tggcagttca tccgctccac gggccgcatc tacggcctca cggccaacgc
     4441 ctgggtggag gagcgccggg atccggtgaa atccacccgc gccgccgccc gctatttgaa
     4501 gcggctctac gagacctcag gcgactggta tctggcggtt tccggctaca acgcgggccc
     4561 cggaacgctg gagcgggcct accagaacct cggcacccgg aatttctggg acatggcgcg
     4621 ctcccgctgg ctccgcaccg aaaccaagaa ctacgtgccc gagctttgcg cggccatcct
     4681 ggtgggccgc aatcccgagc gctacgggct gcgcatcgta cccctggcac cctacaccta
     4741 cgagaccgta tccgtgccca gcatgaccag cctcgcggtg ctggcccgct gcgccgggac
     4801 g
//
LOCUS       DASUDT010000207         2173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_252819, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000207 DASUDT010000000
VERSION     DASUDT010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252819"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..742)
                     /gene="modB"
                     /locus_tag="VFV26_04330"
     CDS             complement(68..742)
                     /gene="modB"
                     /locus_tag="VFV26_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEX4845422.1"
                     /translation="MDWQAIRLSLVLASLTTAALLVLGLPLAYWLAFSRRRWKFLVEA
                     VVAMPLVLPPTVLGFYLLMAMGPRSPLGHAWEGLFGRTLPFSFEGLLMASVLYSLPFM
                     IQPLAAAFASVDRGLIEASWCLGESRLRTFLRVIAPLSWAGILTGLVLSFAHTLGEFG
                     VVLMVGGNLPGRTRTVSIAIYDQVQAMDYAPAARTAALLLGVSFLVLAFTYALRRHQR
                     KPWTLI"
     gene            complement(742..1539)
                     /gene="modA"
                     /locus_tag="VFV26_04335"
     CDS             complement(742..1539)
                     /gene="modA"
                     /locus_tag="VFV26_04335"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4845423.1"
                     /translation="MPAAHVLRRCLRAALVAWAALGTGLAGWGAPPLAIAAAADLQFA
                     LPDLKAAFEKRHPGTSVTITYGSSGNFCTQLLNRAPFDLFLSADLAYPAKLVAAGAAE
                     GASVFRYGRGRLALWVPKDSPIPVEQLGMRALLHPAARRVAIANPRHAPYGRAAEAAL
                     AKAGLLEAVRPRLVFGENAGQAAQFVQTGAADIGLLALALAKAPALAASGRHWEVPQD
                     AHPPLEQAGVVLNHAGNRAAALAFRDLMRSPEGMEILRRHGFLVDAS"
     gene            1717..>2173
                     /locus_tag="VFV26_04340"
     CDS             1717..>2173
                     /locus_tag="VFV26_04340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tar ligand binding domain-containing protein"
                     /protein_id="HEX4845424.1"
                     /translation="MAPFLSRLRIAAKLWLGFSAVAGILAALALIQINFLHEEEHRVL
                     RIFENRMVPVRQLKTVSDAYGIHILFAARQVRGGTLEIPEGLKRIQGARREANRQWTA
                     FKAAARAHSDPEALARMDALMAYVDRDLDHLEQLLVEGHLASLGRFVDDD"
BASE COUNT          341 a          724 c          835 g          273 t
ORIGIN      
        1 gcctccacgg tggttccgcc cgggaaacgg cgttcggcgt ccgcctgcaa gtgggggccg
       61 ccggagatca gatgagcgtc cacggcttcc tctgatggcg ccgcagggcg taggtgaagg
      121 ccaggacgag gaaggacacg cccagcagca gggcggccgt gcgggcggcg ggggcgtagt
      181 ccatggcctg cacctggtcg tagatggcga tgctcacggt gcgggtgcgg cccggcagat
      241 tgccgcccac catgagcacc acgccgaact cgcccagggt gtgcgcgaag ctgagcacca
      301 ggcccgtgag gatgcccgcc caggagaggg gcgcgatcac ccggaggaag gtgcggagcc
      361 gcgattcgcc caggcaccag gaggcttcga tgaggccgcg gtccacggag gcgaaggccg
      421 ccgccagggg ctggatcatg aagggcaggc tgtagagcac cgaggccatg agcaggccct
      481 cgaaggagaa gggcagggtg cgcccgaaga ggccctccca ggcgtggccc agggggctgc
      541 gggggcccat ggccatcagg aggtagaagc ccagcaccgt gggcggcagc accaggggca
      601 tggccaccac cgcctccacc aggaacttcc agcgccgccg ggagaaggcc agccagtagg
      661 ccaggggcag gcccaggacc agcagcgccg ccgtggtgag cgaggcgagc acgaggctca
      721 ggcggatggc ctgccaatcc atcaggaggc gtccaccagg aagccgtggc ggcggaggat
      781 ctccatcccc tcgggggagc gcatgaggtc gcggaaggcc agggcggccg cccggttgcc
      841 ggcgtggttc aggacgacac cggcctgttc gaggggcggg tgggcgtcct ggggcacctc
      901 ccagtggcgg cccgacgcgg ccagcgcggg ggccttggcc agggcgaggg cgaggaggcc
      961 gatgtcggcg gcgccggtct gcacgaactg ggcggcctgg ccggcgttct ccccgaagac
     1021 caggcgcggc ctcacggctt ccagcagccc ggccttggcc agggcggctt cggcggcgcg
     1081 gccatagggc gcgtgccggg ggttggcgat ggccacccgg cgtgcggcgg ggtgcagcag
     1141 ggccctcatg cccagctgtt ccacggggat gggggaatcc ttcggcaccc acagcgccag
     1201 gcggccccgg ccgtagcgga agaccgaggc gccctccgcc gcgccggccg ccaccagctt
     1261 cgccggatag gccagatccg cggaaaggaa gaggtcgaag ggggccctgt tcagcagctg
     1321 ggtgcagaag ttcccggagg atccgtaggt gatggtgacg ctggttcccg gatggcgttt
     1381 ctcgaaggcc gccttcaggt cgggcagcgc gaactgcaga tcggcggcgg cggcgatggc
     1441 gaggggcggg gcgccccacc cggccaggcc ggtccccagg gccgcccagg ccaccagggc
     1501 ggcccgcaga cagcgtcgaa gaacatgggc ggcaggcatg gctggctccg ggcgtcaggg
     1561 cgcctgatcg attctatgcc gggaaggccc ggatcattgc cgccgtcggc gcggcccgtc
     1621 atgattcccc aggcaagctc ccctccatcg gccgcgcaga ccggctttcc atcctccggc
     1681 gcggctctgg tttccaggca ttccacggga tgtcgcatgg ccccgttcct cagccgcctc
     1741 cgcatcgccg ccaagctctg gctggggttc agcgccgtgg ccgggatcct ggcggctctg
     1801 gccctgatcc agatcaactt cctccacgag gaggagcacc gggtgctccg catcttcgag
     1861 aaccgcatgg ttccggtgcg gcagctgaag accgtatcgg acgcctacgg catccatatc
     1921 ctgttcgcgg cgcgccaggt ccggggcggc accctggaga ttcccgaggg actcaagcgg
     1981 atccaggggg ccaggcggga ggcgaaccgg caatggaccg ccttcaaggc cgcggcgagg
     2041 gcccactcgg atcccgaggc gctggcccgc atggatgcgc tcatggccta tgtggaccgg
     2101 gacctggacc acctggagca gctgctggtg gaagggcacc tggcctccct ggggcgcttc
     2161 gtggacgacg acc
//
LOCUS       DASUDT010000208         4881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_562388, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000208 DASUDT010000000
VERSION     DASUDT010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4881
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_562388"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VFV26_04345"
     CDS             complement(<1..1381)
                     /locus_tag="VFV26_04345"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX4845425.1"
                     /translation="MEGHARLLLDLALVLGVAALTSVLFQKLKQPAVLGYLLAGMIVG
                     PHVPVPLVADLGNVRLMGELGVILLMFTIGLEFSLPRLLRAGPPALLTGTLQVGTQLV
                     AGFLVARLLGWAPLESAFFAASLSIASTMILAKLFDERGIRGALKDTVLGVLLVEDLH
                     AVLLLAALTAAASLGGPSAGAIAGTLLKLAVFLAVLVGAGRLVVPRMVRWVADHARDE
                     VLLVVAAGLCFGLAQLAAWAGFSVAMGAFVAGMLVCESGRGRKVEHLVHPLRDLFAAM
                     FFVAVGMLMEPAVVARDWPLVLLFTALVIVVNALSVTVGATLAGLPLALGVRAGLALG
                     QVGEFGFILLSAGIGLGAVDPSRYALLAAICVATALTTPALLSAGEPAARLAERHLPL
                     ALKTYLGLYQSWASTLRAPALRKAPGAAVRRTFLQLLLDAILIGLVGVLAPRVMGMAT
                     AWLEGPGAFG"
     gene            complement(1386..2429)
                     /locus_tag="VFV26_04350"
     CDS             complement(1386..2429)
                     /locus_tag="VFV26_04350"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel protein"
                     /protein_id="HEX4845426.1"
                     /translation="MRAGVPFPRGQEEQQDAPVKRLRYALALLVAVIVAGALGYHWLS
                     RLNALDSLYMAITTLFTVGFRELGEVNARTKIFTILYLVIGLGVATYAISNLTALILE
                     GDLRGYILERRMQKRLDDLTDHVIVCGFGKMGFQAAWELKKAGIPFVIVEQDETKGRS
                     PRFAGELILYGNAMDELMLERAGIRRARGLITALTTDADNVLVTLTVKQMRADIPVVA
                     RSAKLGTERQLKAAGADHIVSPYEIGGRRMAGLLLKPEMMNFFDIVLQQEQLELGLER
                     IAIGPGSALVGQTLREARLRHATGALLVGLVHPGAGLRFNPSGDERFQSGDELLVMGP
                     SEALETLTRLAKG"
     gene            complement(2431..2874)
                     /locus_tag="VFV26_04355"
     CDS             complement(2431..2874)
                     /locus_tag="VFV26_04355"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX4845427.1"
                     /translation="MPKPQIPETLAPDLLERLRGRFHPWPLISGWGLTIESVEPGAAV
                     MVLVPTKAVINGSRGNVNGGVLATMADMVSALALSTAFDGAMPFATSDLHIRYLEPAR
                     GEVRGEAQVVRISGRSGIIECRLTCGDHLVALSTANFAIKPGLGG"
     gene            complement(2926..3510)
                     /locus_tag="VFV26_04360"
     CDS             complement(2926..3510)
                     /locus_tag="VFV26_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845428.1"
                     /translation="MALGLCAGMLSAQDVNTRSASFLMGMGLTVGGDKLASASFTDGS
                     SKSIKAGGLFYFKAGVDWQFQPRWSFQGSLGIHGDSVNATNGSLKFQRNFMEGLFHFD
                     TTRTQRFGCGLRKTSSARFTSSGAANVGDIDFDSKAGLVVEYEWFHKQGARGWGMSLR
                     YVNEKYTPSRVDGIPVSGPDVDGSHLGVGLSLYL"
     gene            complement(3736..4770)
                     /locus_tag="VFV26_04365"
     CDS             complement(3736..4770)
                     /locus_tag="VFV26_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEX4845429.1"
                     /translation="MTKISRAALFEALNAYTVPGTNASLATLKAVKGIDVTEGKVTVL
                     LQLMESYQDRVQAIKQALEELILNQPGVAAVDIEIGWEKMAQVEFKNLIPGIKRCVVV
                     GSGKGGVGKSTVTVNLAIAMAEQGLKVGLLDSDIYGPSIPMMLGLKDSPLGTPDGQIL
                     PLEKFGIKVMSMGLLIEEDRPVIWRGAMLNKALQQFLKDVAWGDLDVLFIDLPPGTGD
                     VQLTLIQNAQVDGAVIVSTPQDVAFLDAKKAIGMFGTVKVPVLGIVENMSSFICPGCG
                     KETQIFGHGGVKAAALRMELPFLGEVPIDLAIREGGDSGKPFVAEHPHSPQTKVFQDM
                     AGTLRAELKL"
BASE COUNT          835 a         1673 c         1649 g          724 t
ORIGIN      
        1 gcccgaaggc gcccggccct tccagccagg cggtggccat ccccatcacc cgcggggcga
       61 ggacacccac caggccgatg aggatggcgt ccagcagcag ctggaggaag gtccgccgca
      121 cggccgcgcc gggggccttg cgcagggccg gggcgcgaag ggtcgaagcc caggactggt
      181 ataggcccag gtaggtcttc agggccaggg gcaggtgccg ctccgccagc cgggccgcgg
      241 gctctccggc ggacagcagg gcgggcgtgg tcagggctgt ggccacgcag atggctgcca
      301 ggagcgcgta gcgggaggga tccacagcgc cgaggccgat gcccgcgctg aggaggatga
      361 acccgaactc ccccacctgc cccagggcga ggcccgcgcg cacgccgagg gccaggggca
      421 ggcccgcgag cgtggccccc acggtgacgg aaagcgcgtt cacgacgatg accagggcgg
      481 tgaagagcag caccagcggc cagtcgcgcg ccaccaccgc cggctccatc agcatgccca
      541 cggccacgaa gaacatggcc gcgaagaggt cccgcagggg gtggaccagg tgctccacct
      601 tgcgcccccg gccggattcg cagaccagca tgcccgccac gaaggcgccc atggccacgg
      661 agaagcccgc ccaggcggcg agctgggcca gcccgaagca gagccccgcc gccaccacca
      721 gcagcacctc gtcgcgggca tggtccgcca cccaccgcac catgcggggc accaccaggc
      781 gcccggcgcc cacgaggacg gcgaggaaca ccgccagctt cagcagggtg ccggcgatgg
      841 ccccggcgct gggacccccc agggaggccg ccgccgtgag ggccgccagc agcaggacgg
      901 cgtggaggtc ctccaccagg agcaccccca gcaccgtgtc cttcagcgcg ccgcggatgc
      961 cgcgctcatc gaagagcttg gccaggatca tggtggaggc gatggacagg ctcgccgcga
     1021 agaacgcgct ttccagcggc gcccagccca ggagcctcgc caccaggaag cccgccacca
     1081 gctgagtgcc cacctggagg gtccccgtga gcagggccgg gggcccggcg cgcagcagcc
     1141 tcggcaggct gaactccagg ccgatggtga acatcaggag gatgacaccc agttcgccca
     1201 tgagccgcac gttgccgagg tccgccacca ggggcaccgg cacgtggggg cccacgatca
     1261 tgcccgccag gaggtagccc aggaccgccg gctgcttcaa tttctggaac agcacggagg
     1321 tcagcgccgc cacgcccagc accagggcca ggtccaggag caggcgggcg tggccttcca
     1381 tggcttcagc ccttggccag ccgggtgagg gtttccaggg cctccgaagg gcccatgacc
     1441 agcagctcgt ccccggactg gaagcgctcg tcgccggagg ggttgaaccg caggcccgcg
     1501 ccgggatgca ccaggcccac caggagggcc cccgtggcgt ggcgcaggcg cgcctcccgc
     1561 agggtctggc ccaccagcgc ggatccgggg ccgatggcga tgcgctccag gcccagctcc
     1621 agctgctcct gctggagcac gatgtcgaag aagttcatca tctcgggctt gagcagcagg
     1681 cccgccatgc ggcggccgcc gatctcgtaa gggctcacga tgtggtcggc gcccgcggcc
     1741 ttcagctggc gctcggtgcc cagcttggcg ctgcgggcca ccacggggat gtccgcccgc
     1801 atctgcttca ccgtgagcgt caccagcacg ttgtccgcgt ccgtggtcag ggccgtgatg
     1861 agcccccggg cccgccggat gcccgcacgc tccagcatca gctcgtccat ggcgttgccg
     1921 tagaggatca gctccccggc gaagcggggg cttcggccct tggtctcgtc ctgctccacg
     1981 atgacgaagg ggatgcccgc cttcttcagc tcccaggcgg cctggaagcc catcttcccg
     2041 aagccgcaga cgatgacgtg atcggtgagg tcgtccaggc gtttctgcat gcggcgctcc
     2101 aagatgtagc ctctgaggtc gccctccagg atcagggcgg tcaggttcga gatggcgtag
     2161 gtggccacgc ccaggccgat gacgaggtag aggatcgtga agattttcgt ccgggcgttc
     2221 acctcgccca gctcccggaa tcccaccgtg aacagcgtgg tgatggccat gtacaggctg
     2281 tcgagggcgt tcaggcgcga aagccagtgg tagcccaggg cccccgccac gatgaccgcc
     2341 accagcaggg ccagggcata gcgcaggcgt ttcaccggcg cgtcctgctg ttcctcctgt
     2401 cccctgggga agggtacgcc agccctcatc tcagcctccc agcccgggct tgatggcgaa
     2461 gttggcggtg ctgagggcca ccaggtggtc gccgcaggtg aggcggcact cgatgatgcc
     2521 gctgcggccg gagatgcgca ccacctgggc ctcgccgcgc acctcacccc gggcgggctc
     2581 caggtagcgg atgtgcagat ccgacgtggc gaagggcatg gcgccgtcga aggcggtgct
     2641 cagcgccaag gcgctcacca tgtccgccat ggtggccagc acgcccccgt tcacgttgcc
     2701 gcggctgccg ttgatcacgg ccttggtggg caccagcacc atgaccgccg cgccgggctc
     2761 caccgattcg atggtgagcc cccacccgct gatgaggggc cagggatgga agcgcccacg
     2821 cagacgctcc agaagatccg gagcgagggt ctcggggatc tgcggcttgg gcatgcttga
     2881 gtgtagccgc cggaggctct tcggcgggtc tgtggagtct gaaacctaca ggtacaggct
     2941 cagccccacc cccaggtggc tgccatccac atccggaccg gacacgggta tgccatccac
     3001 cctggaaggg gtgtacttct cgttgacgta acgaaggctc atcccccagc cacgggcccc
     3061 ctgcttgtgg aaccactcat attcgacgac caggcccgcc ttgctgtcga agtctatgtc
     3121 gccgacattc gccgctccgc tggatgtgaa ccgggccgag gaggtcttcc ggaggccgca
     3181 gccgaagcgc tgggtccggg tggtatcaaa atggaagagc ccttccatga aattgcgctg
     3241 aaatttcagg gagccattgg tcgcattcac ggaatcaccg tggatgccaa gggagccctg
     3301 gaacgaccag cggggctgga actgccagtc caccccggcc ttgaaataga acaggccgcc
     3361 ggccttgatc gacttgctgg agccatccgt gaaactcgca ctggccagct tgtcaccgcc
     3421 gaccgtcagg cccatgccca tgaggaagga ggcggagcgg gtattcacgt cctgcgcgga
     3481 aagcatgccg gcacagaggc cgagcgccaa caggggggtc catcgagaca tggaagctcc
     3541 atgaaaatcg gcgggcactg ccgcctgaaa gtgaagggcc aaacaaacac ccacatggtc
     3601 aactatattt taattttccg tattttatgg cgttgcgtcc aggcggggtg cgccacaact
     3661 tctcgtgacc gcggaccaag cccatggcct gccccccttc aatgcagtca gtttctgcct
     3721 ggaaacgaat cctgatcaga gcttgagttc tgccctcagg gtcccggcca tgtcctggaa
     3781 gaccttggtc tgggggctgt ggggatgctc cgccacgaag ggcttgccgc tgtccccgcc
     3841 ctcgcggatg gccaggtcga tgggcacctc gcccaggaag ggcagctcca tgcgcagcgc
     3901 cgcggccttc acgccgccgt ggccgaagat ctgggtctcc ttcccgcagc cggggcagat
     3961 gaagctgctc atgttctcga cgatgcccag cacgggcacc ttcacggtcc cgaacatgcc
     4021 gatggccttt ttcgcgtcga ggaaggccac gtcctggggc gtgctgacga tgaccgcgcc
     4081 atccacctgg gcgttctgga tgagggtcag ctgcacgtcg ccggtgcccg gcggcaggtc
     4141 gatgaagagc acgtccaggt cgccccaggc cacgtccttc aggaactgct ggagagcctt
     4201 gttgagcatg gcgccgcgcc agatgaccgg ccggtcctcc tcgatgagca ggcccatgga
     4261 catgaccttg atgccgaact tctccagggg caggatctgg ccatcgggcg tgcccagggg
     4321 agaatccttc aggcccagca tcatggggat ggagggcccg tagatgtccg aatccaggag
     4381 gcccaccttg aggccctgct ccgccatggc gatggcgagg ttcacggtga cggtgctctt
     4441 gcccacgccg cccttgccgg agcccaccac cacgcagcgc ttgatgcccg ggatgaggtt
     4501 cttgaactcc acctgggcca tcttctccca gccgatctcg atgtccaccg ccgccacgcc
     4561 cggctggttg aggatcagct cctccagggc ctgcttgatg gcctgcacgc ggtcctggta
     4621 ggactccatg agctggagca gcaccgttac cttgccctcg gtgacatcaa tgcccttcac
     4681 cgccttgagg gtggcgaggc tggcgttggt cccgggcacc gtgtaggcgt tcagggcttc
     4741 gaacagggcg gcgcggctga tcttcgtcat gcggatctcc agcccattag tctgccacgg
     4801 agaatgaatg gccggcagct cagaacgcag cgcggaaccc ccggagagca ccagcgaggc
     4861 acggctatgc cgggccgagc g
//
LOCUS       DASUDT010000209         6590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_628681, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000209 DASUDT010000000
VERSION     DASUDT010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6590
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628681"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VFV26_04370"
     CDS             complement(<1..827)
                     /locus_tag="VFV26_04370"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX4845430.1"
                     /translation="MSHATGFLHEGRAYGLLAAAGLRVPRHGFLEAGPLPFEAGEPIV
                     LKGIADQLWHKSDKGAVHFGPFDAEALKAEAAAMQARVPEHPWIGGLVCEKVAFKRLA
                     GLPTEALISLKRDPDAGWLAVCGIGGLQADAWAALAPPMIWPLALCTPEQALADLREH
                     WLGHTWLGGQRGTEALTDESKLLAFLQGLWRAAEGLEQEGVTLLELNPVVLDSQGLPT
                     ALDGVGTLDASPAAPPATPDPAWYRALVAPRDLVIAGVSSREGTVGRIILENVQRAAL
                     "
     gene            complement(830..1429)
                     /locus_tag="VFV26_04375"
     CDS             complement(830..1429)
                     /locus_tag="VFV26_04375"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate oxidoreductase subunit beta"
                     /protein_id="HEX4845431.1"
                     /translation="MSDSRIHGIVLSGVGGQGVLSLAQILLEALRRSGLHALQSEIHG
                     MSQRGGSVHAQVCFSSVPLSSPIIEEGRAELLIALEPLEALRYVAMLAISGHLVVSEE
                     PQVNMEGYPPLDDVYGALKAVPGAHLVDTEDLARKLNHRQAGGMVLLGMASRFLPVDN
                     AVWREVISQRFEAKGARVCEKNLEAFEAGRGLIQETVGV"
     gene            complement(1426..3087)
                     /locus_tag="VFV26_04380"
     CDS             complement(1426..3087)
                     /locus_tag="VFV26_04380"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX4845432.1"
                     /translation="MVQSTLALGVEAVGCAAFDAGIKGAFGYPGTPSTEGFEAVEQLI
                     HHARDGRVAQWAANEKVAYDLAMGMSYAGFRTLVTMKHVGLNVAMDAYANSALTGVRG
                     GLVLLVADDPGMHSSQNEQDSRRLAEFAWLPCLEPSTVQECYDFTLQAFELSEALQVP
                     VMLRIVTRLAHCRAVLQRREALPPVGLGLAPEATIQDWVLIPSNARRRYVDLLAKQPR
                     MREAASALNRLAPGTVRRGVALAGMGRAYFSQLLHENPALAELPRLEIAAYPVDPTLE
                     EAFLAQVDEVVVFEEDYPVLEERLGLRGTAKVRGRLDGALPRTGELTPRLLKDALDLA
                     SPAGKALSGIDLPIRAPRFCDGCGHVDAYEALQEALANIGAPETRVFGDIGCYTLAAQ
                     EPMAAIHAVVEMGASISMAVGAALAGQTPSVAVIGDSTFGHSGLPALLTAADAGVNVT
                     VMILDNRVVGMTGQQPSQALDQVERMVRGMGIAEDQLQVLLPVPKQHGANVAAVEAAL
                     RHPGPSVVVFRRECIQSIRRGVLKEHDREEKALQEASCCGTEVQS"
     gene            3627..4991
                     /locus_tag="VFV26_04385"
     CDS             3627..4991
                     /locus_tag="VFV26_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845433.1"
                     /translation="MVLLATLMSATAWGQEVSLYGTTMAQMWKQETPGFDKSTYTPAT
                     QYLGIDATKLGTDKLSLHLFGWGRTDLSDPSTLDGSKSGGYLSFGYLQYRFDQANAEI
                     KAGRFAINQGAGFEQVDGVSARTDLKGGFAVSAFGGKPVYYKTVDPRNQDDYEFQRDF
                     IFGARLSWRMPKVGELGVSYLQDGTTAAKDLDIPSPVDYTRKQLGVDIRIAPASVFDL
                     RGRTLFDMAQHEDQPLGEEKRSRIAEHDYTATVKLGSQVSVSGNVVERNFYAYYAGTN
                     LPSLFRQDEKGKFKAWGGKVAWQASDAFQMVADYRHTSRETYGDVNRAGGELRWTLNE
                     KSLLFGVSGHWVNAATTLFVDAAAPSRSLSHKEGRMWVMATKGKLTMSLDGILQRYEG
                     SNPYLNGLTSVYEVVGSLGYQATTNIKVSGDISYGSTPVAKGETRGLLRAEYRFGFAK
                     KGVR"
     gene            4991..5464
                     /locus_tag="VFV26_04390"
     CDS             4991..5464
                     /locus_tag="VFV26_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845434.1"
                     /translation="MARKNVLQVFAIALGLGILTACSLISPETSFAATHPQELGAGRP
                     VCSECHSNDVAKGALKPYASFDHTPTFVKDHRFQAGQDSNTCASCHAQSFCADCHGGK
                     VPMKPAVRLGDRPDRATPHRGDYMTLHRMEGKMDPSSCYTCHGRANNDKCAACHR"
     gene            5494..6126
                     /locus_tag="VFV26_04395"
     CDS             5494..6126
                     /locus_tag="VFV26_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845435.1"
                     /translation="MSRMKLMAGSCFALVFALLAWGCAGTARNATAPVNTSTGQHPAT
                     WIQNHWAEYVKAPDQCRTCHGSTVDPAAAGGISKVSCFSCHTNGVNHPAGWADPAQHG
                     RAAKLAPSTNPTAMAGFAHCAKCHGTNFSEGLTISCKSCHTTAPHPGMPWHGTTASLT
                     NHITTDVSNAPECFKCHAGGANSTIKPVTPAPAGTAPGCTNATMCHGRGF"
     gene            6251..>6590
                     /locus_tag="VFV26_04400"
     CDS             6251..>6590
                     /locus_tag="VFV26_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845436.1"
                     /translation="MQHKPLKQLCGFIATAAIALVLVGCNGKTGPAGAPGAPGTNGTN
                     GTNGTNGTNATLMVDAAQLTPEQWAALKPVGTITGVTMGGAPVVNFRLTDAAGNGIKG
                     LGAFTSKSSTA"
BASE COUNT         1108 a         2272 c         2177 g         1033 t
ORIGIN      
        1 agggcggcgc gttggacgtt ctcgaggatg atgcggccca cggtgccttc gcggctggac
       61 acgcccgcga tgacgaggtc ccggggggcc accagggccc ggtaccaggc gggatcaggg
      121 gtcgcggggg gcgcggcggg gctggcgtcc agggtgccca cgccatccag ggccgtgggc
      181 aggccctggc tatcgagcac cacgggattg agttccagga gggtgacgcc ctcctgttcg
      241 aggccttccg ccgcgcgcca cagcccctgg agaaaggcca ggagcttgga ttcgtcggtg
      301 agggcctcgg tgccgcgctg gcctcccagc caggtgtgtc ccagccagtg ctcgcgcagg
      361 tccgccaggg cctgctccgg ggtgcagagg gccaggggcc agatcatggg cggggccagg
      421 gcggcccagg cgtcggcctg gagcccgccg atgccgcaga ccgccagcca gcccgcatcc
      481 ggatcccgct tgagggaaat gagggcctcc gtgggcaggc ccgccaggcg cttgaaggcc
      541 accttctcgc agaccaggcc gccgatccag gggtgctcgg gcacgcgggc ctgcatggcg
      601 gcggcctcgg ccttcagggc ttccgcatcg aagggtccga agtggacggc gcccttgtcg
      661 gacttgtgcc agagctggtc cgcgatgccc ttgagcacga tgggctcgcc ggcctcgaag
      721 ggcaggggcc cggcttccag gaacccgtgc ctcggcaccc gcaggcccgc ggcggcgagc
      781 aggccatagg cccgcccctc gtggaggaat cccgtggcgt ggctcatcat caaactccta
      841 ccgtttcctg gatgaggccc cgtccggcct cgaaggcttc gaggttcttt tcgcacacgc
      901 gggcgccctt ggcctcgaag cgctgggaga tcacctcgcg ccagacggcg ttgtccacgg
      961 gcaggaaccg ggaggccatg cccagcagca ccatgccgcc ggcctggcgg tggttgagct
     1021 tgcgggccag gtcctcggtg tccaccaggt gggccccggg cacggccttc agggctccgt
     1081 agacatcgtc caggggcgga tagccttcca tgttcacctg gggctcctcg gagaccacca
     1141 ggtgcccgct gatggcgagc atggcgacgt agcgcagggc ttcgaggggc tcgagggcga
     1201 tgaggagctc ggcgcggccc tcctcgatga tgggggagct gaggggcacg ctggagaagc
     1261 acacctgggc gtggacgctg ccaccccgct ggctcatgcc gtggatctcg gactgcaggg
     1321 cgtggaggcc gctgcggcgc agggcctcca ggaggatctg cgcgagggag agcacgccct
     1381 gtccccccac gccggacagg acgatgccgt ggatgcggga atcgctcatg actggacctc
     1441 cgtgccgcag caggaggctt cctgcagggc cttctcctcc cggtcgtgct ccttcagcac
     1501 gccccggcgg atggactgga tgcattcgcg gcggaacacc accaccgagg ggcccggatg
     1561 ccgcagggcg gcctccacgg cggccacgtt ggccccgtgc tgcttgggca cgggcaggag
     1621 cacctggagc tggtcttcgg cgatgcccat gccgcgcacc atgcgctcca cctggtcgag
     1681 ggcctggctg ggctgctggc ccgtcatgcc caccacgcgg ttgtcgagga tcatcacggt
     1741 gacgttcacg cccgcatcgg ccgccgtgag cagggccggc aggccgctgt ggccgaaggt
     1801 ggaatcgccg atgacggcca cggaaggcgt ctggcccgcc agggcggcgc ccacggccat
     1861 gctgatgctg gcgcccatct cgaccacggc gtggatggcg gccatgggtt cctgggcggc
     1921 cagggtgtag cagccgatgt ccccgaagac gcgggtctcc ggggcgccga tgttggccag
     1981 ggcctcctgg agggcctcgt aggcgtccac atggccgcag ccgtcgcaga accggggggc
     2041 gcggatgggc aggtcgatgc cggagagggc ctttccggcg ggggaggcca ggtcgagcgc
     2101 gtccttcagc aggcgggggg tgagctcccc ggtgcggggc agggcgccat cgaggcggcc
     2161 gcggaccttc gcggtgccgc ggaggcccag gcgctcctcc agcacggggt agtcctcctc
     2221 gaagaccacc acctcgtcca cctgggccag gaaggcctcc tccagagtgg gatccacggg
     2281 gtaggcggcg atctccaggc ggggcagctc cgccagggcg gggttctcgt ggagcagctg
     2341 gctgaagtag gcccggccca tgccggccag ggcgacgccc cggcggacgg tgcccggagc
     2401 caggcggttg agggcggagg cggcctccct catgcggggc tgcttggcca gcaggtccac
     2461 atagcggcgg cgggcgttgg aggggatgag cacccagtcc tggatggtgg cttccggagc
     2521 caagcccagg cccacggggg gcagggcctc ccggcgctgc aggacggccc ggcagtgggc
     2581 caggcgggtg acgatgcgca gcatcacggg cacctggagg gcctcggaca gctcgaaggc
     2641 ctggagggtg aagtcgtagc actcctggac cgtgctgggt tccaggcagg gcagccaggc
     2701 gaactccgcc aggcggcggc tgtcctgctc gttctggctg ctgtgcatgc cggggtcgtc
     2761 ggccaccagg aggaccagac cgccccggac gcccgtgagg gccgagttgg cgtaggcgtc
     2821 catggccacg ttcagcccca cgtgcttcat ggtcaccagg gtgcggaagc ccgcgtagct
     2881 catgcccatg gccaggtcgt aggccacctt ctcgttggcg gcccactggg ccacccggcc
     2941 gtccctggcg tggtgaatga gctgctcgac ggcctcgaag ccctcggtgg atggcgtgcc
     3001 cgggtacccg aacgcgccct tgatgccggc atcgaaggca gcacaaccca ccgcttcgac
     3061 ccccagcgcg agggtgctct gaaccatgaa aacctccatc ttttccaagg gggaagtatg
     3121 tggaactgcg gccgtgtctg gggtcacacg gacggaatga gcggccgggt gtgtcggggg
     3181 tcacaggggc cggactggcc agcagaccgg ccctccctcc ggaagcaggg aggtgggaac
     3241 cttcgcccag tgtcaaaggt cacaagtttg tccgaactgg tgaaatctgt ttcgacttca
     3301 atattttcta tgtctgcaac ttgtcaattt aattttatta aaattcattg ttttcagtct
     3361 ttaaaaaaca acttgattgt cgcaaattga tcattgtttg tttcttttga accataaagg
     3421 catgtagaca aattccattt gcacccttga ggtggccaga gtgctggcta tagtttggtt
     3481 tctgacacgg gcatcagctt tctcgccggc tgtccggtgc gcactggcaa ggcgttccaa
     3541 agatccccgg ttccgctcct tccgctatcc caccccggtc cattcacgcc acccgcatga
     3601 ggcgaatcat gaagccacga acccaagtgg tcctgcttgc caccctgatg tcagctacgg
     3661 cctggggcca ggaggtaagc ctctacggca ccaccatggc ccagatgtgg aagcaggaga
     3721 cgccgggctt tgacaagagc acctacactc ctgccacgca gtacctgggc atcgacgcca
     3781 ccaagctggg caccgacaag ctgtcgctgc acctcttcgg atggggccgc acggacctga
     3841 gcgatccctc caccctcgac ggatcgaagt ccggcggcta cctcagcttc ggatacctgc
     3901 agtaccggtt cgaccaggcc aatgccgaga tcaaggcggg ccgcttcgcc atcaaccagg
     3961 gcgcaggctt cgagcaggtg gatggcgtga gcgcccgcac cgacctcaag ggcgggttcg
     4021 cggtctccgc cttcggcggc aagccggtct actacaagac ggtggatccc cggaaccagg
     4081 acgactacga gttccagcgc gatttcatct tcggcgcccg tctctcctgg cgcatgccga
     4141 aagtcggcga gctcggcgtc tcctacctcc aggacgggac tacggccgcc aaggacctcg
     4201 acatcccctc gcccgtggac tacacgcgca agcagctggg cgtcgacatc cgcatcgccc
     4261 ccgcctccgt cttcgacctc cgcggccgca ccctcttcga catggcccag cacgaggacc
     4321 agcctctggg cgaggagaag cgctcccgca tcgccgagca cgactacacc gccacggtga
     4381 agctgggcag ccaggtttcc gtctcgggca acgtggtcga gcggaacttc tacgcctact
     4441 acgccgggac caacctcccc tccctcttcc gccaggatga gaagggcaag ttcaaggcct
     4501 ggggcggcaa ggtcgcctgg caggcctcgg acgcattcca gatggtggcc gactaccggc
     4561 acacgagccg tgagacctac ggtgatgtga accgggcggg cggcgaactc cgctggaccc
     4621 tcaacgagaa gtccctcctg ttcggggttt ccggccactg ggtgaacgcg gcgaccacgc
     4681 tgttcgtgga tgccgcggcg ccttcccgca gcctgtccca caaagaaggc cgcatgtggg
     4741 tgatggccac caagggcaag ctcaccatga gcctggatgg catcctgcag cgctacgagg
     4801 gctccaaccc gtatctgaac gggctcacgt ctgtctatga agtggtgggt tcgctgggct
     4861 accaggccac cacgaacatc aaggtctcgg gtgatatcag ctacggcagc acccccgtcg
     4921 ccaagggcga gacccggggt ctgctgcggg ccgagtaccg gttcggcttt gctaagaagg
     4981 gagtccgcta atggcccgga agaacgtcct ccaggttttc gccatcgcgc tggggctcgg
     5041 cattctgact gcctgcagcc tcatttcgcc tgaaacgagc tttgcggcca cccaccccca
     5101 ggaactgggc gcgggtcgtc ccgtctgctc ggaatgccac agcaatgatg tggccaaggg
     5161 cgccctcaag ccctacgcgt ccttcgacca cacgcccacc ttcgtgaagg accaccgctt
     5221 ccaggccggc caggactcca acacctgcgc ctcctgccac gcccagtcct tctgcgcgga
     5281 ctgccacggc ggcaaggtgc ccatgaagcc cgccgtccgc ctcggcgacc gtcctgaccg
     5341 ggccacgccg caccggggcg actacatgac cctgcaccgc atggaaggga agatggatcc
     5401 gtccagctgc tacacctgcc acggccgcgc caacaacgac aagtgcgccg cttgtcaccg
     5461 gtagggatcc gcaacgtgtc caaggggaac accatgagcc gaatgaaact gatggctgga
     5521 agctgtttcg cgttggtttt cgcgcttctt gcctggggct gtgccggaac cgcccggaat
     5581 gccaccgctc cggtcaacac ctcgaccggg cagcacccgg ccacctggat ccagaaccac
     5641 tgggccgagt acgtgaaggc accagaccaa tgccgcacct gccacggatc gaccgtcgat
     5701 cccgcggccg ctggcggcat ctccaaggtc agctgcttca gctgccacac caacggcgtg
     5761 aaccacccgg ccggctgggc ggaccctgcg cagcacggca gggccgcgaa gctcgcgcca
     5821 agcacgaacc cgacggccat ggcgggcttc gcccactgcg ccaagtgcca cggcaccaac
     5881 ttcagcgagg gcctcaccat ctcctgcaag tcctgccaca cgaccgcgcc gcaccccggc
     5941 atgccctggc atggcaccac ggcctccctt accaaccaca tcaccacgga tgtcagcaac
     6001 gcgcccgagt gcttcaagtg tcacgccggc ggtgccaact ccaccatcaa gcccgtgacg
     6061 ccggctcccg ccggaacggc cccagggtgc accaacgcca ccatgtgcca cggccgcggc
     6121 ttctgaggcc catctccgag cttctgtcca tgtccccaaa ggaggtgccc tatctggtgg
     6181 atctgcttga cgctttccca accctcgcac caacccgcag tacatccgat tctttaaggg
     6241 agaacacagc atgcaacaca aacctctgaa acagctctgc ggcttcatcg ccaccgcagc
     6301 gatcgccctc gtgctggtcg gctgtaatgg caagaccggc cccgccggcg cgcccggcgc
     6361 gcccggcacc aacggcacca acggcacgaa cggcaccaac ggcaccaacg cgacccttat
     6421 ggtcgatgcc gctcagctga cccccgagca gtgggcggcc ctcaagcccg tgggcaccat
     6481 caccggtgtc accatgggcg gcgctccggt ggtcaacttc cgcctgactg acgctgcggg
     6541 caacggcatc aagggcctcg gcgccttcac ctccaagagc tccaccgcca
//
LOCUS       DASUDT010000210         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1865836, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000210 DASUDT010000000
VERSION     DASUDT010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1865836"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VFV26_04405"
     CDS             <1..384
                     /locus_tag="VFV26_04405"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4845437.1"
                     /translation="LGTLLASIPPYWAPMKAMFTKRMGDTEAILKERSPLYKAGDIVR
                     PLLIAQGANDPRVKQAESDQIVAAMRKNGQTVDYLLFPDEGHGFARPENRMKFYAAAE
                     AFLAQHLGGRVEAPLAAEVWDALKK"
     gene            complement(440..1750)
                     /gene="xseA"
                     /locus_tag="VFV26_04410"
     CDS             complement(440..1750)
                     /gene="xseA"
                     /locus_tag="VFV26_04410"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX4845438.1"
                     /translation="MDAPLSVKRLLEQVKARLEPPFAAVCVVGEVSNFRGSGKHWYFT
                     LKEEGAALSCAVWAGQQRFLQHRPADGQRVVLKGSLNLYVAGGTITLAVTHCEPAGVG
                     DLQARLRALEADLRAQGLFDRPKRPLPRFPKKLGIVAAMGGAALRDVLEVAARRAPGI
                     HLLIAPAAAQGERCVPETLLAIQELQDPHWGCEALLLVRGGGSLEDLWAFNDPELVRA
                     VAECRIPVITGVGHEIDTTLVDLAADRRAATPSQAAELATPDRAALGAELRRRVEALT
                     AKAAWRLRGLETTLNLLTDHGLQRAEPLAAPGARLAALGQRLALAHPSRGLDAAGGRL
                     ALLRQRLGQAAGKAAGDLDLPRVREARRALAPAVLRGLQQRDQRLAVLVERLRGLDPT
                     GPLQRGFVLALDAEGRPVTAAQAQPAGAGLRLRWADGERKATLD"
BASE COUNT          290 a          771 c          721 g          273 t
ORIGIN      
        1 ctgggcaccc tgctggcctc catcccgccc tactgggccc ccatgaaggc catgttcacc
       61 aagcgcatgg gcgacaccga ggccatcctt aaggagcgca gcccgctcta caaggccggc
      121 gacatcgtgc ggcccctgct catcgcccag ggcgccaacg atccccgtgt gaagcaggcc
      181 gagagcgacc agatcgtggc cgccatgcgc aagaacggcc agaccgtgga ctacctgctg
      241 ttccccgatg agggccacgg cttcgcccgc cccgagaacc gcatgaagtt ctacgccgcc
      301 gccgaggcct tcctggccca gcacctgggc gggcgcgtgg aggcgcccct ggctgcggag
      361 gtctgggacg cgctgaagaa gtagaccgga gcgaagcatg cagcgggcgg ctccggccgc
      421 ccgccttgcg ctggaagcct cagtccagcg tggccttccg ctcgccatcg gcccagcgca
      481 ggcgcaggcc cgcgcccgcg ggctgggcct gcgccgcggt cacgggacgg ccctcggcgt
      541 ccagggccag cacgaagccc cgctgcaggg ggcccgtggg atccaatcca cgcagccgtt
      601 ccaccagcac ggccaggcgc tggtcgcgct gctggagtcc ccgaaggacc gccggggcca
      661 gggcccgccg ggcctcgcgc acccgcggga gatccaggtc tccggcggcc ttcccggcgg
      721 cctggcccag gcgctggcgc agcagggcca ggcgcccgcc cgcggcatcg agcccgcggc
      781 tggggtgggc cagggccagg cgctggccca gggcggccag ccgggctccc ggtgccgcca
      841 gcggttccgc ccgctggagg ccgtggtccg tgagcaggtt gagcgtggtc tccaggcccc
      901 gcaggcgcca ggcggccttg gccgtgaggg cttccacccg ccgccgcagc tcggcgccca
      961 gggccgcccg gtccggtgtg gccagttccg cggcctggct gggggtggcg gcgcggcggt
     1021 ccgcggccag atccaccagg gtggtgtcga tctcgtggcc cacgccggtg atgacgggga
     1081 tgcggcactc ggccacggcc cgcaccagct cgggatcgtt gaaggcccag aggtcctcca
     1141 ggctgccgcc gccccgcacc agcagcaggg cctcgcagcc ccagtgggga tcctggagtt
     1201 cctggatggc gaggagcgtc tccggcacgc agcgctcgcc ctgggccgcc gcaggggcga
     1261 tgagcaggtg gatgcccggc gcccggcggg ccgccacctc cagcacatcg cgcagggccg
     1321 cgccgcccat ggccgccacg atgccgagct tcttcgggaa gcggggcagg gggcgcttgg
     1381 gccggtcgaa gaggccctgg gcgcgcaggt ccgcctccag cgcccgcagc cgcgcctgca
     1441 ggtcgcccac gcccgcgggc tcgcagtgcg tgaccgccag cgtgatggtc ccgcccgcca
     1501 cgtagaggtt gaggctgccc ttgagcacca cccgctggcc atccgccggc ctgtgctgga
     1561 ggaagcgctg ctgccccgcc cacaccgcgc aggacagcgc cgcgccctcc tctttcagcg
     1621 tgaagtacca gtgcttcccc gagccccgga aattcgacac ctcccccacc acgcacaccg
     1681 ccgcaaacgg cggctccagc cgggctttca cctgctccag caggcgcttg acggagagcg
     1741 gggcgtccat gcccgaatga tcgcatggga agcagaaagg caggttcagc cacggatgaa
     1801 cacagatgaa cacggatggg atcgggttat tgatctgtgt ccatccgtgt tcatctgtgg
     1861 ctcattccgc cttcatcttt cgctaaggta ggggcatgtc ccccgcgctc gatgccttcc
     1921 tgaagacctg gcgagggtcc gccggcaacg agcgggccaa cttccagtcc ttcctgcgcg
     1981 acttctgcgc ggccctggag ctgccggtgc ccgagcccaa gggcgtggag tccacccact
     2041 gcttcgagaa ggatc
//
LOCUS       DASUDT010000211         4191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2064701, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000211 DASUDT010000000
VERSION     DASUDT010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4191
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2064701"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VFV26_04415"
     CDS             complement(<1..772)
                     /locus_tag="VFV26_04415"
                     /inference="COORDINATES: protein motif:HMM:TIGR04519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-variant-translocated molybdopterin
                     oxidoreductase"
                     /protein_id="HEX4845439.1"
                     /translation="MKTRLPEHGPLETPQFWRTLEERLETPEAQQAAHDEFLPGAVPS
                     PYDDVHGLPVQDQSGFSRRDFLGLVTASAALAATVACDRKGQGTVVPYTKRPVEVVPG
                     VANYYASAHQEGRRVYPVLVKTREGRPIHLTGNDEHPGVKGKTSPRTMADVLRLYDPD
                     RLRAPKSDGRIVGWAEAESRLQGAVKDAKAAGKAVLLISGAVASPSRRALLADLKAAL
                     PTLEHLAYEPAAGDAAEVAAQASYGQAVDLQPRLDKAKV"
     gene            complement(777..956)
                     /locus_tag="VFV26_04420"
     CDS             complement(777..956)
                     /locus_tag="VFV26_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845440.1"
                     /translation="MADVNRKPILDRATALLAGPFLLGQRALGLAFLKEEGPPPDAAP
                     RISITPPDHAIKRRG"
     gene            complement(973..1536)
                     /locus_tag="VFV26_04425"
     CDS             complement(973..1536)
                     /locus_tag="VFV26_04425"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4845441.1"
                     /translation="MHRFDRAFRFVLPAGALAVLITVVSVGWITQPDRFAKGYAPEQP
                     IPFSHQLHAGTLKMQCQYCHSGVDKSRHAGIPSVDLCMGCHKVTKTDRPAIQKLARIA
                     ASGEPLPWQRVHTLPDHVFFDHRPHVNAGIACQSCHGEVQTMKVITREMGMRMGNCLA
                     CHRDPHAALPAGSKITKGAEHCAACHR"
     gene            complement(2041..2664)
                     /locus_tag="VFV26_04430"
     CDS             complement(2041..2664)
                     /locus_tag="VFV26_04430"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX4845442.1"
                     /translation="MTETVPGLPETALQPLILASSSPRRRHWLEAMRIPFEIQTPQVD
                     ETPLLDEEPGDLVLRLAELKAEVVARRNPGRWVMAADTTVAVDHHTLNKPEDVEDAVR
                     MLTLIQGRAHQVHTGFCLQKNDTTHSFVDTAQVVFRPLTEAQIRWYIATREPMDKAGS
                     YAIQGIGALFIEGVEGSFSTVMGLPVERMGALFLQLGLLKPWMGFPR"
     gene            complement(2661..3161)
                     /locus_tag="VFV26_04435"
     CDS             complement(2661..3161)
                     /locus_tag="VFV26_04435"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4845443.1"
                     /translation="MDRDFLVPEPLSTPHGTVAFFDETWSVDPRELQIFFQAEEVYWT
                     ADRTIGQWRRLLACSRMLTARLVPEGHRGGRLVGATRLWSDHAYEAKLYDVVTARDLM
                     GQGIATELVKWALRHPWAGEVQRFVLETRDAAAFYPRFGFRLGAEADSLHMRVGAAEL
                     EQRGLR"
     gene            complement(3161..>4191)
                     /gene="lnt"
                     /locus_tag="VFV26_04440"
     CDS             complement(3161..>4191)
                     /gene="lnt"
                     /locus_tag="VFV26_04440"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX4845444.1"
                     /translation="AFLGASGLSALAWGAGAWAAATLAGGGSLRRAMAGPGLAVAFLV
                     LAGGAWHLLPRDAERRLDVAMIQPNFPPGQRWLGMEAEMWRRSDALLKAQGWPRSGRA
                     TLLLWPESSILGRDDRHADARLYAEAATRGVAWLFGTEGGPYNLVRGEAAGRPVFLFA
                     KTDPMPFGERTPGPAAFRHWMDRQMGFVSQEAGELTAGCAFSIPTPSGEVRVHPLICS
                     EALLPGRTRRGLALGRADLLANHTNDGWFDRSIATDLHAAQIRLRAPELGVPLLRATL
                     SGKSGVFREDGGFELWGEPLSEGAYAVPLQWRPVRTPARSAWLVPFLVALLLGGLLIG
                     WKAQPRKA"
BASE COUNT          607 a         1344 c         1590 g          650 t
ORIGIN      
        1 tgaccttggc cttgtccagc cggggctgga ggtccacggc ctggccgtag ctggcctggg
       61 cggccacctc ggcggcgtcg ccggcggcgg gttcgtaggc caggtgttcc agcgtgggca
      121 gggcggcctt gaggtccgcc agcagggccc tgcggctggg ggaggccacg gcgccggaga
      181 tgagcagcac ggccttgccg gcggccttgg cgtccttcac ggcgccctgg aggcgggact
      241 cggcttccgc ccatccgacg atgcgcccat ccgacttcgg cgcgcgcagg cggtccggat
      301 cgtagaggcg cagcacgtcg gccatggtgc gggggctggt cttgcccttc acgccggggt
      361 gctcgtcgtt gcccgtgagg tggatggggc ggccctcgcg ggtcttcacc agcacgggat
      421 agacgcggcg gccttcctgg tgggcgctgg cgtagtagtt ggccacgccg ggcaccactt
      481 ccacggggcg cttggtgtag ggcaccacgg tgccctggcc cttgcggtcg caggccacgg
      541 tggcggccag ggcggcggaa gcggtcacca gacccaggaa gtcgcggcgg gagaacccgc
      601 tctggtcctg gacgggcagg ccgtggacgt cgtcgtaggg ggaggggacc gcgccgggca
      661 ggaactcgtc gtgggcggcc tgctgggcct caggggtttc gagacgctct tcgagggtcc
      721 gccagaactg cggggtctcg agggggccgt gttcggggag gcgtgtcttc atcggatcat
      781 ccgcggcgct tgatggcgtg gtcagggggc gtgatggata tgcggggggc ggcgtccgga
      841 ggcggcccct cctccttcag gaaggccagg cccagagcgc gctgccccag gaggaagggg
      901 cccgccagca gcgcggtggc ccggtcgagg atcggcttgc ggttcacatc ggccatcgtc
      961 ggatctccag atctagcggt ggcaggcggc gcagtgctcg gcgcccttgg tgatcttgga
     1021 gcccgcgggc agggcggcat ggggatcgcg gtggcaggcc aggcagttgc ccatgcgcat
     1081 gcccatctcc cgggtgatca ccttcatggt ctgcacctcg ccatggcagc tctggcaggc
     1141 gatgcccgcg ttcacgtggg gccggtggtc gaagaagacg tggtcgggca gggtgtggac
     1201 ccgctgccag ggcaggggct cgccggaggc ggcgatcctg gccagcttct ggatggcggg
     1261 gcggtcggtc ttggtgacct tgtggcagcc catgcagaga tcgacgctgg ggatgcccgc
     1321 gtgccgcgac ttgtcgacgc ccgagtggca gtactggcac tgcatcttga gggtgccggc
     1381 gtggagctgg tgggagaagg ggatgggctg ctcgggggca tagcccttgg cgaagcggtc
     1441 cggctgggtg atccagccca cggagaccac cgtgatcagg accgccaggg ccccggccgg
     1501 caggacgaag cggaatgctc ggtcgaatcg atgcatgcac aacccctgga gagtgcggat
     1561 ccacgaagag gcgagggcca tcgggagcgg ataggacggt tggacgccgg gctggtatgg
     1621 agggtgccgc ggagattctg gcacgcaccg gaggggcggg tgggaattcc cgcagcaacc
     1681 ggcgcctccg cccggggaat gtcggttcga tgttgtccag gtaaaaaaag agacaacagc
     1741 gagatccaga ggatgtgggt cacactggag cgacattctg tgaattgtgt cgcagatcac
     1801 gatgatagat cagtgccatt ggattgttta cctatttttt ctgagcaagt tccacgcttt
     1861 aagaggattt ttgggtggtc tatctgcatc gttccggaac ggagcgattt cctccaggga
     1921 gagggcaggt ggtccggggc cacatcctcc ggtggccggg gcgactgctc cctgcggaga
     1981 ttccttcccg gaacctcttc tttgccaatc atttcaggct tttctggggg tctgaccacc
     2041 ctacctgggg aaacccatcc agggtttcag caggcccagc tggaggaaca gggcgcccat
     2101 gcgctccacg ggcaggccca tgaccgtgga gaagctgccc tccacgccct cgatgaagag
     2161 ggctccgatg ccctggatgg cgtacgaacc ggccttgtcc atgggctccc gggtggcgat
     2221 gtaccagcgg atctgggcct ccgtcagggg ccggaagacc acctgggccg tgtccacgaa
     2281 gctgtgggtg gtgtcgttct tctgcaggca gaagcccgtg tgcacctggt gggcccgccc
     2341 ctggatgagc gtcagcatcc gcacggcatc ttccacatcc tcgggcttgt tcagggtgtg
     2401 gtggtccacg gccaccgtgg tgtcggcggc catgacccag cggcccgggt tgcggcgggc
     2461 caccacctcg gccttcagtt ccgccaggcg cagcaccagg tcgcccggct cctcgtccag
     2521 caggggtgtc tcgtccacct ggggagtctg gatctcgaag gggatgcgca tggcctccag
     2581 ccagtggcgg cggcgggggc tgctgctggc caggatgagg ggctgcaggg cggtttcggg
     2641 caggcccggg acggtctccg tcatcgcagg ccccgctgct ccagttccgc agcgcccacc
     2701 cgcatgtgga ggctgtcggc ctccgccccc aggcggaagc cgaagcgggg gtagaacgcc
     2761 gccgcatccc gggtttcgag gacgaagcgc tgcacctcgc cggcccaggg atggcgcagc
     2821 gcccatttca ccagttcggt ggcgatgccc tggcccatca gatcccgcgc cgtcaccaca
     2881 tcgtagagct tggcctcgta ggcgtgatcg gaccagagcc tggtggcgcc caccaggcgg
     2941 ccgccccggt ggccttcggg caccaggcgg gccgtgagca tgcgggagca ggcgaggagc
     3001 cgccgccact ggccgatggt gcggtcggcg gtccagtaga cctcttccgc ctggaagaag
     3061 atctgaagtt cgcggggatc cacgctccag gtttcgtcga agaacgccac ggtgccgtgg
     3121 ggcgtcgaca ggggctctgg tacgaggaaa tcgcgatcca tcaggccttc ctgggctggg
     3181 ccttccatcc tatcagcagg ccgccgagga gcagggccac gaggaaaggc accagccacg
     3241 cggaccgggc cggggtgcgc accggccgcc actgcagggg caccgcgtag gcgccttcgc
     3301 tgaggggttc tccccagagc tcgaagccac cgtcctcgcg gaacacgccg gacttgcccg
     3361 agagggtggc ccgcagcagg ggcacgccca gctccggggc ccgcaggcgg atctgggccg
     3421 catggaggtc cgtggcgatg ctgcggtcga accagccatc gttggtgtgg ttggccagca
     3481 gatccgcccg gcccagggcc aggccccggc gggtgcgccc gggaaggagg gcctcgctgc
     3541 agatgagcgg atggacgcgc acctcccccg agggcgtggg gatgctgaag gcgcagcctg
     3601 cggtcagttc cccggcctcc tgggagacga agcccatctg ccggtccatc caatggcgga
     3661 aggccgccgg gcctggcgtg cgttcaccga agggcatggg gtccgtcttg gcgaagagga
     3721 acacggggcg gcccgccgcc tcgccccgca ccaggttgta gggcccgccc tcggtgccga
     3781 agagccaggc caccccgcgg gtcgcggcct cggcgtacag gcgcgcatcg gcgtggcggt
     3841 catcccggcc caggatggag ctttccggcc agagcaggag ggtggcccgc ccggaccggg
     3901 gccatccctg ggccttcagc agcgcgtcgc tgcgccgcca catctcggct tccatgccca
     3961 gccagcgctg gcccgggggg aagttgggct ggatcatggc cacatcgagc cggcgctcgg
     4021 cgtcccgggg cagcaggtgc caggcgcccc ccgcgaggac caggaatgcg acggccaggc
     4081 cggggcccgc catggcccgg cggagggagc cgcctccggc gagggtggct gccgcccagg
     4141 ccccggcgcc ccaggccagg gccgacaggc ccgaggcccc caggaaggct g
//
LOCUS       DASUDT010000212         3205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_142710, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000212 DASUDT010000000
VERSION     DASUDT010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142710"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1287
                     /locus_tag="VFV26_04445"
     CDS             <1..1287
                     /locus_tag="VFV26_04445"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX4845445.1"
                     /translation="ALAPNSYRVRRLMDDDESYNYAIPPTEHAGGAYQIELVIEKIQQ
                     PTWPLEVPEAPLADQGHGEGPSLEELNAKLGVIFTDLRGAVTMLSGEQDKASGRLTSI
                     ARQIGGARREWDATGPVAAVEAATLADYLRPDAVPAQEVITTTRFFRNRRQLKALLDQ
                     LKGRGAASPPHVLVAGTSRGCEAYSLAIEAELAGLDLSITAIDIDAENIAAASAGIYT
                     TADFTDFDGTNLLPKEATGYFLRNGDLIQVDPGTLRNPPYFKVDDLFRHEGLYDAVIC
                     NNVLIHFSDAAAGQALARLDLLVSDGGILAVGGAPLDVLAGYLGARRTFRPIETAMEA
                     IWEDWKGDRQSWALDPGSYVGMPPIDQTLPDWKVRFCTLFRKEGLGFGGSGQDPKELG
                     RWLGGVEGALQGVAQGQATISSSARTIVEYLDDLLK"
     gene            complement(1294..3063)
                     /locus_tag="VFV26_04450"
     CDS             complement(1294..3063)
                     /locus_tag="VFV26_04450"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845446.1"
                     /translation="MALPPPSASRVPAAPEARDQTVYAIERLGGLGDVIMALSAVAAL
                     RAHEPHSIILFHTEPRYAELVKHSPHVDRVFTSSTEFNVVIQEYTRKNHFVSQHRLNG
                     IAYGINKLHQVDAFLEALGLHAFPEHKSAVVAWPGKVMAQSQAKVQAALAGRPGRRII
                     LHPANGDRNRKWSAAHWNALADRIIQSGDTPVLTGDDSAVPFKGILKLAPRPQMVDLT
                     NRLSLPDLVALCQACDAFVSPDSGPVQVAGLTDIGIVGIYSTVPARCRLPFRHGQFGW
                     RALGLVGDCPKAGCYHLFLKDGPEQQGLQDAIHQDLLHPGCQATNQFMGDYCPNQQTP
                     YCCLEQVEPDMVWEACRRLADLDLASLAEARGRWQAAMDARAWPEAIPALEQHLALFP
                     TADIAFRLALAQHQAGNHAKALELLMDSLAKGPTAEGLNLLGLITFAWGNHPEAENHF
                     ASAHRWMAPFAPAAANLALLEARTCLKEGRFSEGFSALAEYGRIRGDVKEPWLPHLLP
                     AGEADLIRGYLILGISSGDTALKSFISAYMEKPTSHEAAFGLGEALRQKGNQEEAGKW
                     YRTALKLAPGFQPAQERLAAQAD"
BASE COUNT          516 a         1008 c         1179 g          502 t
ORIGIN      
        1 gccctggccc cgaacagcta ccgggtccgg cgcctgatgg atgacgacga atcctacaac
       61 tacgccattc cgcccaccga gcatgcaggt ggggcgtacc agatcgagct ggtcatcgag
      121 aagatccagc agcccacctg gccgctggag gtcccggaag cgccactggc ggaccaggga
      181 cacggggaag ggccctcgct cgaggaactc aacgcgaagc tgggcgtcat cttcacggat
      241 ctgagaggcg ccgtgacgat gctctcggga gaacaggaca aggcctccgg gaggctcacc
      301 tccattgcgc ggcagatcgg gggcgcacgc cgggagtggg atgcgaccgg ccccgtcgcc
      361 gcagtcgagg cggccaccct ggcggactac ctgcggcccg acgcggttcc cgcccaggag
      421 gtcatcacga ccacgcggtt cttccgcaac cggaggcagc tgaaggcgct gctggaccag
      481 ctgaagggac gcggcgcggc ttcgcccccg cacgtgctgg tcgcagggac cagtcgcggc
      541 tgtgaagcct attcgctggc catcgaagcc gagctggcgg ggctggacct gagcatcacg
      601 gccatcgaca tcgacgcgga gaacatcgcc gcggcctcag cgggcatcta taccacggcg
      661 gacttcacgg atttcgacgg caccaacctc cttccgaagg aggccaccgg gtacttcctc
      721 cggaacgggg acctgatcca ggtcgatccc ggaacgttgc ggaacccgcc ctacttcaag
      781 gtcgacgacc tgttccggca cgaaggcctg tacgacgccg tgatctgcaa caacgtgctg
      841 atccacttct cggatgccgc ggccggacag gccctggccc ggctggacct cctggtgtcg
      901 gacggcggca tcctggcggt gggaggcgcg cccctggatg tcctcgcggg ctacctgggg
      961 gccagacgga ccttcaggcc catcgagacc gccatggagg ccatctggga ggactggaaa
     1021 ggggaccgcc aatcctgggc gctggacccc ggcagctatg tgggcatgcc gcccatcgat
     1081 cagaccctgc ccgattggaa ggtccgcttc tgcactctgt tccgcaagga ggggttgggc
     1141 ttcgggggat ccgggcagga cccgaaggag ctgggccggt ggctcggcgg ggtcgaaggg
     1201 gccctccagg gggtggccca ggggcaggcg acgatctcga gcagcgcccg caccatcgtc
     1261 gaatacctgg atgacctgtt gaagtgacgg accctagtcc gcctgcgccg cgaggcgctc
     1321 ctgggcgggc tggaagccgg gggccagttt gagggcggtg cggtaccact tgccggcctc
     1381 ctcctggttc cccttctgac gcagggcctc gccgaggccg aaggccgcct cgtggctggt
     1441 gggcttctcc atgtaggcgc tgatgaagga cttgagggcg gtgtctccgg atgagatgcc
     1501 gaggatgagg tagccccgga tgaggtccgc ttcgccggcc ggaaggaggt gcggaagcca
     1561 gggttccttc acgtcccccc ggatccggcc gtactcggcg agggcggaga acccttcgga
     1621 aaaccggccc tccttcaggc aggtccgggc ctcgagcagg gccaggttcg ctgctgcggg
     1681 cgcgaagggc gccatccagc ggtgggccga ggcgaagtgg ttttcggcct ccgggtggtt
     1741 cccccaggcg aaggtgatca ggccgagcag gttcaacccc tcggccgtgg ggcccttggc
     1801 gagggaatcc atcaggagtt ccagggcctt ggcgtggttg ccggcctggt gctgggccag
     1861 ggcgagccgg aaggcgatgt cggcggtcgg gaacagggcg aggtgctgtt ccagggcggg
     1921 gatggcctcc ggccaggccc gcgcgtccat ggccgcctgc cagcgcccgc gggcctccgc
     1981 cagggaagcc aggtcgaggt cggccaacct ccggcaggcc tcccagacca tgtccggctc
     2041 cacctgctcc aggcagcagt agggggtctg ctgattcggg cagtagtccc ccatgaactg
     2101 gttggtcgcc tggcagcctg ggtgcagcag gtcctggtgg atcgcgtcct ggaggccctg
     2161 ctgttcgggc ccgtccttga ggaagaggtg gtagcagccg gccttcggac agtcacccac
     2221 caggcccagg gcccgccagc cgaactggcc gtgacggaac ggaagccggc accgggccgg
     2281 gacggtggag tagatcccca cgatgccgat gtcggtcagg cccgccacct gcacggggcc
     2341 gctgtcgggg ctgacgaagg catcgcaggc ctggcacagg gccacgaggt cgggcaggga
     2401 gaggcggttg gtcaggtcca ccatctgggg ccggggtgcc agtttgagga tgcccttgaa
     2461 ggggacggcc gaatcatcgc ccgtcagcac cggcgtatcg ccgctctgga tgatccggtc
     2521 ggcgagggcg ttccagtggg cggcggacca tttgcggttc cggtccccat tggccgggtg
     2581 gaggatgatg cggcggcctg gacggccggc cagggccgcc tggaccttgg cctgggattg
     2641 ggccatgacc ttgccgggcc aggccaccac cgcggatttg tgctcgggga aggcgtggag
     2701 gcccagggcc tccaggaagg catccacctg gtgcagtttg ttgatgccgt atgcgatccc
     2761 attcagccgg tgctggctga cgaagtggtt cttgcgggtg tactcctgga tgacgacatt
     2821 gaattctgtg ctgctcgtga agacccggtc cacatggggc gagtgcttca cgagttcggc
     2881 gtaccggggc tccgtgtgga acaggatgat cgaatggggc tcatgggccc tcagggcggc
     2941 caccgcgctc agcgccatga tcacatcacc gagtccaccc agtcgttcga tggcgtagac
     3001 cgtctggtcg cgggcctccg gggcggcggg aacccgggag gctgagggtg ggggaagggc
     3061 catgaggacc tctaaaaacc tgtggttgga gcgaagggtg agccatggag gggagtggcg
     3121 gggaggtcaa ccttcggaag cccggccctc gacacgttcc ttaacaagat ccacgccaag
     3181 ccgcttggcg gtggcgtaga gggcg
//
LOCUS       DASUDT010000213         2513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1556690, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000213 DASUDT010000000
VERSION     DASUDT010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556690"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..2119)
                     /locus_tag="VFV26_04455"
     CDS             complement(128..2119)
                     /locus_tag="VFV26_04455"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4845447.1"
                     /translation="MLASLNHVDLRFGPQEVLKDVTWAIQEGECWGVIGRNGAGKSTV
                     FKLLLGQLDADSGTVVRPTKERGIRMGHYAQDLVPDTQGSVLEEALAAFGDVEKLQHE
                     MRELEHRMGEAGADLDLVMERYQKVTEAFEHLDGFTIRARAESILQSLGFSAADFERP
                     VETLSGGQKSRVMLAKAILQGQDLLLLDEPTNHLDLPSLRWLESFIQDTDATVAVISH
                     DRYFLDKIATEILELELGRSRAYDGNYSEFMEKKEQELELLERHYEQQQAYIKNQEEY
                     IRRNIAGQNTKQARGRRTHLSKLDRIQKPLKDRRKVKFTFPETQRSGDVALVLENASV
                     GWGGKALYAPLEQLQIKRGQKRGIVGLNGTGKSTLLKAISDEIPFITGQARLGSQVKL
                     GYFDQHHRNLDPRNTVFQQIHGVTPQAMKQDVLGFLAKFQFRGDEVDKPVTALSGGER
                     ARLSIATLIRQGVNLLLLDEPTNHMDIPSMEAMEDTILSFTGAAIVVTHDRYLLGRVA
                     DSLLRIHEGRAEFREGGYEDHQAWVDLDLGSEDEVDTPNPNPPQKNASPQAKPSSVAK
                     PQSPATTPIKPAKPAPIDKDKQRAVKRFEKQVAEAEAKVADLEAKLADMQKEMAAMDP
                     TDWQAFNAKLDAQKGLEADLAYAMSDWEAAQGALEDAQR"
     gene            complement(2174..2249)
                     /locus_tag="VFV26_04460"
     tRNA            complement(2174..2249)
                     /locus_tag="VFV26_04460"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2214..2216),aa:Ala,seq:ggc)
     gene            complement(2301..>2513)
                     /locus_tag="VFV26_04465"
     CDS             complement(2301..>2513)
                     /locus_tag="VFV26_04465"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEX4845448.1"
                     /translation="RPGDAVRLPGAAGPSKTAGIAIPQRHVVRRGETLAAIGRKYGVA
                     PGDLKAWNGLKGDRIQAGQRLRLTPR"
BASE COUNT          347 a          841 c          844 g          481 t
ORIGIN      
        1 ccccggcgga cggcgtccag ggccatgagc cggcccaggc cgctggctgc accggtgatg
       61 aggacgtggg cgccgcggaa atcggtcatg gtggcctcgg gatgattccc cgatcctacc
      121 caggacctca gcgctgcgca tcctccagag cgccctgggc cgcctcccag tcgctcatgg
      181 cataggccag atcggcctcc aggcccttct gcgcatccag cttcgcattg aaggcctgcc
      241 agtccgtggg gtccatggcc gccatctcct tctgcatgtc cgccagcttc gcctcgagat
      301 ccgccacctt ggcctcggct tcggccacct gcttctcgaa gcgcttcacg gcccgctgct
      361 tgtccttgtc gatgggggcg ggcttggcgg gcttgatggg cgtggtggcg gggctctgcg
      421 gcttcgccac agagctgggc ttcgcctgcg gcgaagcatt tttctggggt ggattcggat
      481 tcggggtgtc gacttcatcc tcgctgccca gatccaggtc cacccaggcc tggtggtcct
      541 cgtagccgcc ttcgcggaac tcggccctgc cctcgtggat gcgcagcagg gagtccgcca
      601 cgcggcccag caggtagcgg tcgtgggtca ccacgatggc ggcgcccgtg aagctgagga
      661 tcgtgtcctc catggcctcc atgctgggga tgtccatgtg gttggtgggc tcatccagca
      721 gcagcaggtt cacgccctgg cggatgaggg tggcgatgct gaggcgggcc cgctcgccgc
      781 cggaaagggc cgtcacgggc ttgtccacct cgtcgccgcg gaactggaac ttggccagga
      841 agcccagcac gtcctgcttc atggcctggg gggtcacgcc gtggatctgc tggaacacgg
      901 tgttccgcgg atccaggttc cggtggtgct ggtcgaagta gcccagcttc acctggctgc
      961 ccaggcgggc ctggccggtg atgaagggga tctcgtccga gatggccttc agcagggtgg
     1021 acttgccggt gccgttcagc cccacgatgc ccctcttctg gccgcgcttg atctggagct
     1081 gctccagggg cgcgtagagg gccttcccgc cccagcccac gctggcgttc tccagcacta
     1141 gggccacgtc gccgctgcgc tgggtttccg ggaaggtgaa cttcaccttg cgccggtcct
     1201 tcaggggctt ctggatgcgg tcgagcttgg agaggtgcgt gcggcggccc cgggcctgct
     1261 tggtgttctg gcccgcgatg ttgcggcgga tgtactcttc ctggttcttg atgtaggcct
     1321 gctgctgctc gtagtggcgc tccagcagct ccagctcctg ttccttcttc tccatgaact
     1381 cggagtagtt gccgtcgtag gcccgggaac gccccagttc cagctccagg atctcggtgg
     1441 cgatcttgtc caggaagtag cggtcgtggc tgatgacggc cacggtggca tccgtatcct
     1501 ggatgaagga ctccagccag cgcaggctgg gcaggtccag gtggttggtg ggctcgtcca
     1561 gcagcagcag atcctgaccc tggaggatgg ccttggccag catcacgcgg ctcttctggc
     1621 cgccggacag ggtctccaca gggcgctcga aatccgcggc gctgaagccg agggactgga
     1681 ggatgctctc ggcgcgggcg cggatggtga agccgtccag gtgctcgaaa gcctccgtga
     1741 ccttctggta gcgctccatc accagatcca ggtcggcgcc ggcctcgccc atgcggtgct
     1801 ccagctcgcg catctcgtgc tgcagcttct ccacatcgcc gaaggccgcc agggcctcct
     1861 ccagcacgct gccctgagtg tccggaacca ggtcctgggc gtagtggccc atgcggatgc
     1921 cgcgctcctt cgtgggccgc accacggtgc cgctgtcggc atccagctgg cccagcagca
     1981 gcttgaagac cgtgctcttg cccgcgccgt tgcggccgat gacgccccag cactcgccct
     2041 cctggatggc ccaggtgaca tccttcagca cctcctgggg gccgaagcgc agatcgacgt
     2101 ggttgagcga tgcgagcatg tccggagacc ttcagcttga agcaagaagg ccacctttcg
     2161 gtggccttct gtttggtgga gccaatcggg atcgaaccga cgacctcttg catgccatgc
     2221 aagcgctctc ccagctgagc tatggcccca atggggaaaa cccagtatca caccccttct
     2281 ccgcttctgc aagcacagat ctagcggggc gtgagccgca gccgctggcc ggcctggatg
     2341 cggtcgccct tgaggccatt ccaggccttg agatcgccgg gcgccacgcc gtacttccgg
     2401 ccgatggcgg ccagggtctc gccccgccgg accacatggc gctggggaat cgcgatgccg
     2461 gcagttttcg atgggcccgc ggcgcccggc aggcgcacgg catccccggg acg
//
LOCUS       DASUDT010000214         2530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_429904, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000214 DASUDT010000000
VERSION     DASUDT010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429904"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VFV26_04470"
     CDS             <1..529
                     /locus_tag="VFV26_04470"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF004019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX4845449.1"
                     /translation="SAHFAATIQWIRTLSPHCGIEVLIPDFRGSEAALLAVLEARPEV
                     LNHNVETVPHLYKRVRPDADYAQSLEVLRRTAQWRDLHAPAMRMKSGIMVGLGETPEQ
                     VLELMADWRKNRVDIATLGQYLPPSELHLPLHRYVEPAEFDMYRRKGLEMGFQRVESA
                     PLVRSSYHAGESFEA"
     gene            complement(803..2320)
                     /locus_tag="VFV26_04475"
     CDS             complement(803..2320)
                     /locus_tag="VFV26_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845450.1"
                     /translation="MPESTQRLWRRALALGLPLLLLLGAGGGLAWLLAARAARGPLRV
                     LLITQPPEGAGRLDAATCRAIGALVQDQLEAFGGVAITSVTAMPASLESLRGRSRTLV
                     VQLDPSREGEALALSYRHVWSHQLSRGAPPDWVRHEAGSLMPVEAFGAFLRGFPRAIR
                     VDNPALLTPGQPARFWDLIQASAWRLKNERLEEAMALAEAAAAAEPACASGWFLVGNL
                     RYRRMLNNPAAFRREQSDTESVLQRGLSLAPGHPRGVFLLSLLKTDSGAQAEALDLLL
                     RAREGQPHNPTLLTGIAYAARGAGLLALSRRAMDLRDELAFAGLQPQAVDITCLYTGE
                     LERFEASLQEQPGHLRSTSGVLPFYRGYLALVRGDQTQARQEFRTAATRTHGYPNILR
                     LSEIYDLVLAGEKEAAWKKLREYDQERIGMREPDGEFTLRLAEAYALMGDRASAMDMA
                     SRAFARGFGCTAWYERSPMLEPLRGLPKWKALVQHLRERQQLMEDRFPVEMLGAD"
BASE COUNT          388 a          899 c          869 g          374 t
ORIGIN      
        1 ctcggcccat ttcgccgcca ccatccagtg gatccgcacc ctgtcgcccc actgcggcat
       61 cgaggtcctc atcccggatt tccgcggcag cgaggcggcc ctgctcgcgg tgctggaggc
      121 ccgcccggag gtgctgaacc acaacgtcga gacggtgccc cacctctaca agcgggtgcg
      181 gccggatgcg gactatgccc agagcctcga ggtcctgcgc cgcacggccc agtggcggga
      241 tctccacgcc cccgccatgc gcatgaagag cggcatcatg gtgggcctgg gcgagacccc
      301 cgagcaggtg ctggagctga tggcggactg gcggaaaaac cgcgtggaca tcgccaccct
      361 cggccagtat ctcccgccct cggagctgca cctgcctctg caccgctacg tggagcccgc
      421 cgagttcgac atgtaccggc ggaagggcct ggagatgggc ttccagcggg tggaatccgc
      481 gccgctggtg cgctccagct accacgccgg agagagcttc gaggcctgaa ccccgaggct
      541 ctctccggcg gcgctccagg gctcaggccc attcgcgttc aatcgtaaaa gaatccacca
      601 cggagtcaca gagcatgggc acacggcagg cggcgggcca ggatgcccca aaaggatccg
      661 ggcccgccgc ctgccgtggc ttccggcttg gccggaagcg gccttcggcc tgcccatgac
      721 ggaggatcac cgaggcctct gtgcctcctc tgcggccacg gtgtctccgt ggtgaatctc
      781 tatctttgaa cgttgcttgg tatcaatccg cgcccagcat ctccacgggg aagcggtcct
      841 ccatgagctg ctgccgctcc cgcaggtgct gcacgagggc cttccacttg ggcaggcccc
      901 gcaggggctc cagcatgggg ctgcgctcgt accacgccgt gcacccgaaa ccccgtgcga
      961 aggcgcgact ggccatgtcc atggcgctgg cccggtcccc catcagggca taggcctccg
     1021 ccagccgcag ggtgaactcg ccatcgggct cacgcatgcc gatgcgctcc tggtcatact
     1081 cccgcagctt cttccaggcc gcctcctttt cgccggccag gaccagatcg tagatttcgc
     1141 tcagccggag gatgttcgga tagccatggg tccgggtagc ggcggtcctg aactcctggc
     1201 gggcctgggt ctgatctccc cgcaccagcg ccaggtagcc ccggtagaac ggcagcacgc
     1261 cggaggtgct gcgcagatgt cccggctgct cctggaggct ggcttcgaat cgctccagct
     1321 cgccggtgta gaggcaggtg atgtccacgg cctggggctg gagcccggcg aaagccagct
     1381 catcccggag gtccatggcc cgccgggaga gcgccagcag gcccgcgccc cgcgccgcgt
     1441 aggcgatgcc cgtcagcagg gtcggattgt ggggctggcc ctcccgcgcc cgcaacagca
     1501 ggtccagggc ttcggcctgg gcgccgctgt cggtcttgag cagggacagc aggaagaccc
     1561 cccggggatg gccgggcgcc aggctcaggc cgcgctggag cacggattcc gtatcggact
     1621 gttcccggcg gaaggccgcg ggattgttga gcatgcggcg gtaccgcagg tttcccacga
     1681 ggaaccatcc gctggcacag gccggctctg ccgccgccgc ggcctccgcg agggccatgg
     1741 cctcttccag ccgctcattc ttcaggcgcc aggcgctggc ctggatcagg tcccagaagc
     1801 gggcgggttg cccgggggtc agcagcgcgg ggttgtccac ccggatggcc cgcgggaagc
     1861 cccggaggaa ggctccgaag gcctccaccg gcatcaagga cccggcttcg tgccgcaccc
     1921 agtccggcgg cgctcccctg gacagttgat ggctccacac atggcggtag gaaagcgcga
     1981 gggcctcccc ttcccgggac ggatccagct gcaccaccag ggtgcgggac cggccccgca
     2041 ggctttcgag actcgcgggc atcgccgtga cgctggtgat ggccacaccc ccgaaggcct
     2101 ccagctggtc ctggaccagg gccccaatgg cccggcaggt ggccgcatcc agccggccgg
     2161 cgccctcggg cggttgcgtg atcagcagca cccggagggg tccgcgggcc gcccgggcgg
     2221 ccagcagcca ggccaagccc ccgccggccc ccaggaggag cagcaggggc agacccaaag
     2281 ccagggcccg gcgccatagt cgttgggtgg attcaggcat gggaagttca agtgttacgg
     2341 gatttccgcc catccgctac agcccgaacc attccgggcg gaagtgggcg gtgaggaggg
     2401 cctcccgttc ctccaggtgc tgaagcagcg agttccagcg cggcgtgccc cggattggcc
     2461 cgagaaaagg gctttcccgg tacccgcggg cgcagccgaa tccctggctg aaggcacggc
     2521 cggcctgcgc
//
LOCUS       DASUDT010000215         2067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1600706, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000215 DASUDT010000000
VERSION     DASUDT010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600706"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..781)
                     /locus_tag="VFV26_04480"
     CDS             complement(<1..781)
                     /locus_tag="VFV26_04480"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEX4845451.1"
                     /translation="MQGIGRWMLRAVLGFVALLLLLSLASYHPLDPHPFTEGATGAGV
                     QNLCGLAGSTLAGLLQTLMGTGAWILPPYLLWEAWPKEGRRWPGRLAWLGLALAVWTA
                     LGAFGSRTWTSLDASSAVQLRWGGWLGSALWPTQRRFLGPVGLPLLLALVMLVCALVL
                     APALTRALGRLLHRWLGEKAWPWVKPMPAKGFQGFISMVKRPFLRGRNPDQPELDAAD
                     GAALQALAQRHQALEAQREALLKAELETADARRKQPQIRAED"
     gene            complement(830..>2067)
                     /locus_tag="VFV26_04485"
     CDS             complement(830..>2067)
                     /locus_tag="VFV26_04485"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX4845452.1"
                     /translation="EGEVAEPTELVLEGGSIRETRYAEPGPVRWEFFRPPQGESAVLR
                     TAAGQVLARFEFTLPSRKPAGPAPKAPVPPVAKTPALPKGAQAPAPPSQPRTRTGSRP
                     QEAPVVALASRPRPSIAAVPRPVPAPEAGVPESPAPVAALRSPTSLRPVDPSAAPWPG
                     MGEALNLTRGPGGHKRLLLSFDGGSNAEVAAEVLDTLKAREVRTTLFLTGAFIQRFPA
                     LVKRMAAEGHELGNHTMNHPHFAPGMKRDPKWTRERVQRELLEADAALMNLLGRPMDP
                     FWRAPYGEHTAEIRRWAEEVGYRHVGWSEGADTLDWATPKERRLYRSGDAILRRLQSR
                     LDRDGDGLIVLMHLGSERAEGDRPSTGLGPFMDRARKAGWTFVAASAYLQDLGKPVWD
                     PQQRRALLQPPSGSAPLAR"
BASE COUNT          279 a          692 c          827 g          269 t
ORIGIN      
        1 ggtcctcggc ccggatctgg ggctgcttcc ggcgggcatc ggccgtttcc agctcggcct
       61 tcagcagggc ctcccgctgg gcctcgaggg cctggtggcg ctgggccagc gcctggaggg
      121 cggcgccgtc cgccgcatcc agttcgggct ggtcggggtt gcggccccgg aggaagggcc
      181 gcttcaccat ggagatgaag ccctggaatc ccttggcggg catgggcttc acccagggcc
      241 aggccttttc gcccagccag cggtggagca gcctccccag ggcccgggtc agggcgggtg
      301 ccagcaccag ggcgcagacg agcatgacca gggccagcag gagcggcaaa ccgaccgggc
      361 cgaggaagcg gcgctgggtg ggccagaggg cgctgcccag ccagccgccc cagcggagct
      421 ggacggcgct gctggcatcg aggcttgtcc aggtccggct gccgaaggcg ccgagggcgg
      481 tccacacggc gagggccaga cccagccagg ccaggcggcc gggccagcgg cggccttcct
      541 tgggccaggc ctcccagagc aggtagggcg gcaggatcca ggcgcccgtc cccatgaggg
      601 tctgcagcag gcctgccagg gtggagcccg cgaggccgca caggttctgc acgccggccc
      661 cggtggcgcc ctcggtgaag gggtggggat ccagggggtg gtagctggcc agggagagca
      721 gcagcagcag ggccacaaag cccagcaccg ccctcagcat ccaacggccg attccctgca
      781 atgcgcctcc acggtgtcct gcgaccagtg tagcccagcg cgacgcgcgc tagcgggcca
      841 ggggcgcgga tcccgaaggc ggctggagga gggcgcgccg ctgctgcgga tcccagacgg
      901 gcttgcccag atcctgcagg taggcgctcg cggcgacgaa ggtccagccg gctttccgcg
      961 cccggtccat gaaggggccg aggccggtgg aggggcgatc gccctcggcg cgttccgaac
     1021 ccaggtgcat gagcacgatg aggccgtccc cgtcgcgatc caggcgcgac tggagccgcc
     1081 ggaggatggc atcgccgctg cgatagaggc ggcgctcctt gggcgtggcc cagtcgaggg
     1141 tgtcggcgcc ttcgctccag cccacgtggc ggtagcccac ttcctccgcc cagcgccgga
     1201 tctccgccgt gtgttcgccg tagggcgccc gccagaaggg atccatgggg cgtcccagca
     1261 ggttcatgag cgcggcatcg gcctccagca gctcccgctg gacccgttcg cgggtccatt
     1321 tgggatcgcg cttcatgccg ggggcgaagt gggggtggtt catggtgtgg ttgcccagct
     1381 cgtgcccctc ggcggccatg cgcttcacca gggccgggaa gcgctggatg aaggcgccgg
     1441 tgaggaagag cgtggtgcgc acctcccggg ccttcagggt gtcgagcacc tcggcggcca
     1501 cttcggcatt ggagccgccg tcgaagctga gcagcaggcg cttgtgcccg ccggggcccc
     1561 gggtgaggtt cagggcctcg cccatgccgg gccacggggc agcggaggga tccacaggcc
     1621 gcaaggacgt gggggaccgg agggccgcca cgggcgcggg tgattccgga accccggctt
     1681 cgggcgcggg cacaggtctg ggcacggcgg cgatggatgg ccgtggacgc gaagccaggg
     1741 ccaccacggg ggcctcctgc gggcgggatc cggtccgggt gcggggctgg gaaggcgggg
     1801 ccggcgcctg ggcgcccttg gggagggccg gtgtcttggc caccggcggg acgggcgcct
     1861 tgggcgcggg gccggcgggt ttgcgggacg gaagcgtgaa ctcgaagcgg gccaggacct
     1921 gtccagccgc ggtgcgcaga acggcggact cgccctgggg ggggcggaag aattcccagc
     1981 gcacggggcc gggttcggcg taccgcgttt cccggatgga gccgccttcc agcaccagct
     2041 ccgtgggctc ggcgacttcg ccttcca
//
LOCUS       DASUDT010000216         2734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_253148, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000216 DASUDT010000000
VERSION     DASUDT010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253148"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..933)
                     /gene="aroF"
                     /locus_tag="VFV26_04490"
     CDS             complement(<1..933)
                     /gene="aroF"
                     /locus_tag="VFV26_04490"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006421.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX4845453.1"
                     /translation="MLILMHPSATREQVGEVLALLESAGVRSQVNETPEALSIVAPNA
                     SRALKPDRIEPMAGVRRVVPITSPYKLASADAAAGRTVVDVRGVKIGGPELALVGGPC
                     GVESREQLFTVARYVAEAGVKLLRAGAFKPRTSPYAFQGLGLEGLRLLEEARAEFGLG
                     IVTEATEVETFDDVERSADMVQIGARNMQNFALLRRAGRCGKPVLLKRGPAATLEEWL
                     YAAEYVLGEGNRNVVLCERGIRTWSDHARNTLDVSVVPAAKALTHLPVMVDPSHATGR
                     RDLVIPCGLAGVAAGADGLLVETHCNPEKALSDGP"
     gene            1028..1738
                     /locus_tag="VFV26_04495"
     CDS             1028..1738
                     /locus_tag="VFV26_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845454.1"
                     /translation="MRRALPAFLAPLLLVFGCTRPEVEAFRQRPRPVVVAVSLPAQLA
                     DREGFQQEYASALRARLATRVVVVPGGVKPPVDAVELQVDIRDISQPSGQPGAAAVGV
                     ATGVTVGVLSAASGNRGWGVVDGLFWGLWAGSHAAMHQERTRDRLGYRPQVVRAQVRL
                     MQPGNPEPLWVESIEPIEVVEAMDPLPPGLRDDDGRIREEEAKGFARVVVQKLAAYFQ
                     WSRSSEQRFYEEPAPKKD"
     gene            complement(1739..2473)
                     /gene="tpiA"
                     /locus_tag="VFV26_04500"
     CDS             complement(1739..2473)
                     /gene="tpiA"
                     /locus_tag="VFV26_04500"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX4845455.1"
                     /translation="MRFVVANWKMNFLSDQARDFCEAFLADYAASPSVTTAIAPPFHL
                     IRPVADSFRSRQVRVFGQNGHAEPKGAYTGEISMAQLQDAGCSGVILGHSERRQLFGE
                     TDEALVAKVNAARAWNLLPLLCVGETLEERQQGRTLEVLDRQLSILARTGPTPLWVAY
                     EPVWAIGTGLRAEVAQIREAHAFVQAKVRTLMDPSIGPVPVLYGGSVTPENFPELLDI
                     PEVAGGLVGGASLDPAKFATLVKQAG"
     gene            complement(2482..>2734)
                     /gene="pgk"
                     /locus_tag="VFV26_04505"
     CDS             complement(2482..>2734)
                     /gene="pgk"
                     /locus_tag="VFV26_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX4845456.1"
                     /translation="LLWNGPMGVFEMAPYATGTLTMAEELAEAADRGAFVLVGGGDSV
                     AAVNKAGVAPRMSHVSTGGGASLEFLSGLDLPGVAALSK"
BASE COUNT          385 a          940 c         1000 g          409 t
ORIGIN      
        1 ggggccatcg ctcagggcct tctcggggtt gcagtgggtc tccaccagca ggccgtcggc
       61 gcccgcagcc acgccggcca ggccacaggg gatcaccagg tcccggcgcc ccgtggcgtg
      121 gctgggatcc accatcacgg gcaggtgcgt gagggccttg gccgcgggca ccacgctgac
      181 atccagggtg ttgcgggcat gatcggacca ggttcggatg ccccgttcgc aaaggaccac
      241 attccggttg ccctcgccca gcacgtattc cgcggcgtag agccattcct ccagggtggc
      301 ggccggaccc cgcttgagca gcacgggttt tccgcagcgt ccggcccggc gcagcaaggc
      361 gaaattctgc atgttccggg cgccgatctg caccatgtcg gcgctgcgct ccacgtcgtc
      421 gaaggtctcg acctccgtgg cctcggtgac gatgcccagg ccgaattcgg cgcgggcctc
      481 ctccagcagg cgcaggccct ccagccccag gccctggaag gcataggggc tggtgcgggg
      541 cttgaaggcg cccgcccgca gcagcttcac gccggcttcg gccacgtagc gcgccacggt
      601 gaagagctgc tcgcggctct ccacgccgca ggggccgcca acgagcgcca gttccggccc
      661 gccgatcttc acgccgcgca cgtccaccac cgtgcgtccc gcggcggcat cggcgctggc
      721 gagcttgtag gggctggtga tggggacgac gcggcgcacc cccgccatgg gctcgatgcg
      781 gtcgggcttg agtgccctgg aggcattggg cgccacgatg ctgagggcct ccggcgtctc
      841 gttcacctgg ctgcggacgc ctgcggactc cagcagggcc aggacctccc cgacctgttc
      901 ccgggtcgcg gaagggtgca taaggatgag catggggcct cgcagcgaag actcattcta
      961 gcccccggcc cccggcctgt ctggacaggg ggccctgcgg cacccagact tgggcccgga
     1021 ggttcccatg cggcgtgcgc tccctgcatt cctcgccccc ctgctgctgg tcttcggctg
     1081 cacgcgcccc gaggtggaag ccttccggca gcggcccagg cccgtggtgg tggccgtgag
     1141 cctgcctgcg cagttggcgg accgcgaagg cttccagcag gagtacgcct cggccctgcg
     1201 ggcccggctg gccacccgcg tggtggtcgt gcccggaggg gtgaagccgc cggtggacgc
     1261 cgtggaactg caggtggaca tccgggacat cagccagccc tcgggccagc ccggcgccgc
     1321 ggcggtgggg gtcgccacgg gcgtcaccgt gggcgtcctc agcgcggcat cggggaaccg
     1381 gggctggggc gtggtggatg gcctcttctg ggggctgtgg gccggttccc acgcggccat
     1441 gcaccaggag cgcacccggg accgcctcgg ctaccggccc caggtggtgc gggcccaggt
     1501 gcggctgatg cagcccggca acccggagcc cctctgggtc gaatccatcg agcccatcga
     1561 ggtggtggag gccatggatc ctctgccgcc gggcctccgt gacgatgacg gccgcatccg
     1621 cgaggaggag gccaagggct ttgcccgggt ggtggtacaa aaactggcgg cctatttcca
     1681 gtggtcgcgg tcttcggagc agcggttcta cgaggagccc gccccgaaaa aggactgatc
     1741 agcccgcctg cttcaccagg gtggcgaact tggcggggtc caggctggcg ccgcccacga
     1801 ggccgccggc cacttcgggg atgtccagca gctcggggaa gttctcgggg gtgacgctgc
     1861 cgccgtagag gaccggcacc gggccgatgc tggggtccat gagggtgcgg accttggcct
     1921 ggacgaaggc gtgggcttcg cggatctgcg ccacttcggc ccgcaggccc gtgccgatgg
     1981 cccagacggg ctcgtaggcc acccagaggg gtgtgggtcc ggtcctggcc aggatggaga
     2041 gctggcggtc caggacctcc agagtccgcc cctgctgccg ctcttcgagg gtttcaccca
     2101 cgcagagcag gggcagcagg ttccacgctc gggcggcatt caccttggcc accagggcct
     2161 cgtcggtctc cccgaagagc tggcgccgct cgctgtggcc caggatcaca cccgagcaac
     2221 cggcatcctg caactgggcc atggagatct cgccggtgta ggcgcccttg ggctccgcat
     2281 ggccgttctg tccgaacacc cggacctggc ggctccggaa gctgtcggcc acgggccgga
     2341 tgaggtggaa gggaggggcg atggcggtgg tcaccgaggg ggaggcggcg taatccgcga
     2401 ggaaggcctc gcagaaatcg cgagcctggt cggacaggaa attcatcttc cagttggcga
     2461 ctacgaagcg catgggcccc cctactttga aagggcggcc acgcccggca ggtctaggcc
     2521 gctgaggaac tccaggctgg ctccaccgcc ggtggagacg tgcgacatgc ggggggctac
     2581 cccggccttg ttcacggcgg ccacgctgtc gccaccgccc accagcacga aggcgccgcg
     2641 atccgccgcc tcggccagct cctcagccat ggtgagggtg ccggtggcgt agggggccat
     2701 ttcgaagacg cccatggggc cgttccagag cagg
//
LOCUS       DASUDT010000217         3693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_695016, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000217 DASUDT010000000
VERSION     DASUDT010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3693
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695016"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VFV26_04510"
     CDS             <1..372
                     /locus_tag="VFV26_04510"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HEX4845457.1"
                     /translation="VVKLIDVYPELDEADPKMSGYQLMVSGEVFRARYRRSFERPEAV
                     VPNQPTPYRIGLHGQAYRFKRGHRIMVQVQSSWFPIIDRNPQTFVPNIFWARPEDYRK
                     AVQRIYHAPGQASFVELPVVK"
     gene            complement(623..1327)
                     /gene="cobB"
                     /locus_tag="VFV26_04515"
     CDS             complement(623..1327)
                     /gene="cobB"
                     /locus_tag="VFV26_04515"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD+-dependent deacetylase"
                     /protein_id="HEX4845458.1"
                     /translation="MTLPRDASMVILTGAGISAESGLRTFRDGNGLWENHRVEDVATP
                     EAFHRNPALVYRFYNERRRSLPAVQPNAAHRALARLEREWPGEVLLVTQNVDDLHDRA
                     GSRSLLHMHGELLKGRCLACRTVLDWPGDLDADSRCPACRRGPVRPHIVWFGEVPLEM
                     DRIYRALERCALFVAIGTSGHVYPAAGFVEAAAPGARTVELNLEPSLVADAFQEHRSG
                     RATDLVPAFVAELLGE"
     gene            complement(1493..3160)
                     /locus_tag="VFV26_04520"
     CDS             complement(1493..3160)
                     /locus_tag="VFV26_04520"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX4845459.1"
                     /translation="MRRLPILAATPILAATLILALPAAAQAARPRLVVAISVDQLSAE
                     LMQTYGPELRGGLARLMREGAYFTEAYHDHAFTETGPGHSVLLSGRFPAHTGIVENRW
                     LDRATGRLVYCVEDPAARALHAPGQASASQAQFLGDTLGDWLQAQVPGSRAFAVSGKD
                     RAAVLMAGRKPTAAYWFAGAAGFTSSSIYADRLPAWLMRFDAELKERFATRSWLWAKE
                     PTTPEGRVASWTFPGQVIRNGALPRLIHGAGMPLDKTFEARFRRSPFLDDVTLEAAEA
                     LMEAEQLGRGPAPDLLSVSFSATDYIGHAYGTLGTEMRDQIHRLDRTLGRLLDAIRRR
                     DPGAWVVLSADHGGMDLPEALAENGFPARRVVAGPFFQELRAHLKTALKVEADLVLES
                     PEPTTIYLRDAALRAARLDRRTVQAAILAWLKARSDVAGAFTAEELAATDPAATGSPR
                     DSSLRVLLRRSFHAERSGDILVAFQPWMGFGTPPTDYPAGHGSPYDYDRRVPLIFWGP
                     WKAGLRPEPVRTVDLAPTLARELDLKPGPVDGKALDLVEKISTKDTK"
     gene            complement(3160..>3693)
                     /locus_tag="VFV26_04525"
     CDS             complement(3160..>3693)
                     /locus_tag="VFV26_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845460.1"
                     /translation="LISGTGDLAAGDFDTGRGFIASVNRRILQVGPLLKLEGGVEYSQ
                     FRAHGSLATGATTQDTRLKQQGVGVGLNAQVWVPFVGIGGEIGLIQRFQHYTLDTAGA
                     SGTQNLSRTWVRVGARWRIPSVIVHPYVAASYQQPVTKDRPVKLGSASDLAAYFAAQG
                     SGQEFERMWTFGVGVTF"
BASE COUNT          531 a         1206 c         1423 g          533 t
ORIGIN      
        1 gtggtgaagc tcatcgacgt gtacccggag ctcgacgagg ccgatccgaa gatgagcggc
       61 tatcagctca tggtctcggg cgaggtgttc cgcgcgcgct accgccgctc gttcgagcgg
      121 ccggaggccg tggtcccgaa ccagccgacg ccgtaccgga tcgggctgca cggccaggcg
      181 taccggttca agcgcgggca ccggatcatg gtgcaggtgc agagcagctg gttcccgatc
      241 atcgaccgca acccgcagac gttcgtgccc aacatcttct gggccaggcc cgaggactac
      301 cgcaaggccg tccagcgcat ctaccacgcg cccggacagg ccagcttcgt ggagctgccg
      361 gtggtgaagt gatgcggttt cgcgttcaac cgtaaaattg tcaccacgga gacacggagc
      421 atgggcacac aggaggcgcc aggctcggat gcccccaaaa ggatccggac ctggcgcctc
      481 ctgtggcttc cggcttcgcc ggaagcggcc ttcggcctgc ccatggcgga gggccacgga
      541 agcctccgtg ccacccccgt gggttccgtg tctccgtggt ggatccctgt ccttgaacgc
      601 aacgtggcgt tatgggcggc cactactcgc ccagcagctc cgccacgaag gccggcacca
      661 ggtccgtggc ccgcccgctg cggtgttcct ggaaggcgtc ggccacgagg ctgggttcca
      721 ggttgagttc cacggtgcgg gcgccggggg cggcggcctc cacgaagccc gcggcggggt
      781 acacgtggcc gctggtgccg atggccacga agagggcgca gcgctccagg gcccggtaga
      841 tgcggtccat ctccaggggc acctccccga accagacgat gtggggccgc accgggccgc
      901 ggcggcaggc ggggcagcgg ctgtcggcgt ccaggtcgcc gggccagtcc agcacggtcc
      961 ggcaggcgag gcagcggccc ttcagcagct cgccgtgcat gtgcaacagg ctgcgcgatc
     1021 cggcccggtc gtggagatcg tccacgttct gcgtgaccag caggacctcg ccgggccact
     1081 cccgctccag ccgcgccagg gcccggtggg cggcattggg ctgcacggcg gggaggctgc
     1141 gccgccgctc gttgtagaag cggtacacca gggccgggtt gcggtggaag gcctcgggcg
     1201 tggccacgtc ctccacccgg tggttctccc agaggccgtt gccatcgcgg aacgtgcgca
     1261 gcccgctttc cgccgagatg cccgcgccgg tgaggatgac catggaggcg tcgcggggga
     1321 gcgtcatggg aataggctcc agaatcatct gaaaagctgg aacacagaga ccgcagaggg
     1381 gcacagagaa cacagaggaa taccacgagg ggcctccggg tgcagcgggc ccatggggct
     1441 tcctctgtgt cctctgcgaa gattctgtgt cctctgtgtt cctgtctttg ctttacttgg
     1501 tgtccttcgt ggaaatcttt tccaccagat ccagcgcctt gccgtccacg gggccgggct
     1561 tgaggtccag ttcccgggcc agggtggggg ccaggtccac ggtgcgcacg ggttcgggcc
     1621 gaaggccggc cttccagggg ccccagaaga tcaggggcac ccgccggtcg tagtcgtagg
     1681 gggagccgtg ccccgcgggg tagtccgtgg ggggcgtgcc gaagcccatc cagggctgga
     1741 aggccaccag gatgtcgccg ctgcgctccg cgtggaagct ccggcgcagc agcacgcgca
     1801 ggctgctgtc ccgggggctg cccgtggcgg cgggatccgt ggcggccagc tcctcggcgg
     1861 tgaaggcacc ggccacgtcg gatcgcgcct tcagccaggc caggatggcg gcctgcacgg
     1921 tccggcggtc cagcctggcg gcccggaggg cggcgtcccg caggtagatg gtggtgggct
     1981 cgggggactc gaggacgagg tcggcctcca ccttgagggc ggtcttcagg tgggcccgca
     2041 gctcctggaa gaagggcccg gccaccacgc ggcgggcggg gaagccgttc tcggccaggg
     2101 cctcggggag gtccatgccg ccgtggtcgg cgctgagcac cacccaggcg ccggggtcgc
     2161 ggcggcggat ggcgtcgagc aggcgcccca gggtgcggtc caggcggtgg atctgatcgc
     2221 gcatctctgt gcccagggtg ccgtaggcgt ggccgatgta gtcggtggcg gagaagctca
     2281 cggacagcag gtccggggcg gggccgcggc ccagctgctc ggcttccatc agggcctcgg
     2341 cggcctccag ggtgacgtcg tcgaggaagg gggaccggcg gaaccgggcc tcgaaggtct
     2401 tgtccagggg catgcccgcg ccgtgaatga ggcggggcag ggccccgttg cggatcacct
     2461 ggcccgggaa ggtccagctg gccacgcggc cttcgggcgt ggtgggctcc ttggcccaga
     2521 gccagctccg ggtggcgaag cgctccttca gctccgcgtc gaagcgcatc agccaggcgg
     2581 gcaggcggtc cgcgtagatg ctggaggagg tgaagcctgc ggcgcccgcg aaccaatagg
     2641 cggcggtggg tttccgtccg gccatgagga cggcggcgcg gtccttcccc gacacggcga
     2701 aggcgcggct gccgggcacc tgggcctgga gccagtcccc gagggtgtcc ccgaggaact
     2761 gggcctggga ggcgctggcc tggccggggg cgtgcagggc ccgggcggcg ggatcctcca
     2821 cgcagtagac gaggcggccc gtggcgcggt cgagccagcg gttctccacg atgcccgtgt
     2881 gggccgggaa gcggccggac agcagcacgg aatggccggg accggtctcc gtgaaggcat
     2941 ggtcgtggta ggcctcggtg aagtaggcgc cttcgcgcat gaggcgggcc aggccgccgc
     3001 ggagctcggg gccgtaggtc tgcatcagct ccgcggagag ctggtccacg gagatggcca
     3061 ccaccagcct ggggcgggcc gcctgggccg cggcgggcag ggccaggatc agggttgcgg
     3121 cgaggatcgg ggtcgcggcg aggatcggga ggcgccgcat cagaaggtca cccccacgcc
     3181 gaaggtccac atgcgctcga attcctggcc gctgccctgg gcggcgaagt aggcggcgag
     3241 gtccgaggcg ctgcccagct tcacgggccg gtccttggtg acgggctgct ggtagctggc
     3301 ggccacgtag ggatggacga tcaccgatgg gatgcgccag cgggcgccca cccgcaccca
     3361 ggtgcggctg aggttctggg tgccggaggc tccggcggta tcgagggtgt agtgctggaa
     3421 gcgctggatg aggccgatct cgcccccgat gcccacgaag gggacccaca cctgggcatt
     3481 caggcccacg cccacgccct gctgcttcag ccgggtgtcc tgggtggtgg cgccggtggc
     3541 gaggctgcca tgggccctga actgcgagta ctccacgccg ccttcgagct tgagcagggg
     3601 gcccacctgg aggatccgcc ggttcacgga ggcgatgaag ccccggcccg tatcgaagtc
     3661 gcccgccgcc agatcgccgg tgcccgagat cag
//
LOCUS       DASUDT010000218         2145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_32757, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000218 DASUDT010000000
VERSION     DASUDT010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32757"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1362
                     /locus_tag="VFV26_04530"
     CDS             <1..1362
                     /locus_tag="VFV26_04530"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX4845461.1"
                     /translation="EEIRKVFGAVAHAVIGLFPLSLGEAPDAIAGTAQADDRRKTGRR
                     AADEKGSSDTIRVSQAKLEQFMNIVAELIISKTMISHLVERLVPQVNGHPAAGVAKEL
                     AHASVYLDHVSKEIQASVLGIRMVPVKTVFTKFPRMLRDLAKASGKKIDLHMTGEDTE
                     IDKSIIEELSDPMIHLIRNSADHGIESPEVRLKAGKPEVGTVTLRARHEGDSVIVEIE
                     DDGKGIDPAVIRAKAVEKGLLSQDRVDAMPDEEVVELIFLPGFSTAAKVTDISGRGVG
                     MDVVRSNVRKLNGRVGVRSTVGKGSIFTIRLPLTLAIIDALLVTSGGQVFALPGTSVE
                     ETLIVPPESLSHLTSRRAIDLRGEVLGVSRLKHLLKSAAPVNAADEADGLSVVVVSAA
                     GRRMGIIVDAFVRRQEVVIKPLAPYLASLPGISGASIMGDGGVVLILDPAELMQLAVQ
                     EAV"
     gene            1359..>2145
                     /locus_tag="VFV26_04535"
     CDS             1359..>2145
                     /locus_tag="VFV26_04535"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX4845462.1"
                     /translation="MSLGAAPTPQSEARVRAGGRETVQHRFMTFFLNDRHYGLPLRHV
                     AEITPLRELNKLPHMPKAVEGILDLRGRVVPVVNLRVRMSLPPLDPSKTGTILVLDLA
                     GTATGLLVDAVDAVLSVPEEDLVPASPLLAGLDGAWVEGFIVQGERVVTLLDAALVAS
                     QGTGRTLGREVLANLSLEERLDDSLRRLIEMAPPKVQGENRVMPQIESSISYTEQEMA
                     KVLDRVEAMLASTDKVFHGLGYLKQEAGLGRLKGREQDIADLER"
BASE COUNT          368 a          720 c          738 g          319 t
ORIGIN      
        1 gaggagatcc gcaaggtctt cggcgccgtg gcccatgcgg tgatcggcct gttccccctc
       61 agcctgggag aggcccccga cgccatcgcc ggcaccgcgc aggcggatga ccggaggaag
      121 accggccggc gtgccgcgga tgaaaagggc tcttctgaca ccatccgcgt gagccaggcc
      181 aagctcgagc agttcatgaa catcgtggcg gagctgatca tcagcaagac catgatcagc
      241 cacctcgtgg agcggctcgt gccgcaggtg aacggccacc ccgccgcggg ggtggccaag
      301 gaactggccc acgcctcggt ctacctcgac cacgtgagca aggagatcca ggcttcggtg
      361 ctgggcatcc gcatggtgcc ggtgaagacg gtcttcacca agttcccgcg catgctccgc
      421 gatctggcca aggccagcgg caagaagatc gacctgcaca tgaccggcga ggatacggag
      481 atcgacaaga gcatcatcga ggagctgagc gacccgatga tccacctcat ccgcaacagc
      541 gcagaccatg gcatcgaatc cccggaagtc cgcctgaagg cgggcaaacc cgaggtgggc
      601 accgtcaccc tgcgggcccg ccatgaaggc gatagcgtca tcgtggagat cgaagacgat
      661 ggcaagggca tcgatcccgc cgtcatccgc gccaaggccg tggaaaaggg cctgctgtcc
      721 caggaccggg tggatgcgat gcccgatgag gaagtggtgg agctcatctt cctgcctggc
      781 ttcagcaccg ccgccaaggt gacggacatc tccggccgcg gcgtgggcat ggacgtcgtg
      841 cggtccaatg tgcgcaagct caacgggcgg gtcggcgtcc gctccaccgt gggcaagggc
      901 tccatcttca ccatccggct gccgctcacc ctggccatca tcgacgcgct gctggtgacg
      961 agcggcggcc aggtcttcgc cctgcccgga acctcggtgg aagaaacgct gatcgtgccg
     1021 ccggaaagcc tgtcccacct gaccagccgc cgggccatcg atctccgcgg cgaggtcctg
     1081 ggcgtgtccc gcctcaagca cctgctgaaa tccgctgctc ccgtgaatgc cgccgacgaa
     1141 gccgacggcc tgtccgtggt ggtggtgtcc gcggccggcc gccgcatggg catcatcgtg
     1201 gatgccttcg tccgccgcca ggaggtggtc atcaagccgc tggcgccgta cctcgccagc
     1261 ctgccgggca tcagcggcgc gtccatcatg ggcgacggcg gcgtggtgct gatcctggat
     1321 ccggccgaat tgatgcagct tgccgtgcag gaggctgtgt gagccttggc gccgcgccca
     1381 cgccccagag cgaggcaagg gtccgcgccg ggggccggga aaccgtccag caccggttca
     1441 tgaccttctt cctgaacgac cggcactacg gcctgccgct ccgccacgtg gcggagatca
     1501 ccccgctccg cgagctgaac aagctgcccc acatgcccaa ggcggtggaa ggcatcctgg
     1561 acctccgcgg ccgggtggtg ccggtggtga acctgcgcgt gcggatgtcc ctgcctcccc
     1621 tcgatccctc caagaccggc accatcctgg tgctggatct ggcaggaacg gccacaggcc
     1681 tgctggtgga tgcggtggac gcggtgctga gcgtgcccga ggaggatctg gttccggcga
     1741 gccccctgct ggcgggcctg gacggcgcct gggtggaagg cttcatcgtc cagggcgagc
     1801 gggtggtgac gctgctcgac gcggccctgg tcgccagcca gggcacgggc cggaccctgg
     1861 gccgggaggt tctggccaac ctcagcctgg aggagcggct ggatgacagc ctgcgccgcc
     1921 tcatcgagat ggcccccccc aaggtgcagg gggagaaccg ggtcatgccc cagatcgagt
     1981 cctccatttc gtacaccgaa caggagatgg ccaaggtgct ggatcgggtg gaggccatgc
     2041 tcgccagcac cgacaaggtc ttccacggcc tcggctacct gaagcaggag gcggggctgg
     2101 gccggctcaa ggggcgagaa caggacatcg ccgacctgga gcgcc
//
LOCUS       DASUDT010000219         3141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2065002, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000219 DASUDT010000000
VERSION     DASUDT010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2065002"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1199
                     /locus_tag="VFV26_04540"
     CDS             <1..1199
                     /locus_tag="VFV26_04540"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEX4845463.1"
                     /translation="ENCPTTLTGKPLRPKDFGTDLRDYLKATPLDQMGQDKPVPEDRP
                     LIGGPVPEGSYWKRDDEVAPWSKAQLEGWISQDTIWACTSCGYCEWACPLQISFVDKI
                     IGMRRYLTLEESNFPAEAQVAFKGMERQGNPWNLPQADRAKWADGLHVPTIAENPEAE
                     YLFWVGCAGSYDAAGQRVSQALVKLLKAANVSFAILGTEESCTCESARRLGNEYLFQT
                     ATEANIETLKGHGVKKVITNCPHCLNTLKNEYPAFGGDFEVVHGTELVAKLISEGKLK
                     MEQTVDVDLTYHDPCYLSRINGQVEAPRAILGAIPGVKLTEMEKHGEATMCCGAGGGR
                     FWLEEHLGKRVNHERFEQAMETKATTIAVGCPFCNVMLNNAAGETNHEGVATTDILEL
                     AARALK"
     gene            1246..1413
                     /locus_tag="VFV26_04545"
     CDS             1246..1413
                     /locus_tag="VFV26_04545"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEX4845464.1"
                     /translation="MPLDPRLLEILCCPACHGDLVELPEALRCQGCGLRYPIEDGIPV
                     MLVDQAKKADR"
     gene            1410..2414
                     /gene="rfaE1"
                     /locus_tag="VFV26_04550"
     CDS             1410..2414
                     /gene="rfaE1"
                     /locus_tag="VFV26_04550"
                     /inference="COORDINATES: protein motif:HMM:TIGR02198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEX4845465.1"
                     /translation="MRLDRAQAESLLHRMAGCKVAVLGDVMLDEYLFGEVNRISPEAP
                     VPIVRVVREQAVLGGAANVAANLKALGAEPLLIGTLQKDAAGDRLLGLLGRLGVSISG
                     LVLDASRPTTIKTRVIGQQQQMLRIDREESGLPDPAVLMGLRTRLEQALEEASALIVS
                     DYAKGVVNDPVMEAVRAICAAKGLPWIVDPKPAHKALYQGATLMTPNTKEASELAQRP
                     AKSDLEVAEAGRAILADLGLQGLLVTRSERGMALFAAEDGHTGAWMVPTEAREVFDVS
                     GAGDTVIAAFSAAVAAGADWRDAAMLANAAAGVVVAKVGTATVTPAELLAHYYPQEAN
                     "
     gene            complement(2676..>3141)
                     /locus_tag="VFV26_04555"
     CDS             complement(2676..>3141)
                     /locus_tag="VFV26_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845466.1"
                     /translation="LALAALLSLAQAPPPAPPAAAPAPEASLSYHAETFPFAWDRMIP
                     LSVNVDGLKVSSIFFNRRVVQPGFFNLLKGAEFGTRAQVEVTNTGKYPKIPGFAVAVL
                     DKDGKLLGVASGGTKVGTIKPGETETFDLNFTQVKERLPKGDRFLLAIELRN"
BASE COUNT          535 a         1051 c         1110 g          445 t
ORIGIN      
        1 tggagaactg ccccaccacg ctcaccggca agccccttcg ccccaaggat ttcgggacgg
       61 acctgcggga ctacctgaag gccacgcccc tggaccagat gggccaggac aagccggtgc
      121 cggaagaccg accgctcatc ggcggccccg tgcctgaggg ctcgtactgg aagcgcgatg
      181 acgaggtggc cccctggagc aaggcgcagc tcgaaggctg gatcagccag gacaccatct
      241 gggcctgcac cagctgcggc tactgcgagt gggcctgccc cctgcagatc agcttcgtgg
      301 acaagatcat cggcatgcgc cgctacctca ccctggagga gagcaacttc cccgccgagg
      361 cccaggtggc cttcaagggc atggagcgcc agggcaaccc ctggaacctg ccccaggcgg
      421 accgcgccaa gtgggcggat ggcctgcatg tgcccaccat cgccgagaat cccgaggccg
      481 agtacctgtt ctgggtgggc tgcgcgggct cctacgatgc cgcgggccag agggtctccc
      541 aggccctggt gaagctgctg aaggccgcga atgtctcctt cgccatcctg ggcacggagg
      601 agagctgcac ctgcgaatcc gcccggcgcc tgggcaacga gtacctcttc cagacggcca
      661 cggaagcgaa catcgaaacg ctcaagggcc acggcgtgaa gaaggtcatc accaactgcc
      721 cccactgcct caacaccctg aagaacgagt atccggcctt cggcggcgac ttcgaggtgg
      781 tgcatggcac cgagctggtg gccaagctca tcagcgaagg caagctgaag atggaacaga
      841 ccgtggacgt ggacctcacc taccacgacc cctgctacct cagccgcatc aacggccagg
      901 tggaggcccc ccgcgccatc ctcggcgcca tccccggcgt gaagctcacg gagatggaga
      961 agcacggcga agccaccatg tgctgcggcg ccggcggcgg ccgcttctgg ctggaggagc
     1021 acctgggcaa gcgcgtgaac cacgagcgct tcgaacaggc catggagacc aaggccacca
     1081 ccatcgccgt gggctgcccc ttctgcaacg tcatgctgaa caacgccgca ggcgagacca
     1141 accacgaggg cgtggccacc accgacatcc tcgaactggc ggccagggcg ctgaagtagg
     1201 ctcccgccgc cacggctgcc aggcaattcc gataagctgt cccccatgcc gctcgatcca
     1261 cgcctcctcg agatcctctg ctgcccggcc tgccacggcg acctggtgga gctgccggaa
     1321 gcgctgcgct gccagggctg cggcctgcgc tatcccatcg aggacggcat ccccgtgatg
     1381 ctggtggacc aggccaagaa ggcggatcga tgaggctcga ccgcgcccag gccgaatccc
     1441 tgctccaccg catggcgggc tgcaaggtgg ccgtcctggg cgacgtcatg ctggacgagt
     1501 acctgttcgg cgaggtgaac cgcatctcgc cggaggcgcc cgtgcccatc gtgcgcgtgg
     1561 tgcgcgagca ggcggtgctg ggcggcgcgg ccaacgtggc cgccaacctc aaggccctgg
     1621 gggcggaacc cctgctcatc ggcaccctcc agaaggatgc cgcgggcgac cggctgctgg
     1681 gcctgctggg ccggctgggc gtctccatct cgggactggt cctggatgcc tcccgtccca
     1741 ccaccatcaa gacccgcgtc atcggccagc agcagcagat gctccgcatc gaccgcgagg
     1801 aatccgggct ccccgatccg gcggtgctga tgggcctgcg gacccgcctg gagcaggccc
     1861 tggaggaggc ctcggccctc atcgtgtcgg actatgccaa gggcgtggtg aacgaccccg
     1921 tgatggaggc cgtgcgcgcc atctgcgccg ccaagggcct gccctggatc gtggatccca
     1981 agcccgcgca caaggccctc taccaggggg cgacgctcat gacgcccaac accaaggagg
     2041 cgtctgagct ggcccagcgg ccggcgaagt ccgatctgga ggtggcggag gcgggccggg
     2101 ccatcctggc ggacctgggg cttcaggggc tgctggtgac gcgcagcgaa cggggcatgg
     2161 ccctcttcgc ggcggaagat ggccacaccg gggcgtggat ggtgcccacg gaggcccggg
     2221 aggtcttcga tgtcagcggc gcgggcgaca cggtcattgc cgccttcagc gccgccgtgg
     2281 ccgcgggggc cgattggcgt gatgcggcca tgctggccaa tgccgccgcg ggcgtggtgg
     2341 tcgccaaggt gggcaccgcc accgtcaccc cggccgagct gctggcgcac tactacccgc
     2401 aggaagcgaa ttgatcatcc tgcgcggctg aagatccgtt tgacggcctg tttcggggcc
     2461 aggacatgct cgaatcccgg cgtgtccggg caggggagca ggaaagccag gcttgcgagc
     2521 gtggtgaggc agagcatgaa gaggggcccc caggtccggg acgggcggcg gaggtagagg
     2581 tggctctgcg ccagcgcgac cgtccgctgg agctggccgt cccggtagat gccgacaagg
     2641 gggccgtagc ctgggcggga gatcccgggc ggggttcagt tcctcagttc gatggccagc
     2701 aggaagcggt cgcccttggg gaggcgctcc ttcacctggg tgaagttcag atcgaaggtc
     2761 tcggtctcgc caggcttgat ggtgccgacc ttggtgccgc cggaggccac gcccaggagc
     2821 ttgccgtcct tgtccagcac ggccacggcg aagccaggga tcttcggata cttgccggtg
     2881 ttggtcacct ccacctgggc ccgcgtgccg aattcggcgc ccttgagcag gttgaagaat
     2941 ccgggctgca ccacgcggcg gttgaagaag atgctgctga ccttgaggcc gtccacattc
     3001 acggacaggg ggatcatgcg gtcccaggcg aaggggaaag tctcggcgtg gtacgacaga
     3061 gacgcttcag gcgccggcgc ggccgcggga ggggccggag gcggggcctg ggccaggctg
     3121 aggagggcgg cgagggcgag g
//
LOCUS       DASUDT010000220         3525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_584793, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000220 DASUDT010000000
VERSION     DASUDT010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3525
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_584793"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VFV26_04560"
     CDS             complement(<1..381)
                     /locus_tag="VFV26_04560"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX4845467.1"
                     /translation="MNPDAGRLLAGLGTGLCGGVLSGLFGVGGGIVMVPLLAVVLGLD
                     QHRAQGATLAAMLLPTGLPAVIQYHRRGIRTNLRLVGVLVLAFLFGIYGGARVANRIP
                     SEPLRWGYAAFLVLLAVMTHVRREP"
     gene            complement(378..1223)
                     /locus_tag="VFV26_04565"
     CDS             complement(378..1223)
                     /locus_tag="VFV26_04565"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HEX4845468.1"
                     /translation="MHHGQGHYLKLEGFGEVRRILVHDPPGAEGRSLPLVLALHGTGG
                     SGRLMSLLSGLSRLADERGFRVAYPQALGEVGTEDPARGAAWNAGPGLGCPLHPDVDD
                     VAFLGAVVARVARHAPIDSRRLYVAGFSNGARMAYRMALAAPWVAAIAAVAGAPVWGE
                     APARAVPTLAFHGTEDQHIPYGGGVGPQGRRIPALSAPEALARWAALMGCGEGPVRDV
                     LDSHHVDLWAGGGCEVGLWTVAGMGHAWPGGRPYAPGADRPAMDLSAAHLIWAFFEAH
                     SLEEA"
     gene            1283..2059
                     /locus_tag="VFV26_04570"
     CDS             1283..2059
                     /locus_tag="VFV26_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845469.1"
                     /translation="MQVQLSDDVVLDGRRAVWLPRQKTLVLSDLFLGLGAARRRRPDP
                     LPATSQIEIWERLFSLIDDHDPAQIVLLGDLKPSQGAVEGDEAEELRTLFRKLKGPGR
                     QVVQVVGHPERSCGPALEGTGIQPVEQHRVGPFTLIHRRRIFVYPRHDSAQGFWINGG
                     VHPLFAVPAPGPTGEPDWMRLPAFLYTGFALVMPPFVSYAQGFEVIQAERLPRQARAW
                     KLLADRLSPLDLADLPPAPESLRNLTRPPRRGKDSGKGGE"
     gene            complement(2063..2542)
                     /locus_tag="VFV26_04575"
     CDS             complement(2063..2542)
                     /locus_tag="VFV26_04575"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX4845470.1"
                     /translation="MRMFFTALLSLPLLAGGGTVAFKQTAFLAEVAATEQEKAKGLMY
                     RQSLAKDRCMFFVYSEDSSHAIWMKNCLIALDVAWVDAEGRVVETAEHVPPCSPMRGD
                     DCPTYGGNVPARHFVEFAAGTFKRIGLKKGDRLGWDLVLDDGRAVRGGAPMPKAKKK"
     gene            2680..>3525
                     /locus_tag="VFV26_04580"
     CDS             2680..>3525
                     /locus_tag="VFV26_04580"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HEX4845471.1"
                     /translation="MRARTLLLIPAFGTLALAAPSPGSGLLALRASTAIRLDGRLDES
                     VWREAPAASGFIQEWPWRGQPARQRTEVRVLYDARFLYIGARMHHDRALDGGQATVVR
                     RLHRRDQDSQSDWFSVALDSDHDRRTAQVFEVNAAGVQRDQTIYNDSTFDASWDGVWE
                     SATTADADGWTVELKIPLSLLRFKGGMEAQTWGINFSRTDQGNLRESSRWMVVPRGES
                     GFVSRFPDLTGLENLDPQPRREFIPYLGLARKFETARGFDDRRWEARAGLDARLSLNT
                     HAQVDL"
BASE COUNT          541 a         1336 c         1172 g          476 t
ORIGIN      
        1 cggttcccgg cggacatggg tcatgacggc cagcagcacc aggaaggccg cgtagcccca
       61 gcggagcggc tccgatggga tgcggttggc cactcgcgcc cccccgtaga tgccgaaaag
      121 gaaggccagc accaggacgc ccaccagccg caggttggtg cggatgcccc ggcggtggta
      181 ctggatcacc gccggcaggc ccgtgggcag cagcatggcc gccagggtcg ccccctgggc
      241 gcggtgctgg tccaggccga gcaccaccgc cagcaggggc accatcacga tgccaccgcc
      301 cacgccgaag agccccgaga gcaccccccc gcaaaggccc gtccccagcc ccgccaggag
      361 gcggcccgca tccgggttca cgcctcctcc agggaatggg cctcgaagaa ggcccagatg
      421 aggtgtgcgg cggaaaggtc catggcaggc cggtccgcgc caggggcata gggccgcccg
      481 ccgggccagg cgtggcccat gcccgccacg gtccagaggc ccacctcgca gccgccgccg
      541 gcccacagat ccacatggtg ggagtccagg acgtcccgca ccgggccctc cccgcacccc
      601 atgagcgccg cccatcgggc cagggcctcg ggggcggaca gggccgggat ccggcgcccc
      661 tggggtccca cgccaccgcc gtaggggatg tgctgatcct ccgtgccatg gaaggccagc
      721 gtgggcacgg cccgcgccgg ggcctcgccc cagaccggcg ccccggccac cgccgcgatg
      781 gccgccaccc agggcgcggc caaggccatc cggtaggcca tgcgggcccc gttggagaag
      841 cccgccacat agagccgccg ggaatcgatg ggggcgtggc gggccacacg cgccaccacc
      901 gcgccgagga aggccacgtc atccacgtcc ggatgcaggg ggcagcccag gcccggcccg
      961 gcattccagg ccgccccccg ggccggatcc tcggtgccca cctcgcccag ggcctgggga
     1021 taggccaccc ggaatccccg ctcgtccgcc aggcggctca ggcccgacag cagggacatc
     1081 aggcggcccg agccgcccgt gccgtggagg gccagcacca ggggaaggct ccgcccctcg
     1141 gcccccgggg gatcatggac caggatccgc cggacctctc caaacccttc gagcttcaga
     1201 tagtggccct gcccgtgatg caccggtccc cctcccggga ttctgggccc gcgtgtgttc
     1261 caatggaagc cgggaggccc cagtgcaggt ccagctcagc gacgatgtgg tgctcgacgg
     1321 ccggcgggcc gtgtggcttc cccggcagaa gaccctggtg ctgtcggacc tgttcctggg
     1381 cctgggcgcc gcccgccgcc gccgccccga ccccctgccc gccacctcgc agatcgagat
     1441 ctgggagcgg ctcttcagcc tcatcgacga ccacgacccg gcccagatcg tcctgctggg
     1501 cgacctgaag cccagccagg gcgccgtgga aggtgacgag gccgaagagc tgcgcaccct
     1561 cttccgcaag ctcaaggggc ccggccgcca ggtggtccag gtggtgggcc accccgagcg
     1621 cagctgcggc cccgcgctgg agggcacggg gatccagccc gtggagcagc accgggtggg
     1681 gcccttcacc ctcatccacc gccgccgcat cttcgtctat ccccgccatg actcggccca
     1741 gggcttctgg atcaatggcg gtgtccatcc cctcttcgcc gtgcccgccc ccgggcccac
     1801 cggggaaccg gactggatgc gcctcccggc cttcctctat acgggcttcg ccctggtgat
     1861 gccccccttc gtcagctacg cccagggttt cgaggtcatc caggccgagc gattgccccg
     1921 ccaggcccgg gcctggaagc tgctggcgga ccgcctgagc cccctggacc tggcggacct
     1981 gcctccggcg cccgagagcc tgcgcaacct cacccgcccc ccccggcggg gcaaggacag
     2041 cggcaaaggg ggggaatagc ccctatttct tcttggcctt gggcatcggg gcgccccccc
     2101 ggacggcgcg tccatcgtcc aggaccaggt cccagcccag gcggtcgccc ttcttcaggc
     2161 cgatgcgctt gaacgtcccc gccgcgaatt cgacaaaatg ccgcgccggc acattgccgc
     2221 cataggtggg gcagtcgtcg ccgcgcatgg gactgcacgg aggcacatgc tcggccgtct
     2281 ccaccacgcg gccctccgca tccacccagg ccacatccag ggcgatgagg cagttcttca
     2341 tccagatggc gtggctgctg tcctcgctgt agacgaagaa catgcagcgg tccttggcca
     2401 ggctctggcg gtacatcaag cccttcgcct tttcctgctc cgtggccgcc acctcggcca
     2461 ggaaggccgt ctgcttgaag gccacggtgc ctccccccgc cagcaggggc agggacagca
     2521 gggcggtgaa gaacatgcgc atatcggctc cttgaatccg attatcgatg aaatgcctga
     2581 atgcgggtga aggcgcccca aaaaccgtta tacatcgcat gttgtggcat catgattcca
     2641 cgcggccgcg ggcgtcctct cccgtgcccc tggagagcca tgcgcgcacg caccctgctt
     2701 ctgatccctg ccttcggcac gctggcgctg gccgcgccca gcccgggaag cgggctgctg
     2761 gccctgcgcg cctcgaccgc catccgcctg gatgggcgtc ttgacgagtc cgtctggcgc
     2821 gaggcccccg ccgcttccgg cttcatccag gagtggccct ggcggggcca gcccgcccgc
     2881 cagcgcaccg aggtccgggt cctctacgat gcccgcttcc tctacatcgg ggcccgcatg
     2941 caccatgacc gcgccctgga tggggggcag gccacggtgg tgcgccgcct ccaccgccgg
     3001 gaccaggaca gccagagcga ctggttcagt gtcgccctcg attccgacca cgaccggcgc
     3061 acggcccagg tgttcgaagt gaatgccgcg ggggtccaaa gggaccagac catctacaac
     3121 gacagcacct tcgatgccag ctgggacggc gtgtgggaga gcgccaccac cgcggatgcg
     3181 gacggctgga cggtggaact gaagattccc ctctccctgc tgcgcttcaa ggggggcatg
     3241 gaagcccaga cctggggcat caacttcagc cgcaccgacc aggggaacct gcgggaatcc
     3301 agccgctgga tggtggtgcc ccgcggtgaa agcggtttcg tgagccgctt tccggatctc
     3361 acggggctgg aaaacctcga tccccagccc cgccgggaat tcatccccta tctggggctg
     3421 gcccgcaaat tcgagaccgc gcgcggcttc gatgaccgcc gctgggaggc ccgggccggc
     3481 ctggatgcgc gcctgagcct gaacacccac gcccaggtgg acctt
//
LOCUS       DASUDT010000221         3528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1667477, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000221 DASUDT010000000
VERSION     DASUDT010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667477"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1441)
                     /locus_tag="VFV26_04585"
     CDS             complement(113..1441)
                     /locus_tag="VFV26_04585"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:TIGR01358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEX4845472.1"
                     /translation="MPSWNPHSWQHCPALQQPAYADPSELEAVLARLRRLPPLVVPQE
                     VDRLRGLLAEAAAGRRFLLQGGDCAEQFKDCAPEAIEGKLRVLLQMSVALTHGGRKPV
                     VRVGRIAGQFAKPRSKPTELVRGRELPSYRGDLINGLEADEASRRADPGRMLEAYFHA
                     CATLNHLRALTASGFADLHHPERWELPGAPGQVPEYRRTLDQVRESLDFLEALGGVQR
                     DVLERIDFFTSHEALLLPYEEALTRWVGEAAAYYNLGAHTLWVGERTRQLDGAHLEYL
                     RGIRNPIGVKVGPSATPGHLAALLDRLDPDREPGRITLISRFGAAKIQEALPPLLKAV
                     QATDHPVLWSCDPMHGNGAESASGLKTRDFAAILSELRQAFEIHRAHGGHLGGVHIEL
                     TGEAVTECTGGSEGLSEADLAKAYETGCDPRLNGTQSLEMAFLIAEMMRG"
     gene            complement(1667..2380)
                     /locus_tag="VFV26_04590"
     CDS             complement(1667..2380)
                     /locus_tag="VFV26_04590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4845473.1"
                     /translation="MIHILVVEDEPSLCQLLLNNLGYEGYSVETAGDGVPALAAHAAR
                     RADLIVLDLMLPQLDGFEVLRILREGKDDVPVLLLTARGEEVDRVKGLSLGADDYLVK
                     PFSVLELIARVKAILRRTRPVDRPPLLRSGPFRFDLPRLEARRDGKPLELTPREFRLL
                     EILITHAGRTHSRKELLQLAWEPDARPSARTVDVHIANLRKKLGEEQGKPWITTVGGE
                     GYRWITAVETEPGPPPASS"
     gene            complement(2726..>3528)
                     /locus_tag="VFV26_04595"
     CDS             complement(2726..>3528)
                     /locus_tag="VFV26_04595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4845474.1"
                     /translation="VAYDAQQKAFRQKLKRQYWTVSAVAALVGVAILLGLWLRHRTRR
                     RAVLDGDRLASMTHSLKTPLAILKFRCDSLRLGRLSPERADEELLKISEEVDHLTTII
                     ETGLRVIRGGGASGPRGQATQAWLQEVAEDLRPGFEMEGRPLDLSLTPDAGHAPLPSL
                     RSAVLTLLENALAHGKGRVTLETWRARRRLCIQVSDEGGGLEPDQIKSLGKPFQRLRE
                     SGKEGFLREGQGLGLSLLVQVAEQEGWGLTFASGPGEGFSALLEIPAA"
BASE COUNT          487 a         1192 c         1304 g          545 t
ORIGIN      
        1 ggcccccgcc tgcattgcct ttcgctcttc cttttcgttt cgcttccccg gcttcgttca
       61 acgccccagt gcaggcgggg ccgatcgctt catgcgttga gcgcgaaacc cgctaccccc
      121 gcatcatctc cgcgatgagg aaggccatct ccaggctctg ggtgccgttg aggcgggggt
      181 cgcagccggt ttcgtaggct ttggcgaggt cggcttcgga gaggccttcg ctgccgccgg
      241 tgcattcggt gacggcctcg ccggtgagct cgatgtggac gccacccaga tgcccgccgt
      301 gggcgcggtg gatctcgaag gcctggcgca gctccgacag gatggcggcg aagtcgcggg
      361 ttttaaggcc gctggcgctt tcggcgccgt tgccgtgcat gggatcgcag ctccacagca
      421 cggggtggtc cgtggcctgc acagccttca gcagcggggg cagggcctcc tggatcttcg
      481 cggcgccgaa gcgggagatg agggtgatgc ggccgggctc gcggtccggg tccaggcggt
      541 ccagcagggc cgccaggtgg cccggcgtgg cgctggggcc caccttcacg ccgatggggt
      601 tgcggatgcc ccgcaggtac tcgaggtggg cgccgtccag ctggcgggtg cgctcgccca
      661 cccagagggt gtgggccccc aggttgtagt aggcggcggc ttcgcccacc cagcgggtga
      721 gggcctcttc gtagggcagc agcagggcct cgtggctggt gaagaagtcg atgcgctcga
      781 gcacgtcccg ctgcacgccg cccagggcct ccaggaagtc gagggattcg cgcacctggt
      841 ccagggtgcg ccggtactcg ggcacctggc cgggggcgcc gggcagctcc cagcgctcgg
      901 ggtggtgcag gtcggcgaag ccgctggcgg tgagggcccg caggtggttg agggtggcgc
      961 aggcgtggaa gtaggcctcc agcatgcggc cggggtcggc ccgccgcgaa gcctcgtccg
     1021 cctccaggcc gttgatgagg tcgccccggt agctgggcag ctcccggccc cgcaccagct
     1081 ccgtgggctt gctgcggggc ttggcgaact ggccggcgat gcggcccacg cgcaccacgg
     1141 gcttgcgccc gccgtgggtg agggccacgg acatctggag cagcacgcgc agcttgcctt
     1201 cgatggcctc gggcgcgcag tccttgaact gttcggcgca gtcgccgccc tgcagcagga
     1261 agcggcggcc cgcagcggcc tcggccagca ggccccgcag ccggtccacc tcctggggaa
     1321 ccaccagggg cggcaggcgc cgcaggcggg ccagcacggc ctccagctcc gaggggtcgg
     1381 cataggccgg ctgctgcagg gcgggacagt gctgccagct gtggggattc caggagggca
     1441 tcggacctcg ggggcgagga ttcagtctag tgcacctcgc ctgaaatacc tggatcaagg
     1501 gggtgatggc gaggtgcact tccatcgggg catagcccct ctggtgcccc atcgcgcagc
     1561 cgcgctgggg ctgtcacccc cctgggggca ctgccgtgcc cccggacccc cgccacgtgg
     1621 tgcccataag caggccagat gatccagcta tttcgcgcgg gcaccactag ctgctcgccg
     1681 gcggcgggcc gggctcggtc tccacggccg tgatccagcg gtagccctcg ccgcccacgg
     1741 tggtgatcca gggcttgccc tgctcctcgc cgagcttctt gcggaggttg gcgatgtgga
     1801 cgtccaccgt gcgggcgctg gggcgggcat cgggctccca ggccagctgc agcagctcct
     1861 tgcggctgtg ggtgcggccc gcatgggtga tgaggatctc cagcagccgg aactcccggg
     1921 gggtcagctc caggggcttg ccgtcgcgcc gggcctccag gcggggcagg tcgaagcgga
     1981 aggggccgga gcgcagcagg ggcggccggt ccacggggcg ggtgcggcgc aggatggcct
     2041 tcacgcgggc gatgagctcc agcacggaaa agggcttcac caggtagtcg tcggccccca
     2101 ggctcaggcc cttcacgcgg tccacctcct cgccgcgggc ggtgagcagc agcacgggca
     2161 cgtcatcctt gccttcgcgg aggatgcgca gcacctcgaa gccgtccagc tggggcagca
     2221 tcaggtccag cacgatgaga tccgcccgcc gggccgcgtg ggccgccagg gcgggcacac
     2281 cgtcccccgc cgtctcgacg gagtaccctt cgtagcccag gttgttgaga agcagctggc
     2341 agagggacgg ctcgtcctcc accacgagga tgtggatcac ggtgtctcgc tcaaggatcg
     2401 tgatcccaag atgcacgcat tgacttggaa gggcaagcgg gcctggctgc aatttcctag
     2461 cggtgtcgtt cgaggccggc ccctcagacc gccttgcgat ccaatattta gaaaatcacc
     2521 acagagacac ggagaccaca gaggtggcac ggaggcctcc gtgcccctcc atcatgggca
     2581 ggccgaaggc cgcttccggc aaggccgaaa gccacaggag gcgccagacc cggatccttt
     2641 tttgggcatc cgagtctggc gcctcctgtg tgcccatgct ctgtgtctcc gtggtggatc
     2701 tctaacgatt gaacgcgagc ctgtatcagg ccgccgggat ctccagcagg gccgagaagc
     2761 cctcgccagg acccgatgcg aaggtgaggc cccagccttc ctgctcggcc acctgcacca
     2821 gcaggctcag gcccaggccc tggccttcgc gcaggaagcc ctccttgccg gattcgcgga
     2881 gccgctggaa gggcttgccc agggacttga tctgatcggg ctccaggcca ccgccctcgt
     2941 cgctcacctg gatgcagagg cgccgccggg cccgccaggt ctccagggtg acgcggccct
     3001 tcccgtgggc cagggcgttc tccagcaggg tgagcacggc ggagcgcagc gagggcaggg
     3061 gcgcgtggcc cgcgtccggc gtgaggctca ggtccagggg gcggccctcc atctcgaagc
     3121 cggggcggag gtcctcggcc acctcctgga gccaggcctg ggtggcctgc ccccgggggc
     3181 cggaggcgcc gccgccgcgg atcacccgga ggccggtctc gatgatggtg gtcaggtgat
     3241 ccacttcctc gctgatcttg agcagctcct cgtcggcgcg ctccgggctc aggcggccca
     3301 gccgcaggga atcgcagcgg aacttgagga tggccagggg cgtcttgagg ctgtgcgtca
     3361 tggaggcgag gcggtcgccg tccagcacgg cccggcggcg ggtgcggtgc cgcagccaga
     3421 ggcccaggag gatggccacc cccaccaggg cggctacggc ggacacggtc cagtactggc
     3481 gtttcagctt ctgccggaag gccttctgct gggcgtcgta ggccacgc
//
LOCUS       DASUDT010000222         2429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_651322, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000222 DASUDT010000000
VERSION     DASUDT010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651322"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..1506
                     /locus_tag="VFV26_04600"
     CDS             265..1506
                     /locus_tag="VFV26_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HEX4845475.1"
                     /translation="MSQLKPFRAHRPRPELAAQVASVPYDVVNTQEAAELAKGNPHSF
                     LHVGRPEIDLPADTDIHADAVYAKGVSNLMRMIEDGTLFQENAPCLYVYQQRMGDHVQ
                     AGLVGLCSVQEYETGAIKRHEFTRKDKEDDRTRHLTEQNANAEPVFLTYKAVPYIDHI
                     VNDIRKQVPAYDVVTPDGIGHTVWVVSGETVVYELVNLFNGVPALYIADGHHRTAAAI
                     RYGQARRAAAGASATGDEPFESFMAVVFPHDQLKIMDYNRVVKDLNGLSQDAFLEKVR
                     EKFDVAVSAHRAPQAPTTFGMYLGGTWYELKAKPGSFPASDPVRGLDVSILQENLLAP
                     ILGIDDPRTNTRIDFVGGIRGMDELERRVKEGCAVAFSVYPTSLTQLMSVADAGEVMP
                     PKSTWFEPKLRSGLLVRMYEG"
     gene            1634..>2429
                     /locus_tag="VFV26_04605"
     CDS             1634..>2429
                     /locus_tag="VFV26_04605"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4845476.1"
                     /translation="MHILIADAFDAKLPERLAAFGTVSSDMATLGQAQVLLVRSKTQV
                     NADLLAQAPALKLVIRGGVGMDNVDKKLCAEKGIKAVNTPRASSVAVAEMAMAFMVAI
                     PARLIEAHTSMKEGKFLKNELKRTELFRKTLGLVGAGAIASEVAKRAQAFGMEVIAFD
                     PFLKEHPIAQLVSLDELAAKADVISLHTPLTDETRGMINAAFLAKAKDGVMIINTGRG
                     KCVNEADLAAALQSGKVKAYGTDVWPSDPPPADCPLLSAPNVFMAPH"
BASE COUNT          445 a          918 c          705 g          361 t
ORIGIN      
        1 ggagacctgc cgggtggagc ggaccatcga cctgcccctg accgagatcc tcatgaacgc
       61 tgcactgatc accgattccc gggcccccgg agccacccac gacccgtctg cggggcttcc
      121 cgggttttga cggtttgggc ccttccgggc tcccgtctgg gactttcgtc aaaaccggcc
      181 cttccggaat cacccaaagg gcccccggcg cggaataatg gcgccagtgc ggccccgcgg
      241 gggccccttc gaaggcaggt gcccatgtct cagctgaagc ccttccgcgc ccaccgcccc
      301 cggcccgagc tggccgccca ggtggcctcg gtgccctacg acgtggtgaa cacccaggag
      361 gccgctgagc tggccaaggg caatccccac tccttcctcc acgtgggccg ccccgagatc
      421 gacctgcccg cggacaccga catccatgcg gacgcggtct acgccaaggg cgtgtccaac
      481 ctcatgcgca tgatcgagga cggcaccctc ttccaggaga acgccccctg cctctacgtc
      541 taccagcagc gcatgggcga ccacgtccag gcgggcctgg tgggcctctg ctccgtgcag
      601 gagtacgaga ccggcgccat caagcgccac gagttcaccc gcaaggacaa ggaggatgac
      661 cgcacccggc acctcacgga gcagaacgcc aacgccgagc ccgtcttcct cacctacaag
      721 gccgtcccct acatcgacca catcgtcaac gacatccgca agcaggtgcc ggcctacgac
      781 gtggtgacgc ccgatggcat cggccacacc gtgtgggtcg tctccggcga gaccgtggtc
      841 tacgagctgg tcaacctctt caacggcgtg cccgccctct acatcgccga tggccaccac
      901 cgcaccgccg ccgccatccg ctacggccag gcccgccgcg ccgccgccgg cgcctcggcc
      961 acgggcgacg agcccttcga aagcttcatg gccgtggtct tcccccacga ccagctgaag
     1021 atcatggact acaaccgcgt ggtgaaggac ctgaacggcc tcagccagga cgccttcctc
     1081 gagaaggtcc gcgaaaagtt cgacgtggcc gtctccgccc accgcgcccc ccaggctccc
     1141 accaccttcg gcatgtatct cggcggcacc tggtacgagc tgaaggccaa gcccggcagc
     1201 ttccccgcca gcgaccccgt gcgcggcctg gacgtgagca tcctccagga gaacctgctc
     1261 gcccccatcc tcggcatcga cgatccccgc accaacaccc gcatcgactt cgtgggcggc
     1321 atccgcggca tggacgagct ggagcgccgc gtgaaggaag gctgcgccgt ggccttctcc
     1381 gtctacccga cctcgctcac ccagctcatg agcgtggccg acgccggcga agtcatgccc
     1441 cccaagtcca cctggttcga acccaagctc cgctccggcc tgctggtccg gatgtacgag
     1501 ggataaaaaa attcaccacc aagacaccaa ggcaccaaga actgcaaaag aaaatctttt
     1561 ggtgtctttt cttggtgcct tggtgccttg gtggtgatca gttctctttg aacgataaaa
     1621 acacggagtc ctcatgcaca tcctcatcgc cgacgccttt gatgccaagc tgccggagcg
     1681 cctcgcggcc ttcggcaccg tcagctccga catggccacc ctcgggcagg cccaggtgct
     1741 gctcgtccgc tcgaaaaccc aggtgaatgc cgacctgctg gcccaggccc ccgccctcaa
     1801 gctcgtcatc cgcggcggcg tgggcatgga caacgtggac aagaagctct gcgccgagaa
     1861 gggcatcaag gccgtgaaca ccccccgggc cagcagcgtg gccgtggcgg aaatggccat
     1921 ggccttcatg gtggccatcc ccgcccgcct catcgaggcc cacacctcca tgaaggaggg
     1981 caagttcctc aagaacgagc tgaagcgcac cgagctcttc aggaagaccc tgggcctcgt
     2041 gggcgccggc gccatcgcct cggaagtggc caagcgcgcc caggccttcg gcatggaggt
     2101 gatcgccttc gatcccttcc tgaaggagca ccccatcgcc cagctggtga gcctcgacga
     2161 gctggccgcc aaggccgatg tcatcagcct gcacacgccg ctcaccgacg agacccgcgg
     2221 catgatcaac gccgccttcc tggccaaggc caaggacggc gtcatgatca tcaacacggg
     2281 ccgcggcaag tgcgtgaacg aggccgacct cgcggcggct ctccagagcg gcaaggtgaa
     2341 ggcctacggc accgacgtgt ggcccagcga tcccccgccg gcggactgcc ccctgctcag
     2401 cgcccccaac gtcttcatgg ccccccaca
//
LOCUS       DASUDT010000223         3911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_916439, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000223 DASUDT010000000
VERSION     DASUDT010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916439"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFV26_04610"
     CDS             complement(<1..470)
                     /locus_tag="VFV26_04610"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX4845477.1"
                     /translation="MAKLLVHESAGVREFEIVDNEVHMGRELDNTLRLPDPSISRHHC
                     VLRKVGGGYEIQDLQSSNGVLVNGNRVQASPLRNGDRITLGQVQLTFQDPLSEVGATV
                     AVSREEANHPPLGTVRMSASELAAIHTGKPKAEAPDAISTGPIPIAPATATPPVP"
     gene            611..1483
                     /locus_tag="VFV26_04615"
     CDS             611..1483
                     /locus_tag="VFV26_04615"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylation factor-like protein"
                     /protein_id="HEX4845478.1"
                     /translation="MVLFNAATKELTAKIVYYGPGLCGKTTNLQHVYDTLPGEGRGKM
                     LSLATQTDRTLFFDFLPIDLGTIRGMKTRVQLYTVPGQVFYDATRKLVLRGADAVVFV
                     ADSQAPALESNKESFQNLIANLKDQGAELAKIPHVIQWNKRDTPNALPVATLDKEINL
                     YHAPTFEACAMRGEGVRETLTGVAKLVLKSLAEKYGGGVVEEPAVLMGGTPAAPRPRA
                     EESTRPLEVEELSAGELLEEIDEIPVDSRPASPAPTPAHMPHSSVVEVPVVLDRSLFN
                     GENPVEIKLKLYIK"
     gene            1572..3044
                     /gene="gltX"
                     /locus_tag="VFV26_04620"
     CDS             1572..3044
                     /gene="gltX"
                     /locus_tag="VFV26_04620"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX4845479.1"
                     /translation="MSRQIVTRFAPSPTGMLHIGGVRTALFCWLFARKHGGRFILRIE
                     DTDLSRSTDDNIRIIEEGMAWCGLDWDEGPVVGDPSQWKGPHGPYRQMQRMDLYRAKI
                     QELLDKGLAYRCRCDRETLDARRKAVEAAGKVFQYNRGLDAGKGCADAGHDGGQPAAI
                     RFRMPVGGDIVVPDLIKGDTRFPADSLDDWIIARTGDGPGEIGVPTYNFCVVVDDTHM
                     EVTHVIRGDDHLNNTPKQIPLFAAFGYDLPAFAHVPMILGADGAKLSKRHGATSITEY
                     QAMGLLPSAVRLALARLSWTPKIDGKAVESAEEELLTDAQMIQLFDLADCQKSAARFD
                     MDKLQWLNQKLIQRASWQELEPHLRPFMPEAWAARPDAWKAQAIQCTQKGKSLTDMAE
                     ALRFAFERPEAFDEKAVEKFMTPVAKRALGELCALADYSHEGLEAGFNAILERHGLKT
                     KDLAQALRVALCGRPVSPGIFDTLMLVGREEVLARLERWV"
     gene            3044..3388
                     /locus_tag="VFV26_04625"
     CDS             3044..3388
                     /locus_tag="VFV26_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845480.1"
                     /translation="MDLDEFTHITLAVLEDQGAAAYAPTIIAGETVQVVQGIPEGMDH
                     REAIQETALRLGLGQAEFYFGVRSGPGEITTGFHSPEGAQFRRISEMRQGFVVSTLEA
                     CPWWTLGQGRDQ"
     gene            3650..>3911
                     /locus_tag="VFV26_04630"
     CDS             3650..>3911
                     /locus_tag="VFV26_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX4845481.1"
                     /translation="MSADLPTPEPKSLHFIEEIVETDRASGKHGGRLLTRFPPEPNGY
                     LHIGHAKSICLNFGLAKAYGGATNLRFDDTNPVKEDVEYVDSI"
BASE COUNT          673 a         1350 c         1281 g          607 t
ORIGIN      
        1 gggaccggcg gggtggcggt ggccggggcg atggggatgg gccccgtgga gatcgcatcg
       61 ggggcctcgg ccttgggctt tcccgtgtgg atggcggcga gttcggatgc ggacatgcgc
      121 acggtgccga gggggggatg attggcctcc tcgcggctca ccgccacggt ggccccgact
      181 tcggacaggg ggtcctggaa ggtgagctgc acctggccga gggtgatgcg gtccccgttc
      241 cgaagggggg aggcctgcac ccggttgccg ttcaccagca cgccgttgct gctctggagg
      301 tcctggatct cgtagccgcc gcccaccttg cgaagcacgc agtggtggcg gctgatgctg
      361 ggatccggaa ggcgcagcgt gttgtccagc tcgcgcccca tgtggacttc gttatccacg
      421 atctcgaact cgcggacacc cgcgctttcg tgcaccagca gcttggccat ggaaaccctc
      481 ggggatggtg ggatggccgg aagtgtagcg catcccagtc tcattggggg attgaacgca
      541 gatcccggtt ctttcttgac ggcctgccgt ggacccgcca atcttccccg gagatcgcga
      601 aggtgaaggc atggtgcttt tcaatgcggc caccaaggaa ctcacggcca agatcgtcta
      661 ctacggcccg ggtctttgtg gcaagacgac caatctccag cacgtctacg acaccctgcc
      721 tggagaaggc cggggcaaga tgctgtccct ggccacccag accgaccgca ccctcttctt
      781 cgacttcctc cccatcgatc tcggcaccat ccggggcatg aagacccggg tccagctcta
      841 taccgtgccc ggccaggtct tctacgacgc cacccgcaaa ctggtgctgc ggggggccga
      901 tgccgtggtg ttcgtggcgg attcccaggc cccggccctg gagagcaaca aggagagctt
      961 ccagaacctc atcgccaacc tcaaggacca gggtgccgag ctggcgaaga tcccccatgt
     1021 gatccagtgg aacaagcggg acacgcccaa cgccctgccc gtggcgaccc tggacaagga
     1081 gatcaacctc taccatgccc ccaccttcga ggcctgcgcc atgcggggcg aaggcgtccg
     1141 ggagaccctc acgggcgtgg ccaagctggt gctgaagagc ctggccgaga aatacggcgg
     1201 tggggtggtg gaagagcccg ccgtgctgat gggcggaacg ccggctgcgc cgcgtccccg
     1261 ggcggaggaa tccaccaggc ccctggaggt ggaggaactg tccgccgggg agctgctgga
     1321 agagatcgat gagatccccg tggattcccg cccggcctcc cccgccccca cccccgccca
     1381 catgccccac agcagcgtgg tcgaagtgcc ggtggtgctg gaccgcagcc tcttcaacgg
     1441 cgagaacccg gtggagatca agctgaagct gtacatcaag tagggccggg aaacgcagcg
     1501 cgtttttcgc atccgcgcgg gcgcggtacg cgcgcttggg gcacactgga ggcttgattc
     1561 gaggccctcc catgtcccgc cagatcgtca cccgcttcgc cccgtccccc accggcatgc
     1621 tccacatcgg cggggtgcgc acggcgctgt tctgctggct cttcgcccgg aagcacggcg
     1681 gccgcttcat cctgcgcatc gaggacacgg acctctcccg cagcaccgac gacaacatcc
     1741 gcatcatcga ggagggcatg gcctggtgcg gcctcgattg ggatgagggc cccgtcgtgg
     1801 gcgatcccag ccagtggaag ggcccccacg gcccctaccg ccagatgcag cgcatggacc
     1861 tctaccgcgc caagatccag gagctgctgg acaagggcct ggcctaccgc tgccgctgcg
     1921 accgggagac cctggacgcg cgccgcaagg ccgtggaggc cgcgggcaag gtcttccagt
     1981 acaaccgcgg cctggacgcg ggcaagggct gcgcggacgc gggccacgat ggcggccagc
     2041 ccgccgccat ccgcttccgc atgcccgtgg gcggcgacat cgtggtgccc gacctcatca
     2101 agggcgatac ccgcttcccc gccgacagcc tggacgactg gatcatcgcc cgcaccggcg
     2161 atgggcccgg cgagatcggg gtgcccacct acaacttctg cgtggtggtg gacgacaccc
     2221 acatggaggt cacccatgtc atccgcggcg acgaccacct gaacaacacc cccaagcaga
     2281 tcccgctctt cgccgccttc ggctacgacc tgcccgcctt cgcccacgtg cccatgatcc
     2341 tgggggcgga cggggccaag ctcagcaagc gccacggcgc caccagcatc accgagtacc
     2401 aggccatggg cctgctgccc tccgccgtgc gcctggccct ggcccgcctc tcctggacgc
     2461 cgaagatcga cggcaaggcc gtggagagcg ccgaggaaga gctgctgacg gacgcccaga
     2521 tgatccagct cttcgatctg gcggactgcc aaaagagcgc cgcccgcttc gacatggaca
     2581 agctccagtg gctgaaccag aagctcatcc agcgggcctc ctggcaggag ctggagccgc
     2641 acctgcgtcc cttcatgccg gaggcctggg cggcgaggcc tgacgcatgg aaggcccagg
     2701 ccatccagtg cacgcaaaag ggcaagtcgc tcaccgacat ggccgaggcc ctgcgcttcg
     2761 ccttcgagcg gcccgaggcc ttcgacgaaa aggccgtcga gaagttcatg acgccggtgg
     2821 ccaaacgggc cctcggcgag ctctgcgccc tcgcggacta cagccacgag ggcctggagg
     2881 caggcttcaa cgccattctc gaacggcatg gcctcaagac caaggatctg gcccaggccc
     2941 tccgcgtggc cctctgcggc aggcccgtca gccccggcat cttcgacacc ctcatgctcg
     3001 tgggccgcga ggaagtgctg gcccggctcg agcggtgggt ctgatggatc tggacgaatt
     3061 cacccacatc accctcgcgg tgctggagga ccagggcgcc gccgcctatg cgcccaccat
     3121 catcgccggg gagaccgtgc aggtggtcca gggcatcccc gagggcatgg accaccggga
     3181 ggccatccag gagaccgccc tccgcctggg cctcggccag gccgagttct acttcggggt
     3241 gcgctccggc cccggcgaga tcaccacggg cttccacagc cccgaagggg cccagttccg
     3301 gcgcatctcc gagatgcgcc agggcttcgt ggtctccacc ctggaggcct gcccctggtg
     3361 gaccctgggg cagggacggg accagtaacg gttctttccc gggcgtgctc atatccgctc
     3421 cgtcgtggcc cggggcatcg agtgggccac ccaggtggcg gcggggctgg ggtaatgagc
     3481 ctctgtccaa ccctagaagg gcatgaaatg agccacggat gaacacggat tcacacagat
     3541 gaaagctcga ctggatccgt gttcatctgt gttcatccgt ggcttcaatt gcttttggtg
     3601 ggcgatgcat gccccgggta accttgaagt tttcatcccg tgagccccga tgtccgctga
     3661 cctgccgacc ccagaaccca agagcctcca cttcatcgag gagatcgtgg agacggaccg
     3721 cgcctcgggc aaacatgggg ggcgcctgct cacgcgcttc ccgccggagc ccaacggcta
     3781 cctgcacatc ggccacgcca agagcatctg cctgaacttc ggcctggcga aggcgtacgg
     3841 gggcgccacg aacctgcgct tcgacgacac caaccccgtc aaggaagatg tggaatacgt
     3901 ggattccatc c
//
LOCUS       DASUDT010000224         3305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_430324, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000224 DASUDT010000000
VERSION     DASUDT010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430324"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="VFV26_04635"
     CDS             complement(<1..463)
                     /locus_tag="VFV26_04635"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX4845482.1"
                     /translation="MAQRYQLLIRDRHGFERTVPLTRSATIGRQSLCDVVLSDAMISR
                     NHLRLELQDDTWWAEDLQTTHGSFYKDQPLGRQAWEPGAPLHLADGAYTLVLLRSDQT
                     SSEVHLQAILEAAQLLAEEVDLEDMLEQSLDRLLTISGTDRGFLMLLEDGEL"
     gene            579..1592
                     /gene="ruvB"
                     /locus_tag="VFV26_04640"
     CDS             579..1592
                     /gene="ruvB"
                     /locus_tag="VFV26_04640"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEX4845483.1"
                     /translation="MHRHPDLDPSAAQEDPIEYSLRPQRLQEYIGQVKVKARLDIALQ
                     AAAKRGDVLDHVLLFGPPGLGKTTLAHVLANEMGAPCKVIQAPALEKKGDLAAILTNL
                     EAGEFLFIDEIHRLSAPIEEMLYSAMEDRKLDILIGQGPSAQTLKVDLRPFTLVGATT
                     RAGLISKPLHDRFGMVHRLEFYTRAELAIIARRSSDLLGIHLAAEGAEAIARRSRGTP
                     RICNRLLRRCRDYAEVKGDGTITMASAEACLKLHEVDDLGLDGLDREYLQAICHKHRG
                     GPVGLRTLAAALGEDEGALEDLVEPYLMQVGFLDRTPQGRKATDAAYAYLGVASDPGP
                     LFR"
     gene            complement(1550..2059)
                     /locus_tag="VFV26_04645"
     CDS             complement(1550..2059)
                     /locus_tag="VFV26_04645"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX4845484.1"
                     /translation="MAVFNHKSKPESAPAIHSLLGKDVTLTGEIHTGSQSLRIEGTVD
                     GIIHSTGEVSIAPGGLVKGTIFAKHLVVTGRAEGTMKITDCLEIHGTGYVEGDVEVGS
                     LVVDEGGTLQGVCIRKDQTRNLDANGAAKGGESPPSQARRQGLQEGRNQVLRRVQRNS
                     GPGSEATPR"
     gene            complement(2077..3063)
                     /locus_tag="VFV26_04650"
     CDS             complement(2077..3063)
                     /locus_tag="VFV26_04650"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX4845485.1"
                     /translation="MSTHEPERRRAVRSSRPDSVRWLTVMVVFSHRTIRWSLTRQTML
                     WVLGLVVGFSALAMIGSGYGFWATKKIMSFGRLQKETQEQQEQLRSSLDQAQALEAEV
                     AALRQQHTELLKLLDPKAGAIDAAPLPAPAGQSSSASAPPPPPGARERLSRLKQDLDY
                     TAKQAAVVRARMEPVIRAWSHTPSIPPTAGYLSSGYGVRVSPFSRGNEAGDGLLGYHT
                     GIDISNVIDTPIQATADGEVVEAGWMDRYGWGVRVRHTSVQETLYAHLNHVSVKAGQK
                     VSRGAILGTMGRSGNATGVHLHYEVRLNGRPTNPQPYLRLQRQWLRALGKPS"
     gene            complement(3123..>3305)
                     /locus_tag="VFV26_04655"
     CDS             complement(3123..>3305)
                     /locus_tag="VFV26_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX4845486.1"
                     /translation="AWAGWAAVAAMLAREQWLVRGGDLSRIDQAFFTLNSFVGIVFFL
                     GHALEWWLSRSLLAPV"
BASE COUNT          542 a         1073 c         1141 g          549 t
ORIGIN      
        1 tgagctcgcc atcctccagg agcatgagga agccgcgatc cgtgccggag atggtgagga
       61 ggcggtccag ggactgttcg agcatgtcct ccaggtccac ttcttcggcc aggagctggg
      121 cagcctccag aatggcctgg agatggactt cggaactggt ctggtcgctc ctgagcagga
      181 cgagggtgta ggcgccatcc gccaggtgga gcggagcccc gggttcccag gcctggcgcc
      241 ccagtggctg atccttgtag aagctgccgt gggtggtctg gagatcctcg gcccaccagg
      301 tgtcgtcctg caactccagg cgcaggtggt tgcggctgat catggcgtcg gaaagcacca
      361 catcacagag gctctgccgc ccaatggtgg cggaacgggt gagcggcacg gtgcgctcga
      421 acccgtggcg gtctcggatc aggagctggt accgctgggc cacggcgtct cccgcggaaa
      481 ggcctcaaga ggaaggaagg gcggatctgg gcttcgaccc caagattatc cgcccactgg
      541 ctggacacaa gtggaagtcc cgtgagggaa tagataccat gcaccggcac cccgacctcg
      601 acccctccgc cgcccaggag gatcccattg aatattccct gaggcctcag cgcctccagg
      661 aatatatcgg ccaggtgaag gtgaaggccc ggctggacat cgccctccag gcggcggcga
      721 agcgcggcga tgtgctggac catgtgctgc tgttcggccc ccccgggctg ggcaagacca
      781 ccctggccca tgtcctggcc aacgagatgg gcgccccctg caaggtgatc caggcccctg
      841 cgctggaaaa gaagggggac ctcgcggcca tcctcaccaa cctggaggcc ggggaattcc
      901 tcttcatcga cgagatccac cggctgtctg cccccatcga ggagatgctc tactcggcca
      961 tggaggaccg gaaactggac atcctcatcg gccagggccc cagcgcccag acgctgaaag
     1021 tggatctccg ccccttcacg ctggtgggcg ccaccacccg ggccggcctc atctcgaaac
     1081 ccctgcacga ccgcttcggc atggtccacc gtctggagtt ctacacccgg gcggaactgg
     1141 cgatcatcgc ccgccggtcc tcggacctgc tgggcatcca cctggccgcc gaaggggccg
     1201 aagccatcgc ccgccgcagc cgggggaccc cgcgcatctg caaccgcctg ctccggcgct
     1261 gccgggacta cgcggaggtg aaaggcgatg gcaccatcac catggcatcc gccgaggcct
     1321 gcctgaagct tcacgaagtg gacgacctgg gcctggacgg cctggaccgg gagtacctcc
     1381 aggccatctg ccacaagcac cgcggcgggc ccgtgggtct gcgcaccctg gcggcggccc
     1441 tgggcgagga tgagggggcg ctggaggacc tggtggagcc ctacctcatg caggtggggt
     1501 tcctggatcg gacgccccag ggccgcaagg ccacggatgc ggcctacgcc tatctgggag
     1561 tggcttcgga tccggggccg ctgttccgct gaacgcgtct cagaacttgg tttcgacctt
     1621 cttggagtcc ttgtcgccgg gcttgggaag ggggagattc cccccccttg gcggcgccgt
     1681 tggcgtccag gttgcgggtc tggtccttgc ggatgcacac gccctgcagg gtgccgcctt
     1741 cgtccaccac gagggaaccg acttccacgt ccccttcgac gtagccggtg ccgtggatct
     1801 cgaggcagtc ggtgatcttc atggtgcctt cggcgcggcc cgtcaccacc aggtgcttgg
     1861 cgaagatggt gcccttcacc aggccgccgg gcgcgatgga aacctcgccg gtggaatgga
     1921 tgatgccgtc cacggtgcct tcgatgcgaa ggctctggga gccggtgtgg atctcgccgg
     1981 taagcgtcac gtccttgccc agcagcgaat ggatggcggg cgcggattca ggcttggact
     2041 tgtggttgaa gactgccatg gtcactcctt cgcggatcag gacggcttgc cgagggcgcg
     2101 gagccactgg cgctggaggc ggagataggg ctgagggttg gtgggcctcc cgttcagccg
     2161 cacctcgtag tggagatgga cgccggtggc gttccccgag cgtcccatgg tccccaggat
     2221 agccccccgg gacaccttct gcccggcttt cacgctcacg tggttgaggt gggcgtacaa
     2281 ggtctcctgc acgctggtgt ggcgcacgcg gacgccccag ccgtagcggt ccatccaccc
     2341 ggcctccacc acttcgccat cggctgtggc ctggatcggg gtgtcgatga cattgctgat
     2401 gtcgatgccg gtgtggtagc ccagcaggcc atctccagcc tcgtttccgc gggagaaggg
     2461 gctcacccgc acgccgtacc cggaactgag gtagccggcg gtgggaggga tggagggggt
     2521 gtggctccag gcccggatta caggttccat gcgggcgcgg accacggcgg cctgcttggc
     2581 ggtgtagtcg agatcctgct tcaggcgtga caggcgctcc cgcgcgccgg gcggcggggg
     2641 cggcgcgctg gcggaactgc tctgtcccgc cggtgccggg aggggtgccg cgtcaatggc
     2701 accggccttc gggtcgagga gcttcagcag ttcggtgtgc tgctggcgga gggcggccac
     2761 ttcggcttcc agggcctggg cctggtccag ggaggagcga agctgctcct gttgctcctg
     2821 ggtctctttc tggaggcggc cgaagctcat gatcttcttc gtggcccaga atccgtagcc
     2881 ggatccgatc atggccaggg cggagaaacc caccaccagg cccagcaccc agagcattgt
     2941 ctgccgggtc agcgaccagc ggatggtgcg gtggctgaag acgaccatca ccgtgagcca
     3001 ccgcacagaa tcggggcggc tggagcgcac ggcgcgtcgg cgttcaggct catgagtgga
     3061 catggccccc agcatacctg ggaagcagcg gatgatcgag tcgccttctt acagcgaagg
     3121 atctagaccg gcgccaggag cgagcgtgaa agccaccatt ccaaggcgtg tccgaggaaa
     3181 aacacgattc ccacaaaact gttcagcgtg aagaaagcct ggtcgatgcg ggacagatcc
     3241 ccgccgcgca ccagccactg ctcccgggcg agcatggccg ccaccgccgc ccatccggcc
     3301 caggc
//
LOCUS       DASUDT010000225         2844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2153513, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000225 DASUDT010000000
VERSION     DASUDT010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2153513"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1307)
                     /locus_tag="VFV26_04660"
     CDS             complement(123..1307)
                     /locus_tag="VFV26_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845487.1"
                     /translation="MARAAALLEDDTTIRMALQRLCLAGARLDVAYKAQRAAYPILTE
                     DGERLAFRMPFDDMAAWGLKPGENLALKLKDRGLEYECVVACSGQEVLEGVEACLATV
                     PRTLRRSDMHRLADFIPDQSHFKPYAATFTNTRNALIDGQVQSFGEEGLELVLRNTKH
                     DIRELLRMGEESLLDVPLTDTFRLRAPTTVAYFGENLVGLRFTRQADAGMLGQYREWI
                     QDQQALQAQQDTDDFSPRGFHEATARINRAAALPTVKVLVDRDPMLLLLTEKEDFARR
                     LAEALSRKFGLAVLDHIKGPVQAQLGPIGDGADGWGRTRMVLIHNQLRLASPLELCRQ
                     VVSQEGCPVPVILAGTEEDEAMKRHRAVSAGAVDYLAMEPFRILAILRKLDDTLKLFE
                     GA"
     gene            complement(1309..>2844)
                     /locus_tag="VFV26_04665"
     CDS             complement(1309..>2844)
                     /locus_tag="VFV26_04665"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845488.1"
                     /translation="ELSGLKSEFLANMSHEIRTPMNGIIGMTGLLLETPMEAEQRQYA
                     ETVRSCGESLLTLINDILDFSKIEAGKLELESLDFDLLTVLEDVTAVLGVKAQAKGVE
                     LGVFVDPATPLAVAGDPTRFRQILTNLMDNALKFTHEGAVEVRVRPQAQEAGQVLLKV
                     EVRDSGIGMRPDVVARLFSSFFQGDSSTTRQYGGTGLGLTISKRLTELMGGGIGVESS
                     QGEGSTFWFTLRLKVRDHQAPLRPLSGEALLMGLPPAATRLIQEQLRAWGLEPRIMPE
                     GADTAAWLRAARSPGALALAGSGSLEGALAAAEGCTLALASPLYQPELREAAAQQGVK
                     AFLTLPARPSHLRALLETGSSAARLPARAMPAGTQVAPVDVRVLLAEDNLINQKVALT
                     MLRRFGIQADVAATGGEALDALVGVSYDLVLMDCQMPGMDGFEATRRIRERERGTRRL
                     PVVAMTANAMVGDRERCLEAGMDDHIPKPVRVADLHRALARWLPAGSVPPVADAATLT
                     GES"
BASE COUNT          397 a          977 c         1024 g          446 t
ORIGIN      
        1 gccggaagcc acgggaggcg ccgggcccgg acccttcatg gggcatctgg acccggcgcc
       61 tcccgtgtgc ccatgctctg tgtctccgtg gtggatcctt taccgttgaa ggcgaatcgg
      121 cgtcaggcgc cttcgaacag cttcagcgtg tcgtccagct tccggaggat ggccaggatg
      181 cggaagggct ccatggccag gtagtccacg gccccggcgg acacggcccg gtggcgcttc
      241 atggcctcgt cctcctcggt gccggcgagg atcacgggca cggggcagcc ctcctgggac
      301 accacctggc ggcagagctc cagggggctg gccaggcgga gctggttgtg gatgagcacc
      361 atgcgggtgc gtccccagcc gtccgcgccg tctccgatgg gccccagctg ggcctgcacc
      421 ggccccttga tgtggtccag gacggccagg ccgaacttgc ggctgagggc ctcggccagc
      481 cgccgggcga agtcctcctt ctccgtgagc agcagcagca tgggatcgcg gtccaccagc
      541 accttcaccg tgggcagcgc cgcggcgcgg ttgatccggg ccgtggcctc gtggaagccg
      601 cggggcgaga aatcgtccgt gtcctgctgg gcctggagcg cctgctgatc ctggatccac
      661 tcccggtact ggcccagcat gcccgcgtcg gcctgccggg tgaaccggag gcccaccagg
      721 ttctcgccga agtaggccac ggtggtcggg gcccgaaggc ggaaagtgtc ggtgaggggg
      781 acatccagca gggactcctc ccccatgcgc agcagctcgc ggatgtcgtg cttggtgttc
      841 ctcaggacga gctccaggcc ctcctcgccg aagctctgca cctgcccgtc gatcagggcg
      901 ttccgggtgt tggtgaaggt cgccgcatac ggcttgaagt gggactggtc gggaatgaaa
      961 tccgccagcc ggtgcatgtc cgaccggcgc agggtgcgcg gaacggtggc caggcaggcc
     1021 tccacgcctt ccaggacctc ctgtccggag caggccacca cgcattcgta ctccaggccc
     1081 cggtccttca gcttgagggc caggttttcc ccgggcttca ggccccaggc ggccatgtca
     1141 tcgaagggca tgcggaaggc cagccgttcg ccgtcctcgg tgaggatggg gtaggcggcc
     1201 cgctgggcct tgtaggccac gtccaggcgc gccccggcca ggcagaggcg ctgcagggcc
     1261 atgcggatgg tggtgtcgtc ttccaggagg gcagcggctc gggccatgtc aggattcacc
     1321 ggtcagggtg gctgcgtcag ccacgggggg cacggagccc gcggggagcc agcgggcgag
     1381 ggcgcggtgc aggtcggcca cgcgcacggg cttggggatg tggtcgtcca tgcccgcctc
     1441 caggcagcgt tcccggtcgc cgaccatggc gttggcggtc atggccacca cggggaggcg
     1501 gcgggtgccc cgttcgcgtt cgcggatgcg gcgcgtcgcc tcgaaaccat ccatccccgg
     1561 catctggcag tccatgagca ccaggtcgta ggagacgccg acgagggcgt ccagggcctc
     1621 gccgcccgtg gccgccacgt ccgcctggat gccgaaccgc cgcagcatgg tgagcgccac
     1681 cttctggttg atgaggttgt cctcggccag gagcacgcgc acatccaccg gcgccacctg
     1741 ggttcccgcc ggcatcgccc gggcgggaag gcgggccgcc gaggatccgg tttccagcag
     1801 agcccgcagg tggctcggcc gcgccggcag ggtgaggaag gccttgaccc cctgctgcgc
     1861 ggcagcctcc cgcagttcgg gctggtacaa ggggctggcc agggccaggg tgcagccctc
     1921 cgctgcggcg agcgccccct ccaggctgcc ggacccggcg agcgccagcg ccccggggct
     1981 gcgggccgcc cgcagccagg cggcggtatc ggcgccttcc ggcatgatcc tgggttccag
     2041 gccccaggcc cggagctgct cctggatgag ccgggtcgcg gcgggcggca gtcccatgag
     2101 cagggcttcg cccgaaaggg gccgcagcgg cgcctggtgg tcccggacct tgaggcgcag
     2161 cgtgaaccag aaggtgctgc cctctccctg cgagctttcc acgccgatgc ccccgcccat
     2221 caattccgtg agccgcttgc tgatggtgag gcccagcccg gtgccgccgt attgccgggt
     2281 ggtggagctg tccccctgga agaacgagct gaagaggcgg gccaccacat ccgggcgcat
     2341 gccgatgccc gagtcccgga cctccacttt cagcaggacc tggcccgcct cctgggcctg
     2401 gggccgcacc cgcacctcga ccgccccctc gtgggtgaat ttcaaggcat tgtccatgag
     2461 gttggtgagg atctggcgga accgggtggg atcgccggcc accgccaggg gcgtggcggg
     2521 atccacgaag acgcccagct ccacgccctt ggcctgggcc ttgacgccca ggaccgccgt
     2581 cacgtcctcc agcaccgtga gcagatcgaa atccagggat tccagctcga gcttccccgc
     2641 ctcgatcttg gagaagtcga ggatgtcgtt gatgagggtg agcagggact cgccgcagga
     2701 gcggacggtc tcggcgtact ggcgctgctc tgcctccatg ggcgtctcca gcagcagccc
     2761 cgtcatcccg atgatgccgt tcatgggcgt gcggatctca tggctcatgt tggccaggaa
     2821 ttcgcttttg aggcccgaca gctc
//
LOCUS       DASUDT010000226         4623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1115304, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000226 DASUDT010000000
VERSION     DASUDT010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1115304"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..907)
                     /gene="trmD"
                     /locus_tag="VFV26_04670"
     CDS             complement(107..907)
                     /gene="trmD"
                     /locus_tag="VFV26_04670"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX4845489.1"
                     /translation="MRFDALTLFPEYFEAARLGITGRAFRDLGHGLHTHSYRPFAGNA
                     FGHVDDAPFGGGPGMVLRPDVLRDTLASVPREGAGRVIHFNPAAPPLTHAKVRELARL
                     DQLILVCTRYEGLDQRAVDCFVDEELSVGEAVLSGGELPALFLMDAVCRWLPGVLGNE
                     ASAEQDSFATGLLDHPHFTRPADFEGREAPAVLQGGDHGAIRLWRLREAMARTRRLRP
                     DLWAIYLRDRLQGLDRPAQWCAWQVEHPADWERPKPKGWKGWRPQSEV"
     gene            complement(904..1494)
                     /locus_tag="VFV26_04675"
     CDS             complement(904..1494)
                     /locus_tag="VFV26_04675"
                     /inference="COORDINATES: protein motif:HMM:NF017833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HEX4845490.1"
                     /translation="MPGAPLSLFRLLDQLLEQDGTVSVRELLDQAGEQTYGLALLILA
                     LLTFIPGVANLLSLGTLALGLQFWWGRSHLWLPEPLQRFEMQRGRVKELLAQVEARIA
                     WLGIRTAPRKAPGRRTLGFLVSWTALLAALPVPLPFANILPAIALVLLGVALLEEWPL
                     LAWLGAGFSLLTTLYFALSARLVLETLKAAFRMGLT"
     gene            complement(1529..2614)
                     /gene="rlmN"
                     /locus_tag="VFV26_04680"
     CDS             complement(1529..2614)
                     /gene="rlmN"
                     /locus_tag="VFV26_04680"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX4845491.1"
                     /translation="MAQLWDRPAPEAGRAPRPNAAGLDGPGLKALMASLGEPAWRGGQ
                     LFDGLYRQRWSRWDQFSSLPKALRSRLEADVDLAWPVIVQSQCSSDGSTKHVFELADG
                     RQVEGVFMPYADRITLCLSSQVGCAMGCTFCATGQMGIIRNLTAAEITGQVVAMLNHH
                     DHPPERPVNLVFMGMGEPLHNLDHLMAAFGVLADPKGLAIPPRRVTVSTSGLVSGIER
                     LGAFARRPRLALSLNATTDARRSEIMPVNRVWNLEALAGALAAFPLQSGERITLEYVL
                     LKGATDSLEDGRRLAAFARRFPAKVNLIPFNPHEGSGFEPPDESRLSALCRLLSDAGL
                     PVSVRRSRGQDVAGACGQLVRDGRRGS"
     gene            complement(2617..2880)
                     /locus_tag="VFV26_04685"
     CDS             complement(2617..2880)
                     /locus_tag="VFV26_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845492.1"
                     /translation="MELPDHLHHLVSELGDSLVKALAEDDHCRELTFQIQAQGYGLVL
                     ILEAAPIRLRGGDPGDALPQEGPEQPFSDDDKRLMKSFKIRMD"
     gene            complement(2958..3515)
                     /locus_tag="VFV26_04690"
     CDS             complement(2958..3515)
                     /locus_tag="VFV26_04690"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX4845493.1"
                     /translation="MILLAITPGAGFDRHRWAEVLHSGVDAFLIRENQLGTRTLLEAA
                     AWCQDTAPHVALWVAGRLDVALAAGCGLHAPEAYPEVPPDLVSLSRPLHVETQWEARK
                     GCGQLLVSPVFDSPGKGEPWGAARLHRFLDSQPPAGPRLLALGGLEPANAGLLRHPRL
                     AGLAAIRPFWMGDPRRAVAAFRTAE"
     gene            complement(3543..4472)
                     /gene="bamD"
                     /locus_tag="VFV26_04695"
     CDS             complement(3543..4472)
                     /gene="bamD"
                     /locus_tag="VFV26_04695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX4845494.1"
                     /translation="MKRILTALSLSLLIAGLGLGCRKPKTAEKTVRSTELLATADKQM
                     KQGKFAEARQTLRHLEQYLPGSPEFPKAKLMLGDSFFFQPTASFAEAEVEYASFLNYF
                     PRHELRDYALYHRALCHFSAIESAERDQAETRKALNGFQQLLAESPGSPYAGEARAKV
                     LQCWRRIAEHELVVGIFYVNVYYYPGAERRLKALLETYPDYVDRERAYYYLGEAMRQR
                     LFTAEEVGQYEKDYAAKLQKPDLKDLTKEQGAQYGKDFNAFTSERIKGFRDEARSYYQ
                     KLVESYPGSEWARRAADRLVTMGTSGVKEELDS"
BASE COUNT          727 a         1500 c         1688 g          708 t
ORIGIN      
        1 gataaatagg tattgaaaaa caattcattc aatcggaaag aaacggcaca tatttgccga
       61 atcttgtcat tggatagtgt tgcagaatgt gcccatctgt ggcgatttac acctcacttt
      121 gaggccgcca ccccttccat cccttgggtt tgggccgctc ccagtccgct ggatgttcca
      181 cctgccaggc gcaccactgg gcgggacggt ccagaccctg caggcggtcg cggaggtaga
      241 tggcccatag gtcgggccgc aggcgcctgg tgcgggccat ggcctcccgc aggcgccaca
      301 accggatggc gccgtggtcg ccgccctgca ggacggcggg cgcttcccga ccctcaaaat
      361 cggcgggccg ggtgaagtgg gggtggtcca gcaggccggt ggcaaagctg tcctgctcgg
      421 cggaagcttc gttgcccagg acgccgggca gccagcggca gacggcgtcc atgaggaaca
      481 gggccggcag ttcgccgccg ctgagaaccg cctcgcccac gctgagctct tcgtccacga
      541 agcagtccac ggcccgctgg tccaggccct cgtagcgggt gcagaccagg atgagctggt
      601 ccaggcgggc cagctcccgc accttcgcat gggtcagggg cggggcggcg gggttgaagt
      661 ggatgacgcg gcccgcgcct tcccggggga cggaggccag ggtgtcgcga agcacgtcgg
      721 gccgcagcac catgccgggg ccgccgccga agggggcatc gtccacatgc ccgaaggcgt
      781 tgcccgcgaa gggccggtag ctgtgggtgt ggagcccgtg gcccaggtcc cggaaggccc
      841 ggccggtgat gcccaggcgg gcggcctcga agtactcggg gaagagcgtg agggcgtcga
      901 acctcatgtc agccccatgc ggaaggccgc cttgagggtc tccaggacga gcctggcgga
      961 cagggcgaag tagagggtgg tgagcaggct gaagccggct cccagccagg cgagcagcgg
     1021 ccactcctcc aggagggcga cgccgaggag caccagggcg atggcgggga ggatgttcgc
     1081 gaagggcagg ggcacgggca gggctgccag gagggcggtc cagctcacca ggaagccgag
     1141 ggtccggcgc ccgggcgcct tgcggggggc cgtccggatt ccgagccacg cgatgcgggc
     1201 ctccacctgg gccagcagct ccttgacccg tccccgctgc atctcgaacc gctgcagggg
     1261 ctccggcagc cagaggtggc tgcgccccca ccagaactgc aggcccaggg ccagggttcc
     1321 gaggctcagc aggttggcca cgcccgggat gaacgtgagg agggccagga tcagcagggc
     1381 gagtccgtag gtctgctcgc cggcctggtc caggagctcc cgcacggaga cggtgccgtc
     1441 ctgctccagg agctggtcca ggaggcggaa caaggagagg ggcgcgccgg gcatggcttc
     1501 aggatgccgc aaagccggaa gcccgggttc aggaacctcg gcggccgtcc ctcaccagct
     1561 ggccgcaggc tccggccacg tcctggcccc ggctgcggcg gacgctgacg ggcaggcccg
     1621 catcggacag caggcggcag agggcgctga ggcgggattc gtccggcggt tcgaacccgc
     1681 tgccttcgtg gggattgaag gggatcaggt tcaccttggc ggggaagcgg cgggcgaagg
     1741 cggcgaggcg gcggccgtcc tccaggctgt cggtggcccc cttcagcagc acgtactcga
     1801 gcgtgatgcg ctccccggac tggaggggaa aggcggccag cgccccggcc agggcctcca
     1861 ggttccatac ccggttcacg ggcatgatct ccgagcgccg ggcgtccgtg gtggcgttga
     1921 ggctcagggc cagacggggc cgccgggcga acgcgcccag acgctcgatg ccgctcacca
     1981 ggcctgaggt ggatacggtg acgcgccggg gggggatggc caggcccttg ggatccgcca
     2041 ggacgccgaa ggcggccatc aggtggtcga ggttgtgcag gggttccccc atgcccatga
     2101 acaccaggtt gaccgggcgc tccgggggat ggtcgtggtg gttcagcatg gccaccacct
     2161 ggccggtgat ctcggcggcg gtgaggttgc ggatgatccc catctgcccg gtggcgcaga
     2221 aggtgcagcc catggcgcag cccacctggc tggacaggca gagcgtgatc cggtcggcgt
     2281 agggcatgaa cacaccctcc acctgcctcc catcggccag ttcgaagaca tgcttggtgg
     2341 atccgtcgct ggagcactgg ctttggacaa tgactggcca tgccagatcc acgtccgctt
     2401 ccaggcggct ccgcagggcc ttcggcaggc tggagaactg gtcccagcgg ctccaccgct
     2461 gccggtagag gccgtcgaag agctggccgc cgcgccaggc gggctcgccg agggaggcca
     2521 tgagggcctt caggccgggg ccgtccaggc ctgcggcatt gggccgcggc gcgcggccgg
     2581 cttccggggc cggccggtcc cacagctggg ccatcctcaa tccatccgga tcttgaagga
     2641 cttcatcagg cgcttgtcgt catcggagaa cggctgctcg ggcccctcct gcggcagggc
     2701 atcgccggga tccccgccgc ggagccggat gggcgccgct tccaggatga gcaccaaccc
     2761 gtagccctgg gcctggatct ggaaggtgag ctcccggcag tggtcgtcct ccgccagggc
     2821 cttgaccagc gaatccccca gctcgctcac caggtgatgc aggtggtctg gcaattccat
     2881 ggggcctccg gtcccaagga taccagcggc ctgcgagcct tctccctcaa gcccccgaag
     2941 caggtggaag gatgcgccta ttcagcggtg cggaaggcgg ccacggcacg gcggggatcc
     3001 cccatccaga aggggcggat ggcggccagg cctgccaggc gcgggtggcg gagcaggccc
     3061 gcgttcgcgg gctccaggcc gcccagggcc agcaggcgtg gacccgccgg gggctggctg
     3121 tccaggaaac gatggagccg ggctgccccc caaggttcgc ctttcccggg actgtcgaaa
     3181 acgggcgaca ccagaagctg gccgcagccc ttccgggcct cccactgggt ttcgacatgc
     3241 aggggccgcg aaagggaaac cagatccggc ggcacctcgg gataggcctc tggcgcatgc
     3301 aggccgcagc ccgcggctag ggccacgtcc agacgcccgg ccacccagag agccacgtgt
     3361 ggcgccgtgt cctggcacca ggcggcagcc tccagcaggg tccgggttcc cagctggttc
     3421 tcccggatca ggaaagcatc cacgccggaa tgcagcacct ccgcccaccg gtggcggtca
     3481 aaaccggcgc ccggggtgat ggccagaagg atcatcggag gcctcggcag ggggggctgg
     3541 gcctagctgt ccagctcttc cttcacgccg ctggtgccca tggtcaccag ccggtccgca
     3601 gcccggcggg cccattcgga gccgggatag ctttccacca gcttctggta gtagctcctg
     3661 gcctcgtccc ggaagccctt gatgcgctcc gaggtgaagg cgttgaaatc cttcccgtac
     3721 tgggcccctt gttctttggt gaggtccttc agatcgggtt tctggagctt ggcggcgtag
     3781 tccttttcgt actgcccgac ctcttcggcc gtgaagagcc gctggcgcat ggcctcgccc
     3841 aggtagtagt aggcgcgctc gcgatccacg taatccggat aggtttccag cagggccttc
     3901 aggcgccgtt ccgcgcccgg gtagtagtag acgttcacat agaagatgcc caccaccagc
     3961 tcgtgttcgg cgatgcgccg ccagcactgc agcaccttgg ccctggcctc gccggcatag
     4021 ggactgccgg gggattccgc cagcagctgc tggaacccgt tcagcgcctt gcgggtttcc
     4081 gcctggtcgc gctcggcgct ttcgatggcg gagaagtggc agagggcccg gtggtacagg
     4141 gcgtagtccc ggagctcatg gcgggggaag tagttcagga agctcgcgta ctctacctcg
     4201 gcctcggcga agctggcggt cggctggaag aagaagctgt cgcccagcat gagcttggcc
     4261 ttggggaact cgggcgaccc cggcaggtac tgttccaggt gccggagggt ctgccgggcc
     4321 tcggcgaatt tgccctgttt catctgcttg tccgcggtgg ccagcagctc ggtggaacgg
     4381 accgtcttct ctgcggtctt cggtttgcgg cagcccaacc ccagccccgc gatcaggagg
     4441 ctcagggaaa gggcggtgag gatgcgcttc atgcggactc cggagacagc acttcagaca
     4501 tggcgggatg gtgcgaaggg ttccaggggc gggaggaagg gttccaggcc tggcggagtc
     4561 tctcgagcca gggttctgcc agggcctggg cctcgtaccg ctgccggtca tggaagacct
     4621 cgt
//
LOCUS       DASUDT010000227         2463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2043553, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000227 DASUDT010000000
VERSION     DASUDT010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2043553"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..1172)
                     /locus_tag="VFV26_04700"
     CDS             complement(96..1172)
                     /locus_tag="VFV26_04700"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4845495.1"
                     /translation="MSGSGTTRRDLFKLGAATAAGLIATRLGAAEGAEPVALARPVPK
                     APFNPATATAMPTRNLGRTGLHVGLFSLGGQAAIEKANNEAVAVPLIERALDLGVNYV
                     DTSARYGGEARWSEQYFGQVMKRRRREAFLATKTHDRTADGSLRILETSLKLLQTDHV
                     DLWQLHAMSTMDDVEKVCAKGGALEAFQKARDQKLVRFLGLSGHTDPDVLAEAIRRVP
                     FDCVLMAFNAADTWHLPFKKTLLPLAIEKEMGIIGMKIPARGRILEGVQPPPPAQQRG
                     TAKHDRPGTLTIKEAMRYTLSHPVSTVIIGVDNVAQLEENVRIARDFLPLNAAQLEAL
                     EQKVKPVYGQASWYKRDAPANPPK"
     gene            complement(1198..1614)
                     /locus_tag="VFV26_04705"
     CDS             complement(1198..1614)
                     /locus_tag="VFV26_04705"
                     /inference="COORDINATES: protein motif:HMM:NF016874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside 2-deoxyribosyltransferase"
                     /protein_id="HEX4845496.1"
                     /translation="MDLYFSCSLTGGRQDQPVYAAMVAHLQALGHEVLTAHLAAESVM
                     AADGELSPEAVFDRDTAWLRSCDAVIAEVSTPSHGVGFEIAYALERGKPVLCLAREGV
                     RVSKMLTGIRQPDFAVQTYGGAAEALVHLEAFLARY"
     gene            complement(1711..>2463)
                     /locus_tag="VFV26_04710"
     CDS             complement(1711..>2463)
                     /locus_tag="VFV26_04710"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEX4845497.1"
                     /translation="ELGAEHPFVKAMLGGQTPEAVAKAAVEGTRLDDPAVRKQLAEGG
                     KAALEASADPMILLAKKLDPFNRAIRKQVEDEVTSVFTEHGGRIAEARFKAFGKSLYP
                     DATFTLRLGYGPVATYANGTGTKAQPFTTYMGMYDRHLGWGGNAAAAEEGAWTLPERW
                     LKRQGKLDLATPFNFIYACDTVGGNSGSPVVNVKGEFVGINFDSVYEGQGGYYVYDAE
                     TKRAVATDARAILEALRKIMDARHLADEVLGK"
BASE COUNT          341 a          816 c          867 g          439 t
ORIGIN      
        1 atgcttaaaa gcatcttcac tccgaaccgc cgccctgtcc accgcccacc gggtacagaa
       61 atccacccgc tttcatccgt ggctgattcg tcttttcact tcggcggatt ggccggcgcg
      121 tcccgcttgt accaggacgc ctggccgtag acgggcttca ccttctgttc cagcgcctcc
      181 agctgcgcgg cgttcagggg aaggaagtcg cgggcgatgc ggacgttctc ctccagctgg
      241 gccacgttgt ccacgccgat gatgacggtg ctcacggggt ggctcagggt gtagcgcatg
      301 gcctccttga tggtgagggt gccggggcgg tcgtgcttgg cggtcccgcg ctgctgggcc
      361 gggggcggcg gctggacccc ttcgaggatg cggccccggg cggggatctt catgccgatg
      421 atgcccatct ccttttcgat ggccaggggc aggagcgtct tcttgaaggg caggtgccag
      481 gtgtcggcgg cgttgaaggc catgagcacg cagtcgaagg ggacgcggcg gatggcctcg
      541 gccagcacgt caggatccgt gtgcccgctg agtcccagga agcgcacgag cttctggtcg
      601 cgggccttct ggaaggcctc gagggccccg cccttggcgc agaccttctc cacatcgtcc
      661 atggtgctca tggcgtgcag ctgccagagg tccacgtggt cggtctggag cagcttcagc
      721 gaggtctcca ggatgcgcag ggagccgtcc gccgtgcggt cgtgggtctt ggtggcgagg
      781 aaggcctccc tgcgccgccg cttcatgacc tgcccgaagt actgctcgct ccagcgggcc
      841 tcgccgccgt agcgggcgga ggtgtccacg tagttcacgc cgagatccag ggcccgctcg
      901 atgaggggca cggccacggc ctcgttgttc gccttctcga tggccgcctg gccccccagg
      961 ctgaagagcc ccacgtggag cccggtgcgc cccaggttgc gggtgggcat ggcggtggcg
     1021 gtggccgggt tgaagggggc cttcgggacc gggcgcgcca gcgccacggg ttccgcgccc
     1081 tccgcggcgc ccagccgcgt ggcgatgagg cctgcggccg tggccgctcc cagcttgaac
     1141 aggtcgcgtc gggtggtgcc ggaaccggac atggcgtcct ccgaagtgaa gcgcccccta
     1201 gtatcgcgcc aggaaggctt ccaggtgcac caacgcttcg gcggcccccc cataggtctg
     1261 gacggcgaaa tccggctgcc ggatgcccgt gagcatcttg ctgacgcgga cgccctcccg
     1321 ggccaggcag agcacgggct tgccccgctc cagggcgtag gcgatctcga agcccacgcc
     1381 gtgggagggc gtgctcacct cggcgatgac cgcgtcgcag ctccgcagcc aggcggtgtc
     1441 ccggtcgaag acggcctcag gggacagctc cccgtcggcg gccatcaccg attcagcggc
     1501 cagatgggcc gtcagcacct cgtggcccag ggcctggagg tgcgccacca tggccgcgta
     1561 gaccggctgg tcctggcggc cgccagtcag ggagcaggag aagtagaggt ccacgggatc
     1621 ctcagaaaga cgttctagtc cacagattcc acagattcac acagatttcc tttgaatttg
     1681 aatctgtgga atctgtggat ccaatccttt tcatttcccc agcacttcgt ccgcgaggtg
     1741 cctggcatcc atgatcttcc gcagggcttc gaggatggcg cgggcgtccg tggccacggc
     1801 gcgcttggtc tcggcgtcgt agacgtagta gccgccctgc ccttcgtaga cgctgtcgaa
     1861 gttgatgccc acgaactcgc ccttcacgtt caccacgggg ctgccgctgt tgccgcccac
     1921 ggtgtcgcag gcgtagatga agttgaaggg ggtggccagg tccagcttgc cctggcgctt
     1981 gagccagcgc tcgggcaggg tccaggcgcc ctcctccgcc gcggcggcgt tgccgcccca
     2041 gcccaggtgc cggtcgtaca tccccatgta ggtggtgaag ggctgggcct tggtgccggt
     2101 gccgttggcg taggtggcca cggggccgta gcccaggcgc agggtgaagg tggcgtcggg
     2161 atagagcgac ttgccgaagg ccttgaagcg ggcctcggcg atgcggcccc cgtgctcggt
     2221 gaacacgctg gtgacctcgt cctccacctg cttgcggatg gcccggttga agggatcgag
     2281 cttcttcgcg aggaggatca tgggatcggc gctggcctcg agcgcggcct tgccgccttc
     2341 cgccagctgc ttccgcacgg cggggtcatc cagccgggtg ccctccacgg cggccttggc
     2401 cacggcctcc ggggtctggc cgcccagcat ggctttcacg aagggatgct ccgcgcccag
     2461 ctc
//
LOCUS       DASUDT010000228         4092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_805934, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000228 DASUDT010000000
VERSION     DASUDT010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4092
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805934"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VFV26_04715"
     CDS             <1..532
                     /locus_tag="VFV26_04715"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEX4845498.1"
                     /translation="PATATPPVPPVAPPMAPKRTAPARPAEQSFLGSLLPSIPDDAVF
                     TGERGDLATRLLAALIDFVPAIAIYIAFMFLSAVPILGCILLPLHIVAQLGYYWFFVP
                     WCVSKYGASIGKKIMKLRVVPEGNIQGRVELGPAILRQIGNILALNLIVLAVKGDERL
                     SLSDMLAKTEVLKVDR"
     gene            535..1062
                     /gene="dcd"
                     /locus_tag="VFV26_04720"
     CDS             535..1062
                     /gene="dcd"
                     /locus_tag="VFV26_04720"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR02274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEX4845499.1"
                     /translation="MILTGKQILQARAQGRLRIDPWDESQLNPNSYNLRLAEDLATYT
                     EPELDMARPNGIAFLKIPAEGLLLKPGTLYLGRTLEYTETHGMVPMLEGRSSVGRLGL
                     FVHVTAGFGDIGFCGFWTLEISCIQPVRIYAGVGICQIFYHTIDGEYDSYESGKYQRN
                     SGIQPSMLWKDFVKE"
     gene            complement(1063..1389)
                     /locus_tag="VFV26_04725"
     CDS             complement(1063..1389)
                     /locus_tag="VFV26_04725"
                     /inference="COORDINATES: protein motif:HMM:NF022281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2752 domain-containing protein"
                     /protein_id="HEX4845500.1"
                     /translation="MLAGVLLERWGAPAQETCLLHRLTGHPCPTCGSTREVLGFVQGQ
                     WMQAFRMNPFVAFGLVAGGLWLGLRLALGRRLRIELSTGEQRTALALGLALLLANWIW
                     VLRTQS"
     gene            complement(1487..1777)
                     /locus_tag="VFV26_04730"
     CDS             complement(1487..1777)
                     /locus_tag="VFV26_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845501.1"
                     /translation="MNDYASATPVKAHRGTMILIFGILGVICCVIFAILAWVMGGNDL
                     KAMAAGQMDPSGEGLTKAGKILGIIGCVLGILSILWIVFFGGLAAFSALGAH"
     gene            complement(1875..3500)
                     /locus_tag="VFV26_04735"
     CDS             complement(1875..3500)
                     /locus_tag="VFV26_04735"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4845502.1"
                     /translation="MKLTLQVDGALHPVTLTEEGVTIGRGDQASIRIQANAVSRVHAR
                     IFLKDGQPHVMDMKSLNGTSLNGVALSEPAPFHPGDTVLLGEAMVVWVPDSAGMGETS
                     GLNLLLAPKAGTSRISLEDRAFDASGSILLPHASLEAMLAQASGQHPAGEAVTLFQRL
                     ASMAGTLLRAAGLTELLESVMGLVTSQIPCQRGFILLADAEGELVPELVWEEQPGQNP
                     NPISRTIARTAMKDRVAILTTDARMDPRFSAGESIKIHGITSALCAPLIVENQSLGVI
                     YLETSLAKGSFKREDEHLLSAMANFAAVGIQREREAKFRQRLERYHSPAVVDQILKSS
                     QNKEAPALQAQRCQISVLFADISGFTRMSEGMEPMVLAGILNRTFEAMTDQIFSRGGT
                     LDKYIGDAIMAFFGAPNPDPDHARHAVAAASAMQETLRSLNAARPAGYPELKMRIGIN
                     SGEAFVGDIGCEKRMDYTVMGSTVNLASRLESGVAKPGQIVIGPRTAELVGQDQLRQL
                     EGFTLKGIEQEVRPFEVLWVSEGTATLPDLGEY"
     gene            3602..>4092
                     /locus_tag="VFV26_04740"
     CDS             3602..>4092
                     /locus_tag="VFV26_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEX4845503.1"
                     /translation="MTKVGFMSLGCPKNLVDSEVMLGHLRLKGYQITPVLEEAQVLVV
                     NTCGFIDAAKQESVEAILQAASMKKEGACEKLIVAGCLVERYRDELMAEMPEIDACLG
                     TRDIEQIAEIIGAGASFELNPNPDYLYTEASPRMLTTPRASAYLKISEGCDHACAFCV
                     IPQL"
BASE COUNT          676 a         1401 c         1339 g          676 t
ORIGIN      
        1 cccggccacc gccaccccgc cggtcccccc cgtggcgccg cccatggccc cgaagcgcac
       61 cgcccccgcc cggcctgcag agcagtcctt cctgggttcc ctcctgcctt ccatccccga
      121 tgacgccgtg ttcacgggcg aacgggggga tctggccacg cgcctgctgg cggctctcat
      181 cgatttcgtg cccgccatcg ccatctacat cgccttcatg ttcctgtccg cggtgcccat
      241 cctgggctgc atcctgctgc cgctccacat cgtcgcccag cttggctact actggttctt
      301 cgtgccctgg tgcgtgtcga agtacggggc cagcatcggc aagaagatca tgaagctgcg
      361 ggtggtgccc gagggcaaca ttcagggacg cgtcgagcta gggcccgcga tcctccggca
      421 gatcggcaac atcctcgccc tgaacctcat cgtcctggcc gtcaagggcg acgaacgcct
      481 cagcctcagc gacatgctgg cgaagactga agtgctgaaa gtggaccgct gacggtgatc
      541 ctcaccggca agcagatcct ccaggcccgt gcgcagggcc gcctccgcat cgacccctgg
      601 gatgaatccc agctgaatcc caacagctac aacctgcgcc tggccgagga tctggccacc
      661 tacaccgagc ccgagctcga catggccagg cccaatggca tcgcgttcct gaagatcccc
      721 gccgagggcc tgctcctgaa gcccggaacc ctctacctgg gacgcacgct ggaatacacc
      781 gagacccacg gcatggtgcc catgctggag ggccgcagca gcgtgggccg cctggggctc
      841 ttcgtccacg tcacggcggg cttcggcgac atcggtttct gcgggttctg gaccctggag
      901 atcagctgca tccagcccgt ccgcatctac gccggcgtgg gcatctgcca gatcttctac
      961 cacaccatcg acggcgagta cgacagctac gaatccggca agtaccagcg gaattccggc
     1021 atccagccgt ccatgctgtg gaaggacttc gtcaaggaat gatcaggact gggtccggag
     1081 cacccagatc cagttcgcca gcagcagggc gaggcccaag gccagggctg tgcgctgttc
     1141 cccggttgat aactcgatcc ggagcctccg gcccagcgcc aacctcagcc ccagccacaa
     1201 gccccccgcc acaaggccga aggccacgaa ggggttcatc cggaaggcct gcatccattg
     1261 gccctggacg aagcccagca cctcgcgggt gctgccgcag gtcgggcagg ggtggcctgt
     1321 caggcggtgc agcaggcagg tctcctgcgc aggcgcaccc caccgttcca gcaggacgcc
     1381 cgccagcacc agaagggccc atgcgccgac gaccccggct gcccaggctg gaggccgggg
     1441 cagccggggg gctctttccc aatggacctt caccgctcca gtcggatcag tgggcgccca
     1501 gggcgctgaa cgccgcgagt ccgccgaaga agacgatcca aaggatggac aggatgccca
     1561 gcacgcatcc gatgattccg aggatcttcc cggccttggt cagcccttcg ccgctggggt
     1621 ccatctggcc ggcagccatg gccttcagat cattgccgcc catgacccac gccaggatgg
     1681 cgaagatgac gcaacagatg acgccgagga tgccgaagat gaggatcatc gtgccccgat
     1741 gggccttcac gggggtggcg gacgcgtagt cgttcattgg gggctccatg gagcggttca
     1801 ggccgggctc ggcccggaat ggttgaggtt gggccaagtg taggaggccc tcggctgctt
     1861 ggataggggg tccgtcagta ctcgccgaga tccggcaggg tcgcagtgcc ttcgctcacc
     1921 cacagcacct cgaagggccg gacctcctgc tcgatgccct tgagcgtgaa cccctccagc
     1981 tgccgcagct ggtcctggcc cacgagctcg gccgtgcggg ggccgatgac gatctggccg
     2041 ggcttggcga cgccgctctc caggcgcgag gccagattca cggtgctgcc catcacggtg
     2101 tagtccatgc gcttttcgca gccgatgtcg cccacgaagg cttcgccgct gttgatgccg
     2161 atccgcatct tcagctcggg atagcctgcg ggccgggcgg cgttcaggct gcgcagcgtc
     2221 tcctgcatgg ccgaggcggc cgccacggcg tgccgggcat gatcgggatc aggattcggg
     2281 gcgccgaaaa aggccatgat ggcgtcgccg atgtacttgt ccagtgtgcc gccgcggctg
     2341 aagatctggt ccgtcatggc ctcgaaggtg cggttcagga tgccggccag caccatgggc
     2401 tccatgcctt cgctcatgcg ggtgaacccg gagatgtcgg cgaagagcac gctgatctgg
     2461 cagcgctggg cctggagggc cggcgcctcc ttgttctggc tggacttcag gatctggtcc
     2521 accaccgcgg ggctgtggta gcgctccagc cgctggcgga acttggcttc ccgctcgcgc
     2581 tggatgccca cggcggcgaa gttggccatg gcgctgagca ggtgctcgtc ctcgcgcttg
     2641 aagctgccct tggcgaggct ggtctccaga tagatcacgc ccagggactg gttctccacg
     2701 atgagcgggg cgcacagggc cgaagtgatg ccgtggatct tgatgctctc ccccgcgctg
     2761 aaccggggat ccatgcgggc atccgtggtg aggatggcca cgcggtcctt catggccgtg
     2821 cgggcgatgg tgcggctgat gggattggga ttctggcccg gctgctcctc ccagaccagc
     2881 tcgggcacca gctcgccctc cgcgtccgcc agcaggatga acccgcgctg gcaggggatc
     2941 tgcgacgtca ccaggcccat caccgattcc agcagctccg tcaggcccgc cgcccgcagc
     3001 agggtgcccg ccatgctggc caggcgctgg aacagggtca ccgcctcgcc cgcgggatgc
     3061 tggccgctgg cctgggccag catggcctcc aggctggcat ggggcagcag gatggagccg
     3121 gaggcgtcga aggcccggtc ctccagggag atcctggagg tgcccgcctt gggtgccagc
     3181 agcaggttca gccccgaggt ctcgcccatg ccggcgctgt cgggaaccca caccaccatg
     3241 gcctcgccca gcagcaccgt gtcgccaggg tggaagggcg cgggctcgga cagggccacg
     3301 ccattcaatg acgtcccgtt gagggacttc atgtccatca cgtggggctg gccgtccttc
     3361 aggaagatcc gggcatggac ccggctcacg gcattggcct ggatgcggat gctggcctga
     3421 tcgccccggc cgatggtcac gccctcctcc gtgagggtca cgggatgcag agcgccatca
     3481 acctggaggg tgagcttcat gggccagtcc gaagggggca ttgagcttat catgcgctgc
     3541 tgacggtatc ggcggcccgt tgtaatctat ggggttcacc tcgaacgggt gtggagatcc
     3601 attgaccaaa gtcggtttca tgtccctggg ctgccccaag aacctggtgg attcggaagt
     3661 catgctgggc cacctgcgcc tcaagggcta ccagatcacc cccgtgctgg aggaggccca
     3721 ggtgctcgtg gtgaacacct gcggcttcat cgacgccgcc aagcaggaga gcgtcgaggc
     3781 catcctccag gccgcctcca tgaagaagga gggggcctgc gagaagctca tcgtggcggg
     3841 ctgcctggtg gaacgctacc gggacgagct catggccgag atgccggaga tcgacgcctg
     3901 cctgggcacc cgggacatcg agcagatcgc cgagatcatc ggcgccggcg cgtccttcga
     3961 gctgaatccc aaccccgact acctctacac cgaagccagc ccccgcatgc tcaccacccc
     4021 cagggccagc gcctacctga agatcagcga aggctgcgac cacgcctgcg ccttctgcgt
     4081 gatcccccag ct
//
LOCUS       DASUDT010000229         3333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1159655, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000229 DASUDT010000000
VERSION     DASUDT010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159655"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VFV26_04745"
     CDS             <1..1056
                     /locus_tag="VFV26_04745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HEX4845504.1"
                     /translation="RKLVLKGVDGIVFVVDSQVPMLDAGRESWMNLEENLRELGLSLQ
                     DIPVVFQWNKRDLKNVVPVDELEAAFNSRGMPSFQSVASDGTGVFETLRGITKLALGH
                     IKSHVLGEGQPAPKAPAPSAPTPANSEALTLSDLPSVTDLLDMEGSLQSTGGNPLADM
                     DDDTGIFIEAPHLPEPPAEDDSIAFISDEDDGAEGPGPGAPVEDSAEALPEPAFAAAP
                     DLPEPEPVPVFPAPEPEPLPAPAPAAVPRPAVKADPLAALASLKVEGKRPAVRPKGAD
                     SKDAISSLMGELTQVGRQGAPSVLRLEVPADVDGQDIEIFVQLRHRGQVVAEGQIQRP
                     APAKGITAKLSVELKRS"
     gene            1058..1627
                     /locus_tag="VFV26_04750"
     CDS             1058..1627
                     /locus_tag="VFV26_04750"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX4845505.1"
                     /translation="MRAPLLVALLVAPLAAALPGWWAAFLKAPVLSSRFRQESDSAVF
                     GKMAREGSLLLARGGKLKVAYDSGLTVTADGRQLVQYDPDTRTAQRIDLARAVRDFPL
                     LGILLDPSRIDALYRAEAQGGDGVRLVPRAPDLPPLLATGRRGLLRSLEWTDPTGARQ
                     RLELLDPKTPAMPGPGAFKPQVPAGTRWG"
     gene            complement(1639..2346)
                     /locus_tag="VFV26_04755"
     CDS             complement(1639..2346)
                     /locus_tag="VFV26_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX4845506.1"
                     /translation="MAAPEEAPGLVCFDLDGTLVDPLLGVQNCLRKTCEAFNLAMPDE
                     ATIRTWIGFGMRESLATLPGLEDPARLEATLDFYWERYREDGVFEHELYPGVFHLLHR
                     LKRQGHRIYIVSAKPSVFARRIAYQFDLNLIFDDIFGSTLKGRWQPKTEVLAGLAERG
                     TIWPGGVFIGDRGVDMEAARDHGLEAVGVGWGYGSHQELVDAGAQHIFDTVPDLDTWL
                     RTRFPQAEVFDAFSRSE"
     gene            complement(2354..2878)
                     /locus_tag="VFV26_04760"
     CDS             complement(2354..2878)
                     /locus_tag="VFV26_04760"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEX4845507.1"
                     /translation="MSLVHLDPGKQAPELVNAIIEIPTGSRIKYEIDHHTGLVHVDRV
                     LFSPFHYPAEYGFIPGTLAEDGDPADILVLINGSTYPGVVIRARPIALLRMTDDKGKD
                     AKILAVATDDPSYAHVTSRSDLPPHFLLEVEHFFLTYKDLERKSVASDGWGGKDEAHA
                     FVRASIEAYNRQKK"
     gene            complement(2925..>3333)
                     /locus_tag="VFV26_04765"
     CDS             complement(2925..>3333)
                     /locus_tag="VFV26_04765"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845508.1"
                     /translation="ATLAEAVPWENRIPETAAWEGDPDLLRQVAQNLLQNATRALEDT
                     AQPRVVLDAAEETMEGRPCWHLTLTDNGCGIPAEALSRVFDPFFSTFGGGTGLGLAVC
                     HRIIVAHGGLLFIESQVGRGTTVHLRLPAPAIS"
BASE COUNT          497 a         1134 c         1182 g          520 t
ORIGIN      
        1 cggaaactgg tgctcaaggg ggtcgacggc atcgtgttcg tggtggacag ccaggtgccc
       61 atgctggatg ccggccgcga gagctggatg aacctcgagg agaacctccg ggagctgggc
      121 ctgagcctcc aggacattcc cgtggtcttc cagtggaaca agcgggacct gaagaacgtg
      181 gtgcccgtgg acgaactcga agctgccttc aactcccgcg gcatgcccag cttccagtcc
      241 gtggcgtccg atggcaccgg cgtgttcgag accctgcggg gcatcaccaa gctggccctg
      301 gggcacatca agtcccatgt gctgggtgag ggccagcctg cgcccaaggc gccggcccca
      361 agcgcgccga cgcccgccaa ttccgaggcg ctcacgctat cggacctgcc ttcagtcacg
      421 gacctgctgg atatggaggg ttcgctccag tccaccgggg ggaatccttt ggccgacatg
      481 gacgacgata cgggcatctt catcgaggcc ccccacctgc cggagccccc tgcggaggac
      541 gattccatcg ccttcatcag cgatgaggat gatggggcgg aaggccctgg tcccggtgct
      601 ccggtggagg attccgctga agcgctgccc gagccggcat tcgcggccgc ccctgacctt
      661 ccagagcctg agcctgtgcc cgttttcccg gcacccgagc cggaacccct tccggccccg
      721 gctcccgcag cggtcccccg tcctgctgtg aaggcggacc cgctggcggc cctggcctcg
      781 ctgaaggtgg aaggcaagcg tcccgcggtg cgccccaagg gcgcggactc caaggacgcc
      841 atctcctcgc tgatgggcga gttgacgcag gtggggcgcc agggcgcgcc ctccgtgctg
      901 cggctcgaag tgcccgccga cgtggacggc caggacatcg agattttcgt ccagctgcgc
      961 caccggggac aggtggtggc cgagggccag atccagcgcc ccgcgcccgc caagggcatc
     1021 accgccaagc tcagcgtcga gctgaagcgg agctgaggtg cgggcccccc ttctcgtggc
     1081 cctgctggtg gcacccctcg cggcggcgct gcccggatgg tgggccgcct ttctcaaggc
     1141 gcccgtcctg tccagccgct tccggcagga gagcgacagc gccgtgttcg gcaagatggc
     1201 ccgggaaggc agcctcctgc tggcccgggg cggcaagctg aaggtggcct acgattccgg
     1261 attgaccgtg accgcggatg gccgccagct cgtgcagtac gatccggata cccgcacggc
     1321 ccagcgcatc gacctggccc gcgccgtgcg cgacttcccc ctgctgggaa tcctgctgga
     1381 cccgtcgcgg atcgacgcgc tctaccgcgc cgaggcccag ggtggcgatg gggtgaggct
     1441 ggtgcccagg gcgccggacc tgccgccgct cctggccacg gggcgcaggg gcctgctgcg
     1501 cagcctcgaa tggacggacc ccaccggcgc ccgccagcgg ctggagctgc tggatccgaa
     1561 gacgcccgcg atgccggggc ccggcgcctt caagccccag gtgcctgcgg gcacgcgctg
     1621 gggctgagcg cctgacctct actccgaacg gctgaaggcg tcgaacacct cggcctgggg
     1681 gaagcgggtg cgcagccagg tatccaggtc cggcaccgtg tcgaagatgt gctgggcccc
     1741 cgcgtccacc agctcctggt ggctgccata cccccagccc acgccgacgg cctccaggcc
     1801 atggtcccgg gcggcttcca tgtccacgcc ccggtccccg atgaagacgc ccccgggcca
     1861 gatggtgccc cgctccgcca ggcccgccag cacctcggtc ttgggctgcc agcgcccctt
     1921 caacgtgctg ccgaagatgt cgtcgaagat gaggttcaga tcgaactggt aggcgatgcg
     1981 ccgggcgaag acgctgggct tggcggacac gatgtagatg cggtgcccct ggcgcttcag
     2041 ccggtgcagc aggtggaaga cgccggggta cagctcgtgt tcgaagacgc catcctcccg
     2101 gtagcgctcc cagtagaaat ccagggtggc ctccaggcgc gccggatcct ccaggcccgg
     2161 gagggtggcc agggattcgc gcatgccgaa gccgatccag gtccggatgg tggcctcgtc
     2221 cggcatggcc aggttgaagg cctcgcaggt cttccgcagg cagttctgca cgcccaggag
     2281 gggatccacc agggtcccgt ccaggtcgaa gcagacgagg cccggggcct cctccggtgc
     2341 cgccacggct gccctacttc ttctgccggt tgtaggcctc gatggaggcc ctcacaaagg
     2401 catgggcctc gtccttgccg ccccagccat cgctggccac gctcttgcgc tccaggtcct
     2461 tgtaggtgag gaagaagtgc tcgacttcga gcaggaagtg cgggggtagg tcgctgcggg
     2521 aggtcacgtg ggcgtagctg ggatcatccg tggccacggc caggatcttg gcgtccttcc
     2581 ccttgtcgtc cgtcatgcgc agcagggcga tgggccgggc ccggatcacc acgccggggt
     2641 aggtcgagcc gttgatgagc acgaggatgt ccgccggatc gccgtcctcg gccagggtgc
     2701 cgggaatgaa cccgtattcg gccgggtagt ggaagggaga gaacagcacg cggtccacat
     2761 ggaccaggcc cgtgtggtgg tcgatctcgt acttgatgcg ggatcccgtg gggatctcga
     2821 tgatggcgtt gacgagctcg ggcgcctgct ttccgggatc aagatggacc agggacatgg
     2881 gcgctccgca aaggggttga ttttcgcacg gcctgtgacc ggcgtcacga gatcgctggc
     2941 gccggcagcc tcaagtggac ggtggtcccg cgccccacct ggctttcgat gaagagcagg
     3001 cccccgtggg ccacgatgat ccggtggcag acggccaggc ccaggcccgt gcctccgccg
     3061 aaggtgctga agaaggggtc gaacacccgg gacagggcct cggcgggaat gccgcagccg
     3121 ttgtccgtga gggtgaggtg ccagcagggg cggccctcca tggtctcctc cgccgcatcc
     3181 aggaccaccc ggggctgggc ggtgtcctcc agggcccgcg tggcgttctg gagcaggttc
     3241 tgcgccacct gccggaggag gtcggggtcg ccctcccagg cggcggtctc ggggatccgg
     3301 ttctcccagg gcacggcttc ggccagggtg gcg
//
LOCUS       DASUDT010000230         2934 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_143557, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000230 DASUDT010000000
VERSION     DASUDT010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143557"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VFV26_04770"
     CDS             complement(<1..409)
                     /locus_tag="VFV26_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845509.1"
                     /translation="MQAGDEVFATLAFLDEDGGLVRVETAEGTWTLKHLGLLTPVVTL
                     REEGGTVNLATFHPHAFRHGKLQFLDGAVFDWAWSHGDEAGGAFLDPGGKPLVRLHAH
                     SGRDLSTTPGLERCDVDLNPAPSAHLRQALLAAF"
     gene            complement(574..1326)
                     /locus_tag="VFV26_04775"
     CDS             complement(574..1326)
                     /locus_tag="VFV26_04775"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4845510.1"
                     /translation="MTRSILITGGSRGLGRACALHLAQTEKAHLILLGRDETALAAAA
                     ETVRQAGGTAETHGADVTDRPRLAAIARAIGPVDGLVAAAAVSGMTAVDGDSDAFFDE
                     ILAADLTGPWNTVRAFLPRMGPGGRIVLVSSVLGRFGVPGYGAYCAAKHGVHGLAKAL
                     ALELIGRGIVVNAVAPGWVDTDMAKTGIRQIAAATGQTEAQARAQAEAAVPVKRFFQP
                     EEIAHGIAWLLSPANTMQVGQCLNLDGGVVQT"
     gene            1405..1638
                     /locus_tag="VFV26_04780"
     CDS             1405..1638
                     /locus_tag="VFV26_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845511.1"
                     /translation="MVCETQDDRRQASMPVEAEGRGGLWSLPDGHRLPNLVDASPLVV
                     GDLAHPARLRATDLENPEDFHLRLTAWLLRQGR"
     gene            1792..2391
                     /locus_tag="VFV26_04785"
     CDS             1792..2391
                     /locus_tag="VFV26_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX4845512.1"
                     /translation="MNDMILEVMRTDLGKDKEAMAMWLPQEFFVAAGMAQSPGLDPRE
                     MEKELGFLLDYAVFMVQAKSKGEDGPVHLSSAQLRAAATLVDEAGRSVKPLTDLPPKV
                     EATLNAVRQGFASKGREEFRLLVFPGLGADGKPFASPSRRGTVTLKVGKVGEFPGLAL
                     SWKTPLASFVQPVACGKCKEPLQPAWSFCPWCARPTTAK"
     gene            complement(2396..>2934)
                     /locus_tag="VFV26_04790"
     CDS             complement(2396..>2934)
                     /locus_tag="VFV26_04790"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4845513.1"
                     /translation="AAVEAAWGGLDAFVGNAGIWAATPAELEDEGVALDILETNGTGL
                     FRWNAEVIPALRRAGGGSLVLLSSTAGQRGEAGYGAYAASKGAVISLVKSLAPELGPH
                     GIRVNAVAPGWVDTDMSASALRGDPDQRKRIAAAFPLGRIPEAGDLAGPVAFLLSPWA
                     AAITGEVLNVNGGTVLCG"
BASE COUNT          420 a         1026 c         1055 g          433 t
ORIGIN      
        1 cgaaagccgc gagcagggcc tgccgcaggt gggcggaggg ggccgggttc aggtccacgt
       61 cgcagcgttc cagtccgggc gtggtggaga ggtccctccc ggagtgggcg tgaaggcgga
      121 ccaggggctt gccgcccgga tcgaggaagg ccccgccggc ctcgtccccg tgactccagg
      181 cccagtcgaa gaccgcgcca tccaggaact ggagtttccc gtgccggaag gcatgggggt
      241 ggaaggtggc caggttcacc gttccgcctt cctcgcggag cgtcaccacg ggtgtcagga
      301 ggcccaggtg cttgagggtc caggtccctt cggcggtttc cacccggacc aggccgccgt
      361 cctcgtccag gaaggcgagg gtcgcaaaga cctcatcacc cgcctgcaat tggaattccg
      421 gaggcgagcc gcctccccgc cgccacgcca gcgtggcgcc cgaaaacccg gtgagcgatt
      481 tcatggcatg ccccttttcc cgcggggatg catccgcgca tggggaaagg tacgtccttc
      541 agaagggtcg cgtcagaggc ctgcttgaaa gattcaggtc tggaccacgc ccccgtcgag
      601 gttgaggcac tgtcccacct gcatggtgtt ggcggggctc agcagccagg cgatgccgtg
      661 ggcgatctcc tcgggctgga agaaccgttt caccggcacg gcggcctcgg cctgggcgcg
      721 ggcctgggcc tcggtctggc ccgtggcggc ggcgatctgg cggatgcccg tcttggccat
      781 gtccgtgtcc acccagcccg gtgccacggc gttcaccacg atgccgcggc cgatgagctc
      841 cagggccagg gccttggcca ggccatggac gccatgcttg gcggcgcagt aggccccgta
      901 gcccggcacc ccgaagcgcc ccagcacgct ggagaccagc acgatgcgcc cgccgggtcc
      961 catgcggggc aggaaggccc gcaccgtgtt ccagggcccc gtcagatccg cagccaggat
     1021 ctcgtcgaag aaggcgtccg agtccccgtc caccgccgtc atgcccgaga ccgcggcggc
     1081 cgccaccaga ccgtccacgg ggccgatggc ccgggcgatg gccgccaggc ggggccggtc
     1141 cgtgacatcc gccccatggg tttccgccgt gccacccgcc tgccggaccg tttccgccgc
     1201 ggcggccagg gcggtctcgt cccgtcccag gaggatcaga tgggcctttt cggtctgggc
     1261 gagatgcagg gcgcaagcgc ggcccaggcc gcgggagccg ccagtgatga gaatggaccg
     1321 ggtcatgggg gcctcctccc cgagggtgcc atgtggcaca gctggccggg atgcctatct
     1381 tttagattcc acaggagaaa caggatggtc tgcgagaccc aggatgaccg gcgccaggct
     1441 tcgatgccgg tggaggcgga gggccgcggc gggctgtggt ccctgccgga tggccaccgc
     1501 ctgcccaacc tggtggatgc ctcccccctg gtggttggcg acctcgcgca tcctgcgcgc
     1561 ctgcgggcca ccgacctgga aaaccccgag gatttccacc tgcggctgac cgcctggctg
     1621 ctacgccagg ggcgctgacg gcgcggaagg cgggagcgga gcggacttcg ccgtgataca
     1681 catgaggcct tcctttccag tggggtactc atgcgcgctt ggctcttggt ggcagctttc
     1741 ctgttctcct cggcggctcc ggtggcagcc caggccagag tgggcgggaa cgtgaacgac
     1801 atgatcctcg aggtcatgcg cacggacctg ggcaaggaca aggaggccat ggccatgtgg
     1861 ctgccccagg aattcttcgt ggccgccggg atggcccagt ccccggggct cgatcccagg
     1921 gagatggaga aggaactggg cttcctgctg gattacgcgg tcttcatggt gcaggcgaaa
     1981 agcaaaggcg aggacgggcc cgtgcatctc agctcggccc agctccgcgc cgcggccacc
     2041 ctggtggacg aggcgggccg ctcggtgaaa ccgctgacgg accttccgcc caaggtggag
     2101 gccacgctga acgccgtccg ccagggcttc gcttccaagg gccgggagga gttccggctg
     2161 ctggtcttcc ccggcctggg cgcggacggg aagcccttcg cctccccctc ccggcgcggg
     2221 accgtcacgc tcaaggtggg gaaggtcggc gagtttccgg gcctggcgct gagctggaag
     2281 acgcccctgg cttcgttcgt ccagccggtg gcctgcggga agtgcaagga gcccctccag
     2341 ccggcctggt ccttctgccc ctggtgtgcc cggcccacca ccgccaagta gcgggctacc
     2401 cgcagagcac ggtccctccg ttcacgttca acacctcgcc ggtgatggcc gcggcccagg
     2461 ggctgagcag gaaggccacg gggcccgcca ggtccccggc ttcggggatc cgccccaggg
     2521 ggaaggcggc ggcgatgcgc ttccgctggt ccggatcgcc gcggagggcc gaggcgctca
     2581 tgtccgtatc cacccagccc ggggccacgg cgttcacgcg gatgccgtgg gggcccagct
     2641 ccggcgcgag ggatttcacc agggagatga cggccccctt gctggcggcg taggcgccgt
     2701 accccgcctc gccccgctgg ccggcggtgc tcgacagcag caccaggctg ccgcccccgg
     2761 cgcgccggag ggcggggatc acctcggcgt tccagcggaa aaggccggtg ccattggtct
     2821 ccaggatgtc cagggccacc ccctcgtcct ccagctccgc cggggtggcg gcccagatgc
     2881 ccgcgttgcc cacgaaggcg tcgagcccgc cccaggcggc ctccacggcg gcca
//
LOCUS       DASUDT010000231         4933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1933143, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000231 DASUDT010000000
VERSION     DASUDT010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1933143"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..506)
                     /locus_tag="VFV26_04795"
     CDS             complement(30..506)
                     /locus_tag="VFV26_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845514.1"
                     /translation="MPLPLLAPAILALAPPAIPPMAPVLPVQKAIDLLNAGKVGEALD
                     QLDLAITRDPKDAQPLWIRAQVYREMAKQSKAWPAAWYQECAEESAMAMLDLEELDKN
                     AATNAMFLLQHLRDGERPAPPDPSPAAIQAFNAGEEAFGKEAWEEARAHYLRFFAE"
     gene            647..1057
                     /locus_tag="VFV26_04800"
     CDS             647..1057
                     /locus_tag="VFV26_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX4845515.1"
                     /translation="MFASVTDRIQSFLASGPFAVVGASTDRSKYGNKVLRCYQQHGHE
                     VHPINPKATEVEGLKAYPSLTALPVRVVAVSVITPPAATEQVVREAAAAGVKHIWMQP
                     GAESDAAVRAAESLGLNVIAGGPCLLVVMGYHEG"
     gene            complement(1149..2183)
                     /locus_tag="VFV26_04805"
     CDS             complement(1149..2183)
                     /locus_tag="VFV26_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845516.1"
                     /translation="MSPRPFPRPHPWQQVPWQERRSYWELDEAARRALCMALETEAAD
                     LARQADRALDDYAARPGTLEGQLVNGDVLATLLPSLRRNPTQGYEALEDPAGRAAIHL
                     NALGKRLRDRALARAHGEPVIIFMGGQATGKTTGALAMGPAFGAVFDAPHTEPEGVAF
                     LLDRIRRAGCGEIHLAYMDRDPGSALKAMLARSEREGRYVPLDRLARAHAGAPATFLG
                     LAPRLGPSLRLYHVRVDEEGADRMTEGEEALASVRARPRSAESVVAYQLQTAYLSLLR
                     TQTHDPQAWYPRDVLAGLNRTLDGWRRSEADHLLRRFYEAVAQRGPEGDPGPRGAPAG
                     GSEEPGSGLG"
     gene            2234..3139
                     /locus_tag="VFV26_04810"
     CDS             2234..3139
                     /locus_tag="VFV26_04810"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF012901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX4845517.1"
                     /translation="MSDALPATLLFPGQGTEAVGMSAGWEAHGAWLATLQAAEGHTGR
                     PLRRLMAEGPLEDLRAQRHAPCAVLAHSVGIFRAWRAAGMALPKAATGHSMGFYSALV
                     AAEVVPLEAALDLIAAVEDLSGAAFGEGAMGMAFFIGVPEREMQQALGSHPGLVLSNR
                     NGQAQFTASGPVPALEALVAELQPSALKAGLLPVKHPLHGPHMAALLPAIARRLLAVK
                     PAEPAFPLISHFDGRLLTTGPAAWDEGIASVALPVDWPVVVGQLKALGAPLVECGHGR
                     QLAGLTRWADRDLRVGSLQTPPGWA"
     gene            3267..>4933
                     /locus_tag="VFV26_04815"
     CDS             3267..>4933
                     /locus_tag="VFV26_04815"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4845518.1"
                     /translation="MPVSPPILGEALANRCSQVLYRCLEEVGSTKGALYLRMTDQSAF
                     DVVSFYGWPRGTRPPVSIPEGHPLLVRVQRERRTFVVNDALESPELTAFGQGGEWPRY
                     LITPVYLQGEWVGLLIQRDRIKGGAFEAARDEPPTVAICEDLAAALKEFRFHGAARGL
                     ASAHAAPGVVPEGLPTAADIIEAVAPVPERLLPPVSPAVPAMRAPGQGIPSAGPAHKE
                     RLYGFPGGQDPYTALPWEADRTLSGWVAPAPANPDRQRGMVSPEQRAFFWEIAGLISQ
                     ILPASAVALWIEDPEEIRPILAFSTLPLSPDLQQQILAHATFHLPAVKEPDLRLLSRT
                     GMAEVPELSGAFATYLPLLLNETPHGHDLLMVFRLEDHSFSLSEIEAIQQLSRVLALH
                     LQEARLHERYHHAFLSVSHRILQSGESRVPSLRPHSLATARLARDLALRLELPTEEVE
                     AISIAAILHDVGLLLLDPQMLAKPQLSPEEMKKVQGHPELAGVFLKDLRFPFDVVRMI
                     RHHHERWDGLGYPDRLRETAIPMGSRIIGLIEAYEVMISGKSYRQPHG"
BASE COUNT          678 a         1729 c         1750 g          776 t
ORIGIN      
        1 aaggcttgcc ggtgtccccg aacctcacgc tattccgcga agaacctcaa ataatgggcg
       61 cgggcctcct cccaggcctc tttcccgaag gcctcctctc cagcgttgaa ggcctggatg
      121 gcggccggcg atggatccgg aggcgccggg cgctccccat cccgcaagtg ctggagcagg
      181 aacatggcgt tggtcgctgc attcttgtcg agttcctcca ggtccaacat ggccatggcg
      241 ctttcctcgg cgcattcctg gtaccaggcg gcgggccatg ccttggattg cttggccatc
      301 tctcgataga cctgggcccg gatccaaagc ggctgggcat ctttcgggtc gcgggtgatg
      361 gccaggtcca gctgatcgag ggcctcgccg accttcccgg cgttcagcaa gtcgatggcc
      421 ttttgaacgg gaagaacggg agccatcgga ggaatggcgg gcggtgcgag ggccaggatg
      481 gcgggggcca ggagtgggag gggcatgtgg cgtccgggga atgactcagg attcccggat
      541 ggtgggctcg ggtcaaccgc ttgggaatcg ggaaggctga ggtggcgcat gacatttggt
      601 gcaccggcga cgatcatgtc cttccgccat cttcccggag gtcgtcatgt tcgcgtccgt
      661 cactgaccgc atccagtcct tcctcgcctc tgggcccttc gcggtggtgg gggccagcac
      721 ggaccgctcg aagtacggga acaaggtgct gcgctgctac cagcagcacg ggcacgaggt
      781 gcatcccatc aatcccaagg ccaccgaggt ggaggggctg aaggcctacc cgtcgctgac
      841 ggcgctgccg gtgagggtgg tggccgtttc ggtcatcacg cccccggccg ccacggagca
      901 ggtggtccgc gaggccgcgg ccgcgggcgt gaagcacatc tggatgcagc ccggcgccga
      961 gagcgacgcg gctgtccggg ccgcggagtc gctcggcctg aacgtcatcg ccggaggccc
     1021 gtgcctgctc gtggtgatgg gctaccacga gggctgaatc tgctgcgcag attcagtacg
     1081 gaattcgctt cgcgaattcc aaggtcaggc tttccctact gaattcgcgc agcgaattca
     1141 gcctgggttc agcctaggcc agacccaggt tcttccgaac ctccagccgg tgctcctcgt
     1201 gggcctggat caccttcggg acctcgctgc gccaccgctt cgtaaaatcg gcgaaggaga
     1261 tggtcggctt cgcttcggcg ccagccgtcg agggttcggt tgagtccagc gagcacgtct
     1321 cgcgggtacc aggcttgggg gtcatgggtc tgagtcctta gtagggaaag gtacgcggtc
     1381 tggagctggt aggcaaccac ggattcggcg gagcggggcc gggcgcggac gctggcgagg
     1441 gcctcctctc cctcggtcat gcggtcggcc ccctcctcgt ccacccgcac gtggtagagc
     1501 cgcagcgaag ggcccagccg cggggccagg cccaggaagg tggcgggggc cccggcgtgg
     1561 gcccgggcca gccggtccag gggcacgtag cggccctccc gttccgagcg ggccagcatg
     1621 gccttcaggg cgctcccggg atcgcggtcc atgtaggcca gatggatctc gccgcagccc
     1681 gcccggcgga tgcggtccag gaggaaggcc acgccttcgg gctcggtgtg gggggcgtcg
     1741 aacacggcgc cgaaggcggg gcccatggcc agggcgcccg tggtcttccc cgtggcctgg
     1801 ccgcccatga agatgatcac gggctcgccg tgggcccggg cgagggcgcg gtcccgcagg
     1861 cgcttgccca gggcgttcag gtggatggcg gcccgccccg cggggtcctc cagggcctcg
     1921 tagccctggg tggggttccg gcgcaggctg ggcagcaggg tggccagcac atcgccgttg
     1981 accagctggc cctccagggt cccgggtcgg gcagcgtagt catccagggc ccggtccgct
     2041 tggcgggcca ggtccgcggc ctcggtctcc agggccatgc acagggcgcg gcgggcggcc
     2101 tcgtccagct cccagtacga gcggcgctcc tgccagggca cctgctgcca ggggtggggc
     2161 cgcggaaagg ggcgggggga catggcccca gcgtactgga tgccgggcgc ccgggcaccc
     2221 tatgctcgaa accatgtctg atgcccttcc cgccaccctc ctctttcccg gccagggcac
     2281 ggaggccgtg ggcatgtccg cgggctggga ggcgcatggg gcctggctgg ccaccctcca
     2341 ggcggccgaa ggccacacgg gccggccgct gcggcgcctc atggcggagg ggccgctgga
     2401 ggacctccgg gcccagcgcc atgcgccctg cgccgtcctg gcccattccg tggggatctt
     2461 ccgggcctgg cgcgcggcgg ggatggccct ccccaaggcc gccaccgggc acagcatggg
     2521 gttctactcg gccctggtgg cggcggaggt ggtgcccctg gaggccgcgc tggacctcat
     2581 cgccgccgtg gaggatctca gcggggccgc gttcggtgaa ggcgccatgg gcatggcctt
     2641 tttcatcggc gtgccggaac gcgagatgca gcaggccctg gggagccatc ccggactggt
     2701 gctgtccaac cgcaacggcc aggcccagtt cacggcctcg ggaccggttc ccgccctgga
     2761 ggcgctggtg gcggagctgc agccttcggc cctgaaggcg gggctcctgc cggtgaagca
     2821 tccgctgcac ggcccccaca tggcggccct gctgcccgcc atcgcgcggc ggctgctggc
     2881 cgtgaagccc gcggagcccg ctttcccgct catctcccac ttcgacgggc gcctgctcac
     2941 gacgggcccg gcggcctggg acgaaggcat cgcctccgtg gccctgcccg tggactggcc
     3001 ggtggtggtg gggcagctca aggcgctggg cgcgcccctg gtggagtgtg gccacggccg
     3061 ccagctggcg gggctcaccc gctgggcgga ccgggatctc agggtgggtt cgctgcagac
     3121 gccgcccggc tgggcctgag gccgccgcac cggcggggac gaatccccgt tgtcaaaaat
     3181 cgctttgctt ctgaatctgg ccgatagatt ctcaggcggg ggccctgcca tgatggccag
     3241 ctgaaccctc gacccggaac cctcccatgc cggtttcccc tcccatcctc ggtgaagcgc
     3301 tcgccaaccg gtgttcgcag gtgctctacc gctgcctgga ggaggtgggc agcaccaagg
     3361 gcgccctcta cctgcgcatg acggaccagt ccgccttcga tgtggtgagc ttctacggct
     3421 ggccccgggg gacccggccg ccggtgtcca tccccgaggg gcatcccctc ctggtgcggg
     3481 tccagcggga acggcggacc ttcgtggtga acgatgccct ggagtcgcct gagctgacgg
     3541 ccttcggcca ggggggcgaa tggccccggt atctcatcac cccggtctac cttcaggggg
     3601 aatgggtggg gctgctgatc cagcgggacc gcatcaaggg cggcgccttc gaggcggcgc
     3661 gggacgagcc ccccaccgtg gccatctgcg aagacctggc cgcggccctg aaggaattcc
     3721 gcttccatgg cgccgcgcgg ggcctcgcct cggctcatgc cgcacccggc gtggtgcccg
     3781 aagggctgcc caccgctgcg gacatcatcg aggccgtggc cccggtcccc gagcggctcc
     3841 tgccgcccgt ttccccggcg gtgccggcca tgcgggctcc ggggcagggc attccctccg
     3901 ccggtcccgc ccacaaggag cggctctacg gattccccgg gggccaggac ccctataccg
     3961 ccctgccctg ggaggcggac cgcaccctca gcggctgggt ggcgcccgcg ccggcgaacc
     4021 ccgaccgcca gcgcggcatg gtgtccccgg agcagcgggc cttcttctgg gagatcgcgg
     4081 ggctcatcag ccagatcctg ccggccagcg ccgtggccct ctggatcgag gatcccgagg
     4141 agatccgccc catcctggcc ttcagcacgc tgccgctgtc cccggatctg cagcagcaga
     4201 tcctggccca cgccaccttc cacctgcctg cggtgaagga gccggacctg cgcctgctct
     4261 cccggaccgg gatggccgag gtgccggaac tgtccggcgc cttcgccacc tacctgcccc
     4321 tgctgctcaa cgagaccccc cacggccacg acctgctgat ggtgttccgc ctggaggacc
     4381 actccttctc cctgtccgag atcgaggcca tccagcagct gagccgggtg ctggcgctcc
     4441 acctccagga ggcgaggctc cacgagcgct accaccacgc cttcctgtcc gtgagccacc
     4501 gcatcctgca atcgggcgaa agccgcgtgc cgagcctgcg tccccacagc ctggccacgg
     4561 cccggctggc ccgggacctg gccctgcgcc tcgagctgcc caccgaggag gtggaagcca
     4621 tcagcatcgc cgccatcctc catgacgtgg gcctgctgct gctggacccc cagatgctgg
     4681 ccaagccgca gctgagtccg gaggagatga agaaggtcca gggtcacccg gaactggccg
     4741 gcgtcttcct caaggacctg cgcttcccct tcgatgtggt gcggatgatc cggcaccacc
     4801 atgagcgctg ggacggcctc ggctatcccg accgcctgcg cgagactgcc atccccatgg
     4861 ggagccgcat catcggcctc atcgaggcct acgaggtgat gatcagcggc aagagctacc
     4921 ggcagcccca tgg
//
LOCUS       DASUDT010000232         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1756292, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000232 DASUDT010000000
VERSION     DASUDT010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1756292"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2218
                     /locus_tag="VFV26_04820"
     CDS             <1..2218
                     /locus_tag="VFV26_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX4845519.1"
                     /translation="APPPSRPPSGPPSGRFRAAGGVERIDRFEVIRRLGKGAMGEVYL
                     GRDPKLGREVALKVISAGSAFGEEAQARFEREARAAAQLNHPHIVTVYEFGEDEGLHY
                     LAMEHIQGEELETLIQKGQAPKAELLEVLVQVCEGLGYAHERGVIHRDIKPANILVTR
                     HGKRAHAKLMDFGVAQMGPSGLTQTGTWMGTVSYMAPEYLDTGKASASSDLFALGVIL
                     YEILTGGRKPFQGDTTTSVLNRILLHPPEPLKPADLKDISGRLLAVVERALAKHPDNR
                     YPSAEALAAAIREAMSGQPAEPAVPAAAAPAPDTPKPASETTGQRIRVGKGGQGQCLS
                     LKVALRQARPGMEILMLPGVYRESVTVDQDVTILALGESGEVILEGVAGPAVSLLAGG
                     ALLRGLTLKAADGGAALRIGRGAPVVEACAIEGGALVEGGGTAPLFRSCVFTGGATGL
                     LAGEGTQARVDGGVFEGFREAGLLVRPGALVSVQGGEIGPGEGVAVRIQGRGQGRLED
                     CGLSGAAGAVEVEPDGRVQLTKCRLLDSRFAGLLALERSQAVLESCDLGNHDCTGAHV
                     LAGANVMLRQCRLVGNAGFGLSVMDRGLATLDGCVVQANGGAGLLIHHGATVQARDCS
                     FSEGRSLGVDCAEGGQGVLEACEISGNAGAGVQVEPGGSLLLVRCTLKEGRDTGLLLL
                     EDSQATLEECVVRRNARGGILLAKDAADPLLRGNNRIEDGFQRVDASGKLVKVAPL"
     gene            complement(2236..>3000)
                     /locus_tag="VFV26_04825"
     CDS             complement(2236..>3000)
                     /locus_tag="VFV26_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845520.1"
                     /translation="DRVVRLADRMRVTPGLGFFEKGKELPILKIRDLPKHPLFEARGM
                     VANAWERDGEILVGLKFGELGDVELRQIREVLTIREQMQRNPASTTGDGTVKTTRTKA
                     PATAPTGPASRVNPAGVQTPDALTRLGRRGTSLLLAMPRGPGRDAVQAALGAAGYLRL
                     DPVDTLAQALDRLRVDSGAASRLLMLEAPAGAAPPLNDLRSMQRELGELRELPVALIQ
                     AGGMPEETEDALIRPLPWPGTADLAWLPLLDELAGL"
BASE COUNT          410 a         1020 c         1150 g          420 t
ORIGIN      
        1 ggctccaccg ccgtcgaggc ccccgtcggg tcccccctcc ggccgcttca gagccgcggg
       61 cggcgtcgag cggatcgatc gcttcgaggt gatccgccgt ctgggcaagg gcgccatggg
      121 cgaggtctac ctgggccggg atcccaagct ggggcgggag gtggccctca aggtcatttc
      181 cgccggttcc gccttcgggg aggaggccca ggcccgcttc gagcgggagg cccgggccgc
      241 ggcccagctg aaccatcccc acatcgtgac cgtctacgaa ttcggcgagg acgaaggcct
      301 gcactacctg gccatggagc acatccaggg cgaggagctg gagaccctga tccagaaggg
      361 gcaggccccc aaggccgagc tgctggaagt gctggtccag gtctgcgaag gcctgggcta
      421 cgcccacgaa cggggggtca tccaccgcga catcaagccc gccaacatcc tggtcacccg
      481 gcacgggaag cgggcccacg ccaagctcat ggatttcggc gtggcccaga tgggcccctc
      541 gggcctcacc cagacgggca cctggatggg caccgtgagc tacatggcgc cggagtacct
      601 ggataccggc aaggcctcgg ccagctcgga cctcttcgcc ctgggcgtga tcctctacga
      661 gatcctcacg ggcggacgga agcccttcca gggcgacacg accacctccg tgctgaaccg
      721 catcctgctg cacccgccgg agcccctgaa accggcggac ctcaaggaca tctccggccg
      781 cctcctggcc gtcgtcgagc gggccctggc gaagcacccg gacaatcgct atcccagcgc
      841 cgaggcgctg gccgctgcca tccgcgaagc catgagtggc cagccggcgg agccggcggt
      901 cccggctgcg gcggccccgg ctcccgacac gcccaagccc gcctcggaga ccacgggcca
      961 gcggatccgg gtgggcaagg gcgggcaggg ccagtgcctc agcctgaaag tggccctgcg
     1021 ccaggcccgg ccgggcatgg agatcctcat gctgccgggg gtctaccgcg aatccgtgac
     1081 ggtggaccag gatgtgacga tcctggccct cggggaatcc ggcgaggtca tcctcgaggg
     1141 ggtggccggg cccgcggtgt cgctgctggc cggaggggcg ctgctgcggg ggctgaccct
     1201 gaaggcggcc gatggcggag ccgccctccg gatcggccgg ggcgcgcccg tggtcgaggc
     1261 ctgcgccatc gaaggcgggg ccctggtcga gggcgggggc acggcgcccc tgttccggtc
     1321 ctgcgtcttc acggggggag ccacgggact gctggccggg gaaggcaccc aggcccgggt
     1381 ggatggcggg gtgttcgaag gattccggga ggcgggcctg ctggtgcggc caggggccct
     1441 ggtctccgtg cagggtggcg agatcgggcc cggggagggg gtcgcggtcc gcatccaggg
     1501 gcgtggccag ggccggctgg aggactgcgg cctatcgggg gcggccgggg ccgtggaggt
     1561 ggagccggac ggccgggtgc aattgaccaa gtgccgcctg ctggacagcc ggttcgccgg
     1621 cctcctggcg ctggagcgca gccaggcggt gctggaatcc tgcgacctcg gcaaccatga
     1681 ctgcaccggg gcccacgtgc tggcgggagc caacgtcatg ctccggcagt gccgtctggt
     1741 gggcaatgcg ggcttcggcc tgtccgtgat ggaccggggc ctggccaccc tggatggctg
     1801 cgtggtccag gccaatggcg gggcgggcct gctgatccac cacggcgcca cggtccaggc
     1861 ccgggactgt tccttctccg agggccgttc cctgggcgtg gattgcgccg agggggggca
     1921 gggcgtgctg gaggcctgcg agatctcagg caatgcgggc gcgggggtgc aggtggagcc
     1981 cgggggcagc ctgctgctgg tgcgctgcac cctcaaggag ggacgggaca cgggtctgct
     2041 gctgctggag gattcccagg cgacgctgga agagtgtgtg gtgcgccgca atgcccgggg
     2101 cggaatcctg ctggccaagg acgcggcgga tccgctgctg cgggggaaca accgcatcga
     2161 ggacggcttc cagcgggtgg atgccagcgg caagctggtg aaggtggcac cgctctagga
     2221 accggcgcca gggccctaca atcccgccag ttcgtccagc agcggcagcc aggcgaggtc
     2281 ggcggttccg ggccagggca gggggcggat cagggcatcc tcggtctcct cgggcatgcc
     2341 gcccgcctgg atcagcgcca cgggcagttc gcgcagctcg cccagttcgc gctgcatgct
     2401 ccgcaggtcg ttgaggggtg gggccgcgcc tgcgggggct tccagcatca ggaggcggct
     2461 cgcggcgccg gagtccaccc gcagccggtc gagggcctgg gccagcgtgt ccacgggatc
     2521 caggcggagg tagccggcgg cgccgagggc ggcctggacc gcgtcccgcc cggggccccg
     2581 gggcatggcc agcagcaggc tggtgccccg ccgccccagc cgggtcagcg catccggagt
     2641 ctgcactccg gcggggttta cccggctggc ggggccggtg ggggccgtcg cgggagcctt
     2701 ggtccgggtt gtcttcacgg ttccatcgcc ggtggtgctg gcgggattcc gctgcatctg
     2761 ctcccggatg gtcaggacct cccggatctg gcggagttcc acatccccca gttcgccgaa
     2821 cttcaggccc acgaggatct cgccatccct ctcccaggca ttcgccacca taccccgggc
     2881 ctcgaagagc gggtgcttgg gcaggtcgcg gatcttcagt atggggagct ccttcccctt
     2941 ctcgaagaac cccagccccg gcgtgacgcg catgcggtcc gccaggcgca ccacccggtc
//
LOCUS       DASUDT010000233         3695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_961005, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000233 DASUDT010000000
VERSION     DASUDT010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961005"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VFV26_04830"
     CDS             <1..667
                     /locus_tag="VFV26_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX4845521.1"
                     /translation="AHFFEVHEAFAPNLVVGFGRIEGRSVGIVANQPAFYAGVLDISS
                     SEKGARFVRFCDAFNIPLITFEDVPGFLPGVTQEHGGIIRHGAKLLFAFCEATVPKIT
                     IITRKAYGGAYCVMASKHIRTDFNFAYPTAEIAVMGAEGAMNVLHGKSIAIAPDPAAR
                     KAELVAEYNEKFANPYIAAEFGFVDEVILPRETRQKLVKALAFLDTKRDSTPPKKHGN
                     IPL"
     gene            685..1779
                     /locus_tag="VFV26_04835"
     CDS             685..1779
                     /locus_tag="VFV26_04835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845522.1"
                     /translation="MRPVLYALAGLSLAAQDERIFTESMARLERQDPAGKMDLEDGSP
                     IRAAAMALDPALAPEKTRFAAASWLWATNMMRGLQPGKDRTYLQAARGQADLLKAWTL
                     LEAVGGDLARTRDGLRLELGWRLLDLGKMRAAYAAVSARPSPTTRELVHAFFVSAHLG
                     DWPGMRRLAQSLVAQGGQLEGLHAAAENTPTMFDYESLLKAVDAGRPDRPAGPLAVRS
                     LRISNQRIRVLSLSGSNQAFLKTAEGWPKGWTDKADAAAELLQVGAAAHWVEGAAQPP
                     VSGFLDATRLYLVGYRISQGGGGDSGRQEQVWDLRPDPQHPHRWRGTHTLTARVAGAD
                     PKAGPAFRATFEVQWDMRPVEDHPEPGPGS"
     gene            1843..2712
                     /locus_tag="VFV26_04840"
     CDS             1843..2712
                     /locus_tag="VFV26_04840"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX4845523.1"
                     /translation="MRQAFLDDQGAVRNGWKVLGFFALMLPLGALLGGLFRLFPAGAR
                     DLVPGPWIGALSVLAAAWICLRAEGGGLASLGLRPDGRFLRDLALGTLAGFALIALVA
                     ALVFAAGGFHWTRTPGLGVQALLKGAWLYLAVACFEEILFRGYPFQRSVRGLGFTPAQ
                     LAFAIFFALGHWGNPGMAGATKAWATLNIALAALLLALCWRRTGSLALPIGVHLGWNW
                     TQGTLLGFGVSGTADRGWWTPVFHGRPEWLTGGAFGLEASVICTLACGLAILGLWRWK
                     GSASADASTASAS"
     gene            complement(2678..3178)
                     /locus_tag="VFV26_04845"
     CDS             complement(2678..3178)
                     /locus_tag="VFV26_04845"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4845524.1"
                     /translation="MSATLRPSTPADLDIHVAHRIAMFRDMDMGSEEGLRRMAEAFRH
                     QLRNGFVTGQCRGFLMEDEGRPVAGVLLMMKEALPTPVTPLSVRGYLFNIYTEPAHRR
                     RGLAARLTDAALELARAIGLEIVELHASLEAEGLYQRMGFVPTSEMRLVMGAGIKTPK
                     QWKHRR"
     gene            3208..>3695
                     /locus_tag="VFV26_04850"
     CDS             3208..>3695
                     /locus_tag="VFV26_04850"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4845525.1"
                     /translation="MHYAALASGSKGNCHALSAGGQTLLIDAGISLRQIRQRLETLGM
                     DPESVRAVAITHEHSDHIGALGVILRRTEWAILATAATREAVGRAQGAEIPASRWIEV
                     AAGRPADWNGWRILPFALPHDAEDPVAFRVEAGGAAAAVVTDLGHPTALVADHLQDLD
                     LLV"
BASE COUNT          504 a         1384 c         1235 g          572 t
ORIGIN      
        1 cgcccatttc ttcgaggtgc atgaggcctt cgcgcccaac ctcgtggtgg gcttcggccg
       61 catcgagggc cgcagcgtgg gcatcgtggc caaccagccc gccttctacg ccggggtgct
      121 ggacatctcc tccagcgaga agggcgcccg cttcgtgcgg ttctgcgacg ccttcaacat
      181 cccgctcatc accttcgagg atgtgccggg cttcctgccg ggcgtcaccc aggagcacgg
      241 cggcatcatc cgccacggcg ccaagctgct cttcgccttc tgcgaggcca cggtgcccaa
      301 gatcaccatc atcacccgca aggcctacgg cggcgcctac tgcgtgatgg ccagcaagca
      361 catccgaacc gacttcaact tcgcctatcc caccgcggaa atcgcggtca tgggcgccga
      421 gggggccatg aacgtgctgc acggcaagtc catcgccatc gcgccggatc ccgccgcccg
      481 caaggccgag ctggtggccg agtacaatga gaagttcgcg aatccctaca tcgccgcgga
      541 attcggcttc gtggacgaag tgatcctgcc ccgcgagacc cgccagaagc tcgtgaaggc
      601 cctggccttc ctcgacacca agcgggacag cacacccccc aagaagcacg gcaacatccc
      661 gctctaagcg gtccccgagg ccccatgcgc ccagtcctct acgcccttgc cggtctcagc
      721 ctggccgcac aggacgagcg gatcttcacc gaatccatgg cccgcctcga aaggcaggac
      781 ccggcgggaa aaatggatct cgaggacggc agccccatcc gtgccgccgc catggccctg
      841 gatccggccc tggccccgga gaaaacccgg ttcgccgcgg cctcctggct ctgggccacg
      901 aacatgatga ggggactcca gccgggaaag gatcggacct acctccaggc cgcccgcggg
      961 caggccgatc tcctgaaggc ctggaccctg ctggaggccg tgggcgggga cctcgcccgg
     1021 acccgggatg gcctgcgcct ggaactgggc tggcgccttc tggacctggg gaagatgagg
     1081 gccgcctacg ccgcagtctc ggcgcggccc tccccgacca cccgcgagct cgtccacgcc
     1141 ttcttcgtct ccgcccatct gggcgattgg ccgggcatga ggcggctcgc ccagtcgctg
     1201 gtggcccagg gcgggcaact ggagggcctt cacgcggccg ccgaaaacac ccccaccatg
     1261 ttcgactacg aatcgctgct caaggccgtc gatgcgggac gtccagaccg gcccgcggga
     1321 cccctggccg tccgctccct gcggatctcc aaccagcgga tccgggtcct gagcctatcg
     1381 ggcagcaacc aggccttcct caagaccgcg gagggctggc ccaaggggtg gacggacaag
     1441 gccgacgccg cggccgaact tctccaggtg ggcgcggccg cccactgggt ggagggcgcc
     1501 gcccagcccc cggtttcggg ctttctggat gccacccgcc tctacctcgt cgggtaccgg
     1561 atctcgcagg gagggggcgg cgattccggg cgccaggagc aggtgtggga tctgcgcccg
     1621 gacccgcaac atccccaccg gtggcgcggc acgcacacgc tcacggccag ggtggccggg
     1681 gcggatccca aggccgggcc cgccttccgc gcgaccttcg aggtccagtg ggacatgcgc
     1741 ccggtggagg accatcccga acccgggccc ggttcctgac gcttccccgc cgcctcaacc
     1801 ggatggcgct ttccggcgta gccggacctt ctcggagtct ccatgcgcca agcctttctc
     1861 gatgaccagg gcgcggtgcg caatggatgg aaggtcctgg gattcttcgc cctcatgctt
     1921 ccccttggcg cccttctggg cggcctgttc cggctctttc cggccggcgc ccgggacctg
     1981 gtgccggggc cgtggatcgg ggccctttcc gtgctcgccg ccgcatggat ctgcctgcgg
     2041 gcggagggtg gggggctcgc ctccctgggc ctgcgccccg atggacgctt cctgcgcgac
     2101 ctggccctcg gcaccctggc gggcttcgcc ctgatcgcgc tcgtggcggc cctggtgttc
     2161 gccgccggag gcttccactg gacccgcacg cccggcctgg gcgttcaggc gctgctgaag
     2221 ggggcctggc tctacctggc cgtggcctgc ttcgaggaga tcctcttccg cggctatccg
     2281 ttccagcgca gcgtgcgggg cctcggcttc acccccgccc agctggcctt cgccatcttc
     2341 ttcgccctcg gccactgggg caacccgggc atggccggcg ccaccaaggc ctgggcgacc
     2401 ctcaacatcg cgctggccgc cctgctgctg gccctctgct ggcgccgcac cggcagcctg
     2461 gcgctcccca tcggcgtgca cctgggctgg aactggaccc agggcaccct cctcggcttc
     2521 ggtgtgagcg gcaccgccga ccggggctgg tggacgccgg tcttccacgg ccgcccggag
     2581 tggctcacgg gcggcgcctt cgggctggag gccagcgtca tctgcaccct ggcctgcggg
     2641 ctggcgatcc tcggactctg gcgctggaag ggctcggcta gcgccgatgc ttccactgct
     2701 tcggcgtctt gatgccggcg cccatcacca gccgcatctc gctggtgggc acgaagccca
     2761 tgcgctggta gaggccctcg gcctcgaggc tcgcgtgcag ctccacgatc tccagcccga
     2821 tcgcccgggc cagctccagg gccgcatccg tgagcctggc ggccaggccc cggcggcggt
     2881 gggcgggctc cgtgtagatg ttgaagagat agccccgcac cgaaagcggg gtcaccggcg
     2941 tgggaagcgc ctccttcatc atcagcagca ccccggccac cgggcggcct tcgtcctcca
     3001 tcaggaagcc ccggcactgg cccgtcacga acccgttccg cagctggtgc cggaaggcct
     3061 cggccatgcg ccgcagtcct tcctctgagc ccatgtccat gtcccggaac atcgcgatcc
     3121 ggtgggccac gtggatgtcc aggtcggcgg gtgtggaggg gcggagggtc gcgctcatgc
     3181 ccgtcagtgt aggcggtatc ctggcccatg cactacgcgg ccctcgcctc cggttccaag
     3241 gggaactgcc acgccctgtc ggcggggggg cagaccctgc tcatcgatgc gggcatctcg
     3301 ctgcgccaga tccgccagcg cctggagacc ctggggatgg atccggaatc cgtgcgcgcc
     3361 gtggccatca cccacgagca ttcggaccat atcggcgccc tgggggtgat cctccggcgg
     3421 acggagtggg ccatcctcgc caccgccgcc acccgggagg ccgtgggccg ggcccagggc
     3481 gccgagatcc ccgcctcccg ctggatcgag gtggcggcgg ggcggcccgc ggactggaac
     3541 ggctggcgca tcctcccctt cgccctgccc catgatgcgg aagaccccgt ggccttccgc
     3601 gtggaggcgg gtggcgctgc cgccgccgtg gtcaccgatc tgggacaccc cacggccctg
     3661 gtggccgacc acctccagga cctggacctc ctggt
//
LOCUS       DASUDT010000234         4272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_320797, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000234 DASUDT010000000
VERSION     DASUDT010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4272
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320797"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="VFV26_04855"
     CDS             <1..633
                     /locus_tag="VFV26_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="HEX4845526.1"
                     /translation="RGLMASDPTCGDCGERSLDLARAFLARLPEVRRLLATDVQAGFE
                     GDPAATSPDEVLFSYPGLLAITSQRLAHELLKLGVPLLPRMITEHAHSLTGIDIHPGA
                     QIGERFFIDHGTGVVIGETCILGRNVRIYQGVTLGAKSFPLDAEGHPVKGVPRHPVVE
                     DDVIIYSNATVLGRITLGKGSAIGGNVWLTRSVPAGSIITQANEKDGMPA"
     gene            630..1031
                     /locus_tag="VFV26_04860"
     CDS             630..1031
                     /locus_tag="VFV26_04860"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX4845527.1"
                     /translation="MNSLLRFLFSAIGLLVASALVPGLGHGTFLDLLVVAILLGALNA
                     TVGSFLKLIALVPVACSFGCFSLVINGLVFWLAGALSARLGLGFTVSGFWAGFFGALV
                     SSVIASILGAIFIPKDRRRPQGPPPPIKVVN"
     gene            complement(1028..1753)
                     /locus_tag="VFV26_04865"
     CDS             complement(1028..1753)
                     /locus_tag="VFV26_04865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4845528.1"
                     /translation="MGRPVLRPFLVWILGALALMLAVCLCFLLAPFLGGPRAFWLVAP
                     RYIRGTARAFGIRRELEGWWALPQDLREGVRPAVFIGNHTSLFDPPLMISTLPSRPVF
                     VAKRELARVPFLGWVIWLADFIFIDRGNREAALRSLREAAGRIRDGQSIVAFPEGTRS
                     RDGELLPFKKGAFALAFEAGVPVVPFAIQGGPGILPKGTWRVGGGAYRITVGEPLEPS
                     FFPDVDALRGAAEAALRELLARP"
     gene            complement(1769..2401)
                     /locus_tag="VFV26_04870"
     CDS             complement(1769..2401)
                     /locus_tag="VFV26_04870"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4845529.1"
                     /translation="MSRLLLCLTLAASLCAQAPAPVPAAQAPGAPATPAPAVKPRVQL
                     LTNYGPIVVELEPELAPKTVANFLQYVKDGHYKGTIFHRVIEGFMIQGGGLLENMDEK
                     PLREPILNEAPQTFKAGLKNTRGTLAMARTGSPHSATAQFYINVADNKSLDHRDLSEE
                     GYGYCAFGRVVSGMEAVDKIEKVRTEWRKGQSGVPQYPVRLKDAVLLPPQ"
     gene            2469..3383
                     /locus_tag="VFV26_04875"
     CDS             2469..3383
                     /locus_tag="VFV26_04875"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX4845530.1"
                     /translation="MPFLDLPPWILTLFLAPFGLLLGSFSNVLIHRLPQEAPEDRNVV
                     TKPSHCPSCKVRIKPWHNVPLFGWLWLRGKCAACGWRIPFRYPLVELLGGLVLGGAHW
                     LFPFGTLVWLKAVVCAYALVVLFFTDFTEMILPDAIQFPLMAFGVLCALPQLAWPEAL
                     LKTWGRGDALIQALAFHNGLQPAPAFHGFEPAVTWPQSLLGLAIGYGAPALLNLAYKA
                     IRKTDGLGMGDFKMLAWLGAFWGWAPMLGILFLGAGLGAAVGVPLMLMRRSGGQTMLP
                     FGCFLALATPIVVFFGRALWLGYMGMVG"
     gene            complement(3566..3970)
                     /gene="mce"
                     /locus_tag="VFV26_04880"
     CDS             complement(3566..3970)
                     /gene="mce"
                     /locus_tag="VFV26_04880"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX4845531.1"
                     /translation="MQLLRINHLGIATPGLDEAMARMARLFGMAADHTEEVAEQKVKT
                     AFFPVGESTLEFLETTDPEGPIGKFMAKRGPGIHHVCFEVDDIDEAVASLLAKGVRMI
                     DQAPRNGAHGCRVAFIHPAETGGVLMELSQGS"
BASE COUNT          600 a         1514 c         1439 g          719 t
ORIGIN      
        1 cgggggctca tggcctcgga ccccacctgc ggcgactgcg gcgaacgctc cctggacctg
       61 gcccgggcct tcctggcgcg gctgcccgag gtgcggcgcc tgctggccac ggacgtccag
      121 gcgggcttcg agggcgatcc cgccgccacc agccccgacg aggtcctgtt cagctatccg
      181 ggcctgctgg ccatcaccag ccagcgcctg gcccacgagc tgctgaagct gggcgtgccc
      241 ctgctgcccc gcatgatcac cgagcacgcc cacagcctca cgggcatcga catccatccc
      301 ggcgcccaga tcggcgaacg cttcttcatc gaccacggca ccggcgtcgt catcggcgag
      361 acctgcatcc tcggccgcaa cgtgcggatc taccagggcg tgaccctggg cgccaagagc
      421 ttcccgctgg acgccgaagg ccacccggtc aagggcgtcc cccgccaccc cgtggtggag
      481 gacgacgtca tcatctactc caacgccacg gtgctgggcc gcatcaccct cggcaagggc
      541 tccgccatcg gcggcaacgt gtggctcacc cgcagcgtgc ccgcgggcag catcatcacc
      601 caggccaatg aaaaggacgg gatgcccgca tgaacagcct gctccgcttc ctcttctccg
      661 ccatcggcct gctggtggcc agcgccctcg tgccgggcct gggccacggc accttcctcg
      721 acctgctggt ggtggccatc ctcctggggg ccctcaacgc caccgtgggc agcttcctga
      781 agctcatcgc cctggtgccc gtggcctgct ccttcggctg cttcagcctg gtcatcaacg
      841 gcctggtgtt ctggctggcg ggggcgctgt ccgccaggct gggcctgggc ttcaccgtct
      901 cgggattctg ggccggcttc ttcggcgcgc tggtgagcag cgtcatcgca tccatcctgg
      961 gcgccatctt catccccaag gaccggcggc ggccccaggg accgccgcca cccatcaaag
     1021 tggtgaacta gggcctcgcc aggagttcac gcagcgccgc ttccgcggcc ccgcgcaggg
     1081 cgtcgacatc ggggaagaag ctgggttcca agggctcgcc cacagtgatg cggtaggctc
     1141 cgccccccac ccgccaggtg cccttgggga ggatgccggg cccgccctgg atggcgaagg
     1201 gcaccacggg cacgcccgcc tcgaaggcca gggcgaaggc gcccttcttg aagggcagga
     1261 gctccccgtc gcggctgcgg gtgccttcgg gaaaagccac gatgctctgg ccgtcgcgga
     1321 tgcggcccgc cgcttcgcgc aggctccgga gcgccgcctc gcggttgccc cggtcgatga
     1381 agatgaaatc cgccagccag atgacccagc ccaggaaggg cacccgcgcc agctcccgct
     1441 tggccacgaa gaccgggcgg ctgggcagcg tggagatcat caggggcgga tcgaacaggg
     1501 aggtgtggtt gccgatgaac acggcggggc gcaccccttc gcggagatcc tgcggcagcg
     1561 cccaccagcc ttccagttcc cggcggatgc cgaaggcccg ggccgtgccg cggatgtagc
     1621 ggggcgccac gagccagaaa gcccgcggac cgcccaggaa gggggccagc aggaagcaca
     1681 ggcacacggc cagcatcagg gccagggccc cgaggatcca gaccaggaag gggcggagga
     1741 cgggccggcc catcaccgga tatgccacct actggggagg cagcaggacg gcatccttga
     1801 gccgcacggg gtactggggc acgccggatt ggcccttccg ccattcggtg cggaccttct
     1861 cgatcttgtc cacggcctcc atgccggaca ccacccggcc gaaggcgcag tagccgtagc
     1921 cttcttcgct cagatcccgg tggtccagac tcttgttgtc cgcgacgttg atgtagaact
     1981 gggccgtggc gctgtggggc gagcccgtgc gggccatggc gagggtgccg cgggtgttct
     2041 tcagtccggc cttgaaggtc tggggcgctt cgttgaggat gggctcccgc aggggcttct
     2101 cgtccatgtt ctccagcagc ccgccgccct ggatcatgaa gccctcgatg acccggtgga
     2161 agatggtgcc cttgtagtgg ccgtccttca cgtactggag gaagttggcc acggtcttcg
     2221 gcgccagctc cggctccagt tccaccacga tgggcccgta gttcgtgagc agctgcaccc
     2281 gcggcttgac cgccggcgcg ggcgtggcgg gagccccggg cgcctgcgcc gcggggacgg
     2341 gcgcgggagc ctgggcgcac agggatgcag cgagggtgag gcagagcagc agacgggaca
     2401 catggactcc agggtgttcc cttccattct gccgcgaacc gggcggaagt ccccggtatc
     2461 gttgtcccat gccattcctc gacctcccgc cctggatcct gaccctgttc ctggcgccct
     2521 tcgggctgct gctgggctcg ttctccaacg tgctcatcca ccggctgccc caggaggcgc
     2581 cggaggaccg gaacgtggtc acgaagccca gccactgccc ctcctgcaag gtgcgcatca
     2641 agccctggca caacgtgccc ctcttcggct ggctgtggct gcgggggaag tgcgcggcct
     2701 gcggctggcg cattcccttc cgctaccccc tggtggagct gctgggcggc ctcgtcctgg
     2761 gcggcgccca ctggctcttc cccttcggga ccctcgtctg gctcaaggcc gtggtctgcg
     2821 cctacgcgct ggtggtgctg ttcttcacgg atttcaccga gatgatcctg ccggatgcga
     2881 tccagttccc cctcatggcc ttcggcgtgc tctgcgccct gccccagctg gcctggcccg
     2941 aggccctgct gaagacctgg ggccggggcg acgcgctcat ccaggccctg gccttccaca
     3001 acggcctgca gcccgcgccc gccttccacg gcttcgaacc cgccgtcacc tggccgcaga
     3061 gcctcctggg cctggccatc ggctacggcg cccccgccct gctcaacctc gcctacaaag
     3121 ccatccggaa gaccgatggc ctgggcatgg gcgacttcaa gatgctcgcc tggctgggcg
     3181 ccttctgggg ctgggccccc atgctgggga tcctcttcct gggcgcgggc ctgggcgccg
     3241 ccgtgggcgt gcccctcatg ctcatgcggc gctccggcgg ccagaccatg ctgcccttcg
     3301 gctgcttcct ggccctggcc acgcccatcg tggtcttctt cggacgggcg ctgtggctgg
     3361 ggtacatggg gatggtgggg taggggtcgg gactgaagac cggagtctgg agtctggagg
     3421 tactgctttc tgaggcggcc ctccgggccg cgccatttgt ctgtcttggg gccgctcatg
     3481 cggatcggcg ccgaactgaa ccttcaacgc gccgctctgc ggtgcatcag ggatctgtac
     3541 ctccagactc cagactccag ccgattcagc ttccctggct cagctccatc agcacgccgc
     3601 cggtctccgc cgggtggatg aaggccacgc ggcagccgtg ggcgccgttc ctcggggcct
     3661 ggtcgatcat gcggacgcct ttggccagca gagaggcgac agcctcatcg atgtcgtcca
     3721 cctcgaagca gacgtggtgg atgccgggac cccgcttcgc catgaacttg ccgatggggc
     3781 cctcgggatc cgtggtctcc aggaactcca gggtgctttc gcccacgggg aagaaggcgg
     3841 tcttcacctt ctgctccgcg acctcctccg tgtggtcggc ggccatgccg aacagccggg
     3901 ccatgcgggc catggcctcg tccaggcccg gagtggcgat gcccaggtgg ttgatgcgca
     3961 gcagttgcat gagggactcc cagggtcagt ttaggacgga gtctggagtc tggagtctgg
     4021 agtctggagg tactgctttc tgaggcggcc ctccgggcca cgccggtggc cacccttggg
     4081 ccgttcacat gggtcggcgc cgaactggac cttcaacgcg ccgcacagcg gcgcatcagg
     4141 gatctgtacc cccagactcc agactccaga ctccagccta aatgacggtg tgcttcccgg
     4201 agttcgggaa gacctccttc gcgcagtcgg ggcagatgcc gtgggtgaat tcggcatcgg
     4261 tgtgctcgtt ca
//
LOCUS       DASUDT010000235         3581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_983431, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000235 DASUDT010000000
VERSION     DASUDT010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983431"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..2168
                     /locus_tag="VFV26_04885"
     CDS             213..2168
                     /locus_tag="VFV26_04885"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX4845532.1"
                     /translation="MRRILLLRGAELIVFAFLATIPLLVVNPYALGLLTLLAIYGILL
                     IGLDVTVGYLGQVNLAQVAFLGLGAYAAGLAVTTFGLGMIPALAAAMAVGLLLGALIA
                     LPALRLEGPQFALATLSFAALSTTALNELEGITGGAQGLSLTRPPLFGHALTPPVFYW
                     LCMILLALVWMLMRNLLSSQWGRAFEALRDSPIATDAMGVGTYYHKVAAFALGSGLGG
                     LAGGLYAFNFQYLQPQSFTYDLMIILLLGVVLGGRKSLWGAFVGASVIVLLPNLLSNR
                     TLFQVFSGAGFALALAAGLRGLVRKTTRPFQAFAPVAAMGLLVAGGFLVENTEDWRKG
                     IFALMLFSVVVGLPEGIMGFLTLFLARLFRVPPSPLPAPSDLEAVLPPRSRGDAPLLV
                     LDDLKRHFGGVKAVDGLSMQVRAGTIHGLIGPNGSGKSTVVNVISGLYTPTSGKLSLH
                     GAALPEGSLNRVARAGVARTFQNLQLFGELTALENVMVALKDVYKVPLPLVLLGLSRA
                     EERRAQADALALLDLIGLRDQARARARDLTYGAQRFLEIARALARRPDLLILDEPAAG
                     LAHPDVLQQIEIIKRVNARGITIILIEHHMDVVSELCDTVTVMDGGKVIAEGAPEVVK
                     RHPKVIEAYLGQASDSGPTGGPVPQPA"
     gene            2180..2896
                     /locus_tag="VFV26_04890"
     CDS             2180..2896
                     /locus_tag="VFV26_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015605179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845533.1"
                     /translation="MLVVEDLHAGYGASEVLAGVSLTVRQGAVVALIGANGAGKTTTM
                     RAISGILRPSRGRITLDGKDVQGLDASRIARLGLAHAPEGRKVFGPLSVEDNLLLGAY
                     ARLPRFLGYKAAAQADLDRVYELFPRLKDRIRQPAGTLSGGEQQMLAIGRALMARPKA
                     MLLDEPSMGLAPVIVQEVFRTIRRLKEAGITLLLVEQFAKSALEVADYAYVMERGRIA
                     VEGTPEELGRNERVLAAYLG"
     gene            2944..3018
                     /locus_tag="VFV26_04895"
     tRNA            2944..3018
                     /locus_tag="VFV26_04895"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2976..2978,aa:Gly,seq:ccc)
     gene            complement(3093..>3581)
                     /locus_tag="VFV26_04900"
     CDS             complement(3093..>3581)
                     /locus_tag="VFV26_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845534.1"
                     /translation="EEMAAERRLLAQKPVLDDQGEEIVLTLSQRVARLRTNQKIMLAI
                     KGGKEERTLLIREANRLIQVNVMRNGRITEGEVAYIAQMRTVNEEVLRIIASNREWMK
                     KYPVTKALVLNPRTPLPVAMTHFKRLIESDMKLLMKDRNVAELLRREAKRYLEMKAVG
                     KG"
BASE COUNT          487 a         1308 c         1152 g          634 t
ORIGIN      
        1 gggaccgcag ggcaacgtgg ttcgttgttc aagggccctg acgccgcggg gcgcatggct
       61 ggccccaacc cgaagggcgc caggtggcgg gtggctcgat cctgcgtcag cctcggttcg
      121 cgtagaccca ctacgctgga acctcgactt ccttggctcg cttgcccggc acctggcgcg
      181 cggccgcgcc ccactgagaa atgggctctt taatgcggcg aatcctcctc ctccgcggcg
      241 ccgaactcat cgtcttcgcc ttcctcgcca ccatccccct gctggtggtg aatccctacg
      301 ccctgggcct gctgaccctg ctggccatct acggcatcct cctcatcggg ctggatgtca
      361 ccgtgggcta cctgggccag gtgaacctcg cccaggtggc cttcctgggc ctgggcgcct
      421 acgcggcggg cctcgcggtc acgacgttcg gactcggcat gatcccggcc ctggccgcag
      481 ccatggccgt gggcctgctc ctgggcgccc tcatcgccct gcccgccctg cgcctcgaag
      541 gcccccagtt cgccctggcc accctcagct tcgccgccct cagcaccacg gccctcaacg
      601 aactggaagg catcactggc ggcgcccagg gcctcagcct cacacgtccg cccctgttcg
      661 gccacgccct cacgcccccg gtcttctact ggctgtgcat gatcctgctg gccctggtct
      721 ggatgctgat gcggaacctg ctctcttccc agtggggccg ggccttcgag gccctgcgtg
      781 acagccccat cgccacggac gccatgggcg tgggcaccta ctaccacaag gtggccgcct
      841 tcgccctggg ctcagggctg ggcggactcg cgggcggcct ctacgccttc aacttccagt
      901 atctccagcc ccagagcttc acctacgacc tcatgatcat cctcctcctg ggcgtggtgc
      961 tgggcgggcg caagagcctc tggggcgcct tcgtgggcgc ctcggtcatc gtcctgctgc
     1021 ccaacctgct gtccaaccgt acgcttttcc aggtcttcag cggggccggc ttcgcgctgg
     1081 ccctggccgc ggggctgcgg ggcctggtga ggaagaccac gcgccccttc caggccttcg
     1141 cccccgtggc ggccatgggg ctgctggtcg ccggcggttt cctcgtggag aacaccgagg
     1201 attggcgcaa gggcatcttc gcgctgatgc tcttctccgt ggtggtgggc ctgcccgagg
     1261 gcatcatggg cttcctcacc cttttcctgg cgcggctgtt ccgcgtgccg ccgtcccccc
     1321 ttccggcacc ttcggatctg gaggctgtgc tgccgccgcg ttcccggggg gacgcgcccc
     1381 tgctggtcct ggatgacctc aagcggcatt tcggcggcgt gaaggccgtg gatggcctgt
     1441 ccatgcaggt gcgcgccggc accatccacg gcctcatcgg gcccaacgga tccggcaaga
     1501 gtacggtggt gaatgtcatc tccggcctct acacacccac ctccgggaag ctgtccctcc
     1561 acggcgccgc cctgcccgaa ggcagcctca accgcgtggc ccgcgccggc gtggcgcgga
     1621 cgttccagaa cctgcagctc ttcggcgagc tcacggccct cgagaacgtg atggtggccc
     1681 tgaaggacgt ctacaaggtg cccctgcccc tggtgctgct gggcctctcc cgggcggagg
     1741 agcgccgcgc ccaggccgat gccctcgccc tgctggacct catcggccta agggatcagg
     1801 cccgtgcccg cgccagggac ctcacctatg gcgcccaacg cttcctggag atcgcccggg
     1861 ccctggcccg caggcccgac ctcctgatcc tcgacgaacc cgccgcgggg ctggcccatc
     1921 cggatgtcct ccagcagatc gagatcatca agcgggtcaa cgcccggggc atcaccatca
     1981 tcctcatcga gcaccacatg gatgtggtga gcgagctttg cgacacggtg accgtcatgg
     2041 acggcggcaa ggtcatcgcc gaaggcgccc cggaggtggt gaagcggcat cccaaggtca
     2101 tcgaggccta cctgggccag gccagcgact ccgggcccac cggcggcccc gtgccgcagc
     2161 ccgcgtgaag gagactggca tgctcgtcgt cgaggatctt catgcggggt acggcgccag
     2221 cgaggtgctt gcgggcgttt cgttgaccgt gaggcagggc gccgtggtgg ccctcatcgg
     2281 cgccaacggc gccggcaaga ccaccaccat gcgggccatc tcgggcatcc tccgcccctc
     2341 ccgcggccgc atcacgctgg atgggaagga tgtccagggc ctcgatgcct cgcgcatcgc
     2401 ccgcctgggc ctcgcccatg cgccggaggg ccgcaaggtc ttcggccccc tgtccgtgga
     2461 ggacaacctg ctcctgggcg cctacgcccg cctgccccgc ttcctcgggt acaaggccgc
     2521 cgcccaggct gatctggacc gcgtctacga actcttcccc cgcctcaagg accgcatccg
     2581 ccagcccgcc ggcaccctgt ccggcggcga gcagcagatg ctggccatcg gccgggccct
     2641 catggcccgc cccaaggcga tgctgctgga cgagccctcc atgggcctcg cgccggtcat
     2701 cgtccaggag gtcttccgca ccatccgccg cctcaaggag gccggcatca ccctcctgct
     2761 ggtggaacag ttcgccaaga gcgccctcga agtcgccgac tacgcctacg tcatggagcg
     2821 gggccgcatc gccgtggaag gcacgccgga agagctggga cggaacgagc gggtgctggc
     2881 ggcctatctg ggctgagcgg ggctggcccg gcgccgggcc ttgaggtagg atgattccct
     2941 gccgcgggcg tagttcagtg gtagaacgtc agcttcccaa gctgaatgtc gtcggttcaa
     3001 tcccgatcgc ccgctccaaa tgcaaaaggc cccgactggg gccttttgca tttggagttg
     3061 gaagaaggat gggaccggaa cggacgaagg gcctacccct tccccaccgc cttcatctcg
     3121 agataccgct tggcctcccg gcgcagcagc tcggccacgt tgcggtcctt catcagcagc
     3181 ttcatgtcgc tttcgatgag ccgcttgaag tgcgtcatgg ccacggggag gggggttcgc
     3241 gggttcagga ccagggcctt ggtgaccggg tacttcttca tccactcgcg gttgctggcg
     3301 atgatgcgca gcacctcctc gttgaccgtg cgcatctggg cgatgtaggc cacctcgcct
     3361 tcggtgatgc ggccgttccg catgacgttc acctggatga ggcggttggc ctcgcggatg
     3421 agcagggtgc gctcctcctt gccgcccttg atggcgagca tgatcttctg gttggtcctg
     3481 agcctcgcca cgcgctgcga tagggtgagg acgatctcct cgccctggtc atccagcacg
     3541 ggcttctggg ccagcaggcg gcgctcggcg gccatctcct c
//
LOCUS       DASUDT010000236         4060 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_321003, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000236 DASUDT010000000
VERSION     DASUDT010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321003"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..815)
                     /locus_tag="VFV26_04905"
     CDS             complement(30..815)
                     /locus_tag="VFV26_04905"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX4845535.1"
                     /translation="MADFDPWDPYRDLRFAGTREHPEHGACFIAEGRILVEDLLAAGR
                     AGRLRVVSVAATTPAAEAARALLPEGTELLTAEPAALSELAGFAFHRGLMACAQVPPP
                     PPVEALRKARRLLVLPRLYDGENLGLLLRSAAALGLDGVLAGPGPGLWSRRTVRVSMG
                     AVWRIPVWRVEDPWALLADWKAVEPGSEVVAAALSPEAGDARNWQPSSRCALVMGSED
                     TGLDAAQLAHCDRSVAIPMASGMDSLNVAAAGAILMFRMAAPD"
     gene            893..2497
                     /locus_tag="VFV26_04910"
     CDS             893..2497
                     /locus_tag="VFV26_04910"
                     /EC_number="1.14.16.-"
                     /inference="COORDINATES: protein motif:HMM:NF010657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0009072 - aromatic amino acid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid hydroxylase"
                     /protein_id="HEX4845536.1"
                     /translation="MSPAPNLPSPTQRAIDRLPAHLRRYVAGQDHGAYTPRDHAVWRH
                     ILHRLADRLKDTAHASYLSGLAATGIGLERIPSLDEMNLKLEGLGWSAVGVRGFIPPA
                     VFTELQSLGVLAIAADIRSHEHIEYTPAPDIVHESAGHAPFLADRRYADYLKRCGEAG
                     FRAIASVEDQAVYEAIRNLSVVKEDPEATEAEVHLAEERLRAASTSRRYVSESTKASR
                     LYWWTAEYGLVGDLADPKLYGAGLLSSLGEAAHCLTSAVRRVPLSLACADTEYDITRM
                     QPQLFVARDFDHLFEVLDAFEATLSWRRGGDHGLEEALRARTVNHLGLEGGIEVTGKV
                     VARIPARGPLAPGLATALVRVEGPVLLSRNGQAEGGPWPGEALVAFGRGALPHRGPFS
                     LDLPSGLFLTGFRVGEHEVINLRGHQDGRPLDLPSWALLVLSEGLPSVAGGPADPGAW
                     DRWYGGQGGFAEGEAESQARARKAASLPPGLADLYLEARTLREGEADAARLRALAAKA
                     RAYPGEWLLQAELAELESALAQEVKP"
     gene            2494..2739
                     /locus_tag="VFV26_04915"
     CDS             2494..2739
                     /locus_tag="VFV26_04915"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX4845537.1"
                     /translation="MTWIEQNGCLVREFKTPDFLTAFRLVTAVVEPSEELNHHPDITF
                     GWGHVRIALTTHDEGGITEKDQQLANRIDAAVQTLGL"
     gene            2808..3476
                     /locus_tag="VFV26_04920"
     CDS             2808..3476
                     /locus_tag="VFV26_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845538.1"
                     /translation="MLKTQTPLRLSPAFLSKAFPVAVAAGLLALGLGCNRDQVGHYRV
                     PKEGAIADHPDHPGHADHAAPAQGMPPAGGEVAPPPKPSAQGALKWSLPKGWSEVPGE
                     GMRYATFTTPVAGKVEATVVVLPGPAGGELANVNRWRGQIQLGPIDEKALAAARVAVK
                     SKAGTLNVYDFTSEGQAKSRMVVGLIATPDGNTWFLKLTGDAGSVAKAKPDFMRILES
                     LRLA"
     gene            3469..>4060
                     /locus_tag="VFV26_04925"
     CDS             3469..>4060
                     /locus_tag="VFV26_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845539.1"
                     /translation="MLKTLASRTWTFLKSFQLTIVLLSLLMLLVVFCTLAQVEMGTAG
                     AVNAYMRSFFVWRHFSFLPFPIPTFPGGGLVGLLLTLNLIAKTMDIQRTWAKAGMWLV
                     HAGMVILFAGEFVAGMMQVDTNMSIEVGQTVNYVESYKTMELAVVDVTDPAWDEVYSV
                     PDTMLARGGTIAIPGTPITLNVKKHHANSELSALPPG"
BASE COUNT          631 a         1506 c         1337 g          586 t
ORIGIN      
        1 cttcaccgtg actgtctcct acccctgaat cagtccggcg cggccatgcg gaacatgagg
       61 atcgccccgg cggcggccac gttcaggctg tccatgcccg aggccatggg aatggccacg
      121 gaccggtcgc agtgggccag ctgggcggcg tccaggcccg tgtcctcgga gcccatcacc
      181 agggcgcagc gggaagaagg ctgccagttc cgggcatccc cggcctcggg cgaaagggcc
      241 gcggccacga cctccgaccc cggctccacg gccttccagt ccgccagcag cgcccaggga
      301 tcctccaccc gccacacggg gatgcgccac acggctccca tggagacccg aactgtgcgg
      361 cggctccaga ggccggggcc cggccccgcg agcactccgt ccagccccag ggccgcggcg
      421 ctgcgcagca gcaggcccag gttctcccca tcgtagagcc gcggcaggac gagcagccgc
      481 cgggccttcc ggagggcctc cacgggcggc ggcggcggca cctgggcgca ggccatgagg
      541 ccccggtgga aggcgaagcc cgccagctcc gacagggccg cgggctcggc cgtcaacagc
      601 tcagtcccct cgggcagcag cgcccgcgcc gcctcggccg ccggggtggt cgcggccaca
      661 gacaccaccc gcagccgtcc ggcgcggccc gccgcgagca ggtcctccac caggatccgc
      721 ccttcggcga tgaaacaggc gccatgctcc ggatgctccc gcgtcccggc gaagcgcagg
      781 tcgcggtagg ggtcccaggg atcgaagtcg gccatgggac cagggtagct cttggcccgg
      841 aaatcccggg atccggaata tccggccatt gatttcagat tagacttcaa tgatgtcccc
      901 ggctccgaac ctcccctccc ccacccagcg cgccatcgac cggctgccgg cccacctgcg
      961 ccgctatgtg gcgggccagg accacggtgc ctacacgccc agggaccatg cggtctggcg
     1021 gcacatcctc caccgcctcg cggaccggct gaaggatacg gcccacgcca gctacctgtc
     1081 gggcctggcg gccacgggca tcggcctgga gcggattccc agcctggacg agatgaacct
     1141 gaagctggag ggcctgggct ggtccgccgt gggcgtgcgg ggcttcatcc ccccggccgt
     1201 gttcacggag ctccagtccc tgggcgtgct ggccatcgcc gcggacatcc gcagccacga
     1261 gcacatcgag tacaccccgg ccccggacat cgtccacgaa agcgcgggcc acgcgccctt
     1321 cctggcggac cgccgctacg cggactacct gaagcgctgc ggcgaggcgg gcttccgcgc
     1381 catcgcctcc gtggaggatc aggcggtcta cgaggccatc cggaacctca gcgtggtgaa
     1441 ggaggacccc gaggccacgg aggccgaggt ccacctggcg gaggagcgcc tgcgggccgc
     1501 ctccaccagc cgccgctacg tgagcgaaag caccaaggcc agccgcctct actggtggac
     1561 cgccgaatac ggcctggtgg gcgatctggc agatcccaag ctctacggcg cgggactcct
     1621 cagcagcctg ggggaggcgg cccactgcct cacatccgcc gtccggaggg tgcccctcag
     1681 cctcgcctgc gcagacaccg agtacgacat cacccgcatg cagccccagc tcttcgtggc
     1741 ccgggacttc gaccacctct tcgaagtgct ggacgccttc gaggccaccc tcagctggcg
     1801 ccgcggcggg gaccatggcc tggaggaggc cctgcgggcc cggaccgtga accacctggg
     1861 gctggagggc ggcatcgaag tcacgggcaa ggtggtggcg cggatccccg cccgcggtcc
     1921 gctggcgccg gggctcgcca ccgccctcgt gcgggtggag ggccccgtgc tgctgtcccg
     1981 gaacggccag gcggaaggcg gcccctggcc cggcgaggcc ctggtggcct tcgggcgcgg
     2041 cgccctgccc caccgcggcc ccttcagcct ggatctgcct tcggggctct tcctcacggg
     2101 cttccgggtg ggcgagcacg aagtgatcaa cctgcggggc caccaggatg gccgccccct
     2161 ggacctgccc agctgggccc tgctggtgct cagcgaaggc ctgccctccg tggcgggggg
     2221 accggccgat cccggtgcct gggaccgctg gtacggtggc cagggaggtt tcgccgaagg
     2281 cgaggccgaa tcccaggccc gggcccgcaa ggccgcctcc ctgcccccgg gcctggcgga
     2341 cctctacctg gaggcccgga ccctgcgcga aggcgaagcc gatgcagcgc gcctgcgggc
     2401 cctggccgcc aaggcccgag cctaccccgg cgagtggctg ctgcaggcgg aactggcgga
     2461 actcgaatcc gccctggccc aggaggtgaa gccatgacct ggatcgaaca gaacggatgc
     2521 ctcgtccggg agttcaagac gccggatttc ctcaccgcct tccgccttgt gaccgccgtg
     2581 gtggaacctt ccgaggaact gaatcaccac cctgatatca cctttggctg gggccatgtg
     2641 cgcatcgccc tgaccaccca tgacgagggg ggtatcaccg agaaagatca acaattggcc
     2701 aatcgcatcg atgcggctgt ccagacattg ggcctgtgat ctttgtccaa tgtcacctgt
     2761 cttcctactg gaaggtccta tatcctgaag tgtctttgag gatccccttg ttgaaaaccc
     2821 agacgcccct ccgactgtcc cctgccttcc tctcaaaggc ctttcccgtg gcggtcgcgg
     2881 ccgggcttct ggccctgggc ctcggctgca accgcgatca ggttggccac taccgggtgc
     2941 ccaaggaagg cgccattgcg gatcacccgg accatccggg ccacgccgac cacgcggcgc
     3001 ctgcccaggg catgcccccg gccggcggcg aggtcgcacc gccgcccaag ccctccgccc
     3061 agggggcttt gaagtggtcc ctgcccaagg gctggagcga ggtccccggc gagggcatgc
     3121 gctacgccac cttcacgact ccggtggccg gcaaggtcga ggccacggtg gtggtcctgc
     3181 cgggccccgc gggcggcgag ctggccaacg tgaaccgctg gcgcggccag atccagctgg
     3241 gccccatcga tgagaaggcc ctggccgccg cccgcgtggc ggtcaagtcc aaggccggca
     3301 ccctgaatgt ctacgacttc accagcgagg gacaggccaa gagccgcatg gtggtcggcc
     3361 tcatcgccac cccggacggg aacacctggt tcctgaagct gacgggcgac gccggatccg
     3421 tcgccaaggc caagcctgac ttcatgcgca tcctggagag cctccgcctt gcttaagaca
     3481 ctcgcctccc gcacctggac cttcctcaag tccttccagc tgaccatcgt gctgctgagc
     3541 ctgctcatgc tgctcgtggt gttctgcacc ctggcccaag tggagatggg caccgccggc
     3601 gccgtgaatg cctacatgcg cagcttcttc gtatggcggc atttcagctt cctgcccttc
     3661 cccatcccga ccttcccggg cggcggcctg gtgggcctcc tcctcaccct caacctcatc
     3721 gccaagacca tggacatcca gcgcacctgg gccaaggcgg gcatgtggct ggtccacgcg
     3781 ggcatggtga tcctcttcgc cggcgagttc gtggccggga tgatgcaggt ggacaccaac
     3841 atgtccatcg aggtgggcca gaccgtcaac tacgtggaga gctacaagac catggagctg
     3901 gccgtcgtcg atgtcaccga tcccgcctgg gatgaggtct actcggtgcc ggacacgatg
     3961 ctggcccggg gaggcaccat cgccatcccc ggcacgccca tcaccctgaa cgtcaagaag
     4021 caccacgcca actccgagct ttcggccctc cccccgggga
//
LOCUS       DASUDT010000237         2247 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1535880, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000237 DASUDT010000000
VERSION     DASUDT010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1535880"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VFV26_04930"
     CDS             <1..991
                     /locus_tag="VFV26_04930"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX4845540.1"
                     /translation="RYLNNPTRPMLNRAIQGIYAPGSTFKLLVALAALEKGIATAQTA
                     VYCAGKKNYYGRDFRCDKLSGHGTLSMVQAIAQSCDVYFYELAARMDVDDIHATAEKY
                     GLTDRTDVDLPQEKRTRIPSRAWKRKAVPKDPKWYAGETISVGIGQGAVGVTPIGLAR
                     FYAVLATRGKLLTPHLFYGFRGDQGNELEPAPVAPPRDTPLDPRHWSILDEGLFEVMR
                     SGTARGSALKEITMAGKTGTAQVATFVDRAHYVRQAKHLKDHALFAGYAPHEKPQIAF
                     AVVVENAGFGADMAAPIAKKLVQYWFLDRLKSPLPPPRGRMVDPFAPAPEAAE"
     gene            988..2073
                     /gene="rodA"
                     /locus_tag="VFV26_04935"
     CDS             988..2073
                     /gene="rodA"
                     /locus_tag="VFV26_04935"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEX4845541.1"
                     /translation="MKDRVRALDSRLLWVILALTVLGTLTLYSAGRNTPQAAIWLKQS
                     LWNLMGMALMLLLATTDPRRIFRHSFLAYLVGLVALAAVLVVGKKIGGATRWFVVAGQ
                     TFQPSELMKWVTLLYVSQRLGSRPADSVGRLELLGAVGLVAFPMLLIHRQPDLGMALS
                     FLPILLLIPLMKGLRARWVVVLLLLTTLGGFAAWKTVLKPYQKQRVRIFLDPSSDLQG
                     KGYQVNQSRIAIGAGGLVGKGFTSGSQTQLNFLPVKTTDFAFSVWAEERGFIGVLIAL
                     GLFGLLLSRILDAAKAAHTNAEAYFCAGAAGIFALHLMVNVGMVAGALPNKGMVLPFF
                     SAGGSSTLSFFLALGLIMGILHRSRVK"
BASE COUNT          360 a          793 c          734 g          360 t
ORIGIN      
        1 ccgctacctg aacaacccca cgcgccccat gctgaaccgg gccatccagg gcatctacgc
       61 gccgggttcc accttcaagc tgctggtggc cctggcggcc ctggaaaagg gcatcgccac
      121 tgcccagacg gcggtgtact gcgcggggaa gaagaactac tacggccggg atttccgctg
      181 cgacaagctg agcggccacg gaaccctgtc catggtgcag gccatcgccc agagctgcga
      241 tgtgtacttc tatgagttgg ccgcccgcat ggatgtggat gacatccacg ccacggcgga
      301 gaagtacggg ctcacggacc gcacggatgt ggacctgccc caggagaagc gcacccgcat
      361 ccccagccgc gcctggaagc gtaaggccgt gcccaaggat cccaaatggt atgcgggcga
      421 aaccatcagc gtgggcatcg gccagggcgc ggtgggcgtg acccccatcg gcctggcgcg
      481 cttctacgcg gtgctggcca ccagggggaa gctgctcacg ccccatctgt tctacggatt
      541 ccggggggac cagggcaacg agctggaacc cgcgccggtg gcgccccccc gggacacgcc
      601 gctggacccc aggcactggt ccatcctgga tgagggcctt ttcgaagtga tgcggagcgg
      661 caccgcccgg ggatcggccc tcaaggagat caccatggcc gggaagaccg gcaccgccca
      721 ggtggccacc ttcgtggacc gggcccacta cgtccgccag gccaagcacc tgaaggacca
      781 cgcgctgttc gcaggctatg ccccccacga gaagccccag atcgccttcg ccgtggtggt
      841 ggagaacgcg ggcttcggcg ccgacatggc cgctcccatc gcgaagaagc tggtgcagta
      901 ctggttcctc gaccgcctga agagtcccct gcccccgccg cgcgggcgca tggtggatcc
      961 cttcgccccg gcgccggagg cggcggaatg aaggaccgcg tccgcgccct ggattcccgc
     1021 ctgctgtggg tcatcctggc cctcacggtg ctggggacgc tgaccctcta ctccgcaggc
     1081 cggaacacgc cccaggcggc catctggctc aagcagagcc tctggaacct catgggcatg
     1141 gccctgatgc tgctgctggc caccacggat ccccgccgca tcttccggca cagcttcctg
     1201 gcctacctgg tgggcctcgt ggccctggcg gcggtgctgg tggtgggcaa gaagatcggc
     1261 ggcgccaccc gctggttcgt ggtggcgggg cagaccttcc agccttcgga actgatgaag
     1321 tgggtgaccc tgctctacgt gtcccagcgg ctgggctccc ggcccgcgga ctcggtgggc
     1381 cggctggaac tcctgggtgc cgtgggcctg gtggccttcc ccatgctgct catccaccgg
     1441 cagcccgacc tcggcatggc cctcagcttc ctgcccatcc tcctgctcat cccgctgatg
     1501 aaggggctgc gggcacgctg ggtcgtggtc ctgctcctgc tcaccaccct gggtggattc
     1561 gccgcctgga aaaccgtcct caagccctac cagaagcagc gggtgcgcat cttcctggac
     1621 ccctccagcg acctccaggg caagggctac caggtgaacc agagccgcat cgccatcggg
     1681 gccggcggcc tcgtcggcaa gggcttcacc agcggctccc agacccagct gaactttctc
     1741 cccgtgaaaa ccacggattt cgccttcagc gtgtgggcgg aggaacgggg cttcatcggc
     1801 gtcctgatcg cgctgggcct cttcggcctc ctgctgagcc gcatcctgga tgccgccaag
     1861 gccgcccaca ccaatgccga ggcctatttc tgcgccgggg ccgcgggcat cttcgccctg
     1921 catctgatgg tgaacgtggg catggtggcc ggcgccctgc ccaacaaggg catggtgctg
     1981 cccttcttca gcgccggggg cagcagcacc ttgagtttct tcctggccct gggcctcatc
     2041 atgggcatcc tgcatcgatc gagggtgaag tgacagacct gcggcagcgc atgaaggagt
     2101 tggcggacca ggtgcggatg caccggcacc gctactacgt gctggaccaa ccggtggtct
     2161 ccgatgccga atacgacgcc ctggagcgcg agctgcggga actcgaagcg gcccacccgg
     2221 agctggcgga tcccaacagc cccacgc
//
LOCUS       DASUDT010000238         2723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1779002, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000238 DASUDT010000000
VERSION     DASUDT010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1779002"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VFV26_04940"
     CDS             complement(<1..678)
                     /locus_tag="VFV26_04940"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HEX4845542.1"
                     /translation="MTPPRTLLAYSAPRSGFGDEWMTFLPIGLGYLQAMLKSRAFPCR
                     VANLSGKGRKEILAYLKAQNPSVMGVSMFTFNRKRSYELLAWAREACPGAILLAGGPH
                     PTHLADEVFEDCPALDGIVQGEGEAVLLGIAERLRTAPGSDLWKRTPGLILREGRTLP
                     QPPLEDLDAIGIPAEHLEADFLNDVGQLAYLSTSRGCPATCNFCNTPEFWGTSIRFRS
                     APSVLREM"
     gene            756..1892
                     /locus_tag="VFV26_04945"
     CDS             756..1892
                     /locus_tag="VFV26_04945"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4845543.1"
                     /translation="MAGNLIRNPETIAEITARACGQHELMILVTPYLRFETSFLKLEG
                     TEIHAAATMGREDAMYGLRNAGLRLRFPHGVSFLEGPTQLRGFGMVEGRRTIRLALPA
                     ALQDDDHRAAYRVDRVGRVAATFSTPGLDLLAGTLVDISTTGARIFSPQGLGAAGLQP
                     GDEVMVTIPLIEGIRINTKAKVRHVQGRSFGVEYTPRLPEDVLEPLARWTFERREEDL
                     DRLASRGPRAVPGGGASAPAGLHSGLLLISLDQALEGALQDLLGGMQPLRRLAPAIPT
                     LKEALALHPALVLFHLPNLGLDERRRLKTMVELVQGRVPFLLLGTGMEGGPLLELGSE
                     LKAAVSIVFNPERAVFFQRLVLGVLRRTYEGGESPMVPLEPEAT"
     gene            1953..>2723
                     /locus_tag="VFV26_04950"
     CDS             1953..>2723
                     /locus_tag="VFV26_04950"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX4845544.1"
                     /translation="MSAAHEPAVTESLALELGLSKDEWQVILRLLDGRMPTYPELGVF
                     SAMWSEHCSYKSSRIHLKNLPTEGPRVIQGPGENAGVVDIGDGWAVAFKMESHNHPSF
                     IEPYQGAATGVGGILRDVFTMGARPLANLNSLRFGELDAPRMKGLVKGVAAGISGYGN
                     CMGIPMLGGDAAFDASYNGNILVNAFTLGVLRSDKIFKGFASGIGNKMMYIGSKTGRD
                     GIHGASMASAEFGEGSEEKRPTVQVGDPFTEKLLLEACL"
BASE COUNT          438 a          937 c          949 g          399 t
ORIGIN      
        1 catctcccgc agcaccgagg gcgcactgcg gaagcggatg gaggtgcccc agaattcggg
       61 cgtgttgcag aagttgcagg tggccgggca gccgcggctg gtgctgaggt aggccagctg
      121 ccccacgtcg ttgaggaagt ccgcctccag gtgctcggcg gggatgccga tggcatcaag
      181 gtcctccagg ggcggctggg gcagggtgcg gccctcccgg aggatgagcc ccggcgtccg
      241 cttccacagg tcggaacccg gagccgtcct caggcgctcg gcgatgccca gcagcacggc
      301 ctccccctcg ccctgcacga tgccatccag ggccgggcag tcctcgaaga cctcgtccgc
      361 caggtgggtg gggtgggggc cccccgccag caggatggcg ccggggcagg cctcccgggc
      421 ccaggccagc agctcatagg agcgcttgcg gttgaaggtg aacatggaga cgcccatcac
      481 cgatgggttc tgggccttca ggtaggccag gatctccttc cgccccttgc cgctgaggtt
      541 cgccacccgg caggggaagg cccgggactt gagcatggcc tgcaggtagc cgagaccgat
      601 gggcaggaag gtcatccatt cgtccccgaa accgctgcgg ggagcgctgt aggcgagcag
      661 ggtgcgggga ggggtcatgg ggtccgaaag cagagctttc cagtgtaggg aacggaatcc
      721 atgatggaag caggcattcc aaccacggag gaaacttggc cggaaacctg atccggaatc
      781 cggagaccat cgccgagatc accgcccggg cctgtggcca gcacgagctg atgatcctgg
      841 tgacccccta cctccggttc gagacctcct tcctgaagct ggagggcacc gagatccacg
      901 cggccgccac catgggccgg gaagacgcca tgtacgggct ccggaacgcg ggcctgcggc
      961 tgcggttccc ccatggggtg agcttcctgg agggccccac ccagctgcgg ggcttcggca
     1021 tggtggaggg ccgccggacc atccggctgg ccctgcccgc ggccctgcag gatgacgatc
     1081 accgcgccgc ctaccgggtg gaccgggtgg gccgcgtggc cgccaccttc agcacccccg
     1141 gcctcgacct cctggcggga acgctggtgg acatcagcac cacgggcgcc cggatcttca
     1201 gcccgcaggg cctgggggcg gccggcctcc agcccgggga cgaggtgatg gtcacgatcc
     1261 ccctgatcga aggcatccgc atcaacacca aggccaaggt ccgccatgtg caggggcgct
     1321 ccttcggcgt ggagtacacc ccccggctgc cggaggacgt gctggagccg ctggcccggt
     1381 ggaccttcga gcgccgggaa gaggacctgg accggctcgc ctcccgcggg ccccgggcgg
     1441 tccccggggg cggggccagc gccccggcgg gcctccattc ggggctgctg ctgatctccc
     1501 tggaccaggc cctggagggg gcgctccagg acctcctggg gggcatgcag cccctccgga
     1561 ggctggcgcc cgccatcccc accctcaagg aggccctggc cctgcacccc gccctggtgc
     1621 tcttccacct gcccaacctg gggctggacg agcggcggcg cctcaagacc atggtggaac
     1681 tcgtccaggg gcgcgtcccc ttcctccttc tgggcacggg catggagggc ggacccctgc
     1741 tggagctggg ctcggaactg aaagccgcgg tctccatcgt gttcaacccg gagcgggccg
     1801 tcttcttcca gcgcctcgtc ctgggcgtgc tccgccggac ctacgaaggc ggggaatcgc
     1861 ccatggtgcc cctggaaccc gaagcgacct gaggatgtca agcctcgttc agagtccgcg
     1921 aaaccgctag aatcaaggct tccggagcct ccatgtccgc tgcgcacgaa ccggccgtca
     1981 ccgaatccct ggccctggag ctgggcctct ccaaggacga gtggcaggtc atcctgcgcc
     2041 tcctggatgg tcggatgccc acgtacccgg agctgggcgt gttcagcgcc atgtggagcg
     2101 agcactgctc gtacaagtcc agccgcatcc acctgaagaa cctgcccacg gaaggccccc
     2161 gcgtcatcca gggtcctggc gagaacgcgg gcgtggtgga catcggcgac ggctgggccg
     2221 tggccttcaa gatggagagc cacaaccacc cgagtttcat cgagccctac cagggcgcgg
     2281 ccacgggcgt gggcggcatt ctccgcgatg tgttcaccat gggcgcccgg cccctggcca
     2341 acctgaacag cctgcgcttc ggggaactcg acgcgccgcg catgaagggg ctcgtcaagg
     2401 gcgtggccgc gggcatctcc ggctacggca actgcatggg catccccatg ctgggcggcg
     2461 atgcggcctt cgacgccagc tacaacggca acatcctcgt gaatgcattc accctgggcg
     2521 tgctgcgcag cgacaagatc ttcaagggct tcgcctccgg catcggcaac aagatgatgt
     2581 acatcggctc caagacgggc cgcgatggca tccacggcgc cagcatggcc tcggcggagt
     2641 tcggcgaagg cagcgaggag aagcgcccca cggtgcaggt gggcgatccc ttcacggaga
     2701 agctgttgct cgaagcctgc ctg
//
LOCUS       DASUDT010000239         2717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_939624, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000239 DASUDT010000000
VERSION     DASUDT010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939624"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /gene="nrfD"
                     /locus_tag="VFV26_04955"
     CDS             <1..831
                     /gene="nrfD"
                     /locus_tag="VFV26_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX4845545.1"
                     /translation="DLASLRDRTTHKVKKVIYTAVSLGWRGAARHWQHYEKAYLLLAG
                     LATGLVLSVHSVVSFDFATSVVPGWHMTIFPPYFVAGAIFAGFAMVVMVLVVVRETME
                     LKNLITMRHLDVMNKVVLAMSCIMGYSYLMEGFTAWYSMNEYLHHGFMNIITGTYGWA
                     GWITISCNILIPQILWFKKARASYFWMILVAIGVTVGMWFERFVIIVISLHQDYLPSA
                     WRIYKPTMTDFGILLGTFGLFFTLVLLFARVLPVIATTEVKAILPDAQPSHHGDDHHA
                     "
     gene            824..1966
                     /locus_tag="VFV26_04960"
     CDS             824..1966
                     /locus_tag="VFV26_04960"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol:electron acceptor oxidoreductase subunit
                     ActD"
                     /protein_id="HEX4845546.1"
                     /translation="MPETSYAVLGVFETPDALMKAIPKVRASQLGTVEAYTPYPIHGI
                     DEALGLRKSPLGGMVLVMGILGALTAFGFQYWISAVDYPIITGGKAVGSWEAFIPIMF
                     EVTVLFATFTAGLGMLLLLNRLPFFGHPVLSSKAITGITRDRYALALEAENEAFDASA
                     AARALQEAGATEVEILPAPDRSPFLTSDYILRVAGGIFTACLGAGLVMYFAIKLFPVL
                     APMKYMQDQPRLNAQKPSSFFKDGHGMQRPVAGTVARGHLPTATGTQDESAALVNPLP
                     RTKEIFAVGRQAYKNRCEVCHGAVGDGMGSLTAAYGAKPANLHAQQFRDYPDGKIYWA
                     IVNGKNAMPSHAADLSEPQRWAVVHYVRALQRAQNAKDEDLKVVAP"
     gene            1963..>2717
                     /locus_tag="VFV26_04965"
     CDS             1963..>2717
                     /locus_tag="VFV26_04965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845547.1"
                     /translation="MSQAKHTANLLWGAVALGALGVAGSYAAAGPERFWANWVMWFVL
                     LFTLGLGALFIVALEHLVNAKWSVPVRRIPERLATLLIPAVPVGLIALAAVPVLYPGA
                     RPEAAHHPILAGKAFWLSLPFFSVRTLIAFALCLLALWMLVGGSLKQDATKDPAFNLR
                     ARKFAPAFMAIFALVITLVAFDWLSGLTPEWYSDIFGVYIFAGAFLSGLAATALAVLS
                     LQDQGRLDGVRGDHLYNLGGFLFAFTVFWSYIG"
BASE COUNT          408 a         1019 c          808 g          482 t
ORIGIN      
        1 gacctcgcct ccctgcgcga ccgcacgacc cacaaggtga agaaggtcat ctacaccgcc
       61 gtcagcctcg gctggcgcgg cgcggcccgg cactggcagc actacgagaa ggcctacctg
      121 ctgctggcgg gcctggccac gggcctggtg ctctccgtgc actcggtggt gagcttcgac
      181 ttcgccacct ccgtggtgcc cggctggcac atgaccatct tcccgcccta cttcgtggcg
      241 ggcgccatct tcgccggctt cgccatggtg gtgatggtgc tggtggtcgt gcgcgagacc
      301 atggagctga agaacctcat caccatgcgc cacctggacg tgatgaacaa ggtggtgctc
      361 gcgatgagct gcatcatggg ctacagctac ctgatggaag gcttcacggc ctggtattcc
      421 atgaacgagt acctccacca cggcttcatg aacatcatca cgggcaccta cggctgggcc
      481 ggctggatca ccatcagctg caacatcctc attccccaga tcctctggtt caagaaggcc
      541 cgcgccagct acttctggat gatcctcgtg gccatcggcg tcacggtggg catgtggttc
      601 gagcgcttcg tgatcatcgt gatctcgctg caccaggact acctgccctc cgcctggcgc
      661 atctacaagc ccaccatgac ggacttcggc atcctgctgg gcaccttcgg gctcttcttc
      721 acgctggtcc tcctcttcgc ccgggtgctg ccggtcatcg ccaccaccga ggtgaaggcg
      781 atcctgccgg atgcgcaacc ctctcaccat ggagacgacc accatgcctg agacgtccta
      841 cgccgtcctc ggcgtcttcg agacgcccga cgccctgatg aaggccatcc ccaaggtgcg
      901 ggccagccag ctgggcaccg tggaagccta cacgccgtac cccatccacg gcatcgacga
      961 ggccctgggc ctccgcaagt cgcccctggg cggcatggtg ctggtcatgg gcatcctggg
     1021 cgccctcacc gccttcgggt tccagtactg gatcagcgcc gtcgactacc ccatcatcac
     1081 cggcggcaag gccgtgggct cctgggaggc cttcatcccc atcatgttcg aagtgacggt
     1141 gctcttcgcc accttcaccg cgggcctggg gatgctgctt ctgctgaaca ggctgccctt
     1201 cttcggacat ccggtgctct cgtcgaaagc catcacgggc atcacccggg accgctacgc
     1261 cctggccctg gaggccgaaa atgaagcctt cgacgcttcc gcggcggccc gggccctcca
     1321 ggaagcgggc gccaccgagg tggagatcct ccctgccccg gaccgcagcc ccttcctcac
     1381 cagcgactac atcctccgcg tcgccggggg catcttcacc gcctgcctgg gcgccggcct
     1441 ggtgatgtac ttcgccatca agctgttccc cgtgctggcc cccatgaagt acatgcagga
     1501 ccagccgcgc ctcaacgccc agaagccctc cagcttcttc aaggacggcc acggcatgca
     1561 gcgccctgtg gcgggcaccg tggcccgggg gcacctgccc acggccacgg gcacccagga
     1621 tgaatccgcc gccctggtga accccctccc ccggacgaag gagatcttcg ccgtgggccg
     1681 ccaggcctac aagaaccgct gcgaggtctg ccatggggcc gtgggcgacg gcatgggcag
     1741 cctgacggcc gcctatggcg cgaagcccgc caacctccac gcccagcagt tccgcgacta
     1801 cccggacggc aagatctact gggccatcgt gaacggcaag aacgccatgc cctcccacgc
     1861 cgcggatctc agcgagccgc agcgctgggc cgtggtgcac tacgtgcgcg ccctccagcg
     1921 ggcgcagaac gccaaggacg aagacctgaa ggtggtcgca ccatgagcca agccaagcac
     1981 accgccaacc tcctctgggg cgccgtggcc ctcggcgccc tgggcgtggc cggatcctac
     2041 gccgccgccg gccccgagcg cttctgggcc aactgggtga tgtggttcgt cctcctgttc
     2101 accctcggcc tgggcgccct tttcatcgtg gccctggagc acctggtgaa cgccaagtgg
     2161 agcgtgcccg tgcggcgcat ccccgagcgc ctggccaccc tgctgattcc cgccgtcccc
     2221 gtgggcctca tcgcgctggc cgccgtcccc gtgctctacc ccggcgcccg gcccgaggcc
     2281 gcgcaccatc cgatcctggc cggcaaggcc ttttggctga gcctgccctt cttttccgtg
     2341 cgcaccctca tcgccttcgc cctctgcctc ctggccctct ggatgctggt gggcggatcg
     2401 ctgaagcagg acgccacgaa ggatcccgcc ttcaacctcc gggcccgcaa gttcgccccg
     2461 gccttcatgg ccatcttcgc gctggtcatc acactggtgg ccttcgactg gctttcgggt
     2521 ctcacacccg agtggtacag cgacatcttc ggcgtctaca tcttcgccgg cgccttcctc
     2581 agcggcctgg cggccacggc cctcgcggtg ctgagcctcc aggaccaggg ccggctggac
     2641 ggcgtgcggg gcgaccacct ctacaacctc ggtggcttcc tcttcgcctt cacggtgttc
     2701 tggtcctaca tcggctt
//
LOCUS       DASUDT010000240         3461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_873394, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000240 DASUDT010000000
VERSION     DASUDT010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3461
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_873394"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VFV26_04970"
     CDS             complement(<1..882)
                     /locus_tag="VFV26_04970"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845548.1"
                     /translation="MDPRQRPLLHRRLGVLKALAWSLVASLILVYAWLQLVRHGEFKQ
                     LAMQQAVKVRPIAAPRGLVLDRNGHRLVDNRRALHLVIQREDLPTRPEEVEALALALE
                     LDPAALARKVQSYRVAGKGRPLVLKENLDEAGIALAERVRARYSFLSVDVAPRRVYLG
                     DELAGHVLGYVGEVDEELMKAKPGVFRLGETIGKEGFEASGNDKLKGVDGQKRILVDQ
                     LGTEVANFGQADAAPGRSLFLTLDAGLQKVLKDAYGEEAGAAVVLDLRDGGILAMYSS
                     PSYDPNLFLNRLSQEMVD"
     gene            complement(882..1370)
                     /locus_tag="VFV26_04975"
     CDS             complement(882..1370)
                     /locus_tag="VFV26_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845549.1"
                     /translation="MRIPAPPASRQNLLCAAALGLVFLCAPFPRAQSVIHVVLVLALA
                     PRVGAPLATALWAGAAGWALEGSLRLYPHLGGTAWADMSMALVAGGMAGRWPLEGLKG
                     WFARLAGLLALHTLLVHGAVRLASGPHAWGTGWLWAAFTLPLWGWAVWRLLYSGPAPR
                     LG"
     gene            complement(1367..2257)
                     /gene="mreC"
                     /locus_tag="VFV26_04980"
     CDS             complement(1367..2257)
                     /gene="mreC"
                     /locus_tag="VFV26_04980"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX4845550.1"
                     /translation="MTVHKSKWGWRHGAWHRPFLVILWLGHGGWVMLGPDPGRHWTGL
                     ADALSRPSQSLASRWEGWRHSRREAARSLEETRAENARLATELAQLRTQASQDGPRLA
                     EADAAVQLLGLKQQIPLELKAARVIFSTRPATFGGLILDRGADLGLVPDQGVLAPEGI
                     VGRLWSVGPTQAKILPADAPNASVAVMLMRSRATGVMQGMGSGRAQIRYISNQEVVQV
                     GEAVLTSGLDRVFPRGLLVGYVAEVAQGDLELKVQVNLSAPLDRISAVLLLPSQPPLE
                     VQPPFVAPQVPKPPRRRGMP"
     gene            complement(2275..3318)
                     /locus_tag="VFV26_04985"
     CDS             complement(2275..3318)
                     /locus_tag="VFV26_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX4845551.1"
                     /translation="MASFFSSQFWSNIFNSDLAIDLGTASTLIHTKQAGRIVIYEPSI
                     VAVNTVTHEVEAVGDEAKQLLGRAPQGVRTIRPMKDGMIFEVDAAEKMLAQFILKARP
                     NRGIARTRIVVSVPPRAHQVARRAVKQVCYDAKAGEVFLVDQTMVAAIGAGLAINEKR
                     GCMIVDIGGGTTDVAVISYNGKVFSDSILIAGDEMDEAVIKYIREKYNVLISEASAEE
                     VKWTLGSAFPSELTRTMEVSGRDQFEGLPKTLTLNDAEIREALAEPIGAIIDLVRKAL
                     NETPPQLAADLIDRGICLTGGGSLIQGLDERLRKETHLPVFRAEDPQTAVVRGTALLL
                     ENIPLLRRIQILD"
BASE COUNT          542 a         1241 c         1179 g          499 t
ORIGIN      
        1 gtccaccatc tcctggctga gccggttgag gaacaggttc ggatcgtacg aggggctgga
       61 atacatggcc aggatgcccc cgtcccgcag atccagcacc accgcggccc cggcctcttc
      121 gccgtaggca tccttcagca ccttctggag gcccgcatcg agcgtgagga agaggctgcg
      181 gcccggcgcg gcgtcggcct ggccgaaatt ggcgacctcc gtgcccagct ggtccacgag
      241 gatgcgcttc tggccatcca cgcccttgag cttgtcgttg ccgctggcct cgaaaccttc
      301 cttgccgatg gtctcgccca ggcggaagac gccgggcttg gccttcatca gctcctcgtc
      361 cacttccccc acgtagccca gcacgtggcc ggccagctcg tcccccaggt agacccgccg
      421 gggtgccaca tccacgctga ggaaggagta gcgggcgcgc acgcgctccg ccagggcgat
      481 gcccgcctcg tccaggttct ccttcagcac caggggccgc cccttgcccg cgacgcgata
      541 gctctggacc ttccgagcca gggccgcggg atccagttcc agggccagcg caagcgcttc
      601 cacctcttcg gggcgggtgg gcagatcctc ccgctggatg acgagatgca gtgcccggcg
      661 gttgtccacc aggcggtggc cgttgcggtc cagcaccagc ccccgggggg cggcgatggg
      721 acgcaccttc accgcctgct gcatggccag ctgcttgaac tcgccgtgcc gcaccagctg
      781 gagccaggca tagacgagga tcagcgaagc caccaggctc caggccaggg ccttgaggac
      841 cccgagccgg cggtggagga ggggacgctg ccgcggatcc atcagcccag ccgaggcgca
      901 ggtccggagt acaacaggcg ccacacggcc cagccccaca ggggcagggt gaaggccgcc
      961 cacagccagc cggtgcccca ggcatgggga cccgaggcca ggcgcacggc gccatggacc
     1021 agcagagtgt gcagtgccag cagcccggcc aggcgtgcga accagccctt cagcccttcc
     1081 aggggccagc ggccggccat gccgcccgcc accagggcca tggacatgtc cgcccaggcc
     1141 gtgccgccca ggtggggata gagacgcagg gagccctcca gggcccagcc ggccgccccg
     1201 gcccagaggg ctgtcgccag gggcgccccc acccgtggcg ccagggccag caccagcacg
     1261 acgtggatca cggactgggc ccggggaaag ggcgcgcaca ggaagaccag gcccagggcc
     1321 gcggcgcaga gcaggttctg gcgggaagcc ggcggggcgg gaattctcat ggcatccccc
     1381 gtcggcgcgg cggcttcggc acctgtggcg ccacgaaggg cggctgcact tccagcggcg
     1441 gctgggaggg cagcagcagc acggcggaga tccggtcgag cggagccgag aggttcacct
     1501 gcactttcag ctccagatcg ccctgggcca cttccgccac gtaccccacc agcagccccc
     1561 gggggaacac acgatccagt cccgacgtca gcacggcctc ccccacctgc accacttcct
     1621 ggttgctgat gtagcggatc tgggcgcggc ccgaacccat gccctgcatc acccccgtgg
     1681 cccggctgcg catgagcatc acggccacgg aggcgttggg cgcatctgcg ggcaggatct
     1741 tggcctgcgt ggggcccacg gaccagagcc ggcccacgat gccctcaggt gccagcacgc
     1801 cctgatccgg caccaggccc aggtccgcgc cccgatccag gatcaatccc ccgaaggtgg
     1861 cgggacgcgt gctgaagatc acccgggcgg ccttcagctc cagggggatc tgctgtttca
     1921 gtcccagcag ctgcacggcc gcgtccgcct ccgccagccg tggaccatcc tgggaggcct
     1981 gggtccggag ctgcgcgagt tccgtggcca gacgggcatt ttccgcgcgc gtctcctcca
     2041 ggctgcgggc agcctcccgg cgggaatgcc gccagccctc ccagcgggag gccaggctct
     2101 gggaaggccg agaaagggca tcggcgagcc ccgtccaatg gcggcccgga tccggaccca
     2161 gcatcaccca gcccccatgc cccagccaga ggatgaccag aaaggggcga tgccacgctc
     2221 cgtggcgcca cccccatttg gacttgtgga cggtcatgcc ccctccgggc ggggctagtc
     2281 gaggatctgg atgcggcgga ggagcgggat gttctccagc agcagcgcgg tgccgcgcac
     2341 cacggcggtc tggggatcct cggcccggaa gaccggcagg tgggtctcct tgcgcagccg
     2401 ctcgtccagg ccctggatga gggagccgcc gccggtgagg cagatgcccc ggtcgatgag
     2461 gtccgccgcc agctggggcg gcgtctcgtt cagcgccttg cggaccaggt cgatgatggc
     2521 gccgatgggc tccgccaggg cctcgcggat ctccgcgtca ttgagcgtga gcgtcttcgg
     2581 caggccctcg aactggtccc ggccgctcac ctccatggtg cgggtcagct cggatgggaa
     2641 ggccgagccc agcgtccact tcacttcctc ggccgaggcc tcggagatga gcacgttgta
     2701 cttctcgcgg atgtacttga tcaccgcctc gtccatctcg tcgcccgcga tgaggatgga
     2761 atccgagaac accttgccgt tgtagctgat gaccgccaca tccgtggtgc cgccgccgat
     2821 gtcgacgatc atgcaaccgc gcttctcgtt gatggccagg ccggcgccga tggcggccac
     2881 catggtctgg tccaccagga agacctcccc ggccttggcg tcgtagcaga cctgcttcac
     2941 ggcccggcgg gccacctggt gggcccgggg gggcacgctc accacgatgc gggtgcgggc
     3001 gatgccgcgg ttggggcggg ccttgaggat gaactgggcc agcatcttct ccgcggcatc
     3061 cacctcgaag atcatgccgt ccttcatggg ccggatggtg cgcacaccct ggggggcgcg
     3121 tcccagcagc tgcttggcct cgtcgcccac ggcttccact tcatgggtga cggtgttcac
     3181 cgccacgatg gagggctcgt agatgacgat gcggccggcc tgcttggtgt ggatcagggt
     3241 cgaggccgtg ccaaggtcga tggcaaggtc cgaattgaaa atattggacc agaactggct
     3301 ggagaaaaaa ctggccactg gcggctcccg gagaacctcc tagcgtgcca tgaatccacc
     3361 ccccccggcc atgggccggg caaatctgcc gcggcgctac tcccccgccg ccagcagctc
     3421 ctcgacgagc aggtccccgt ccagccgctg gggcagctcc t
//
LOCUS       DASUDT010000241         4770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1977872, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000241 DASUDT010000000
VERSION     DASUDT010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4770
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1977872"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..1400
                     /locus_tag="VFV26_04990"
     CDS             180..1400
                     /locus_tag="VFV26_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4845552.1"
                     /translation="MKKRWVIVSVALAALAAGMFFTLKGSDGKGKKAEASTPFRLGKV
                     QAEDLQVSVREVGVVDPLTKVEVKSTVSGRIVGLKVREGAAVRAGEVLAEVEPDVNQA
                     QVLSDVQGSVSQARLSFQNAEREFNQQAALFKAGLISEQVHRDARTKRDLAEESFKSA
                     QTRYQIVEDRGIPISGNASTQKARVTAPMNGVVIKRGVELGDTITSGVSSFNAGTVVF
                     TVADLASLIVRVNLNEVDIAKVKVGQAVRITLDAYPQRAFTGKVRFVAPAAELVEKIK
                     VFKVEVGLDELTEAFKTGMSANVEILGEKRDKAVSVPLEALQRRDGQTVVYRLKENLT
                     PQDLAKAKEGLTGRGKFIWLSDHWKEFFDVVPVKAGIATLERVEILSGLKADDQVSLE
                     DPSKRKVEKDDENN"
     gene            1387..2220
                     /locus_tag="VFV26_04995"
     CDS             1387..2220
                     /locus_tag="VFV26_04995"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845553.1"
                     /translation="MKTTSAPFPIIQTQGLTKVYGANGTAVHALRGIDFEVQKGEFVA
                     LIGPSGSGKSTLMAILGCLDLPTDGTYTLDGHAVQGLSGGELARIRNEKVGFVFQSYN
                     LLPKASIARNVELPMLYAGVGRKERRERALALLEKVGIADKADKLPGTLSGGQRQRVA
                     VARALANGPALLLADEPTGALDSRTGAEVLDLFRELHGQGNTLLLVTHDPSIAALAER
                     RVEIRDGEVVMGGLEEDLMSSSRPGTHPTEHHAHVGQAPDRSSSNPGSHSTEPPVRAD
                     R"
     gene            2217..3467
                     /locus_tag="VFV26_05000"
     CDS             2217..3467
                     /locus_tag="VFV26_05000"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845554.1"
                     /translation="MTTSGAFRERMLGAWVEIRENLGRAILQALGVMLGVASVLGGFS
                     ISDSQRKRADEMYVKMGGLDKLNLQPKAAVRDGRPTALQQANLGLRDADAVGGEALNA
                     DAIQGVSRQKNARSRVVSAYGDQDRQISGIGGDFIPANGYEVALGRGFSNAEMESGAP
                     VVILGTEAAEIFFPKGDAVGQVLRIGDIPVTVIGTFKERVFRFRENQRNQFRWRNRII
                     AVPANLVQRRMNGDAYRRVDRVTFRIPDLNVMGTFARQLSDLVKANHRLQEDFRLDDV
                     AARIRRRNSQGDAYDIIFMLSGVLALVGGGIVNVNIQMAGLKERVREVGVKMAIGASG
                     VEIFKGFMTESLLLTALGGLAGLLFGVGFSWVITKSIGIPLHMTPASFLWAYAMAAVF
                     GFLFALYPAWKASRLSPMEALRYE"
     gene            3460..>4770
                     /locus_tag="VFV26_05005"
     CDS             3460..>4770
                     /locus_tag="VFV26_05005"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845555.1"
                     /translation="MSDQTFLLRPPGPSLLAGEAPAPLAKSRGFGLGMFWEVVRTGLV
                     ELWAHKVRSLLTLTLLMLGVFALVVMTSVLDGVMDKISTGFAGMSWDGTVRIAQKTPE
                     TGEERKRFNMSPGLRYEDVPRLTAPHPKVLAFLPRAQRTSSVRVTGDTERIFVTGVSP
                     DYATWMNRPIGFGRGLTEDDQRRRSTVAVVGATLASKLFSGADPVGRDLVVEGVPFRI
                     VGVQAPGQIFNEENYTDANGILIPLETYMDRMDPAHKLAQVTVKLRSVENMGEVSAML
                     LSRVRQAHHGIEDAEVVDLDAEAARGYQNFLEQMQGWKVVLLSLAGTVLLVGGVGVLS
                     VMLISFSDRRFEIGLRKALGASDQEIFIQFLLEAVVLAAIGALLGTVSGGLLCQALSA
                     SFPYGLVVNPVGLITAWVVALVLAVIFGLYPAFRAMRLSPMEAMR"
BASE COUNT          776 a         1649 c         1580 g          765 t
ORIGIN      
        1 tttgtggatc gttgcctcag gcctgtggcg ggacgccaca ccggcgcctc cgggcgctgg
       61 ccggtccccg cccgctggcg gccggtatcc tccggggccc ccgctaaacg ggcccagact
      121 gtgcccgtag gccaaccatc atcccggcag gtccggcgtc tttcccatct gggggttcca
      181 tgaagaagcg gtgggtcatc gtctccgtgg ccctagccgc cttggcggcc ggcatgttct
      241 tcaccctcaa gggcagcgat ggcaaaggca aaaaggcgga agccagcacg cccttccggc
      301 ttgggaaagt ccaagccgag gatcttcagg tcagcgtccg cgaggtgggg gtggtggatc
      361 ccctcaccaa ggtggaggtg aaatccacgg tctccggccg catcgtgggg ctgaaggtcc
      421 gggagggcgc ggccgtgcgg gctggtgagg tcctggccga ggtcgagccg gacgtgaacc
      481 aggcccaggt cctgtccgat gttcagggca gcgtctccca ggcccgcctc agcttccaga
      541 acgccgagcg ggaattcaac cagcaggccg ccctcttcaa agcggggctc atttccgagc
      601 aggtccatcg cgacgcccgc accaagcgcg atctggcgga ggagtccttc aagagcgcgc
      661 agacccgcta ccagatcgtg gaggaccgcg gcatccccat cagcggcaac gcctccaccc
      721 agaaggcccg ggtgaccgcc cctatgaatg gcgtggtcat caagcggggc gtggagttgg
      781 gcgacaccat cacctccggc gtgagttcct tcaatgcagg caccgtggtg ttcaccgtgg
      841 cggatctggc ctccctcatc gtgagggtga acctcaacga ggtggacatc gccaaggtga
      901 aggtcggcca ggccgtccgc atcaccctgg acgcctaccc ccagcgcgcc ttcaccggca
      961 aggtgcgctt cgtggctccg gccgcagagc tggtggagaa gatcaaggtg ttcaaggtgg
     1021 aggtgggcct ggacgagctc accgaggcct tcaagaccgg catgagcgcc aacgtggaga
     1081 tcctgggcga gaagcgcgac aaggccgtga gcgtgcccct cgaggccctc cagcggcggg
     1141 atggccagac cgtcgtctac cggctgaagg agaacctcac gccccaggac ctggcgaagg
     1201 ccaaggaggg cctgacgggc cgaggcaagt tcatctggct ttccgaccac tggaaggagt
     1261 tcttcgacgt cgtgcccgtc aaggcgggca tcgccaccct ggagcgcgtg gagatcctgt
     1321 cgggcctgaa ggccgacgac caggtgagcc tcgaggaccc cagcaagcgg aaagtcgaga
     1381 aggacgatga aaacaactag cgcccctttc cccatcatcc agacccaggg cctgaccaag
     1441 gtctacggcg ccaacggcac ggcggtccac gcactgcggg gcatcgactt cgaggtgcag
     1501 aagggggagt tcgtggccct catcggccct tcgggctctg gaaaatccac cctcatggcc
     1561 atcctgggct gcctggacct gcccacggac ggcacctaca ccctggacgg ccatgcggtc
     1621 cagggcctct cgggcggcga gttggctcgg atccgcaacg agaaggtggg cttcgtcttc
     1681 cagagctaca acctcctgcc caaggcgagc atcgcccgca acgtcgagct gcccatgctc
     1741 tacgccggtg tgggccgcaa ggagcgccgc gagcgggccc tggccctgct cgaaaaggtg
     1801 ggcatcgccg acaaggccga caagctgccg gggacgctct ccggcggcca gagacagcgc
     1861 gtcgccgtgg cccgcgccct ggccaacggg cccgccctgc tgctggcgga cgagcccacg
     1921 ggcgccctgg attccaggac cggcgccgaa gtgctcgacc tcttccggga gctgcacggc
     1981 cagggcaaca ccctgctgct ggtgacccac gatccctcca tcgccgccct ggcggaacgg
     2041 cgcgtggaga tcagagatgg cgaagtcgtg atgggtggcc tggaggagga cttgatgtcc
     2101 tcctccaggc cgggcaccca tccgactgag catcatgccc atgttggcca ggcccccgat
     2161 cgaagctcct ccaacccagg ctcccattcc actgaacctc ccgtccgagc ggatcgatga
     2221 ccacctccgg cgccttccgc gagcgcatgc tcggagcctg ggtggagatc cgggagaacc
     2281 tgggccgcgc catcctccag gccctggggg tcatgctggg cgtggcctcg gtgctgggcg
     2341 ggttttccat ctccgacagc cagcgcaagc gggccgacga gatgtacgtg aagatgggcg
     2401 gcctcgacaa gctgaacctc cagcccaagg ccgccgtgcg cgacgggcgc cccaccgccc
     2461 tgcagcaggc caacctgggg ctccgggatg cggatgcggt gggcggtgag gccctcaatg
     2521 ccgacgccat ccagggcgtg agccggcaga agaacgcccg ctcgcgggtg gtgtcggcct
     2581 acggtgacca ggatcgccag atcagcggca tcggcggcga cttcatccct gccaacgggt
     2641 acgaggtggc cctgggccgc ggtttctcca acgccgagat ggaatccggc gcccccgtgg
     2701 tcatcctcgg caccgaggcc gccgagatct tcttccccaa gggcgacgcc gtgggccagg
     2761 tcctgcgcat cggggacatc cccgtcaccg tcatcggcac cttcaaggag cgggtcttcc
     2821 ggttccggga aaaccagcgc aaccagttcc ggtggcgcaa ccgcatcatc gccgtccccg
     2881 caaacctggt gcagcggcgc atgaatggcg atgcctaccg ccgcgtggac cgcgtcacct
     2941 tccgcatccc cgacctgaac gtgatgggca ccttcgcccg gcagctctcc gacctcgtga
     3001 aggccaacca ccggctgcag gaggatttcc gcctcgacga cgtggccgcc cgcatccggc
     3061 gccggaacag ccagggcgat gcctacgaca tcatcttcat gctctctggc gtgctggccc
     3121 tggtgggcgg cggcatcgtc aacgtgaaca tccagatggc cggcctcaag gaacgcgtcc
     3181 gcgaagtggg ggtgaagatg gccatcgggg cctcgggcgt ggagatcttc aagggcttca
     3241 tgaccgagtc cctcctgctc accgcgctgg gcggcctggc cgggctgctg ttcggtgtcg
     3301 ggttctcctg ggtcatcacc aagagcatcg gcattccgct ccacatgacc ccggccagct
     3361 tcctctgggc ctacgcgatg gcggccgtct tcggcttcct cttcgccctg tacccggcct
     3421 ggaaggcctc gcggctgtct ccgatggagg ccctgcgcta tgagtgacca gaccttcctc
     3481 ctccggccgc cagggccctc cctgctcgcc ggggaggcac cggcaccttt ggccaaatcc
     3541 cgtggcttcg gcctcggcat gttctgggag gtggtccgca cggggctcgt ggagctctgg
     3601 gcccacaagg tccgcagcct cctgaccctc accctgctca tgctcggcgt cttcgccctg
     3661 gtggtgatga cctccgtact ggatggggtc atggacaaga tcagcaccgg cttcgccggc
     3721 atgagctggg acgggacggt gcgcatcgcc cagaagaccc ccgagaccgg cgaggagcgc
     3781 aagcgcttca acatgagccc cggcctgcgc tacgaggacg tgccccgcct caccgctccg
     3841 caccccaagg tgctggcctt cctcccccgg gcccagcgga cctcttcggt gcgcgtcacc
     3901 ggggataccg agcgcatctt cgtcacaggc gtatctccgg actacgccac ctggatgaac
     3961 cgccccatcg gattcggccg gggcctcacc gaggatgacc agcgccgccg gtccacggtg
     4021 gcagtggtgg gcgccacgct cgcctccaag ctcttcagcg gagcggatcc ggtgggccgg
     4081 gacctggtgg tggagggcgt gcccttccgc atcgtgggcg tgcaggctcc tggacagatc
     4141 ttcaacgagg agaactacac cgatgccaat ggcatcctga tccccctgga gacctacatg
     4201 gaccgcatgg acccggccca caagctggcc caggtcaccg tgaagctgcg cagcgtcgaa
     4261 aacatgggcg aggtctccgc catgctgctg agccgcgtcc ggcaggccca ccacggcatc
     4321 gaggatgccg aggtcgtcga cctggacgcc gaagcggcca ggggctacca gaacttcctg
     4381 gagcagatgc agggatggaa ggtggtgctg ctcagcctgg cgggcacagt gctgctcgtg
     4441 ggtggtgtgg gggtgctttc ggtgatgctc atcagcttca gcgaccgccg cttcgagatc
     4501 ggcctgcgca aggccctggg cgcctcggac caggagatct tcatccagtt cctgctggaa
     4561 gccgtggtgc tggccgccat cggcgccctg ctgggaacgg tctcgggtgg cctgctctgc
     4621 caggccctct ccgccagctt cccctatggc ctggtggtga atcccgtcgg cctcatcacc
     4681 gcctgggtgg tggccctggt gctggccgtc atcttcggcc tctatcccgc cttccgcgcc
     4741 atgcgcctca gccccatgga agccatgcgg
//
LOCUS       DASUDT010000242         3107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1889304, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000242 DASUDT010000000
VERSION     DASUDT010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889304"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VFV26_05010"
     CDS             <1..857
                     /locus_tag="VFV26_05010"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845556.1"
                     /translation="RFGSKEAVKGLDLSLAEGELVGLVGPDGAGKTTTFRMLVGLQAP
                     SGGTLARRVAREKVSYVPQAFSLAPELTVAESMRLQAQLFDLRAPASRIERLLESVDL
                     APFRDRPSGALSGGMKQKLSLCAALLTEPRLLLLDEPTTGVDPVSRREFWALLHRVHD
                     DGVAILFSSPYMDEAEYAHRMLLMHEGRILQEGDLASFRRGLPGLVVRLVSARRRETQ
                     KAVATLEPLDLFAEGEIIRARFPAQDPAPLLARLAALPGVEQARLSEPNLEDVFLHAL
                     AEAGGGHG"
     gene            850..1779
                     /locus_tag="VFV26_05015"
     CDS             850..1779
                     /locus_tag="VFV26_05015"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845557.1"
                     /translation="MAEAVLEVRGLTRRFGDFTAVSDLSFEIRPGEIFGFLGPNGAGK
                     STTIRMLCGVLAPSAGEARALGRDLFTEADHLRARMGYMSQKSSLLTDLTVAENLRFF
                     GGLYGLEGEGLQSEVAFRLHEMQVWDQRDLLVSALSTGERQRVALAAATLHRPEILFL
                     DEPTSGVDPLRRRLFWEAMNELVAEGMSILVTTHNLAEADQCDRLAFILGGKLMAYGR
                     PRTLKEDLGRQVIELRTERFRELQASARQIPGVLSAELLGRSVRLSLSAEEDPAALLA
                     VLSQAGHAFEALPSELPSLEDLFVDLVQRSRTA"
     gene            1790..2917
                     /locus_tag="VFV26_05020"
     CDS             1790..2917
                     /locus_tag="VFV26_05020"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845558.1"
                     /translation="MWNRIKALVWKEFLQLRRDRMTLAFTLGMPLMQLVIFGYAINYD
                     VKHMPAAVLDESRSQESRGFVDGLVASQYFDVKVRVDSEADLRAAIDRGKAQVGVWFP
                     PDYARRIRSGQTGQVMILVDGSSPTTASNAMGTAQGVGQLRNTQLLYDRMGHGGAAKP
                     VMPVEVRIRPWYNPDLRSPTFIVPGLVGVILSMTCIMFAANAIVREKERGTLDQIMVT
                     PVRPFELFAGKVLPVVAMAYAQMTVLFGVANLFFRVPVAGSVLLLYLMAGLFIIPMLG
                     IGITISTKAQSQGQSAQMSMLTFLPFVFLSGYIFPREGMPLPFYLLGEIMPLTHFIII
                     IRAIMLRGVGLEAFWPEVLKLLALSALIWTLALRSMKRAEA"
BASE COUNT          468 a         1112 c         1004 g          523 t
ORIGIN      
        1 ggcgatttgg ctccaaggag gctgtgaagg gtctggacct cagcctggcc gaaggcgagc
       61 tggtgggcct ggtgggcccc gatggcgcgg gcaagaccac gaccttccga atgctggtgg
      121 gtctccaggc gcccagcggc ggcaccctgg cccgtcgcgt ggcccgggag aaggtgagct
      181 acgtgcccca ggccttcagc ctggccccgg agctcaccgt ggccgagagc atgcgcctcc
      241 aggcccagct cttcgacctg cgggctcccg cctcccgcat tgagcgcttg ctggaatccg
      301 tggacctggc gcccttccgc gaccggccct ccggcgccct ttccgggggc atgaaacaga
      361 agctctccct ctgcgccgcc ctgctcacgg agccgcggct gctgctgctg gacgaaccca
      421 ccacgggcgt ggatcccgtg agccgccgcg aattctgggc gctgctgcac cgggtccacg
      481 acgacggcgt ggccatcctc ttctccagcc cctacatgga cgaggccgag tacgcccatc
      541 gcatgctcct catgcacgag gggcggatcc tccaggaggg cgatctggcc tccttccgcc
      601 ggggtctgcc gggcctggtg gtccgcctcg tcagcgcccg ccggcgcgag acccagaagg
      661 ccgtcgccac ccttgaaccg ctggacctct tcgcggaagg ggagatcatc cgcgcccgct
      721 tccccgccca ggatccggcc ccgctgctgg cccgcctggc ggctctgccg ggcgtcgagc
      781 aggcccgtct ttccgagccg aacctggagg atgtgttcct ccatgccctg gccgaggccg
      841 gaggcggcca tggctgaagc cgttctggaa gtccgtggcc tgacccgccg cttcggcgat
      901 ttcaccgccg tatcggacct cagtttcgag atccggcccg gagagatctt cggcttcctg
      961 ggccccaatg gcgccggcaa gagcaccacc atccgcatgc tctgcggcgt gctggctccc
     1021 agcgcgggcg aggcccgggc cctgggccgc gacctgttca cggaggcgga ccacctgcgg
     1081 gcccgcatgg gctacatgag ccagaaatcc agcctgctca cggatctcac cgtggccgag
     1141 aacctgcgct tcttcggggg actctacggg ctcgaaggcg agggcctcca gtccgaggtg
     1201 gccttccgcc tccatgaaat gcaggtctgg gatcagcggg acctgctggt gtcggccctc
     1261 tccaccggcg agcggcagcg cgtggccctg gcggcggcca ccctgcaccg ccccgagatc
     1321 ctcttcctgg atgagcccac cagcggcgtg gatcccctgc ggcggcgcct tttctgggag
     1381 gccatgaacg agctggtggc cgagggcatg agcatcctcg tgacgaccca caatcttgcc
     1441 gaggccgacc agtgcgaccg gctggccttc atcctcgggg ggaaactcat ggcctacggc
     1501 cgtccccgga cgctcaagga ggacctgggg cggcaggtga tcgagctgcg caccgagcgc
     1561 ttccgggagc tgcaggcctc cgccaggcag attcccggcg tcctttccgc agaactgttg
     1621 ggccgcagcg tgcgcctttc cctttccgca gaagaagacc cggccgccct cctggcggtg
     1681 ctgagccagg cgggccatgc cttcgaggcc ctgccgtccg aactcccctc tctcgaagac
     1741 ctgttcgtgg acctggtcca acgctcccgc actgcctgag gaaacgacca tgtggaaccg
     1801 catcaaagcc ctggtctgga aggaattcct gcaactccgg cgggaccgga tgaccctggc
     1861 cttcaccctg ggcatgccgc tcatgcagct ggtcatcttc gggtacgcca tcaactacga
     1921 cgtgaagcac atgcccgccg cggtgctgga tgaatcgcgc agccaggaga gccgcggctt
     1981 cgtggacggc ctggtggcca gccagtactt tgatgtgaag gtgcgggtgg attccgaggc
     2041 ggacctccgc gctgccatcg accgcggaaa ggcccaggtg ggcgtttggt tcccgccgga
     2101 ctacgcccgc cgcatccgct cgggccagac cggccaggtg atgatcctgg tggacggctc
     2161 cagccccacc acggcctcca acgccatggg cacggcccag ggcgtgggcc agctgcggaa
     2221 cacccaactg ctctatgacc gcatgggcca tggcggggcg gccaagcccg tcatgcccgt
     2281 ggaggtgcgg atccgtccct ggtacaaccc ggatctccgc agtcccacct tcatcgtccc
     2341 ggggctcgtg ggcgtcatcc tctccatgac ctgcatcatg ttcgcggcca acgccatcgt
     2401 gcgggagaag gagcggggca ccctggacca gatcatggtc acgcccgtgc ggccctttga
     2461 gctcttcgca ggcaaggtgc tcccggtggt ggcgatggcc tacgcccaga tgaccgtgct
     2521 gttcggggtg gcgaacctct tcttccgcgt gcccgtggca ggctcggtgc tcctgctcta
     2581 cctgatggcc ggcctcttca tcatccccat gctgggcatc ggcatcacca tctcgacgaa
     2641 ggcgcagagc cagggccaga gcgcccagat gagcatgctc accttcctgc ccttcgtgtt
     2701 cctcagcggc tacatcttcc cccgcgaagg gatgcccctg cccttctacc tgctcggcga
     2761 gatcatgccg ctcacccact tcatcatcat catccgggcc atcatgctgc gcggggtggg
     2821 gctggaggcc ttctggcccg aggtgctcaa attgctggcg ctctccgccc tcatctggac
     2881 cctggccctg cgcagcatga agcgcgcaga agcctgaggc cgagtcgcca ccaatgatag
     2941 ggattcacca cagagtcacg gaaaccacgg aggaggcacg gaggcctccg tgttcctcca
     3001 tcatgggcag gccggaggcc gcttccggac aagccggaag ccacgggaga cgccgggtcc
     3061 ggattccctc aaaaggatcc agatccggcg tctcccgtgg cttccgg
//
LOCUS       DASUDT010000243         5332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1756898, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000243 DASUDT010000000
VERSION     DASUDT010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5332
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1756898"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1074
                     /gene="argC"
                     /locus_tag="VFV26_05025"
     CDS             76..1074
                     /gene="argC"
                     /locus_tag="VFV26_05025"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX4845559.1"
                     /translation="MTPVDVLILGASGYGGGELLRWLSNHPSVKSISGTARSHAGKPF
                     HAQHPNLRGLVDGAFEASPDWAALAKSEHPVLFSALPHGELTRLWPDFQPEWDRLDLT
                     RRIIIVDLSADFRLDPAWTYGLVDWKPERMKGARRIANPGCFATALQLALLPLAPWQP
                     AFVAVTAATGSSGSGAAPSDTTHHPTRANDFRAYKMLSHQHEAEVLRTLAGEGWAAPL
                     SFVPQSAPMVRGIFATAQFPLPAGIEVGALRAHYERYYKDRFFVRIVDGSPRVAATTG
                     SAFADIGVAARQGHGAVMVALDNLGKGMAAQAVQNLNLALGLPEWTGLKMAGGWPA"
     gene            complement(1081..2217)
                     /locus_tag="VFV26_05030"
     CDS             complement(1081..2217)
                     /locus_tag="VFV26_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845560.1"
                     /translation="MAFVSGPRQVGKTTACRSLGGEYLNWDNQDDRRILLKGPGALAD
                     RLGLDRLRAQPPLVILDELHKHAKWKGLLKGFFDTYGDRVQVLVTGSSRLDIFRRGGD
                     SLMGRYLLYRMHPWSVAECERVELPGQEIRPPISIRPEDWAALWAHGGFPEPFLRRDL
                     RFTRRWRSLRHDQLAREDLREVTQVQDLGAMETLMRILAERSGQQLIFANLAGELGVA
                     VDTVRRWVDLLGRLHYGFLVRPWFANVTKALRKEPKWFLRDWSGVADEGARAETLVAC
                     HLLKAVEGWTDLGFGDFELRYLRDKQKREVDFLVVKDQQPWFLVEVKASETKLSPSLR
                     HFQEQTGAPHAFQAVIHLPYEAVDCFSMMRPVTVPALTLLSQLL"
     gene            2396..2695
                     /locus_tag="VFV26_05035"
     CDS             2396..2695
                     /locus_tag="VFV26_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845561.1"
                     /translation="MAQFPLPAGIEVGALRAHYEGFYKDRIFVRIVDGPPRVAATTGS
                     AFADIGVAARHGHGAVMVALDNLGKGMAAQAVQNLNLALGLPEWTGLKVAGGYPG"
     gene            2775..4151
                     /locus_tag="VFV26_05040"
     CDS             2775..4151
                     /locus_tag="VFV26_05040"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX4845562.1"
                     /translation="MNPSLLTREALGQFAQESRAAFEAELKTLVEIPSISADPARQGD
                     VRRVAEAARALFERHGGKAEILETSGNPLIHGWFGEDPNCPTITVYNHMDVQPANEPE
                     WTAEPFTFVVDGDTYRGRGSTDDKGPAVTAFFGALAARRAGVPLNIHFLWETEEEIGS
                     PSFAGGLNRHKDRFKTDAIVVSDTVWITRGKPSTPAGLRGLKGFRLTLETADHDLHSG
                     VVGGAARNPLSELIKVVAEMMDGETGKVKIPGFYDEVVKPSKQELEEWAHAGFSVETF
                     KKDHMITGMRTEDPIKVMKRVWGRPTMEVHGVVGGYTGPGIKSAVPPRAEVKMSCRLV
                     PDMDEHTTIDRIRAFVNERFPDVQFHEEHGLAPFKGHVTGPYAEAIKDAYRFAFNAPC
                     SFTREGGSIGAVKTMEDILGCEVFFLGLSLPSHGYHAPNENYDWEQAGGGIAAFAHYF
                     QTVSGIKN"
     gene            4495..>5332
                     /locus_tag="VFV26_05045"
     CDS             4495..>5332
                     /locus_tag="VFV26_05045"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEX4845563.1"
                     /translation="MRHREPPEGLDHERWWLGLRWSRQALLKPLPLLDKKGRPFSFGA
                     PEPVQIDLHHIDQDAAGEIKSATDTATPATRDRYLLKSVIEEAITSSQLEGASTTRRV
                     AAEMLRSGRAPKDRSEQMIFNNFLAMRAIQGFRNEPMTPARFLEIHRMVSEHTLDDPR
                     DVGRLRQSDDIHVVDNDDGTILHQPPDHRELPERLERLCAFANAGEDQRPFVHPVLRA
                     ILLHFMVGYDHPFADGNGRTARALFYWSMLRSGYWLAEFISISHILRKAPAQYGRAYL
                     FTE"
BASE COUNT          975 a         1810 c         1652 g          895 t
ORIGIN      
        1 atccgcattt tgcttttcat ctgcgtcatc tgcgtcatct gcggttaaac attcagttct
       61 tcttgcgaga tgtccatgac cccagtcgat gtcctgattc tcggcgcctc gggctacggc
      121 ggaggcgagc tgctgcgctg gctgtcgaac cacccgtccg tgaagtcgat cagcgggacc
      181 gcccgcagcc acgcgggcaa gcccttccat gcccagcacc cgaacctgcg gggcctggtg
      241 gacggcgcct tcgaggcgtc gccggactgg gcggccctgg ccaagagtga acatcccgtg
      301 ctgttctcgg ccctgcccca tggcgaactg accagactct ggccggattt ccagcccgaa
      361 tgggatcgcc tcgatctcac ccggcggatc atcatcgttg atctctctgc ggatttccgc
      421 ctggaccccg cctggaccta cggcctggtg gactggaagc ccgagcgcat gaagggcgcc
      481 cggcgcatcg ccaaccccgg ttgcttcgcc acggccctgc agctggccct gctgcccctg
      541 gccccctggc agccagcctt cgtggccgtc accgcggcca cgggctcctc ggggtccggc
      601 gccgcgccca gcgacaccac ccatcacccc acgcgggcca acgatttccg ggcctacaag
      661 atgctcagcc accagcacga ggccgaggtg ctgcgaaccc tggcgggcga aggctgggcg
      721 gcgcccctca gcttcgtgcc ccagagcgcg cccatggtgc gggggatctt cgccacggcg
      781 caattcccgc ttcccgcggg aattgaagta ggggcgctgc gcgcccacta cgagcgctat
      841 tacaaagata gattcttcgt gcggatcgtg gatggatcgc cccgggtggc ggccaccacg
      901 gggagcgcct tcgcggatat cggcgtcgct gcccgccagg gccacggcgc ggtcatggtg
      961 gccctggaca acctgggcaa gggcatggcc gcccaggccg tgcagaacct caacctggcc
     1021 ctgggcctgc cggagtggac ggggctcaag atggcgggtg gctggccggc ctgattcgcc
     1081 ctagagcaac tggctcagca gggtcaacgc cggaaccgtc acgggtcgca tcatgctgaa
     1141 gcagtccacc gcttcatagg gcaagtgaat cacggcctga aaagcgtggg gtgcgccggt
     1201 ctgttcctgg aagtggcgga gcgaaggtga cagcttggtt tcgctggcct tcacttccac
     1261 caggaaccag ggctgctggt ctttcaccac caggaaatcc acctcgcgct tctgcttgtc
     1321 gcgcagatag cgcagctcga agtccccaaa tcccaggtcc gtccaaccct ccacggcctt
     1381 cagcaggtgg caggccacca gggtctcggc tcgggccccc tcatccgcga cgccgctcca
     1441 gtcccggagg aaccacttgg gttccttgcg cagggccttg gtgacgttcg cgaaccaggg
     1501 ccgcaccagg aatccatagt ggagccgccc gaggagatcc acccagcggc gtacggtgtc
     1561 caccgccacg cccagttcac ccgccaagtt ggcgaagata agctgctgcc cgctgcgttc
     1621 ggccagaatg cgcatgaggg tttccatggc gccgagatcc tgtacctggg tgacctcgcg
     1681 cagatcttcg cgagccagtt gatcgtggcg cagggaccgc cagcggcgcg tgaaccgaag
     1741 gtcccggcgc agaaaaggtt cggggaagcc cccgtgcgcc cacaacgctg cccagtcctc
     1801 gggacgtatg gaaatcggcg gacggatctc ctgcccaggc agttccaccc gctcacattc
     1861 cgccacggac caggggtgca tccgatagag gagataccgc cccatgaggc tgtcgccgcc
     1921 gcggcggaaa atgtccagcc gcgagctgcc tgtcaccagc acctggacgc ggtcgccgta
     1981 ggtatcgaag aaccccttga gcagcccctt ccacttcgcg tgcttgtgca actcgtccag
     2041 gatgaccagg ggaggctggg cgcggaggcg atccagaccg agccggtccg ccagggcgcc
     2101 cggccccttc aacaggatcc gacggtcatc ctggttgtcc cagttgaggt attcgccccc
     2161 caaagaccgg caggcggtgg tcttccctac ctgccgaggt ccactcacga acgccatctg
     2221 acgatgtcgg cgaaagtggt ccttcaatag agttgcgtaa aatcgggggc gatcagacat
     2281 aagaccatta tcgttgccat cactaaatgg tcaagaccat tcgacgattt atagacattt
     2341 ggtcagccaa cgttggcctg cccaaggcgc cctcagggtg cgggggatct ttgctgtggc
     2401 tcaattcccg ctgcccgcgg gaattgaggt gggggccctg cgggcccact atgagggctt
     2461 ctacaaggac cggatctttg tgcggatcgt cgatgggccc ccccgggtgg ccgccaccac
     2521 gggcagcgcc tttgcggata tcggggtcgc cgcccgccac ggtcacggcg ccgtcatggt
     2581 ggccctggac aacctgggca agggcatggc cgcccaggcc gtgcagaacc tcaacctggc
     2641 cctgggcctg ccggaatgga ccggattgaa ggtggccgga gggtacccgg gctgaggcat
     2701 cgaggatgcc tagatcgctt aatagacaag gcttccggat atggggatga tgattgaccc
     2761 tttccggagc gtctatgaac ccatcccttc tcacccgcga ggccctggga cagttcgccc
     2821 aggagagccg cgcggccttc gaggcggagc tgaaaaccct ggtggagatc ccctccatca
     2881 gcgccgaccc ggcccggcag ggcgacgtgc ggcgcgtggc cgaggcggcg cgcgccctgt
     2941 tcgagcggca cggcggcaag gccgagatcc tggagaccag cggcaatccg ctcatccacg
     3001 gctggttcgg cgaggatccc aactgcccca ccatcacggt ctacaaccac atggacgtgc
     3061 agcccgccaa tgagcccgag tggacggcgg agcccttcac cttcgtggtg gacggcgaca
     3121 cctaccgcgg ccgcggcagc acggacgaca agggcccggc ggtgaccgcc ttcttcggcg
     3181 ccctggcggc ccgccgcgcg ggcgtgcccc tcaacatcca cttcctgtgg gagacagaag
     3241 aagagatcgg ctcgcccagc ttcgccgggg gcctcaaccg ccacaaggac cgcttcaaga
     3301 ccgatgccat cgtggtgagc gacacggtct ggatcacccg gggcaagccc agcacccccg
     3361 cgggcctgcg gggtctcaag ggcttccggc tcacgctgga gaccgcggac cacgatctgc
     3421 acagcggcgt ggtgggcggc gcggcgcgca acccgctctc ggagctcatc aaggtggtcg
     3481 ccgagatgat ggatggcgaa accggcaagg tgaagatccc gggcttctac gacgaagtgg
     3541 tgaagccctc caagcaggag ctggaggagt gggcccacgc gggcttcagc gtggagacct
     3601 tcaagaagga ccacatgatc accggcatgc gcacggagga tcccatcaag gtcatgaagc
     3661 gcgtgtgggg ccggcccacc atggaagtcc acggcgtcgt gggcggctac acgggccccg
     3721 gcatcaagag cgccgtgccc ccccgcgccg aggtcaagat gagctgccgc ctggtgccgg
     3781 acatggacga gcacaccacc atcgaccgca tccgagcctt cgtgaacgag cggttccccg
     3841 atgtgcagtt ccacgaggag cacggcctgg cgcccttcaa gggccacgtg acgggcccct
     3901 acgccgaggc catcaaggac gcctacaggt tcgccttcaa cgccccctgc tccttcaccc
     3961 gcgaaggcgg cagcatcggc gccgtgaaga ccatggagga catcctgggc tgcgaggtct
     4021 tcttcctggg cctcagcctc cccagccacg gctaccacgc ccccaatgag aactacgact
     4081 gggagcaggc gggcggcggc atcgccgcct tcgcccacta cttccagacg gtgagcggca
     4141 tcaagaactg aaggccgttc cttgcgaaaa tcgccggccg atggccggcg attttcgttg
     4201 gaagatgtcc tgcatcgacc acccccgatg gcagttccca ggtgttcacc cgatctgtca
     4261 atgtaatact aattgatatt aattttagtt ttttgtagac acctgccccg tcccgcccta
     4321 acctactagc gaattcctaa ttgaattatc aattagtagg tgaccatgaa gctcccccac
     4381 ccacctccag agatatccat acttctttca actgttgaag ctggagatat tcaaaaaatc
     4441 ctcgaactcc aacttggccc cctggtcaag gacgcctacc tccactggga cgaattgagg
     4501 catcgcgagc ccccggaggg cctggatcac gagcggtggt ggctgggcct ccggtggtct
     4561 cgacaagccc tcctgaagcc cctccccctg ctggacaaga agggacgtcc attctccttc
     4621 ggggcccccg agcctgttca gatcgatctg caccacatcg accaggatgc ggccggcgaa
     4681 atcaagtccg ccaccgatac cgccacgccc gccacccggg acaggtacct cctcaaatcg
     4741 gtcatcgagg aggccatcac ctcgagccag ctggaggggg cttcgacaac ccggagggtg
     4801 gccgccgaga tgctccggtc cggaagggct ccgaaagacc gaagcgagca gatgatcttc
     4861 aataacttcc tggccatgcg cgccatccag ggcttcagga acgagccgat gaccccggcg
     4921 cggttccttg agatccaccg catggtgtcc gagcacaccc tggacgatcc ccgggacgtg
     4981 ggcaggctgc gccagtcgga cgacatccac gtggtggata acgacgacgg aaccattctc
     5041 caccagccgc ccgaccatcg tgagctgccg gaacgcctgg agcggctctg cgccttcgcc
     5101 aatgccggcg aagaccagcg ccctttcgtg catccggtcc ttcgggccat tctgctgcac
     5161 ttcatggtcg gatatgacca tcctttcgcg gatggaaatg ggcggacggc cagggcgctc
     5221 ttctactggt ccatgctccg cagcgggtac tggctggccg agttcatctc tatctcgcac
     5281 atcctccgca aggcgccagc ccagtacggg cgggcctacc tattcaccga aa
//
LOCUS       DASUDT010000244         2516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_321293, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000244 DASUDT010000000
VERSION     DASUDT010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321293"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2081
                     /locus_tag="VFV26_05050"
     CDS             <1..2081
                     /locus_tag="VFV26_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX4845564.1"
                     /translation="GTHLGIDRLQVTAALLPDPAPIAERLTKSFNADGQLDPLRIPAL
                     ASLHRHRQDAFQAVQAKLQKLLRTAPDAFNEAMVVERNGRLCLPVRSERRSLVPGLVL
                     DRSGSGATVFVEPMEAVPLNNAFVEADRDYAQAVQAFLRDLLADLRARREDFTRWRDL
                     QAQADQGLALLRWAALCDGRLPDLEADPKRGRLCLLEARHPMLLPAVREAMDLEPLPH
                     PVVPLNLVLEAGKPGLVISGSNTGGKTVVLKTVGLLSVLAACGCAVPAKAGSSFPALP
                     SLHADIGDHQTITGSLSTFSSHILHLKEILENVHDGGLVLLDELGTGTDPKEGAALGI
                     ALLQTLSRRRCWILCSTHLGEISQWALRHARFQNASVQFDEDRLAPTYRLLVGQPGQS
                     RALTIAARLGLPAQVLDHADKVLGQREQDWRDFLRELEAERTRLLEEAETLRQQRAAA
                     DKDREILRQREEKLRLERDAFQRDSKEKVARVLDFLDHEGKRLVKDLKERQKAAGVNA
                     DRLGTEAHERVKQLTRLAEAELAPAGARAKPAAAPREVREGGYARHRGLGVEGRVALL
                     KGDRVTLETPQGRRLECRLGELEPIGAREAEPRPSGKVRVRAEALDIESEINLIGRAS
                     DEVDSEIYRFVEEALAGGRRFIRIVHGHGTGRLKAAVREALRGHPGISRVEDAPQNQG
                     GAGATVVTLR"
     gene            2147..>2516
                     /locus_tag="VFV26_05055"
     CDS             2147..>2516
                     /locus_tag="VFV26_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845565.1"
                     /translation="MSFWNNLNVRKKLLYSILALAMVLGAAATIFSLWRLNTALNDGL
                     KLEAGSLASLVSDGIQSGVQFEDMGLVERGLDGMKDNHDITQAALVSLDPATNAAKVV
                     TKSKAKASQIDLAPFAEAFLK"
BASE COUNT          409 a          914 c          854 g          339 t
ORIGIN      
        1 cgggcaccca cctgggcatc gaccggctcc aggtgacggc ggccctgctg ccggatcccg
       61 cacccatcgc cgagcgcctg acgaagagct tcaacgccga cggccagctg gatcccctgc
      121 gcatcccggc cctggccagc ctccaccggc accgccagga cgccttccag gccgtgcagg
      181 ccaagctgca gaagctgctg cgaacggcgc cggatgcctt caacgaggcc atggtcgtgg
      241 aacgcaacgg ccggctctgc ctgcccgtcc gctcggagcg gagaagcctg gtgccgggtc
      301 tggtgctgga ccgcagcggc agcggcgcca cggtcttcgt ggaacccatg gaggcggtgc
      361 ccctcaacaa cgccttcgtg gaggcggacc gggactacgc ccaggccgtg caggccttcc
      421 tccgggatct gctggcggac ctgcgggccc ggcgcgagga cttcacccgc tggcgggacc
      481 tccaggccca ggccgatcag gggctcgcgc ttctgcgctg ggccgccctc tgcgacgggc
      541 gcctgccgga cctggaagcg gatccgaagc ggggccgtct ctgccttctg gaggcccgcc
      601 accccatgct gctgcccgcg gtgcgggagg ccatggacct ggagcccctg ccccatccgg
      661 tggtgcccct caacctggtg ctggaggccg gtaagcccgg cctcgtcatc tcgggctcca
      721 acaccggtgg caagaccgtc gtcctcaaga ccgtgggcct cctgtcagtc ctggccgcct
      781 gcggctgcgc ggtgcccgcc aaagccggtt ccagctttcc cgccctgccc agcctccacg
      841 ccgatatcgg cgatcaccag accatcacgg gaagcctgtc gaccttcagc agccatatcc
      901 tgcatttgaa agagatcctg gaaaacgtcc atgatggcgg cctggtgctg ctggacgagc
      961 tgggcacggg cacggatccc aaggagggcg ccgccctggg catcgccctg ctccagaccc
     1021 tgtcccggcg acgttgctgg atcctctgct ccacccacct gggcgagatc agccagtggg
     1081 ccctgcgtca tgcgcgcttc cagaacgctt cggtgcagtt cgacgaggac cgtctggccc
     1141 ccacctaccg cctgctggtg ggccagccgg gccagagccg ggccctcacc atcgccgcca
     1201 ggctgggtct gccagcccag gtcctggacc acgccgacaa ggtactgggc cagcgcgagc
     1261 aggactggcg cgacttcctg cgggaactgg aggccgagcg cacccgcctg ctcgaagaag
     1321 cggaaaccct gcgccagcag cgggccgccg ccgacaagga ccgggagatc ctccgccagc
     1381 gggaggagaa gctgcgcctc gaacgtgatg ccttccagcg ggactccaaa gagaaagtgg
     1441 cccgggtgct ggacttcctg gaccacgaag gcaagcggct ggtcaaggac ctgaaggagc
     1501 ggcagaaggc cgcaggcgtc aacgccgacc gcctgggcac cgaggcccat gagcgggtca
     1561 agcagctcac ccgcctggcc gaggcggaac tggcgcccgc cggggcccgg gccaagcctg
     1621 cggccgcccc gcgggaggtg cgggaggggg gctacgcccg gcaccggggc ctgggcgtgg
     1681 agggccgtgt cgccttgctc aagggggacc gggtcaccct ggagaccccc cagggccgcc
     1741 gcctggaatg ccgcctcggc gaactggaac ccatcggggc ccgggaggcc gaacccaggc
     1801 cctccggcaa ggtccgggtg cgggccgaag ccctggacat cgaatccgag atcaacctca
     1861 tcggccgggc cagcgacgag gtggacagcg aaatctaccg cttcgtggag gaggccctgg
     1921 ccggcggccg gcgcttcatc cgcatcgtcc acggccacgg caccggccgg ctgaaggccg
     1981 ccgtccggga ggccctgcgg ggccaccccg gcatttcccg ggtggaggac gccccccaga
     2041 accagggcgg agccggggcc acagtcgtca ccctgaggta gggccccaaa attcaacccc
     2101 tggagggagc cgtccgatcc ggaaggcaga cctctcaggg gcggccatgt cattctggaa
     2161 caacctcaac gtccgcaaga agctgctgta ttccatcctc gccctggcga tggtgctggg
     2221 cgcggcggcg acgatcttct ccctctggcg cctcaacacc gccctgaacg atggcctcaa
     2281 gctggaggcc ggaagcctgg cctccctggt ttcggacggc atccagtccg gcgtccagtt
     2341 cgaggacatg ggcctggtgg aacgcgggct cgatgggatg aaggacaatc acgacatcac
     2401 ccaggcggcc ctggtcagcc tggatcccgc caccaatgcg gccaaggtgg tgaccaagtc
     2461 caaggccaag gcctcgcaga tcgacctggc ccccttcgcc gaggccttcc tcaagg
//
LOCUS       DASUDT010000245         3357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1005976, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000245 DASUDT010000000
VERSION     DASUDT010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3357
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1005976"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..1284
                     /locus_tag="VFV26_05060"
     CDS             259..1284
                     /locus_tag="VFV26_05060"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEX4845566.1"
                     /translation="MSRPTFRQPAEWDRHSACWLAWPSHGHLWQENLAPAQAEWTALC
                     LAMAEHGGEDLDILVQDAAAEAEARAALAPVIGQVRFHRVPVGDIWLRDTAPIFVKDG
                     AGTLHAACFGFNGWGRKYLLPDDDRVAGRVAVLSGCARRDHAWILEGGSVEVDGEGTV
                     LTTRQCLLNPNRNPGLDQAEIEAALADGLGAEKVLWLDEGLLNDHTDGHIDTLARFVA
                     PGVVVCMQAADPVDPNAATLDRLAADLAAMTDAKGRKLQVVRIPSPGLVENEEGEPLP
                     ASYVNFYIGNRSVVVPTYGTAFDEPAVTAIAGLFPGHRTVGRSARAILSGGGAFHCIT
                     QQQPEVL"
     gene            1538..2377
                     /gene="aguB"
                     /locus_tag="VFV26_05065"
     CDS             1538..2377
                     /gene="aguB"
                     /locus_tag="VFV26_05065"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR03381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0050126 - N-carbamoylputrescine amidase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidase"
                     /protein_id="HEX4845567.1"
                     /translation="MVRVAATQCAFTASLDENVARVEALVRQAAAQGAQVILPSELFE
                     GPYFCREEKDEFFDWAKPLEGHPTIARFQKLAEELGVVIPVSFFEKDGPHHYNSLAMV
                     DADGSLLGVYRKSHIPDGPGYEEKFYFRPGNTGFKVWDTRFGRVGVGICWDQWYPECA
                     RAMMLMGAEILMYPTAIGTEPENPGLDTKDLWQRAMIGHAVSNVVPVIASNRIGTEGD
                     QTFYGHSFIADHRGDKVAELGRAASGVITADLDLDEIRRNRASFGFFRDRRPELYGLL
                     AER"
     gene            complement(2387..>3357)
                     /locus_tag="VFV26_05070"
     CDS             complement(2387..>3357)
                     /locus_tag="VFV26_05070"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4845568.1"
                     /translation="TFLVVYRLSLRITGPLKELADGLGRSDLTLQLPVSSQDEVGQAA
                     AAFNAYNGRLRSVFHELTGSSTSVASGATQLSASSEQMAATGDTLAQNSEAQRGAFER
                     VAAAVTELSASIEQVSRTIQRSQRESETAVAAVARGAQAGAESAKAMEEIRTAASGMV
                     TAVRLIQDIARQTNLLSLNAAIEAAKAGAMGKGFAVVAEEVRKLAERSGAAAREIGEL
                     IERSNASVDQGAMMVSDTVNALATIDANIQGLAAMILEVGAAADEQARTSAEVAEQVD
                     INLDRVAHNATATREMARAVAEVARTAADLAGVAESQNHLVGQFKV"
BASE COUNT          496 a         1155 c         1176 g          530 t
ORIGIN      
        1 tcccgtgcgg ctgataccgg ggcggcggct tcctgggccg gagcggcgcc ccagaccagg
       61 aagaggaccg gcatgagcgc ggcacgcagg acgcgggtca aggtcatggg agctccgggg
      121 gataggcatc atgatacgcg gcatgcatgc ctccgggcgg attcctgtcc ctgcagcatt
      181 aaggctcgac ggggggaggc ccttttgctg aactggaggg tgcgcttcag ggcgtcctgt
      241 tttctggggt ttccgaccat gtcccgtccg accttccgcc agcccgccga gtgggaccgt
      301 cacagcgcct gctggctggc ctggcccagc cacggccacc tctggcagga gaacctggcc
      361 ccggcccagg cggaatggac ggccctctgc ctggccatgg ccgagcacgg aggcgaggat
      421 ctggacattc tggtgcagga tgccgccgcc gaggccgagg cccgggcggc cctggcgccc
      481 gtgatcggcc aggtgcgctt ccaccgggtg cccgtggggg acatctggct gcgcgacacc
      541 gcgcccatct tcgtgaagga cggggcggga accctgcacg ccgcctgttt cggcttcaac
      601 ggctggggcc ggaagtacct gctgccggac gacgaccggg tggcgggccg cgtggccgtt
      661 ctgagcggat gcgcccggcg cgaccacgcc tggatcctcg agggtggctc cgtggaggtg
      721 gatggcgaag gcaccgtgct caccacccgc cagtgcctgc tcaaccccaa ccgcaatccc
      781 ggtctggacc aggcggagat cgaggcggcc ctggcggacg gcctgggcgc cgaaaaggtg
      841 ctgtggctgg acgagggcct gctcaacgac cacacggacg gccacatcga caccctggcg
      901 cgattcgtgg cgccgggtgt ggtggtctgc atgcaggcgg cggatcccgt cgatcccaac
      961 gccgccacct tggaccgcct ggccgcggac ctggccgcca tgaccgatgc gaagggacgg
     1021 aagctccagg tggtacgcat cccctcgccg ggtctcgtgg aaaacgaaga gggcgaaccc
     1081 ctgcccgcca gctacgtgaa cttctacatc ggcaaccgca gcgtggtggt gcccacctac
     1141 ggcacggcct tcgatgagcc ggccgtgacc gccatcgccg gcctcttccc cggccaccgc
     1201 accgtggggc gctccgcccg cgccatcctc agcgggggcg gcgccttcca ctgcatcacc
     1261 cagcagcagc cggaggtcct gtgatcaccg ttcgccttca aatgtcaaag attcaccacg
     1321 gagacacaga gcatgggctc agggaaggcg ccgggttcgg attccccaag aagaatccgt
     1381 gctcggcgcc ttccctggct tccagcgcag ctggaagagg ccttcggcct gcccatgtca
     1441 gagggaacac ggagaccgcc gtgacaactc cgtgcgctcc gtgtctccgt ggtggatttc
     1501 ttttgtttaa ccgttgcctg ggaggagccc tttgaacatg gtccgcgtcg ccgccaccca
     1561 gtgcgccttc acggccagcc tcgacgagaa cgtggcccgg gtggaggccc tcgtgcgcca
     1621 ggccgcggcc cagggcgccc aggtgatcct gccttccgag ctgttcgagg ggccctactt
     1681 ctgccgcgag gagaaggatg agttcttcga ctgggcgaag cctctggagg gccaccccac
     1741 catcgcgcgc ttccagaagc tggcggaaga gctgggcgtg gtgatcccgg tctccttctt
     1801 cgagaaggac ggcccccacc actacaacag cctggccatg gtggacgccg acggatcgct
     1861 gctgggcgtc taccgcaaga gccacatccc cgacggcccc ggctacgagg agaagttcta
     1921 cttccggccc ggcaacacgg gcttcaaggt ctgggacacc cgcttcggca gggtcggcgt
     1981 gggcatctgc tgggaccagt ggtaccccga gtgcgcccgg gccatgatgc tcatgggcgc
     2041 cgagatcctg atgtacccca cggccatcgg caccgagccg gagaaccccg gcctcgacac
     2101 caaggatctg tggcagcggg ccatgatcgg ccacgccgtg tccaacgtgg tgcccgtcat
     2161 cgcctccaac cgcatcggca ccgaagggga ccagaccttc tacggccact ccttcatcgc
     2221 ggaccatcgc ggtgacaagg tggcggagct gggccgcgcc gcctccggcg tgatcacggc
     2281 ggacctcgat ctggatgaga tccgccgcaa ccgcgcgtcc ttcggcttct tccgggaccg
     2341 gcgtccggag ctgtacggac tgctggctga acgctgacca gcagccctac accttgaact
     2401 gccccaccag gtgattctgg ctctcggcca cgcccgccag gtcggcggcg gtgcgggcca
     2461 cttcggccac ggcccgggcc atctcccggg tggcggtggc attgtgggcc acgcggtcca
     2521 ggttgatgtc cacctgctcg gccacctcgg cgctggtgcg ggcctgctcg tccgcggcgg
     2581 cacccacctc gaggatcatg gccgccaggc cctggatgtt cgcatcgatg gtggcgaggg
     2641 cgttcacggt atcggagacc atcatggcgc cctggtccac ggaggcgttg ctgcgctcga
     2701 tgagttcgcc gatctcccgg gccgcggcgc cgctgcgctc cgccagcttg cggacctcct
     2761 cggccaccac ggcaaagccc ttgcccatgg ccccggcctt ggcggcctcg atggcggcgt
     2821 tgaggctgag caggttcgtc tgccgggcga tgtcctggat gaggcgcacg gccgtgacca
     2881 tgccggaggc ggcggtgcgg atctcctcca tggccttggc gctttcggcg cccgcctggg
     2941 cgccgcgggc gacggcggcc acggcggttt cggattccct ctgggagcgc tggatggtcc
     3001 gggagacctg ctcgatggag gcggagagct cggtgacggc ggcggccacg cgttcgaagg
     3061 ccccgcgctg ggcctcggaa ttctgggcca gggtgtcccc ggtggcggcc atctgctcgc
     3121 tggaggcgga gagctgcgtg gcgccgctgg ccacggaggt ggaggatccg gtcagctcgt
     3181 ggaagaccga ccgcagccgc ccgttgtagg cattgaaggc ggccgcggcc tggcccacct
     3241 cgtcctggct ggacacagga agctgcaggg tgaggtcgct ccggcccagg ccgtcggcca
     3301 gctccttcag gggcccggtg atgcgcaggc tgaggcggta caccaccagg aaggtga
//
LOCUS       DASUDT010000246         4036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_254719, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000246 DASUDT010000000
VERSION     DASUDT010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254719"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1835)
                     /locus_tag="VFV26_05075"
     CDS             complement(<1..1835)
                     /locus_tag="VFV26_05075"
                     /inference="COORDINATES: protein motif:HMM:NF037626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX4845569.1"
                     /translation="MNVASPDLKDLLRLAEAPADVLTAPEARLRWTTPPALALVLARW
                     ITRGGRIQSLWVDAPTEAEARTLAQDLQALLPEAGVAHFPGFSPYAGGESSPPGMVLR
                     DRLSALVGLLERRVQVLVTGPLAACEKLPHPTWFQKQKLELRTGAEVPRDLLLETLIA
                     LGYRRTEMASAPGEFSSRGMVVDLWPDHLAQPLRLETFGDELERLSPFDPDTQRRTGE
                     SLESLTLYPRFEGDRGDGRALLDAVASRADRTPEPEDDLAFRRARLATHGHFPGEELF
                     HPLLAQPKGQLTHWVPPCLRVRLEGAWEEALREAERTRIEEGLAALRRGGVVCPDFED
                     RFLPSDPSRPTFHLTEWQSEATVPLAALPLKEFQGRLADLAAHAQELALTGHRVFLAG
                     STPGMKGRFAEFLRDYDLPQAYGTETGCRAIQLSLSAGVHLKEPALVVFTEREIFGRK
                     AVQAAPKKSRSAAFLSDLRDLKPGDRVVHLDHGIGEFVGFATLTVGGEEQEVLQLRYA
                     DGGQLNVSLERADLMQRYTGAEGHLPPLDKLGGASWAKVKRKAKKAIRDMADELLKLY
                     ALRKLEKGHAYPPDGPDMAAFDASVPVTPTPDQIEAIEAVKADLES"
     gene            2075..>4036
                     /locus_tag="VFV26_05080"
     CDS             2075..>4036
                     /locus_tag="VFV26_05080"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845570.1"
                     /translation="MAHRAHRKHRWSLSAHLTWVVLLALVPALLIQYASNLEVRREAR
                     TRAQEQALQLVGDLADQQEQITTSARQMLTTLSFLPEVQRKEGSSLSRILKALQQEDP
                     RFSDIFALDPQGRAFASATTVLLNTTALDRKYFWEALESRRFSVGEYSIGRSTGTRTL
                     HFSQPVLNPQGGLAAVLVAAYDLERYSEVFDRTSLPPGTSLAVLDHRGTVLYGISAPG
                     DPKGSLVGRTLPSDQMAAMAGKNQGTYWAGQGGGDTMLFAYHQVRAPGQAKPYLFIRL
                     GRPEIQVLAASEALFRRNSALMVIVGILALAAAWIMGDRMIASPIRRLVKASRRIASG
                     NLGLRPKVGTGSREVAELAEELGEMNLALAQREEEQSRIQDALGHAQKMESLGVLAGG
                     IAHDFNNLLAVVLGNLNLAQMHLGQSTPVQHPLDQAERAVIKASGLARQLLAYSGHGH
                     FVVRIHDLNRMLEEMANLLQTPLSRKVRLSLHLGPELPSINADGAQVQQMVLNLVTNA
                     AEAIGCEEGTVTLRTAAQNLSAADLLAKCPAQDLAPGPYVVLEVSDTGCGMGPDLIQR
                     IFDPFFTTKTAGRGLGLSAIHGILKGHGAGLCIESEPGRGSTFQILFPANPQGVQPPA
                     EMAPGQATRFGGMALVADDEPMVREFAAAA"
BASE COUNT          637 a         1388 c         1373 g          638 t
ORIGIN      
        1 gactccaggt cggccttcac cgcctcgatg gcttcgatct ggtccggcgt gggcgtgacg
       61 gggacgctgg catcgaaggc cgccatgtcc ggcccgtccg gcgggtaggc atggcccttc
      121 tccagcttgc gcagggcgta gagcttcagc aactcgtcgg ccatgtcgcg gatggccttc
      181 ttggccttgc gcttgacctt ggcccaggag gcgccgccca gcttgtccag gggcggcagg
      241 tggccctcgg cgccggtgta gcgctgcatg aggtcggccc gctcgaggct cacgttcagc
      301 tgaccgccgt ccgcgtagcg cagctgcagc acctcctgct cctcgccgcc cacggtaagc
      361 gtggcgaagc ccacgaattc gccgatgccg tgatccaggt gcaccacccg gtcgccgggc
      421 ttgaggtccc gcaggtccga caggaaggcc gcgctgcggg atttcttggg cgccgcctgc
      481 acggccttgc ggccgaagat ctcgcgctcg gtgaagacga cgagggcagg ctccttaaga
      541 tggacgccgg cgctcaggga gagctggatg gcccggcagc cggtctcggt gccgtaggcc
      601 tggggcaggt cgtagtcccg gaggaactcc gcgaagcggc ccttcatgcc cggcgtggag
      661 cccgcgagga acacccggtg gcccgtgagc gccagctcct gcgcgtgggc ggccaggtcc
      721 gccaggcggc cctggaattc cttcaggggc agggccgcca ggggtacggt ggcctcgctc
      781 tgccactcgg tgaggtggaa ggtgggccgg ctgggatcgg agggcaggaa gcggtcctcg
      841 aaatcggggc agaccacgcc gccccggcgc agggccgcca ggccctcctc gatgcgggtc
      901 cgttcggcct cgcgcagcgc ctcttcccag gcgccctcaa ggcggacgcg caggcagggc
      961 ggcacccagt gggtcagctg gcccttgggc tgggccagca gcggatggaa cagttcctct
     1021 ccggggaagt gaccgtgggt ggccagcctg gcccggcgga aggccagatc atcctcgggt
     1081 tccggcgtgc gatccgcccg ggaggccacg gcgtccagca gggcccggcc atcgccgcgg
     1141 tcgccttcga agcggggata gagcgtgagc gattccagcg attcgccggt gcggcgctgg
     1201 gtgtcgggat cgaagggcga caggcgctcc agctcgtcgc cgaaggtctc caggcgcagg
     1261 ggctgggcca ggtggtcggg ccataggtcc accaccatgc cgcgggagct gaattcgccc
     1321 ggggccgagg ccatctccgt gcggcggtag cccagggcga tcagggtctc cagcagcagg
     1381 tcccggggca cctcggcgcc ggttctcagt tccagcttct gtttctggaa ccaggtggga
     1441 tggggcagct tctcgcaggc ggccaggggc cccgtcacca gcacctggac gcggcgctcc
     1501 agcaggccca ccagggccga gaggcggtcc cgcagcacca tgcccggcgg gctgctctcg
     1561 cctccggcat aaggcgagaa acccgggaaa tgggccacgc ccgcctcggg cagcagggcc
     1621 tggaggtcct gggccagggt gcgggcctcg gcttccgtgg gcgcgtccac ccacagggac
     1681 tggatgcggc ccccgcgggt gatccagcgg gccaggacca gggccagggc cggcggggtg
     1741 gtccagcgga ggcgtgcctc cggggcggtg aggacatccg caggggcctc ggccaaacgc
     1801 aggagatcct tcaggtcagg gctggcaaca ttcatagcgt tcttcagagt gcctgatggc
     1861 ggccctggcg acgaggtttg attgcggcag ggcgccgggc ccagcctcga acacggcatg
     1921 aatgggcaac aaaaacccag tcatctccac ggctgaactc aggttgggct gggctatcat
     1981 ctaacttgac ctgagggtcg tgatctaagt cattcatggt tccaccccgg tgcccgatga
     2041 ttcggatgtg tcagtttgaa agggcacaga tctcatggct caccgagccc accgtaagca
     2101 ccgctggagc ctgagcgccc acctgacgtg ggtggtgctc ctggccctgg tcccggccct
     2161 cctgatccag tacgcatcca atctcgaggt tcgccgggag gcccgcaccc gggcccagga
     2221 gcaggcgctc cagctcgtgg gcgaccttgc ggaccagcag gaacagatca ccacctcggc
     2281 ccgtcagatg ctcaccaccc tctccttcct gccggaggtg cagaggaagg aggggagttc
     2341 cctcagccgg attctgaagg ccctccagca ggaggatccc cggttctccg atatcttcgc
     2401 cctcgacccg cagggccggg ccttcgcctc ggccaccacg gtactgctca acaccacggc
     2461 cctggaccgg aagtatttct gggaggccct ggaatcccgg cgattctccg tgggggaata
     2521 ttccatcggc cgcagcacgg ggacccggac cctccatttt tctcagccgg tcctgaaccc
     2581 ccaggggggc ctggccgccg tcctggtggc cgcctacgac ctggagcgct acagcgaggt
     2641 cttcgaccgc accagcctcc cgccgggaac ctctttggcg gtcctggacc accgcggcac
     2701 cgtcctttat ggcatttccg ctccgggcga cccgaagggt tccctcgtgg gccggaccct
     2761 tccctcagac cagatggccg ccatggcagg caagaaccag ggcacctact gggccggcca
     2821 aggtggagga gacaccatgc tgttcgccta ccaccaggtc cgggcgccag gccaagccaa
     2881 gccgtacctc ttcatccgcc tgggccggcc ggaaatccag gtgcttgcgg cgagcgaggc
     2941 cctcttccgc cggaattcgg ctctgatggt gatcgtcgga atcctggccc tggcggccgc
     3001 ctggatcatg ggcgaccgca tgatcgcctc gcccatccga aggctggtca aggcctcccg
     3061 gcgcatcgcc agtggaaatc tcggtctccg gcccaaggtg gggacgggat cgcgggaagt
     3121 ggccgaactc gccgaggaac tcggtgaaat gaacttggcc ctggcccagc gtgaagagga
     3181 gcagtcccgg attcaggatg ctctgggcca cgcccagaaa atggagagcc tgggggtgct
     3241 ggctggaggc atcgcccacg acttcaacaa cctgctcgcc gtcgtcctgg ggaacctcaa
     3301 cctggcccag atgcatttgg gccaaagcac gcccgtccag caccccttgg atcaggctga
     3361 acgggccgtg atcaaagctt cgggcctcgc ccgccagctc ctggcctatt ccggccacgg
     3421 tcatttcgtg gtccggatcc atgacctgaa ccggatgctg gaagagatgg ccaacctcct
     3481 ccagaccccc ttgtcgagga aggtccgcct gtcgctccac cttgggccgg aactcccctc
     3541 catcaatgcc gatggggccc aagtccagca gatggtgctc aacctggtga ccaacgccgc
     3601 ggaggccatc ggttgtgagg agggaaccgt caccctccgg acagcggccc agaacctgag
     3661 cgccgcggac ctcctggcta agtgcccggc ccaggatctt gctccgggcc cctatgtggt
     3721 gctggaggtc tccgataccg gatgcggcat gggccccgac ctcatccaac gcatcttcga
     3781 ccccttcttc accaccaaaa ccgccggccg cggcctcggc ttgtccgcca tccacgggat
     3841 cctcaaaggg catggagcgg gcctgtgcat cgagagcgaa ccaggccggg gcagcacctt
     3901 ccagatcctc ttcccggcca atcctcaggg ggtgcaaccg cccgcggaga tggccccggg
     3961 ccaggccacc cgtttcggcg gcatggccct ggtggcggac gacgagccga tggtccgtga
     4021 attcgccgcc gccgcc
//
LOCUS       DASUDT010000247         5046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_542421, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000247 DASUDT010000000
VERSION     DASUDT010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5046
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542421"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VFV26_05085"
     CDS             complement(<1..267)
                     /locus_tag="VFV26_05085"
                     /inference="COORDINATES: protein motif:HMM:NF013380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEX4845571.1"
                     /translation="MTFPHSPFKIRDIEVPNRLVMAPLHEITDQPFRKFIREIGGVGL
                     VVSEMISSEALIRHAVKAEKMMAATGERPLSMQISGGRPEALAEG"
     gene            complement(432..1694)
                     /gene="rho"
                     /locus_tag="VFV26_05090"
     CDS             complement(432..1694)
                     /gene="rho"
                     /locus_tag="VFV26_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX4845572.1"
                     /translation="MSLQELKELSIGKLAELAKDLQIENPLAMRKQELVFRVLQAQAE
                     REGQFFAEGVLEVLPEGFGFLRSPDQNYLAGPEDIYISPSQIRKFNLRTGDTLSGMIR
                     APKEGEKFFAMLRVDAVNFDPPMMAKERLHFDDLVPLYPKHHLRMERDAQELSTRVMD
                     LMTPLGKGQRALIVAPPRTGKTVLLQNIANSITANHPEVFLIVLLIDERPEEVTDMER
                     SVKGEVVSSTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVP
                     PSGKVLSGGVDSNALQRPKRFFGAARNIEAGGSLTIIATALIETGSRMDDVIFEEFKG
                     TGNSEIVLDRKLSDKRIFPAMDIQKSGTRKEDLLIDAAKLAKIWVLRKILSASGPSES
                     MELLVDRLGKAKTNDEFLANLQEPPPRR"
     gene            complement(1791..2624)
                     /locus_tag="VFV26_05095"
     CDS             complement(1791..2624)
                     /locus_tag="VFV26_05095"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4845573.1"
                     /translation="MKPQPAFAALPSGLKLHYRVQGNPQGPWLVLLNGLLSDTTMWAG
                     VLPGLADRYRILTFDSRGQGRSDAPEAGPYPTALLAEEAWELFGVLGVARPWLVGLSN
                     GSAMSLELLAAHPGAFAGAVLTSAMPRFDIAMGLKAEHWARCLEVGGPLMQFDAVAPF
                     LWGDAFLEARHGVLRAYHQVVTGGDKPQHGNLHQIRGTLGWDIRGRLGLIQDPVLLLC
                     GAEDLLTPPWKCLETARGISGSRFEVVPGIGHAYPVEDPRGFVARVRRFMDKDEVGFG
                     R"
     gene            complement(2621..3100)
                     /locus_tag="VFV26_05100"
     CDS             complement(2621..3100)
                     /locus_tag="VFV26_05100"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX4845574.1"
                     /translation="MCTLLLIRHGIAEDPRPGQRDADRALTEEGWAKTRAAMKGLVAQ
                     GYAPTRGFSSPYRRAMETMACLQAAAGAFPMETSVGLMPDGRVSQADLWLRGLAAEAP
                     GGRLALVSHQPFLGELIFHLTGRGLEVKKASCTVIRWEDGAWRFERQFQPSELRHRP"
     gene            3300..4913
                     /locus_tag="VFV26_05105"
     CDS             3300..4913
                     /locus_tag="VFV26_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4845575.1"
                     /translation="MSDTTFAALGCNEALLAALAKRGFETPMPVQAQTFKPGLEGRDL
                     LVQSRTGSGKTLAFGLPLLHRLSDERHPQALILAPTRELAQQVGAELHSLVPKLPIAS
                     LVGGVAYPPQIRALQMGSPVVVGTPGRIMDHLNRGTLDLSRVSMIVLDECDEMLNMGF
                     LEDVETILAKVPAGPQTYLFSATLPAPIAKLAKRFLKDPVQITLAEAGEHAVHADIAH
                     TPVIVPDHQQVRALVNLLLLDQPSAALIFTKTKAQTEEVAEELTVSGLPAAFLHGDLA
                     QATRTRILGQFKDGKLRYLVATDVAARGLDISGLPLVVHVGIPTQLENYIHRSGRTGR
                     AGAKGSSLALVSWKESRILLAWSRRGGLQLDWRAVPTPAEIREAQAAKLLDGIQGSAS
                     AALLHQATQLLKDADPVRLVAGLLGLVQADQASGFDLPNEPERKAKPRFDNPRERKEG
                     GPRPQRSYAERSAARGDSPRPDSAFSKTRPDGSFKPRSEFDEKPRPYVKPKPGAPAGP
                     RKAWEDRPGPKKPAAKFADDRPPRPWKKK"
BASE COUNT          776 a         1790 c         1674 g          806 t
ORIGIN      
        1 gccctcggcc agggcctcgg ggcgcccgcc ggagatctgc atggacaggg gccgctcgcc
       61 cgtggccgcc atcatcttct ccgccttcac cgcatgccgg atcagcgcct cgctgctgat
      121 catctccgaa accaccagcc ccaccccgcc gatctcccgg atgaacttcc ggaagggctg
      181 gtcggtgatc tcatggagcg gcgccatcac gaggcggttg ggcacctcga tgtcgcggat
      241 cttgaatgga gagtggggga aggtcactta gcggctcgct tgcgaccttt cagtttagcc
      301 ggggctctga atttggcctg cggccaaatt cagagcaggg gaggctggcg cctccccatt
      361 caaatgggtg agaaacgcga agcgtttccc atactcggaa tccggcgcag ccggattccg
      421 agcaggagcg gctacctacg cgggggcggc tcttggaggt tcgccaggaa ctcgtcgttg
      481 gtcttggcct tgcccaggcg gtccacaagc agctccatgc tttcgctggg gccgctggca
      541 ctgaggatct tgcggagcac ccagatcttg gcgagcttgg cggcgtcgat gagcagatcc
      601 tccttgcggg tgccggactt ctggatgtcc atggcgggga agatgcgctt gtcgctgagc
      661 ttgcggtcca gcacgatctc gctgttgccg gtgcccttga actcttcgaa gatcacgtcg
      721 tccatgcggc tgccggtctc gatgagggcc gtggcgatga tggtgaggct gccgccggcc
      781 tcgatgttgc gggccgcgcc gaagaagcgc ttgggccgct ggagggcgtt ggagtccacg
      841 ccgccggaga gcaccttgcc gctgggcggc accacggtgt tgtaagcgcg gcccaggcgc
      901 gtgatggaat ccagcaggat caccacgtcc ttcttgtgct ccacgaggcg cttggccttc
      961 tcgatgacca tctcggccac ctggacgtgg cgggtggcgg gctcgtcgaa ggtgctcgat
     1021 accacctcgc ccttcacgct gcgctccatg tccgtcactt cctcgggccg ttcgtcgatg
     1081 agcagcacga tgaggaagac ttccgggtgg ttggccgtga tggagttggc gatgttctgc
     1141 agcagcacgg tcttgcccgt gcggggcggg gccacgatga gggcgcgctg gcccttgccc
     1201 agcggcgtca tcaggtccat gacgcgagtg ctcagctcct gggcgtcgcg ctccatgcgc
     1261 aggtggtgct tcgggtacag gggcaccagg tcgtcgaagt ggaggcgctc cttggccatc
     1321 atcgggggat cgaagttcac ggcgtccacc cgcagcatgg cgaagaactt ctcgccctcc
     1381 ttgggggccc ggatcatgcc cgagagcgtg tcgccggtgc gcaggttgaa tttgcggatc
     1441 tggctggggg agatgtagat gtcctcgggg cccgcgaggt agttctggtc ggggctgcgc
     1501 aggaagccga agccctcggg cagcacctcc agcacgccct cggcgaagaa ctgcccctcg
     1561 cgctcggcct gggcctgcag cacgcggaac accagctcct gcttgcgcat ggcgaggggg
     1621 ttctcgatct ggaggtcctt cgccagctcg gcgagcttgc cgatggagag ctctttcagt
     1681 tcctgcaggc tcaggacggt cggggactgg ttctgggtgg ccataggtca ccttgggaca
     1741 gggcgagtcg gaagtggctc ggggagggtt tgatggtagg ccagaaacct ctatcgtcca
     1801 aacccgacct cgtctttatc catgaaccgg cgaaccctgg ccacgaatcc cctggggtcc
     1861 tccaccgggt aggcgtgccc gatccccggc accacttcga agcggctgcc ggagatgccc
     1921 cgggccgtct ccaggcactt ccaggggggt gtcagcaggt cctcggcccc gcacagcagc
     1981 agcaccgggt cctggatgag gcccaggcgc ccgcggatat cccagcccag ggtgccccgg
     2041 atctggtgca ggttgccgtg ctggggcttg tcccctccgg tcaccacctg gtggtaggcc
     2101 cgcagcacgc cgtgtcgggc ctccaggaaa gcgtcgcccc acaggaaggg cgccaccgca
     2161 tcgaactgca tgaggggacc gcccacctcc aggcagcggg cccagtgctc ggccttgagg
     2221 cccatggcga tgtcgaaccg gggcatggcg ctggtgagta ccgctccggc gaaggcgccg
     2281 ggatgggcgg ccagcagctc caggctcatg gcgctgccgt tggaaagacc caccagccag
     2341 gggcgcgcca cacccaggac cccgaacagc tcccaggcct cctcggccag cagggccgtg
     2401 ggataggggc ccgcctccgg cgcatcggat ctcccctggc cccggctgtc gaaggtgagg
     2461 atgcggtagc ggtccgccag gcccggcagg acgcccgccc acatcgtcgt gtccgacagc
     2521 aggccgttca gcagcaccag ccagggcccc tgcggattcc cctgcacgcg gtagtggagc
     2581 ttcagccccg agggcagcgc ggcgaaggcg ggctggggct tcatgggcgg tgcctcagtt
     2641 ccgaaggctg gaactggcgc tcgaagcgcc aggcgccgtc ctcccagcgg atgacggtgc
     2701 agctggcctt cttcacctcc agaccgcgtc cggtgaggtg gaagatcaac tcgcccagga
     2761 aaggctggtg gctgacgagg gccagcctgc cgccgggagc ctcggccgcc aggccccgca
     2821 accagaggtc cgcctgggac acgcggccat cgggcatcag gcccacggag gtctccatgg
     2881 ggaaggcccc ggccgccgcc tggaggcagg ccatggtctc catggcgcgg cggtaggggc
     2941 tgctgaagcc ccgggtgggc gcataccctt gggccaccag gcccttcatg gcggcgcggg
     3001 tcttcgccca gccttcctcc gtgagggccc ggtccgcatc ccgctggccg ggccggggat
     3061 cttcagcgat gccgtggcgg atgaggagga gcgtgcacat tctgcgatct taacgccccc
     3121 gcttcccccg cgcttccgat ccacgctgcg ttcccatcgg gcgcgacccg ctatttaccc
     3181 ttgtttttca aggcttttca ggagatgata gccgtttggg cccctcccgg ctggcgctgt
     3241 ccgccaacag agactgccac ttcggcacac tcgcgcaggg atagccccgg gagataccag
     3301 tgagtgatac gacctttgca gccctcggct gcaacgaagc ccttttggcc gccctggcca
     3361 agcgcggctt cgagaccccc atgcccgtgc aggcccagac cttcaagccg ggcctcgaag
     3421 gccgcgacct gctggtgcag agccgcaccg gctcgggcaa gaccctggcc ttcggcctgc
     3481 ccctgctgca ccggctcagc gacgagcgcc acccccaggc cctgatcctc gcccccacgc
     3541 gggagctggc ccagcaggtg ggcgccgagc tgcacagcct cgtgcccaag ctgcccatcg
     3601 cctctctcgt gggcggcgtg gcctacccgc cccagatccg ggccctgcag atgggctcgc
     3661 ccgtggtcgt gggcaccccc ggccgcatca tggaccacct gaaccgcgga acgctggacc
     3721 tgagccgcgt gagcatgatc gtcctcgacg agtgcgacga gatgctcaac atgggcttcc
     3781 tcgaagatgt ggagaccatc ctggccaagg tgcccgcggg cccccagacc tacctgttct
     3841 ccgccaccct gcccgccccc atcgccaagc tggccaagcg cttcctcaag gatcccgtgc
     3901 agatcacgct ggcggaggcc ggcgaacacg ccgtccatgc cgacatcgcg cacacgcccg
     3961 tgatcgtgcc cgaccaccag caggtgcgcg cgctcgtgaa cctgctgctg ctggaccagc
     4021 ccagcgctgc cctgatcttc accaagacca aggcccagac cgaggaagtg gccgaggagc
     4081 tcaccgtctc gggcctgccc gcggccttcc tccacggcga cctcgcccag gccacccgca
     4141 cccgcatcct ggggcagttc aaggacggca agctgcgcta cctggtggcc accgacgtgg
     4201 ccgcccgcgg cctggacatc agcggcctgc ccctcgtggt gcatgtgggc atccccacgc
     4261 agctcgagaa ctacattcac cgcagcggcc gcacgggccg ggccggggcc aagggctcca
     4321 gcctcgccct ggtgagctgg aaggaaagcc gcattctgct ggcctggagc cgccgcggcg
     4381 gcctccagct ggactggcgc gccgtgccca ccccggccga aatccgcgag gcccaggccg
     4441 ccaagctcct ggacggcatc cagggctccg ccagcgcggc gctcctccac caggccaccc
     4501 agctgctgaa ggatgccgat cccgtgcgcc tggtggcggg cctgctgggc ctcgtccagg
     4561 cggaccaggc ttcgggtttc gacctgccca acgagcccga acgcaaggcc aagccccgct
     4621 tcgacaatcc ccgcgagcgc aaggagggcg gcccccgtcc ccagcgcagc tacgcggaac
     4681 gcagcgccgc ccgcggcgat tcgccccggc ccgattcagc cttctccaag acccgccccg
     4741 atggcagctt caagccgcgc agcgagttcg acgagaaacc ccgcccctac gtgaagccta
     4801 agcccggcgc ccccgccggc ccccgcaagg cctgggagga ccgccccggc cccaagaagc
     4861 ctgcggccaa attcgccgat gaccggcccc cgaggccctg gaagaagaag tagggttctt
     4921 cactctctac ctccaaaacg cagggcgcca gctggcgccc tgcgttttgg agcctaccca
     4981 ttcggatccg tctcattcag gtccacgggc ttgggggctt cctccaccac cttgggccgg
     5041 ccccag
//
LOCUS       DASUDT010000248         2617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1470092, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000248 DASUDT010000000
VERSION     DASUDT010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470092"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="VFV26_05110"
     CDS             complement(<1..352)
                     /locus_tag="VFV26_05110"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4845576.1"
                     /translation="MTHESWTWAQIPDQTGRVAVVTGATSGTGFEAARLLAARGARVV
                     LACRNLPKAEEAARRIGVLHAGARVEVQALDLASLASVRAAATDILARFDRLDLLLNN
                     AGVMVPPYGKTEDGF"
     gene            442..1023
                     /locus_tag="VFV26_05115"
     CDS             442..1023
                     /locus_tag="VFV26_05115"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4845577.1"
                     /translation="MGREKKARVLEAAESVFLRFGYRRTTMGDLAAAAGMSRPALYLV
                     FCNKEEVFEAVLRAHVTRTLGEIRQGLAKHPTPEEKLRFAFDLWAVRPFGFFEASPEL
                     REPLHGGLTFAKEAIDQAIAAFEAELVAILAPLSAGAPAKALPPGQIARVLTRAVHGF
                     KESAKDAGELRAMIDGLLEMVLASLRPAPGPGV"
     gene            1048..1977
                     /gene="murB"
                     /locus_tag="VFV26_05120"
     CDS             1048..1977
                     /gene="murB"
                     /locus_tag="VFV26_05120"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX4845578.1"
                     /translation="MTRPLPDDLLKVPHRRDVSFARLTTLGVGGLCRWLFEPTTEAEA
                     QAFVRACAREGLPWRVLGGGSNLVVLGDVDTPVLRLALPKTVQREATSITAPASHGHI
                     ALAEAAAAAGLSGLEFASGIPGSLGGAIRMNAGAYGHEWVDVLARYRFLTPEGDLVEK
                     APEPGEFRYRWSFLTGGRVVLSATAHLAEGDPAVIRAQVAEYRAKRGTSQPLSKRNAG
                     CIFKNPPGQSAGRLIDQAGLKGLRVGDAEVSPEHANFLVNHGHATAAEFAELMAQVRA
                     KVREASGVDLEPEVEIWAEQSGDRSLESGSTAS"
     gene            2111..>2617
                     /locus_tag="VFV26_05125"
     CDS             2111..>2617
                     /locus_tag="VFV26_05125"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEX4845579.1"
                     /translation="MLPRTRPKRPWLPWARAGITLAVLGGVGWGLMEFGTQYLGLQKL
                     TIEQVNVSGCRGERQAEIQALAEGLVLGKPLFWVDAEELRARIEDKRWVRSLQIRKDP
                     PDRLSLVVEERNPVLWLVRSNGVFLVSDDGILLDRVNQANLSPIPVVVDPASQTDQGL
                     ARLVSAARV"
BASE COUNT          397 a          923 c          896 g          401 t
ORIGIN      
        1 cgaacccgtc ctcggtcttc ccgtagggcg gaaccatcac gccggcgttg ttgaggagca
       61 ggtccagccg gtcgaaccgc gcgaggatgt ctgtggcggc ggctcgcacc gaagccaggg
      121 aggccaggtc cagggcctgg acctccaccc gggccccggc atggagcacc ccgatgcgcc
      181 gcgccgcttc ttcggccttg ggcaggttcc ggcaagccag gaccaccctg gccccgcggg
      241 ccgccagcag gcgggccgcc tcgaagccgg tgccggaggt agccccggtg accacggcca
      301 cccgcccggt ctgatcgggg atctgggccc aggtccaaga ttcgtgggtc atatcgttct
      361 ccacagatga tttgacatcg tgacgaataa tgtcagagag ccaatattga cattcggaca
      421 aattttgtca acactctttc catgggacgt gagaagaagg cccgggtcct ggaggccgcc
      481 gaatccgtat tcctccgctt cggctaccgg cggaccacca tgggtgacct cgccgcggct
      541 gcgggcatgt cccggcctgc cctctacctg gtcttctgca acaaggagga ggtcttcgag
      601 gccgtgctcc gcgcccacgt cacccggacc ctgggggaga tccgccaagg tctggcgaag
      661 caccccacgc ctgaggagaa gctccgcttc gccttcgacc tctgggccgt gcgccctttc
      721 gggttcttcg aggcctcgcc ggagctgcgg gagcccctcc acggcgggct caccttcgcc
      781 aaagaggcca tcgaccaggc catcgcagcc ttcgaggccg agctggtggc catcctcgcg
      841 cccttgagtg cgggcgcccc cgccaaagcc ctcccgcccg ggcagatcgc ccgtgtcctc
      901 acccgagccg tccacggctt caaggaatcc gccaaggatg ccggcgagct ccgcgccatg
      961 atcgatgggc tgctggagat ggtgctggcc tccctccggc ccgcgccggg acccggagtc
     1021 tgaggcggat cgtccatact gggaccgatg acgcgccccc tgcccgatga cctgctgaag
     1081 gttccgcacc ggcgggacgt gtcctttgcg cgcctgacca cactgggcgt gggcgggctc
     1141 tgccgctggc tcttcgagcc caccacagaa gctgaggccc aggccttcgt gcgcgcctgc
     1201 gcccgggagg gcctgccctg gcgggtgctg gggggcggct cgaacctggt ggtgctgggg
     1261 gacgtcgaca cgcccgtgct gcggctcgcc ttaccgaaga ccgtccaacg cgaggccacc
     1321 agcatcacgg cccccgccag ccacggccac atcgcactgg cggaagccgc tgccgccgcg
     1381 gggctgtcgg gcctggagtt cgccagcggc atccccggct ccctgggcgg cgccatccgc
     1441 atgaacgccg gggcctatgg ccacgagtgg gtggacgtgc tggcgcgcta ccgcttcctc
     1501 acccccgaag gcgacctcgt ggagaaggcg ccggagccgg gcgagttccg ctaccgctgg
     1561 agcttcctca ccgggggccg cgtggtgctg tccgccacgg cccacctggc ggagggggat
     1621 cctgcggtga tccgcgccca ggtggccgag taccgggcca agcgcggcac cagccagccg
     1681 ctgtccaaac gcaacgccgg ctgcatcttc aagaacccgc cgggccagag cgccggtcgc
     1741 ctcatcgatc aggcaggcct caagggtctg cgcgtgggcg acgcggaggt gagtccggag
     1801 cacgccaact tcctggtgaa ccacggccac gccaccgccg ccgagttcgc cgagctgatg
     1861 gcgcaggtcc gggcgaaggt gcgggaggcc tccggggtgg acctggaacc cgaggtggag
     1921 atctgggcgg agcagtctgg agaccggagt ctggagtctg gaagtactgc ttcctgaggc
     1981 ggcctgtggc cgcgccgatg atttaccctt gggccgttcg gtggggagcg gccggcccaa
     2041 tgaatcgagc cgtcggcgta cctccagact ccagactccg gactccagac tgtagactga
     2101 ccccgtgtcc atgctccccc gcacccgccc caagcgcccc tggctcccct gggcccgggc
     2161 gggcatcacc ctggcggtgc tgggcggggt gggctggggc ctcatggaat tcggcaccca
     2221 gtacctgggg ctccagaagc tcaccatcga gcaggtgaac gtcagcggct gccggggcga
     2281 acggcaagcc gagatccagg ccctggcgga gggcctggtg ctgggcaagc ccctcttctg
     2341 ggtggatgcg gaagaattgc gcgcacgcat cgaagacaag cgctgggtgc ggagcctcca
     2401 gatccgcaag gacccccccg accgcctcag cctcgtggtg gaggagcgga atcccgtcct
     2461 ctggctggtg cggagcaacg gcgtgttcct cgtttccgac gacggcatcc tcctggatcg
     2521 ggtcaatcag gcgaacctaa gtcccattcc cgtcgtggtg gatcccgcca gccagacgga
     2581 ccagggtctg gcccgactcg tgagcgccgc acgggtt
//
LOCUS       DASUDT010000249         2511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_343284, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000249 DASUDT010000000
VERSION     DASUDT010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343284"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /gene="bshC"
                     /locus_tag="VFV26_05130"
     CDS             complement(<1..314)
                     /gene="bshC"
                     /locus_tag="VFV26_05130"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis BshC"
                     /protein_id="HEX4845580.1"
                     /translation="MSPAPVIATGQQIGAGWSPALSVAKALAALAEARRTGAEAVYWL
                     ADEDHDRTEVASTVGEKEGRLIRHRFRFEARAGSATGWLPWTAAHQAEATALWGTLPE
                     PQ"
     gene            391..864
                     /locus_tag="VFV26_05135"
     CDS             391..864
                     /locus_tag="VFV26_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845581.1"
                     /translation="MLDGMQSVEPWIPPVSPDLARLAMEAADEAGLASLRAWPEVRKG
                     GVGFGGMPPFLCWRGQQDGAWHLVLLQAREAGALVPGARTAPLPEGWLEALDLEALAR
                     PLARHPDFPGGASVHVVHLPGGGTFRVRSHGQAAPDLVAAVLKHTSHIQIWQLAD"
     gene            883..2187
                     /locus_tag="VFV26_05140"
     CDS             883..2187
                     /locus_tag="VFV26_05140"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX4845582.1"
                     /translation="MLSLDFSTLKEAAMAVALGLMMGLERERSGFERSQEAHEGQNRR
                     ESDRLEAQHGSLGARTFALLTLLGWISVKVGGDGMAMPIAVMAFAALLVGLFYHVAHN
                     PERGLTTEIAALAAPLLGMLLTRDALLAVAVAVIVTLLLLSKPWIRAWIPRLHREDLT
                     AAMQLLIVFAILLPLLPARTLDPWGALSPQKVGWMVALIAAVDFLGYALNRILGARRG
                     AVMMGVVGGMASSTVVTVAMSRQVKQDPSLRSVGLVAVTLACAMMGVRVAFLAGVVGG
                     PDLVRSLLLPMAAMVAVLLAGAWWTQRSGLAREGGEEMPMRNPFHLKRALTWGLALAG
                     VMLISAAARAGFGDRGLLVAATLSGFADVQPITLAVSSQVNTIGLPTRTAALAIVLAI
                     GSNTLAKAGFAWISGGRAFGGRLAIILAISLAAALAMVALRT"
     gene            complement(2197..2382)
                     /locus_tag="VFV26_05145"
     CDS             complement(2197..2382)
                     /locus_tag="VFV26_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845583.1"
                     /translation="MTKPLVPADLLKQLQAADIPTSGATAGRPKAAAHPKPVVKASTK
                     PQGKSGVTHTRMSNRGK"
BASE COUNT          313 a          850 c          916 g          432 t
ORIGIN      
        1 tcctggggtt cgggcagcgt tccccacaag gccgtggcct cggcctgatg cgcggcggtc
       61 cagggcagcc agcccgtggc gctgccggcc cgggcttcga agcggaagcg gtggcggatg
      121 aggcggccct ctttttcgcc gacggttgaa gccacctcgg tccggtcgtg gtcctcgtcc
      181 gccagccaat agacggcctc ggcgccggta cggcgggcct cggccagggc cgccagggcc
      241 ttggccaccg acagggcggg gctccagccg gcgccgatct gctgaccggt ggcgatgacg
      301 ggtgccgggc tcacggcctt ccccctccgc tcgattcaag cctcccgcgc cggcgcgtcg
      361 tacccatggg cccagcctac ccgatctgcc atgctcgacg gcatgcagag cgtggaaccc
      421 tggattccgc cggtctctcc ggacctggcc cgcctcgcca tggaggccgc ggacgaggcg
      481 ggtctggctt cgctgcgggc ctggccggag gtccgcaaag gcggcgtcgg gttcggcggg
      541 atgccgccct tcctgtgctg gcggggccag caggatgggg cctggcatct ggtgctgctc
      601 caggcgcggg aggccggggc cctggtgccc ggcgcccgga cggccccgct gccggagggt
      661 tggctcgagg cgctggatct ggaagccctg gcccggcccc tggcccgcca tccggatttc
      721 ccgggcgggg cgtcggtcca cgtggtccac ctgccgggcg ggggaacctt ccgggtgcgc
      781 tcccatggcc aggcggctcc cgatctggtg gccgcggtgc tgaaacacac cagccatatc
      841 cagatctggc aactggccga ttaagatcca cgggagcccg ccatgctgag cctcgatttc
      901 tccaccctga aggaagccgc catggccgtg gccctgggcc tgatgatggg cttggagcgg
      961 gagcgcagcg gcttcgagcg gagccaggag gcccacgaag gccagaaccg ccgggaatca
     1021 gatcgtctcg aggcgcagca tggcagcctg ggggcgcgca ccttcgcgct cctgacgctg
     1081 ctggggtgga tctccgtgaa ggtgggcggc gacggcatgg ccatgcccat cgcggtgatg
     1141 gcgttcgccg cgcttctggt gggcctcttc taccacgtcg cccacaaccc ggagcggggg
     1201 ctcaccacgg agatcgccgc cctcgccgcg cccctgctgg gcatgctgct cacccgggat
     1261 gccttgctgg cggtggctgt ggcggtgatc gtgaccctgc tcctgctgtc caagccctgg
     1321 atccgggcct ggattccccg gctgcaccgc gaagacctga ccgcggccat gcagctgctg
     1381 atcgtcttcg ccatcctgct gcccctgctg cccgccagga cgctggatcc ctggggcgcc
     1441 ctctcgccgc agaaggtggg ctggatggtg gccctcatcg cggcggtgga tttcctgggc
     1501 tatgccctca accgcatcct gggggcccgc cggggcgccg tgatgatggg ggtggtggga
     1561 ggcatggcga gctcgaccgt cgtcaccgtc gcgatgtccc gccaggtcaa gcaggatccg
     1621 tcgcttcgca gcgtcggcct cgtggcggtg accctggcct gcgcgatgat gggtgtgcgg
     1681 gtggcctttc tcgccggcgt ggtgggcggg ccggacctgg tccgctccct cctgctcccc
     1741 atggcggcca tggtggccgt cctgcttgcg ggcgcctggt ggacccagcg gtcaggactc
     1801 gcgcgggagg gcggcgagga gatgcccatg cgcaacccct tccacctcaa gcgcgccctc
     1861 acctgggggt tggccctggc gggggtgatg ctgatctccg cggcggcccg ggcaggattc
     1921 ggggaccggg gcctcctggt cgccgcgacc ctgtcggggt tcgcggacgt gcaacccatc
     1981 actttggcgg tgagcagcca ggtgaacacg atcggcctgc ccacgagaac agcggccctg
     2041 gccattgtgc tggccatcgg ctccaacacc ctggcgaagg ccggattcgc atggatttcg
     2101 ggaggccgtg ccttcggtgg acggctggcg atcatcctgg ccatctctct ggccgcggcg
     2161 ttggcgatgg tcgcgctgag gacctagccg aggggtctat ttcccgcggt tgctcatccg
     2221 ggtgtgggtg acgccactct tgccctgggg cttggtggat gccttgacca cgggcttggg
     2281 gtgggcggcg gccttcggtc ttccggcggt cgcgccggaa gtcggaatgt ccgccgcctg
     2341 aagctgcttc agaagatcgg cagggacgag aggcttggtc atgggagtgc tcctgactcc
     2401 atcctaccgc cctctgcgag gaggtcgaca atcggactcc agttcggatg tgacgaatcc
     2461 caaaggctta atgattaaac tgattggcat gcaggggcgc cggcaagacc c
//
LOCUS       DASUDT010000250         6471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2066635, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000250 DASUDT010000000
VERSION     DASUDT010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6471
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2066635"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1657)
                     /gene="lepA"
                     /locus_tag="VFV26_05150"
     CDS             complement(<1..1657)
                     /gene="lepA"
                     /locus_tag="VFV26_05150"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEX4845584.1"
                     /translation="MAHPSLIRNFSIVAHIDHGKSTLADRLLELTKTVAGRDMQAQIL
                     DDMDLERERGITIKAHAVTCLYRAQDGETYTLNLIDTPGHVDFTYEVSRSLAACEGAI
                     LVVDATQGVEAQTLANTYLALENGLEVFPVLNKTDLPSADPERVLEQIDTVIGLVDTA
                     HAVNVSAKTGQNCEQVLEQIVKCIPAPQGDPSAPLQALVFDCYYDAYRGVVNLIRVMN
                     GTLKAGDQIRFMSTGSEHRVDEIGIFDPKMDKQESLSVGEVGYLVANIRSLVDVKVGD
                     TVTHAVTLTTKPATEMLKGFKEIQPVVFAGIFPTSSDDFENLRNAMDKLRLNDSSFTY
                     EPETSTALGFGFRCGFLGLLHMEIVQERLEREFDLDLITTAPSVRFHVHLTDGSEMAV
                     DNPSKLPPLQKIAKIEEPIIEATILTRTDFVGGLIKLCEERRGIQQKLEYVSQDRVML
                     VYELPLNEVVMDFYDKLKSISKGYASFDYHMKHYIESDLVKMDILVNSDPVDALSILV
                     HRSKSQALGLALCQKMKEVIHQQMFDVAIQAAIGNQVIARQTVK"
     gene            1795..2607
                     /locus_tag="VFV26_05155"
     CDS             1795..2607
                     /locus_tag="VFV26_05155"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845585.1"
                     /translation="MSHFQSPMTILLVEDNALQRRQIEAQLQPLGHRILAAANGQEAL
                     IRVKGGNDVPDLVIMDAVMPSMDGFKACETIKSDPATAGIPVLVLTALSRDAKDRSYA
                     AGADDFLRKPANTLLLQVRVQTHLRVRDLSRHSAALAPARPKVLVVSASSLVRAQVQN
                     HFGKDQAVFLEAQGEGQARAQILAHRPDVLVLDTDLMEGSAQTLALAVHQSPELEDMP
                     ILLLHSPGELETWGRFQEPVADALEKPLVAPETRRRVALMARLAQLQKFAKA"
     gene            2604..4106
                     /locus_tag="VFV26_05160"
     CDS             2604..4106
                     /locus_tag="VFV26_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845586.1"
                     /translation="MTPRIRPVAAALSGLLLMLATSARAAVLEGRVTDGRRGLPGVRV
                     YPDRQPRVSPAGDPPLAITDAEGRFRLDLEPQDTVLAVEKDGWRRDLVPAAEWRGDIA
                     LKPEPRHRTESVFIVRLDFTDEPSKLPDGALRELVFSRRPGAASAANYLYEVSKGALS
                     LVEGRFLKLRSAEHPAPRTDEHKQAMATWVLERLRGEELGACDRLDNRTGARKPDGKP
                     DHLWIITPGAPQSLTADESHLKAVSLLLPLPWNRARRWPLLFMTEEVPLGNIVHEAFH
                     AMGEHRVDDLYLDCDDPLTAGIWDLMDAGQYRGWDRSHPEEGPWVEDTGYSPSHPTAW
                     VRSDLWYRGRFRSTVARHAVKGRAWEGWIAPVSRAPGADPQWVTLPDPRKKGRFFSLE
                     VRRPWGFERGRVGGRFGPGHEGLIVARIDPSLLSHGDPRGPMRVVDAHPGSPAPPHPP
                     VPCRMWELDDAAFNLGPGENPRGRSGPLSWEVLETDARGRMRVRVRLARR"
     gene            4129..4596
                     /locus_tag="VFV26_05165"
     CDS             4129..4596
                     /locus_tag="VFV26_05165"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX4845587.1"
                     /translation="MRLALILCATLTVAAQSPAESAPATVLDDWHRAAAQADEGRYFG
                     HFAEGAVFLGTDPGERWTKAAFQAWAHPFFLRGKAWSFKATRRAVTLSPDGRTAWFDE
                     DLDTPNLGPARGTGVLTQTQGQWRIEQYSLSIPIPNALTKAVQAQIEALAKKP"
     gene            4626..5996
                     /locus_tag="VFV26_05170"
     CDS             4626..5996
                     /locus_tag="VFV26_05170"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX4845588.1"
                     /translation="MNPSRCLLFCLTAATLAARTSPEALRPPSERLRAEAFRTHGAYE
                     DLAWLCDRIGHRLAGSPQLDQAIAWAQTRMKAAGLVNVHAEPVMVPHWVRGRESAELL
                     LPAPHRLNILGLGGSVGTPEGGLTADVVVVGSFDELDQLGSAVKGKIVLFDVPWKGYG
                     HTVVYRHAGAAKAARHGAVGALVRSVGPVSLDTPHTGVMEYDPAFPKIPTASVTIEAA
                     TQMRRMQARGERILMKLEMGAQTLPDAPSANVVGEIRGTEKPNEVIILSGHLDSWDVG
                     QGAQDDGAGSMIALEAARLIQALGLKPRRTIRVVLYTNEENGLRGGLGYRDAHRAEFK
                     DIIAAFESDSGSERIKAFSLDLRKATPEAKAAALASLKGLGGALEPFGPIELRLGGSG
                     ADVGPMVAEGVPGIGVGHAATHYFDIHHTHADTFDKVEKDDLAHNAAALASIAFALAQ
                     AEVRFQ"
     gene            complement(6211..>6471)
                     /locus_tag="VFV26_05175"
     CDS             complement(6211..>6471)
                     /locus_tag="VFV26_05175"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX4845589.1"
                     /translation="RYQGFTLVCEGHAAPAERGRGGTDALDLSSQRAQAAQRFLARLG
                     LPPSRITSEARGDSQPEGDGSTPEGRALQRRVTFRFQRVAER"
BASE COUNT          971 a         2314 c         2169 g         1017 t
ORIGIN      
        1 ccttcactgt ctggcgggcg atgacctggt tgccgatggc ggcctggatg gccacgtcga
       61 acatctgctg gtggatgact tccttcatct tctggcagag cgcgaggccg agggcctggc
      121 tcttgctgcg atgcaccagg atggacaggg catccacggg atcgctgttc accaggatgt
      181 ccatcttcac caggtcggat tcgatgtagt gcttcatgtg gtagtcgaag ctggcgtagc
      241 ccttggagat ggacttgagc ttgtcgtaga agtccatcac cacttcgttg aggggcagtt
      301 cgtagaccag catcacgcgg tcctggctca cgtactccag cttctgctgg atgccccggc
      361 gctcctcgca gagcttgatg aggccgccca cgaagtccgt ccgcgtgagg atggtggcct
      421 cgatgatggg ttcctcgatc ttggcgatct tctggagggg cggcagcttc gaggggttgt
      481 ccacggccat ctcgctgccg tccgtgaggt gcacgtggaa ccgcacgctg ggggcggtgg
      541 tgatgaggtc gagatcgaac tcgcgctcca gccgctcctg cacgatctcc atgtggagca
      601 ggcccaggaa gccgcagcgg aagccgaagc cgagcgccgt ggaggtctcc ggctcgtagg
      661 tgaagctgct gtcgttgagc cgcagcttgt ccatggcgtt gcgcaggttc tcgaagtcgt
      721 cgctggaggt ggggaagatg cccgcgaaca ccacgggctg gatctccttg aagcccttca
      781 gcatctccgt ggcgggcttg gtcgtgagcg tgactgcgtg cgtgacggtg tcacccacct
      841 tcacgtccac cagcgagcgg atgttggcca ccaggtagcc cacctcgccc acggagagcg
      901 actcctgctt gtccatcttg ggatcgaaga tgccgatctc gtccacgcgg tgctcgctgc
      961 cggtggacat gaagcggatc tggtcccccg ccttcagggt gccgttcatg acgcggatga
     1021 ggttcacgac gccgcggtag gcgtcgtagt agcagtcgaa gaccagggcc tggagcgggg
     1081 cgctggggtc accctggggc gcgggaatgc acttcacgat ctgttccagc acctgctcgc
     1141 agttctggcc ggtcttggcg ctcacgttca ccgcatgggc cgtatccacc aggccgatca
     1201 ccgtatcgat ctgctccagc acgcgctcgg gatccgcact gggcaggtcg gtcttgttga
     1261 gcaccgggaa gacctccagg ccgttctcca gggcaaggta ggtgttggcc agggtctggg
     1321 cctccacgcc ctgggtggcg tccaccacca ggatggcgcc ttcgcaggcg gcgaggctgc
     1381 ggctcacctc gtaggtgaag tccacgtggc ccggcgtgtc gatgaggttc agggtgtagg
     1441 tctcgccgtc ctgggccctg tagaggcagg tcacggcgtg ggccttgatg gtgatgcccc
     1501 gctcgcgctc caggtccatg tcgtccagga tctgggcctg catgtcccgg cccgccaccg
     1561 tcttggtcag ctcaagcagg cggtccgcca gggtggactt gccgtggtcg atgtgggcga
     1621 cgatggagaa attgcggatg agactgggat gagccactga ggaacctcga acccgccatt
     1681 gtaccgttgg tatctcttgc tgtctgcggg gttttaccaa tcccatcttc atccagcagt
     1741 tgattgcagc cgatagggct cctaccctcg gatgacgaga gccaaggagt ccgcttgtcc
     1801 cacttccagt cccccatgac catcctgttg gtggaggaca acgcgcttca gcgccgtcag
     1861 atcgaggcgc agctccagcc cctggggcac cggatcctgg ccgcggccaa cggccaggag
     1921 gccctgatcc gcgtgaaggg cggcaatgac gtgcctgacc tggtgatcat ggacgccgtc
     1981 atgccctcca tggacggatt caaggcctgc gagaccatca agtccgaccc ggccacggcg
     2041 ggcatccccg ttcttgtgct cacggccctg agccgggatg ccaaggaccg cagctacgcg
     2101 gcgggggccg acgacttcct ccgcaagccc gccaacaccc tgctgctcca ggtgcgcgtg
     2161 cagacccatc tccgcgtccg ggacctgtcc cgccattcag cggccctcgc cccggcccgg
     2221 cccaaggtgc tggtggtgtc cgccagctcc ctggtgcgcg cccaggtgca gaaccacttc
     2281 ggcaaggacc aggcggtctt cctcgaagcc cagggcgaag gccaggcccg cgcccagatc
     2341 ctcgcccacc ggcccgacgt gctggtgctg gatacggacc tgatggaagg cagcgcccag
     2401 accctggccc tggcggtcca ccagtccccc gagctggagg acatgcccat cctgctgctg
     2461 cacagccccg gcgagctgga gacctggggc cgcttccagg agcccgtggc cgatgccctg
     2521 gagaagcccc tggtggcgcc ggaaacccgc cgccgcgtgg ccctgatggc ccggctggcc
     2581 cagttgcaga aattcgccaa ggcatgacac cccgcatcag gccggttgca gcggcccttt
     2641 ccgggctcct gctgatgctg gccacctctg cccgggccgc tgtgctggaa ggccgtgtga
     2701 ccgacggccg ccgggggctg ccgggcgtgc gcgtctatcc ggaccgccag ccccgggtgt
     2761 cccccgccgg agatccgccc ctggccatca ccgatgcgga gggccgcttc cgcctggacc
     2821 tggagccgca ggacacggtg ctcgccgtcg aaaaggacgg ctggcgccgc gacctcgtgc
     2881 ccgcggccga atggcgcggg gacatcgccc tgaagcccga gccccggcat cgcaccgaat
     2941 ccgtcttcat cgtgcgcctc gacttcacgg acgagccctc gaagctgccg gatggcgccc
     3001 tccgcgaact ggtcttctcc cgccgccccg gtgccgccag cgccgccaac tacctgtacg
     3061 aagtgagcaa gggggccctg tccctggtgg agggccgctt cctgaagctg cgcagcgccg
     3121 aacaccccgc cccgcgcacg gatgagcaca agcaggccat ggccacctgg gtgctggagc
     3181 gcctgcgggg cgaagagctc ggcgcctgcg accgcctgga caaccgcacc ggcgcccgga
     3241 aacccgacgg caagcccgac cacctctgga tcatcacccc cggcgcgccc cagtccctca
     3301 ccgccgatga atcccacctc aaggccgtga gcctgctcct ccccctgccc tggaaccgcg
     3361 cccggcgctg gccactgctc ttcatgacgg aggaggtgcc cctggggaac atcgtccacg
     3421 aggccttcca cgccatgggc gagcaccgcg tggacgacct ctacctggac tgcgacgatc
     3481 cgctcaccgc cggcatctgg gatctcatgg acgcgggcca gtaccgcggc tgggaccggt
     3541 cccatcccga ggagggcccc tgggtggagg acacgggcta cagcccctcc catcccaccg
     3601 cctgggtgcg gtcggacttg tggtaccggg ggcggttccg gtccaccgtg gcccgccatg
     3661 cggtgaaggg ccgcgcctgg gagggctgga tcgccccggt gtcccgggcc ccgggcgccg
     3721 atccccagtg ggtgaccctg cccgatccgc gtaaaaaggg ccggttcttc agcctcgagg
     3781 tgcgccgccc ctggggcttc gagcggggcc gcgttggcgg ccgcttcggc cccggccatg
     3841 aagggctcat cgtggcgcgc atcgacccca gcctcctgag ccatggcgac cccaggggcc
     3901 ccatgcgcgt ggtggacgcc catcccggca gccccgcgcc cccccacccc cccgtcccct
     3961 gccggatgtg ggaactggac gacgccgcct tcaacctcgg ccccggcgag aaccccaggg
     4021 gccgcagcgg ccccctgtcc tgggaagtcc tggagaccga cgcccgcggg cgcatgcggg
     4081 tgcgggtccg cctggctcgc cgctgaccac ctcttttccg gagccccaat gcgcctcgcc
     4141 ctgatcctct gcgccaccct caccgtcgcc gcccagtccc ccgctgaaag cgcccccgcc
     4201 accgtgctgg acgactggca ccgggcggcg gcccaggcgg acgaggggcg ctacttcggg
     4261 catttcgccg aaggcgccgt gttcctgggc acggatcccg gcgaacgctg gacgaaggcc
     4321 gccttccagg cctgggccca tcccttcttc ttgcggggca aggcctggtc tttcaaggcc
     4381 acccggcggg ccgtcaccct ctcgccggac ggccgcaccg cctggttcga cgaggacctc
     4441 gacacgccga acctgggccc ggcccggggc accggcgtgc tcacgcagac gcagggccag
     4501 tggcggatcg agcagtacag cctgagcatc cccatcccca atgccctgac caaggcggta
     4561 caggctcaga tcgaggccct ggcaaaaaag ccctgaagcg gcggaatcac caagtaagat
     4621 gaggcatgaa tccgagccgc tgcctcctct tctgcctcac ggccgccacc ctggccgccc
     4681 ggacctcgcc ggaggccctc cggcccccct ccgagcgcct gagggccgag gccttccgca
     4741 cccacggcgc ctacgaggac ctggcttggc tctgcgaccg catcgggcac cgcctggccg
     4801 gatcgcccca gctggaccag gccatcgcct gggcccagac gcgcatgaag gccgcgggcc
     4861 tggtgaacgt ccacgccgaa ccggtgatgg tgccccactg ggtgcggggc cgggaatccg
     4921 ccgagctgct gctgccggcg ccccatcgcc tgaacatcct ggggctcggc ggcagcgtgg
     4981 gcacgcccga gggcggtctc acggcggacg tggtggtggt gggctccttc gacgaactgg
     5041 atcagctggg cagcgcggtg aaggggaaga tcgtcctttt cgacgtgccc tggaagggct
     5101 acggccacac cgtggtctac cgccacgccg gcgccgccaa ggccgcccgg catggcgccg
     5161 tgggcgccct ggtgcgctcc gtgggccccg tgagcctgga cacgccgcat accggcgtca
     5221 tggagtacga cccggccttc ccgaagatcc ccaccgcttc cgtgaccatc gaggccgcca
     5281 cccagatgcg ccgcatgcag gcccggggcg agcgcatcct catgaaactc gagatgggcg
     5341 ctcagaccct gccggacgcc ccttccgcca acgtggtggg cgagatccgc ggcacggaga
     5401 agcccaatga ggtcatcatc ctcagcggcc acctggacag ctgggacgtg ggccagggcg
     5461 cccaggacga tggcgccgga agcatgatcg ccctggaggc cgcccgcctc atccaggccc
     5521 tgggcctgaa gccccgccgc accatccgcg tggtgctcta caccaacgag gagaacggcc
     5581 tgcgcggcgg cctgggctac cgcgacgccc accgcgccga gttcaaggac atcatcgccg
     5641 ccttcgaatc cgattccggc agcgagcgca tcaaggcctt cagcctcgat ctgcgcaagg
     5701 ccacgccgga ggccaaggcc gccgctttgg cctcgctgaa agggctggga ggcgccctcg
     5761 agcccttcgg ccccatcgag ctccgcctcg ggggttcggg cgcggacgtg gggcccatgg
     5821 tggccgaggg cgtgccgggc atcggcgtgg gccatgccgc cacccactac ttcgacatcc
     5881 accacaccca cgccgacacc ttcgacaagg tggagaagga cgacctggcc cacaacgccg
     5941 ccgccctggc gtccatcgcc ttcgcgctgg cgcaggcgga ggtgcgattt cagtaggctg
     6001 gagtctggag tctggagtct ggagtctggg gtctggggtc tggggtctgg aggtaccgat
     6061 ccctgtggcg gcctctggcc gcgtcagagt tcacctttgg gctcggttgc ccgaatgggt
     6121 cggtacccaa ctgaaataca ggcgcggcgc aaagcgccgc accagaaagc agtacctcca
     6181 ggctccagtc tccggactcc agcctgtccc ctaccgctcc gccacccgct ggaaccggaa
     6241 ggtcacgcgg cgctggaggg cgcggccttc gggggtgctg ccatcgcctt cgggctggct
     6301 gtcgccccgg gcctcggagg tgatccggga aggcggcagg ccgagccggg ccaggaagcg
     6361 ctgggccgcc tgggcacgct gggagctgag atccagggcg tccgtgccgc cccggccccg
     6421 ctcggcggga gcggcgtggc cctcgcacac cagcgtgaag ccctggtagc g
//
LOCUS       DASUDT010000251         2562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1845855, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000251 DASUDT010000000
VERSION     DASUDT010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845855"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VFV26_05180"
     CDS             <1..403
                     /locus_tag="VFV26_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845590.1"
                     /translation="EATSGRGVKLALQVEGGAEAAVVELLRQARAEAVGFCWHPGTAD
                     AEALADRLWCGVCEPGLDLRLLQKLGYRWDMALPAEDPATFRAQAAALEAAHPPVLFP
                     AEMPATALGRPVVPDDSVVFGRHLEREGGHA"
     gene            400..1527
                     /gene="lpxB"
                     /locus_tag="VFV26_05185"
     CDS             400..1527
                     /gene="lpxB"
                     /locus_tag="VFV26_05185"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX4845591.1"
                     /translation="MTQTLLVLAGEDSGDLHGAELLRELKARRPDLRIIGVGGPRMSP
                     YLDRKLADVKDLAVVGFVEVIKHLPRLNRLFKQILAAAQEEGITAALLIDYPGFNLRL
                     ARALRKRMPAVTLHQYVCPQVWAWKKGRIPSLGTGLDTLYCLFDFEPELFRGYPVDAR
                     FVGHPLVEVVKPECDRATFFAETGLDPARPLVALLPGSRKGEIERLLPPMAELARRWR
                     TSRPEVQWVLPVAPTLDPAFVQAHLGDAPVTLVEGRTYAARAHADAALVASGTATLET
                     ALLGTPFAIVYKLNALTYQLARRIVKVPHFGLANVVARREVAPELLQGEVNADRLGVE
                     LTRLLEPATARRIRAELGEVRGHLGEPGAAGRVAEDLLQKI"
     gene            1574..2089
                     /locus_tag="VFV26_05190"
     CDS             1574..2089
                     /locus_tag="VFV26_05190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845592.1"
                     /translation="MLPWLLSVPVLLLQAPAPLPVVEAKDLARAPRGPMVPQIPDAGA
                     ETSLTGQARAGARRGPSVPALQLPPGSVRVVDRVPDVSGWRAFAVEVPAGGKVRVHVV
                     EGRKAWFRVLGVNAWGQEEPGLLQNRIPTGEPQATYENRTAEPRTIYFIVDTLDANMV
                     GDPYTLEITRG"
     gene            complement(2226..>2562)
                     /locus_tag="VFV26_05195"
     CDS             complement(2226..>2562)
                     /locus_tag="VFV26_05195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845593.1"
                     /translation="HMDLPEALHRGATLRAAAPEGAWTLRLVVSGRAEGLKQVARAAG
                     SRAPEVLVLPYVRPDGFRWWQACYGTYASRAAALKAWKQAPASLQKTFSDALPLRLQR
                     LPGDPPKAL"
BASE COUNT          363 a          893 c          914 g          392 t
ORIGIN      
        1 ggaggccacc agtggccggg gcgtgaagct ggcgctgcag gtcgagggcg gggccgaggc
       61 cgccgtggtg gagctgttgc ggcaggcccg ggccgaggcc gtgggcttct gctggcaccc
      121 gggcaccgcc gatgcggaag ccctggcgga ccgcctctgg tgcggcgtct gcgagcccgg
      181 cttggacctg cgccttctcc agaaactggg ctaccgctgg gacatggcgc tgcccgccga
      241 ggaccccgcc accttccgcg cccaggcggc cgcgctggag gccgcccatc cgccagtgct
      301 cttccccgcg gagatgcccg ccaccgccct gggccgcccg gtggtgcccg acgacagcgt
      361 ggtgttcggc cggcacctgg agcgtgaggg gggccacgcg tgacccagac tctgctcgtc
      421 ctcgcaggcg aggactccgg cgacctgcac ggcgcggagc tgctgcgcga gctgaaggcc
      481 cgccgtccgg acctgcggat catcggtgtg ggcgggccgc gcatgagccc gtacctggac
      541 cgcaagctgg cggacgtgaa ggacctggcc gtggtgggct tcgtcgaggt catcaagcac
      601 ttgccgcgcc tgaaccgcct cttcaagcag atcctggccg ccgcccagga agaaggcatc
      661 accgccgccc tgctcatcga ctacccgggc ttcaacctgc ggttggccag ggccctgcgg
      721 aagcggatgc ccgccgtgac cctgcaccag tacgtgtgcc cccaggtgtg ggcctggaag
      781 aagggccgca tccccagtct gggcacgggt ctggacacgc tctactgcct gttcgatttc
      841 gagcctgagc tgttccgcgg ctaccccgtg gacgcccgct tcgtgggcca tcccctggtg
      901 gaggtcgtga agcccgagtg cgaccgggcc accttctttg cggagaccgg cctcgatccc
      961 gcccggcccc tggtggccct gctgccgggc agccgcaagg gcgagatcga acgcctgctg
     1021 ccgcccatgg cggagctggc ccgccgttgg cgcacatccc ggcccgaggt gcagtgggtg
     1081 ctgcccgtgg cgcccacgct ggatcccgcc ttcgtgcaag cccacttggg tgatgcgccg
     1141 gtgacgctgg tggaagggcg cacctacgcg gcccgcgccc atgcggacgc ggccctggtg
     1201 gcctcgggca ccgccaccct ggagacggcc ctgctgggca cccccttcgc catcgtctac
     1261 aagctgaacg ccctcaccta ccagctggcc cggcgcatcg taaaggtccc ccacttcggc
     1321 ctcgcgaacg ttgtggcccg ccgcgaagtg gcccccgagc tgctgcaggg tgaggtcaat
     1381 gccgatcggc taggcgtgga gctgacgcgg ctgctggaac ccgccacggc ccggcgcatc
     1441 cgcgccgagc tgggggaggt gcgcgggcac ctgggcgaac ccggcgctgc ggggcgcgtg
     1501 gccgaggatc tgttgcagaa gatttgaagc aacccatctt ggggttccgg catctcaagg
     1561 catggaggat cccatgctcc cctggctgct ctccgttccc gtccttctgc tccaggctcc
     1621 ggcgccgctt cccgtggtgg aggccaagga ccttgctcgg gccccaaggg ggcccatggt
     1681 gccccagatt cccgatgcgg gggccgagac gagcctcacg ggccaggccc gggccggggc
     1741 ccgtcgaggt ccttctgttc cggctctgca gctgccgccg ggcagtgtcc gggtggtgga
     1801 cagggtcccg gatgtcagcg gatggcgggc cttcgccgtc gaggtgcccg cgggcggcaa
     1861 ggtgagggtc cacgtggtgg aaggccgcaa ggcctggttc cgggtgctgg gtgtcaatgc
     1921 ctggggccag gaggagccgg ggttgctcca gaaccgcatc cccaccggcg aaccccaggc
     1981 cacctacgag aaccgcaccg cagagccccg caccatctac ttcatcgtgg acaccctcga
     2041 cgccaacatg gtcggggatc cctacaccct ggagatcacc cgcggctgag cctgcggagc
     2101 gcagcgttca agggctgaaa acaagggctt tcaccaccaa gacaccaaga aaagcgaaag
     2161 acaatgcttt tgcctttctt ggtgccttgg tggtgagctt ttttcttttg aaggccaacc
     2221 tagccctaca aagccttcgg cggatctccg ggcaggcgct ggagcctgag gggcagggcg
     2281 tcgctgaagg tcttctgaag ggaggccggg gcctgcttcc atgccttcag ggcagcggcg
     2341 cgggaggcgt aggtgccata gcaggcctgc caccagcgga agccgtccgg ccggacatag
     2401 ggcagcacca gcacctcggg cgccctggaa cccgcggccc gggccacctg tttgagccct
     2461 tcggcgcggc cggacaccac caggcgcagg gtccaggcgc cttcgggggc ggcggcccgc
     2521 agggtggcgc cgcggtggag ggcttcggga aggtccatgt gt
//
LOCUS       DASUDT010000252         3639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1315596, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000252 DASUDT010000000
VERSION     DASUDT010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3639
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315596"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2299)
                     /locus_tag="VFV26_05200"
     CDS             complement(<1..2299)
                     /locus_tag="VFV26_05200"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX4845594.1"
                     /translation="MTSDAPHFGSYRLLTRLGEGAMGEVWRALDLRLEREVALKILKD
                     ADDLRRKALIGEAKLACQLNHPNIAHIYDAGEVDGTPYIAMELVEGRTLRALVGRPVD
                     GPLLHRLAQQAAQALSHAHQKGIVHRDIKPENLLLTNEGQLKILDFGIARRGADDLPP
                     GATSHHMTLVERTAPGYSQGTPAYMSPEQANGQPLTGQSDQFSLGVVLYELATATHPF
                     LKGSLVDTLYAVTRDEPKPLSEARPDLPRTLQDAIHRLMAKAPRDRFPSLQTLAAGLS
                     EDIPTATAPHLSLSVAQLERSRRRWILASAVGAVLVAGTALGAFLVRRGQISGLGEAR
                     RASREDFTKGRRVVAILPLEQLQPDPEHAWLSNSFADAMAYGLVRREDLLVVDRLRVV
                     EAMNHLGDTPGRAPKALGELGRQLKAELLVLGSYQVVGGQLRMGVRVVDVARGATRHQ
                     FQLDRPVADLLKLEDELQQRLPQEMGLGSDPGSLRSQAKNPRTRELYTKALQVITDGN
                     QDSVRLANSLLQSAIEIEPDYAPARAEYAWTLAELGATRALSQGRFDEAQSLLRQGKA
                     AAETAIALDPSASQAYRALGSILMRLGDLEGASRSALQAVRLDPADHKAYDMLADVFA
                     GLEGEDNHQAARRYFEKSLSLFPEGWQAHHRYGVLLQNQGELPEALQHADRAIALRPT
                     AEYAYVTAADCLLWMGRTAEAEVRLKAGLREVPGSNVLRSLMAYAAWDQGDRDTSLGY
                     LRELDGAWPPDHSSTLLLAGVRKAVE"
     gene            2412..>3639
                     /locus_tag="VFV26_05205"
     CDS             2412..>3639
                     /locus_tag="VFV26_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX4845595.1"
                     /translation="MAVPDLETALTGARLVEEAGALLTLGEEPDRMVAHAFERLGQLV
                     PYDLATILLREGDGLRVAHAVGPLATPQLSEALIPVRGNLRLQQALKARSKPATFEED
                     DPGEDTFHGLLDMPHGHSCLVAPLRSRGETFGLMTLDAMVCRQYPESVLHHVGVFASL
                     LALGLKQAEHLGRLAERERSLAEEVGYFREVQRRDVLQEPLRAESPAMRGLLDQLGQV
                     AATAATVLITGETGTGKEKVAQTLHHLSPRREKPFIKVNCSALPATLIESELFGHVKG
                     AFSGAASARKGRFELADGGTLFLDEIGDLPLDLQPKLLRAIQEKEIDPLGSEKSRKVD
                     VRLVAATHTDLRKAVAEGRFREDLFYRLSVFPIQLPPLRERPGDIAALAEGFLDRFAR
                     ENRRPPIHLPESVRDQL"
BASE COUNT          511 a         1324 c         1268 g          536 t
ORIGIN      
        1 cttccacggc cttcctcaca cccgccagca gcagggtgct ggaatgatcc ggaggccagg
       61 ccccgtccag ctcgcggagg tatcccaggg aagtgtcccg gtccccctgg tcccaggcgg
      121 cataggccat gaggctgcgc aggacgttgg agccggggac ctcacggagg cccgccttca
      181 gcctgacctc ggcttccgcc gtgcggccca tccaaagcag gcagtccgcg gcggtgacgt
      241 aggcgtactc agccgtgggg cgcagggcga tggcccggtc cgcatgctgg agggcctcag
      301 gcagttcgcc ctggttctgc agcagcaccc cgtagcggtg gtgggcctgc cagccttcgg
      361 ggaacaggct caaggacttc tcgaagtagc gccgggccgc ctggtggttg tcctcgccct
      421 ccagcccggc gaacacatcc gccagcatgt cgtaggcctt gtggtccgcc ggatccaggc
      481 gcacggcctg cagcgcggaa cggctggcgc cctccagatc gcccagccgc atcaggatgg
      541 agccgagggc ccggtaggcc tgggaggcgc tggggtccag ggcgatggcg gtttccgcgg
      601 cggccttgcc ctgccgcagc agggactggg cctcgtcgaa gcgtccctgg ctcagggccc
      661 gggtggcgcc cagctcagcc agggtccagg cgtactccgc ccgggccggg gcgtagtccg
      721 gttcaatctc gatggcggac tgcagcagcg aattcgccag ccggaccgag tcctgattgc
      781 cgtccgtgat gacctggagg gccttggtat agagctcccg cgtgcgcggg ttcttggcct
      841 gggagcggag tgagccagga tcgctgccca gccccatctc ctgggggagc cgctgctgca
      901 gctcgtcctc cagcttcagg aggtccgcca cggggcggtc cagctggaac tggtggcggg
      961 tggccccccg ggccacgtcc accacgcgga cgcccatgcg cagctggccg cccaccacct
     1021 ggtagctgcc cagcaccagc agctcggcct tgagctggcg ccccagctcg cccagggcct
     1081 tcggggcccg gcccggggta tcgcccagat ggttcatggc ctccaccacc cgcagccggt
     1141 ccaccacgag aagatcctcg cggcgcacca gcccgtaggc catggcatcg gcgaagctgt
     1201 tgctcagcca ggcgtgctcc ggatccggct ggagctgctc caggggcagg atggccacca
     1261 cccggcgccc cttggtgaag tcctcccggg aggcgcgccg cgcctcgccc aggcccgata
     1321 tctggccgcg gcggaccagg aaggcgccca gcgccgtccc cgccaccagc accgccccca
     1381 ccgccgaggc caggatccac cggcgccggg accgctcgag ctgcgccacc gacaggctga
     1441 gatggggcgc cgtggccgtg gggatgtcct cggacagccc cgccgccagg gtctggaggc
     1501 tggggaaccg gtccctgggc gccttcgcca tcaggcgatg gatggcgtcc tggagggtgc
     1561 gcggaaggtc gggccgcgcc tcggacaggg gcttcggctc gtcccgcgtc accgcgtaga
     1621 gcgtgtccac caggctgccc ttcaggaagg ggtgggtggc cgtggccagc tcgtagagca
     1681 ccaccccgag gctgaactgg tccgactggc ccgtgagcgg ctggccgttg gcctgctccg
     1741 ggctcatgta ggcgggcgtc ccctggctgt agcccggcgc cgtgcgctcc acgagggtca
     1801 tgtggtggga ggtggccccg gggggcaggt cgtcggcgcc gcggcgggcg atgccgaaat
     1861 ccaggatctt gagctgcccc tcgttcgtga gcagcaggtt ctcgggcttg atgtcgcggt
     1921 ggacgatgcc cttctggtgc gcgtgggaca gggcctgggc cgcctgctgg gccagtcggt
     1981 gcagcagcgg accatcgacc gggcggccca ccagggcgcg gagggtgcgg ccctccacca
     2041 gctccatggc gatgtagggc gtgccgtcca cttcgcccgc gtcgtagatg tgggcgatgt
     2101 tcgggtggtt cagctggcag gccagcttcg cctcgccgat gagggccttg cgccgcaggt
     2161 cgtcggcgtc cttcaggatc ttgagggcca cctcccgctc gaggcgcagg tccagcgccc
     2221 tccagacttc gcccatggcc ccttccccca ggcgggtgag cagccggtag gaaccgaaat
     2281 gaggggcgtc ggaggtcaag cgtgtcctta aggaatccag gaaagtatac ctttcgcctt
     2341 acttgcccgt ttaggtatcg gatggcttga cccgattctc gaaatgccga gaatcaggcc
     2401 agaggtgccc cgtggccgtg ccggatctcg aaaccgccct caccggcgcc cgcctggtgg
     2461 aggaagccgg cgccctgctc accctgggcg aggagccgga ccgcatggtg gcccacgcct
     2521 tcgagcgcct gggccagctg gtgccctacg acctggccac gatcctgctc cgcgaggggg
     2581 atggcctgcg ggtggcccac gccgtggggc ccctcgccac cccccagctt tcagaggccc
     2641 tcattcccgt ccgggggaac ctgcgcctcc agcaggccct caaggcccgc tccaagccgg
     2701 ccaccttcga ggaggatgat cccggcgagg acaccttcca cggcctcctc gacatgcccc
     2761 acggccacag ctgcctggtg gccccgctcc gcagccgcgg cgagaccttc ggcctcatga
     2821 ccctggacgc catggtgtgc cgccagtacc ccgagagtgt gctgcaccat gtgggcgtct
     2881 tcgcctcgct gctggccctg ggcctcaagc aggcggaaca cctggggcgg ctggcggagc
     2941 gggagcgcag cctggcggag gaggtcggct acttccgcga agtccagcgc cgggacgtgc
     3001 tccaggagcc cctgcgggcc gagagtcccg ccatgcgggg cctcctcgac cagctgggcc
     3061 aggtggccgc caccgccgcc acggtgctca tcaccgggga gaccggaacc ggcaaggaga
     3121 aggtggccca gaccctccac cacctctcgc cccgccgcga gaaacccttc atcaaggtca
     3181 actgcagcgc cctgcccgcc acgctcatcg aatccgagct cttcggccac gtgaagggcg
     3241 ccttcagcgg cgcggcctcg gcccgcaagg gacggttcga gctggcggac gggggcaccc
     3301 tgttcctgga cgagatcggc gacctccccc tggacctgca acccaagctc ctccgcgcca
     3361 tccaggagaa ggagatcgac cccctgggct cggagaagtc ccgcaaggtg gatgtgcgcc
     3421 tggtggccgc cacccacacg gacctgcgca aggccgtggc cgagggccgg ttccgcgagg
     3481 acctcttcta ccggctcagc gtcttcccca tccagctccc gcccctgcgc gagcggcccg
     3541 gcgacatcgc cgccctggcc gaggggttcc tcgaccgctt cgcccgggag aaccgccggc
     3601 cccccatcca cctgcccgaa tccgtgcgcg accagctgg
//
LOCUS       DASUDT010000253         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1514726, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000253 DASUDT010000000
VERSION     DASUDT010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514726"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VFV26_05210"
     CDS             <1..272
                     /locus_tag="VFV26_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845596.1"
                     /translation="PSEVLQLWAACEGARCGFLWEAGEALDLTAEELADLPEALWFHP
                     PLRAVKANPGLWAPYAERLALWGLKTPAEVRDLPFTPAVLIVDGF"
     gene            262..744
                     /locus_tag="VFV26_05215"
     CDS             262..744
                     /locus_tag="VFV26_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845597.1"
                     /translation="MASDTSFSVVDSGGGLAPLWRSLADLWFFGWIGRLWFSTLADTE
                     SERSQIRQAMEDHEALKTTRPYALVLQAILDDPDFRLVDRDPALGEQVLIHAACFDDT
                     WIQLRGSALDQARYLRLYCTSRFKPFRQAYTFDLPNHAITRHRLPGGHWHREVPYALG
                     "
     gene            complement(729..2012)
                     /locus_tag="VFV26_05220"
     CDS             complement(729..2012)
                     /locus_tag="VFV26_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845598.1"
                     /translation="MTPARLLRRLVLLDEGEAPALLWSALYFFLLLFGFYLLRPVREA
                     MGIARGADKLPWLMTGTLLAMALANPAFAALVSRLPRRRFIPRTYRFFALNMLAFFLA
                     FRLLPNHGGAALGYAFYIWLSVFNLFVVSVFWGLMSDVWTEVQGKRLFGFIAMGGTLG
                     AIAGAAVTGVLTRGIALGGLVLKVEPLSLLLLSMLTLELAVQCVKRLAAIFHLGDVAH
                     GEREPGPGLLEGLRLIATSRYLQLICAYMLLFTITSTFLYLEQGRIVAGAFRDTASRT
                     AAFAQLDLWVNVLTLATQVFLTGRLITGLGISAVLAILPVLSLAGFGALWLWPTFGVM
                     ALFQVLRRGLHYAVDRPAREILYIPLGPEERYKSKPFIDTFIYRGGDLLGVWAPAAFA
                     ALAIPLGAAAVACSGLWLGISRALGRRAGSRQPRA"
     gene            2106..>2356
                     /locus_tag="VFV26_05225"
     CDS             2106..>2356
                     /locus_tag="VFV26_05225"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEX4845599.1"
                     /translation="MTVSRREFIQWSAAATALAATGLDLAAAPGGKASPKKILILGGT
                     GFLGPATIEIAQARGHQVTMFNRGKTRPGLFPGVEKLHG"
BASE COUNT          407 a          838 c          806 g          305 t
ORIGIN      
        1 agcccagcga ggtgctccag ctctgggctg cctgcgaggg ggcccgctgc gggttcctgt
       61 gggaggcggg cgaggccctg gacctcaccg ccgaggaact ggccgacctg ccggaggcgc
      121 tctggttcca cccgcccctc agggccgtga aggccaaccc cgggctgtgg gcgccctatg
      181 cggaacgcct cgccctctgg ggcctgaaga cccccgccga agtcagggac ctgcccttca
      241 cccccgccgt gctcatcgtc gatggcttct gacacctcct tcagcgtggt ggattcgggt
      301 ggcggcctgg cgccgctctg gcgcagcctg gctgaccttt ggttcttcgg ctggattggc
      361 cgcctctggt tctccaccct ggcggacacg gaatcagaac gtagccagat tcgccaggcg
      421 atggaggatc acgaagccct gaagaccacc cgcccctacg cgctggtact ccaggccatc
      481 ctggacgatc ccgacttccg cctggtggac cgcgatcccg ccctggggga acaggtgctg
      541 atccacgccg cctgcttcga cgacacctgg atccagcttc gcggttcagc cctcgaccag
      601 gcccgctacc tgcggctcta ctgcaccagc cggttcaagc ccttccgcca ggcctacacc
      661 ttcgatctcc cgaaccacgc gatcacccgg caccgcctcc ccggcggcca ctggcaccgc
      721 gaggtgccct acgccctggg ctgacgggat ccggcgcggc gccccagggc ccggctgatc
      781 cccagccaca gccccgaaca ggccaccgcc gccgccccca gggggatggc cagggcggcg
      841 aaggccgccg gggcccacac acccagcagg tcgccgccgc ggtagatgaa ggtgtcgatg
      901 aagggcttcg acttgtagcg ctcctcggga cccaggggga tgtagaggat ctcccgggcg
      961 gggcggtcca cggcgtagtg cagcccccgg cgcagcacct ggaagagcgc catcacgccg
     1021 aaggtgggcc agagccacag ggcgccgaag cccgccaggc tcagcaccgg caggatggcc
     1081 agcacggcgg agatgcccag ccccgtgatg aggcggcccg tgaggaacac ctgggtggcc
     1141 agggtgagca cgttgaccca gaggtccagc tgcgcgaagg ccgcggtgcg gctcgccgta
     1201 tcccggaagg cccccgccac gatgcggccc tgctccaggt agaggaaggt gctggtgatg
     1261 gtgaacagga gcatgtaggc gcagatgagc tggaggtacc gcgaggtggc gatgagccga
     1321 aggccttcga gcagccccgg gcccggttcc cgctccccgt gggccacgtc gcccaggtgg
     1381 aagatcgccg ccaggcgctt cacgcactgc accgccagtt ccagcgtcag catggagagc
     1441 agcagcaggg acaggggttc caccttcagg acgaggccgc ccagcgcgat ccccctggtg
     1501 aggacccccg tcacggccgc cccggcgatg gcccccaggg tgccgcccat ggcgatgaac
     1561 ccgaagagcc gcttgccctg gacctcggtc cacacatccg acatgaggcc ccagaacacg
     1621 gacaccacga agaggttgaa gacgctgagc cagatgtaga aggcgtagcc cagggccgcg
     1681 ccgccgtggt tcggcagcag gcggaaggcc aggaagaagg ccagcatgtt cagggcgaaa
     1741 aagcggtagg tgcgggggat gaagcgccgc cgtggcaggc gcgacaccag ggccgcgaag
     1801 gccggattgg ccagggccat ggccagcagg gtccccgtca tgagccaggg cagcttgtcc
     1861 gccccccggg cgatgcccat ggcctcccgc acgggccgga gcaggtagaa cccgaagagc
     1921 aggagaaaga aatacaacgc ggaccagagc agggccggcg cctcgccctc gtccagcagc
     1981 acgagtcggc ggaggaggcg ggcgggggtc atggcggatc cggaaaaggc tgttgcgggg
     2041 gagactgaat ggagtatata tcgattcacg atgtatccaa cccactctca ccgccggagg
     2101 tccccatgac cgtttcccgc cgcgaattca tccagtggtc cgccgcggcc accgccctgg
     2161 ccgccacggg gttggacctg gccgccgcgc ccggcggcaa ggcctccccg aagaagatcc
     2221 tcatcctggg cggcaccggc ttcctggggc ccgccaccat cgagatcgcc caggcccgcg
     2281 gccaccaggt gaccatgttc aaccgcggca agacgcggcc cggcctcttc cccggcgtgg
     2341 aaaagctgca cggcga
//
LOCUS       DASUDT010000254         5336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1691643, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000254 DASUDT010000000
VERSION     DASUDT010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5336
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691643"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VFV26_05230"
     CDS             complement(<1..615)
                     /locus_tag="VFV26_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX4845600.1"
                     /translation="MGLMDWGKAQFLDILEWLDDSNDTLAWRFPMRGQEIQNGGKLVV
                     RESQEAVFVNEGQLADVFKPGTHNLTTQNLPILATLKGWKYGFESPFKSDVYFISTKL
                     YNDLKWGTSNPIMMRDADFGMLRIRAFGIYSIKVVDSGTFLKQLVGTNGVYTVPDISE
                     QLRKTIMSRFTDTLGEAKIPALDLAAKYDEISDLVKQKLQDEFKT"
     gene            complement(733..1089)
                     /locus_tag="VFV26_05235"
     CDS             complement(733..1089)
                     /locus_tag="VFV26_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845601.1"
                     /translation="MRIRPLALGAALALVPALVLSAATAKSRKSATGLVKSAAEAKAI
                     AERETGGKAFSARRIPLNGASGGWEVDVRMPHDEKGWRCIIDSDTRMVHSKTRIDQPG
                     GKSQAEGPLRTVRGTR"
     gene            complement(1149..2351)
                     /locus_tag="VFV26_05240"
     CDS             complement(1149..2351)
                     /locus_tag="VFV26_05240"
                     /inference="COORDINATES: protein motif:HMM:NF017495.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HEX4845602.1"
                     /translation="MTLIKPDDTWALWAFLFAWAAVSIHLEQRYRWASAVSGCILALG
                     GGLLFANVGLVPTASPVYDSVWTYVVPMAVPLLLFTADIRKIWRESGRAFGAFHISAL
                     GTVLGTILATALLGSRIPEIGGISAMFSGSYIGGSVNYVAMSEAFRVSPGLINAGLVA
                     DNLLMAVFFGLLTALPGVAFIRRRFHTPLLDELEAKPGGNGNNHAASYWGRSEISLKD
                     LSAALACAVLIVAISVKAAGAIGASGLPPFVKGLIGQKYLLITALTVALASAFPRFFS
                     EIRGARELGTLLIYLFFVVIGVPASITSVVRESPILLAYAAIILAVNLLVTLVVGRLT
                     RQDLEVLLIASNANVGGPTTAAAMAIGKGWNALVLPALLTGVWGYVIANYIGYYIGTY
                     VRAIFGGG"
     gene            complement(2389..3444)
                     /locus_tag="VFV26_05245"
     CDS             complement(2389..3444)
                     /locus_tag="VFV26_05245"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:NF020134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX4845603.1"
                     /translation="MRSVITGTGVGLPPHVVTNEALSRLMDTSDEWIRVRSGIQERRY
                     AEPGQGSTDLGVIAARNAIADAGLSPADIDAVVFATMTPDHVLPGNGPLLQAALGLGD
                     VPTFDIRQQCSGFLYGLELADLFIQSGRYRRVLLVGAEVHTPFMPWHLGWDTLIGQST
                     RDITDAERAENTLSRDRTVLFGDGAGAVVIEPREGGAGLGTIRLHTDGTGAGVLTMLG
                     ASFKRRPFVTHEQIESSETLPVMSGKEVFKAAVTLMPQAVREVCETSGLAVEDLDLVL
                     VHQANLRIIEGVQKALGLPPEKVPHNIERYGNTTAATLPILFHECRAQGLIRPGMNLV
                     FTALGSGLHWGAALYRA"
     gene            complement(3487..4407)
                     /locus_tag="VFV26_05250"
     CDS             complement(3487..4407)
                     /locus_tag="VFV26_05250"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX4845604.1"
                     /translation="MPSPTAVVCAYSSVGTSALEGLLEAGVEVKALYTYAQGADERWF
                     TPPAAIAEAQGIPIHMAPSFNEDTVFEAIRAHRPDFLFSFYFREMIQARFLELPRLGA
                     YNLHGSLLPKYRGRAPINWVLVKGETDTGVTLHAMTPKPDDGHIVAQARLSIDWDETA
                     LSLTEKAADASRGLVREALPGLADGSLPRIDQKTLGPSTYFGGRKPADSRLDFDMTAG
                     EAFNQIRAVADPWPNAFLETAGGTVKVAWALPTELPCPRGCFRPSREGVLLGFADGAL
                     RIHALKADGVRLERPSDHASAFRILGVPEG"
     gene            4486..>5336
                     /locus_tag="VFV26_05255"
     CDS             4486..>5336
                     /locus_tag="VFV26_05255"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEX4845605.1"
                     /translation="MRLRVLPFLFSTALLLAGEDPFEAPPELQAFARHHTMARQGVSA
                     KVSALRKAFFAPPEEGGLGIVYDNAYTRTPKEAWRDRKANCLSLTALYVVACRSVGLE
                     ARYGEPLRISRWRRVGSTVRFERHVVAVVPSGTIGQELVADFLPEVRRDTQLIAPMEP
                     KRVLALFHSNRAVELLAESRIEDALASAHRSIQVDPAMGVGWNILGVVQRAQGLEAEA
                     EASFRKALAVDPRDGAPCGNMENLMRAQGRTEEAQTYRDRGLEIRKKDPFFNAFLAEE
                     ALGEGLL"
BASE COUNT          841 a         1697 c         1922 g          876 t
ORIGIN      
        1 ggtcttgaac tcgtcctgga gcttctgctt caccaggtcg gagatctcgt cgtacttggc
       61 ggccaggtcc agggcgggga tcttggcttc gccgagggtg tccgtgaagc ggctcatgat
      121 ggtcttgcgg agctgctcgg agatgtcggg cacggtgtag acgccgttgg tgcccaccag
      181 ctgcttgagg aaggtgccgc tgtccaccac cttgatggag tagatgccga aggcccggat
      241 gcgcagcatg ccgaagtcgg cgtcgcgcat catgatgggg ttcgaggtgc cccacttcag
      301 gtcgttgtag agcttggtgg agatgaagta gacatcgctc ttgaaggggc tttcgaagcc
      361 gtacttccag cccttcaggg tggcgaggat gggcaggttc tgggtggtga ggttgtgcgt
      421 gccgggcttg aacacgtccg ccagctggcc ttcgttgacg aagacggcct cctggctttc
      481 ccgcacgacc agcttgccgc cgttctggat ctcctggccc cgcatgggga agcgccaggc
      541 cagggtgtcg ttggaatcgt ccagccattc gaggatgtcg aggaattggg ctttgcccca
      601 gtccatcaga cccatgtgtg gttctcctag cggcactggc cgcacgtacg attctagggc
      661 ggcctgtcaa gccgggcagg cctggaccag gcaaaaaccg gcgaaccgtc gccatggacc
      721 ggagagccgg gcctagcggg tgccccggac ggtgcgcagc gggccctccg cctggctttt
      781 cccaccgggc tggtcgatgc gggtcttgct gtggaccatg cgggtgtccg agtcgatgat
      841 gcagcgccaa cccttctcgt catggggcat ccggacatcc acttcccagc ctccggaggc
      901 gccgttgagg gggatgcgcc gggcgctgaa ggccttcccg ccggtctcgc gctcggcgat
      961 ggccttggcc tccgcggcac tcttcaccag acctgtggcc gacttgcggg atttcgcggt
     1021 agctgcggat aggacgaggg cgggaaccag cgccaaggcg gcgccgaggg ccagagggcg
     1081 gatgcgcatg gggactcctg ggtttgccag gattctaggt ggctcccggt ggccctggca
     1141 accggctttc agcccccgcc gaagattgcc cggacgtagg tgccgatgta gtagccgata
     1201 tagtttgcga tgacatagcc ccagacgccg gtgaggagcg ccgggaggac cagggcgttc
     1261 caccccttgc cgatggccat ggccgcggcg gtggtggggc cgcccacatt ggcgttggag
     1321 gcgatgagca gcacctccag atcctgccgg gtgagcctgc ccaccaccag ggtgacgagc
     1381 aggttgaccg ccaggatgat ggccgcgtag gccaggagga tgggactctc ccggaccacg
     1441 ctggtgatgg aggccggcac gccgatgacc acgaagaaca ggtagatgag gagggtgccc
     1501 aattcccggg cgccccggat ctccgaaaag aagcggggga aggcggaggc cagggccacg
     1561 gtcagggccg tgatgagcag gtacttctgt ccgatgaggc ccttcacgaa ggggggcagg
     1621 ccgctggccc cgatggcgcc cgccgccttg actgagattg cgacgatgag gaccgcgcag
     1681 gccagcgcgg cggacaggtc cttgagggag atctcgctgc gcccccagta gctggcggca
     1741 tggttgttcc cattcccgcc cggcttggcc tcgagttcat ccagcagtgg cgtgtggaac
     1801 ctccgccgga tgaaggccac cccgggcagg gccgtgagca gcccgaagaa gaccgccatc
     1861 agcaggttgt ccgccaccag ccctgcgttg atgaggcccg gggagacccg gaaggcctcg
     1921 gacatggcca catagttgac gctgccgccg atgtagctgc cggagaacat ggccgagatg
     1981 ccgccgatct cggggatccg gctccccagg agggcggtgg cgaggatggt gcccagcacg
     2041 gtgcccaggg cggagatgtg gaaggccccg aaggcccggc cactttcccg ccagatcttc
     2101 cggatgtccg cggtgaacag caggagcggc accgccatgg gcaccacgta ggtccagacg
     2161 ctgtcgtaga ccgggctcgc cgtgggcacc aggcccacat tggcgaacag cagcccgccg
     2221 ccgagggcca ggatgcagcc tgagacggcc gaggcccagc ggtagcgctg ctccaggtgg
     2281 atgctgacgg cggcccaggc gaacaggaag gcccagagcg cccaggtatc atcgggcttg
     2341 atcagtgtca tcgaggctcc ttcgggggag gcgggcggcc ctcgccgttc aggcccggta
     2401 gagggcggca ccccagtgga ggccggatcc cagggcggtg aagacgaggt tcatgccggg
     2461 acggatgagg ccctgggccc ggcactcgtg gaagaggatg ggcagggtgg cggcggtggt
     2521 gttgccgtag cgctcgatgt tgtggggcac cttctcgggc ggcaggccca gggccttctg
     2581 cacaccttcg atgatgcgga ggttggcctg gtggaccagc accaggtcca ggtcctccac
     2641 ggccaggccg gaagtctcgc agacctcacg gaccgcctgg ggcatcaggg tcacggcagc
     2701 cttgaagacc tccttgccgg acatgacggg aagggtttcg ctggattcaa tctgctcgtg
     2761 ggtgacaaag ggccgccgct tgaagctggc gcccagcatg gtgagcaccc ctgcgcccgt
     2821 gccatcggtg tggagtcgga tcgtccccag gccggctccg ccttcccgcg gctcgatgac
     2881 cacggccccc gcgccgtcac cgaagagcac cgtgcggtcc cggctgaggg tgttctcggc
     2941 gcgctcggcg tcggtgatgt cccgggtgga ctgcccgatg agggtgtccc agcccagatg
     3001 ccagggcatg aagggcgtgt ggacttccgc gcccaccagg agcacgcgcc ggtagcggcc
     3061 actctggatg aacaggtccg ccagttccag gccatagagg aacccgctgc actgctggcg
     3121 gatgtcgaag gtggggacgt cccccaggcc cagggctgcc tggagaaggg gcccgttgcc
     3181 tggcagcaca tggtccggcg tcatggtggc gaagacgacc gcatcgatgt cggcggggga
     3241 caggcccgcg tcggcgatgg cattccgggc ggcgatcacg ccgaggtccg tggaaccctg
     3301 gcccggttcg gcgtagcgcc gctcctggat gccgctgcgc acccggatcc actcgtccga
     3361 ggtgtccatg agtcgcgaca gcgcctcgtt cgtgacgaca tgcggaggca ggccgacgcc
     3421 ggttccggtg atgacgcttc gcatggacgt cctttcagtg ctgggagcgc gtcagcatac
     3481 ccaacttcac ccctcgggca cacccaggat gcggaaggcg gaagcgtggt cgctgggccg
     3541 ttcgaggcgc accccgtcgg ccttcagggc gtggatgcgg agggccccgt cggcgaaccc
     3601 cagcagcaca ccttcccgcg aaggccggaa gcagccccgg gggcagggca gctccgtggg
     3661 cagggcccag gccaccttga cggtgcctcc ggcggtttcg aggaaggcgt tgggccaggg
     3721 atcggccacg gcacggatct ggttgaaggc ctctccggcc gtcatgtcga aatccaggcg
     3781 ggagtccgct ggcttccgcc cgccgaaata ggtggaaggt cccagggtct tctggtcgat
     3841 gcggggcagg ctgccgtccg ccagcccggg gagggcctcg cgcaccaggc cccggctggc
     3901 atcggcggcc ttctcggtga ggctcagggc ggtctcgtcc cagtcgatgg agagcctggc
     3961 ctgggccacg atatggccgt cgtcgggttt tggagtcatg gcatgcaggg tgacgccggt
     4021 gtcggtctcc cccttcacca gcacccagtt gatgggcgcc cggccgcggt atttcggcag
     4081 caggctgccg tgcaggttgt aggcgccgag cctggggagc tccaggaacc gcgcctggat
     4141 catctcccgg aagtagaagc tgaagaggaa gtccggccgg tgggcccgga tggcctcgaa
     4201 aaccgtgtcc tcgttgaatg agggcgccat gtggatgggg atcccctggg cttcggcgat
     4261 ggccgcgggc ggcgtgaacc accgttcgtc ggccccctgg gcataggtgt acagggcctt
     4321 cacctcgacc ccggcctcca gcaggccctc cagggccgag gttcccacgc tggaataggc
     4381 gcacacaacg gcagtggggc tcggcataat ccctccatcc accagcatct cataacctgt
     4441 tggccctgct gtccgtagcc atgtatgtcg atccgggagc cccccatgcg cctgcgtgtc
     4501 ctgcccttcc tgttcagcac cgcgctgctg ctggctggcg aggatccctt cgaggcgcct
     4561 ccggaactcc aggccttcgc gcgccatcac accatggccc ggcagggtgt ttccgccaag
     4621 gtgtcggccc tccgcaaggc cttcttcgcg ccccccgaag agggggggct cggcatcgtc
     4681 tacgacaatg cctatacccg gactcccaag gaggcctggc gtgatcgcaa ggccaactgc
     4741 ctcagcctca cggccctcta tgtggtggcc tgcaggtccg tcggtcttga ggcgaggtac
     4801 ggcgagccgc tgcgtatcag ccggtggcgc cgtgtgggct ccaccgtgcg gttcgaacgg
     4861 catgtggtgg ccgtggtgcc atcaggcacc atcgggcagg aactggtggc cgacttcctg
     4921 cccgaagtgc gacgggacac ccagctcatc gcgcccatgg aacccaagcg cgtcctggcg
     4981 ctcttccaca gcaaccgggc ggtggagctg ctggccgagt cccgcatcga ggatgcgctg
     5041 gcctccgccc accgctccat ccaggtggat ccggccatgg gggtggggtg gaacatcctg
     5101 ggcgtggtgc agcgggccca gggcctggag gccgaggctg aggcctcctt ccggaaggcc
     5161 ctggcggtgg atccccggga tggcgccccc tgtgggaaca tggagaacct catgcgggcc
     5221 cagggccgga cggaggaggc ccagacctac cgggaccggg ggctcgagat ccggaagaag
     5281 gatcccttct tcaacgcgtt cctggcggag gaggcccttg gagaagggct gctgga
//
LOCUS       DASUDT010000255         5903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_940328, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000255 DASUDT010000000
VERSION     DASUDT010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5903
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940328"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VFV26_05260"
     CDS             <1..239
                     /locus_tag="VFV26_05260"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEX4845606.1"
                     /translation="GPEFVSSLKIIGGEPWKLKVKDANLTRRVRVKTGRLDRVTSLCG
                     YLQTPDGRVRVFAILLNGPAGDEDIWEQVSRWAN"
     gene            387..758
                     /locus_tag="VFV26_05265"
     CDS             387..758
                     /locus_tag="VFV26_05265"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845607.1"
                     /translation="MSRIAIVDDSRLIRTFIAGVLRAKGHETVEVDPVSLFEVLKVLR
                     GSPVDLLLADFLMPDCPGESLVRVCREDDALTGLPILMISAHRDDECLIRLQKLGISG
                     FLLKPVDPAMLVAKVDEALAG"
     gene            784..1674
                     /locus_tag="VFV26_05270"
     CDS             784..1674
                     /locus_tag="VFV26_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4845608.1"
                     /translation="MDGAQKPDARGLAALILGASLLGFAAMLVRWSAPAGPLAVGFYR
                     MAIALPPVAWLAWRARGSAGPDIGRARLWALVAGLCFVGDLWMWHASLHHTSAANATL
                     LVTLAPIWVAVVSVVWMGAKLRRRFWTGVILALGGALILGLAKGARWGSGLGELLGAL
                     ASLAYGAFTLALGRARQELSAPEALFWVVLCCTAGFGVLGVAQGEAFSGYPPRAWWAL
                     AGLGLGVQVAAWWLITWGMGHVPTNLGAMGLMTQPVATVILGWLLLGESVRPVQGLGT
                     LLVLAGIAACAFSPPASRTA"
     gene            complement(1869..3167)
                     /locus_tag="VFV26_05275"
     CDS             complement(1869..3167)
                     /locus_tag="VFV26_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/sulfonate/bicarbonate ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX4845609.1"
                     /translation="MQQARTSPICELRGVQMRFPGPRGKVQRVLEDIRLDVRPDEILC
                     IIGHNGSGKSTLLRLLAGLMPPTQGEVRHHGEKLDGLNPGVAMVFQSFALYPWMTVEE
                     NVRVVLRARDLPEGEVRERAHQAIRKVGLEGFEEAFPRELSRGTKQRVGVARALAVDP
                     EILVMDEPFSQVDALTAEALRAEIMDIWADKERNPSAILMVSQSIREALLMADRVAVL
                     SGSPGTLRTIVDVPLPRPRDSRSPEFMKLVDHLHDIITSAELPDVQVTVPVPSASQEE
                     DQVEPLPMVQSADILGLLEFLETQGGTSDLFQVASHTHVPFERVLTTVKAAEMLDLVD
                     TPKRSVLLTPLGKRFVNANMDDRKDLWRAQLLELRLFRVVQEMLHLEEGELPKEALLQ
                     EIATRLPMEDPEATFETIVAWGRFGELFAYREERGVLTPE"
     gene            complement(3175..4923)
                     /locus_tag="VFV26_05280"
     CDS             complement(3175..4923)
                     /locus_tag="VFV26_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4845610.1"
                     /translation="MIHRFLDTVWGQAMNLLTAPIRHRRWIDLLVLAALAGMLAALWL
                     VGKEWTAVQRPTVEIALSAWALPKYLLLSLIRAAAAYAVSLTFTLVVAYWAAKDPRAE
                     RILVPILDILQSVPLLAFLPPVLLLMLTVFPRSNVGLELSAVLLIVTCQAWNMAFSFY
                     QSLKTLPKELEETSSLYGFTWLQKLRWVELPFATPGLVWNSMVSVANSWFFLMSAEAF
                     RAGDKNFQLPGLGSYMNAAVEQGNTRAQIYAILTMLVLVILLDQLVWRPVVAWSQRFQ
                     VDEGAEVDPGDNWLLRLFRRSRLLKWLELRRSQRLLRRAPRPALIRKAREEIQRPGRL
                     GSWVVALAMVGILLLLALGGISIVRLLAEVSGAKWLMLLKAGGASLSRVLLSTFLATL
                     WTLPVGLWIGMSPKWSRRLQSVVQVAASFPSSLIFATLILVFQSMGIGLGVSCVLLMV
                     LSTQWYLLFNIIAGAQAIPADLREAASAYRMSLWKRCWNLYFPAVFPFLVTGWVTATG
                     GAWNASIITEIVTAKQHTLRTFGLGAEVVLATEQGSMPHLAASALLMAALVVLFNRLV
                     WVPLYRLAETRYALNR"
     gene            complement(5148..>5903)
                     /locus_tag="VFV26_05285"
     CDS             complement(5148..>5903)
                     /locus_tag="VFV26_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX4845611.1"
                     /translation="RIQFTPDLLPSDVVGTLVFDPKQLTFTPKRGPIFANLLLADEIN
                     RAPSKVQAALLEAMEERQVTLGEESFPLPDPFLVLATQNPLEQEGTFPLPEAQMDRFL
                     FKLRVDYPHHEEEIEVLRRAHLTGDEVRPVVDGPFLLAAGRQAQQVRLDDAIRAYIVR
                     LVQATRPGHGKAWKGKELLRCGASPRASLSLQAASRALAYLHGRDHVLPQDVVDLAPD
                     VLRHRLLLTFESEADGATTDQVIAQLLQALPRP"
BASE COUNT          912 a         1929 c         2154 g          908 t
ORIGIN      
        1 tggggcccga gttcgtctcg tcgctgaaga tcatcggggg cgagccctgg aagctgaagg
       61 tcaaggatgc gaacctcacc cgccgcgtgc gggtgaagac gggccgcctg gaccgggtca
      121 ccagcctctg cggctacctc cagacccccg acggccgcgt gcgggttttc gccatcctgc
      181 tgaacgggcc tgcgggggac gaggatatct gggagcaggt gtcccgctgg gcgaactagg
      241 gttggtttca gtgggggggc cgcgcacacc cagatttgaa ggcaggccct aggcaaaacc
      301 cggtttgttg ccatcccgcg cgaaaagccc gggccaaaaa gttgagcggc gggtctccaa
      361 ggacgatgaa ttcttgagga gacttcatgt cccgcattgc catcgtggat gatagccgcc
      421 tgatccggac cttcatcgca ggggtcctga gggccaaggg ccacgagacg gtggaggtgg
      481 atccggtctc cctgttcgaa gtgctcaagg tgctgcgggg ctccccggtg gaccttctcc
      541 tggcggattt cctcatgccc gactgccccg gggaaagcct ggtgcgggtc tgccgggagg
      601 acgacgcgct cacgggcctg cccatcctca tgatctccgc ccatcgggat gacgaatgcc
      661 tgatccgcct gcagaagctg ggcatctcgg gcttcctgct gaagccggtg gatccggcca
      721 tgctcgtggc caaggtggac gaggcccttg cgggctgatc cccccggcgg tgatgctgga
      781 tccatggatg gagcgcagaa gccggacgcg aggggcctgg cggccctgat cctcggggcg
      841 tcgctcctgg gattcgcggc catgctggtg cgctggtccg ccccggccgg ccccctggcc
      901 gtggggttct accgcatggc catcgccctg ccgcccgtgg cctggctggc ctggcgggcc
      961 cggggttccg ccgggcccga catcggccgg gcccggctct gggccctcgt ggcgggcctc
     1021 tgcttcgtgg gggatctgtg gatgtggcac gcgtccctcc accacacgag cgcggccaac
     1081 gccaccctgc tggtgacgct ggcgcccatc tgggtggccg tggtctccgt ggtctggatg
     1141 ggcgcgaagc tgcgccgccg cttctggacc ggggtgatcc tggccctggg gggagccctg
     1201 atcctgggcc tggccaaggg cgcccgctgg ggatcgggcc tgggcgagct gctgggggcc
     1261 ctggcctcgc tggcctacgg cgccttcacc ctggccctgg gccgcgcccg ccaggagctc
     1321 agcgcgcctg aggccctgtt ctgggtcgtc ctctgctgca cggcgggctt cggggtcctg
     1381 ggggttgcgc aaggtgaggc cttcagcggc tatccgcccc gggcctggtg ggccctggcg
     1441 ggcctgggcc tgggtgtgca ggtggccgcc tggtggctca tcacctgggg catgggccat
     1501 gtgcccacga acctgggcgc catggggctc atgacccagc ccgtggccac ggtcatcctg
     1561 ggctggctgc tgctggggga atccgtgcgg cccgtccagg gtctcggcac gctgctggtg
     1621 ctggcgggca tcgccgcctg cgccttcagc ccgccggcgt cgaggaccgc atgatccgga
     1681 ttgaatgaac aaaagccaaa agatcaccac caagacacca aggcaccaag aactgccaat
     1741 gcatgccacc tgaaatgcct ggatcaccag agcaattgac tttgtgcttt tcttggtgtc
     1801 ttggtgtctt ggtgtcttgg tggtgaaaat ctttttcttt ttggcctcag cacctattgg
     1861 gacgagcgct actccggtgt gaggacgccc cgctcctcgc ggtaggcgaa gagttccccg
     1921 aaacggcccc acgcgacgat ggtctcgaag gtcgcttcgg gatcctccat gggcaggcgg
     1981 gtggcgatct cctggagcag ggcctccttg ggcagctcgc cctcctcaag gtgcagcatc
     2041 tcctggacca cgcggaacaa ccgcagctcc aggagctggg cccgccacag gtccttgcgg
     2101 tcatccatgt tggcgttcac gaagcgcttg cccaggggcg tgagcagcac gctgcgcttg
     2161 ggcgtgtcca ccagatccag catctcggcg gccttcacgg tggtgagcac gcgctcgaag
     2221 ggcacgtggg tgtgcgaggc cacctggaag aggtcgctgg tgccgccctg ggtctccagg
     2281 aattccagca ggcccaggat gtcggcgctc tggaccatgg gcaggggctc cacctggtcc
     2341 tcctcctgcg aggcgctggg cacgggcacc gtgacctgga catccggcag ttcggcgctg
     2401 gtgatgatgt cgtggaggtg gtccaccagc ttcatgaact cgggggagcg gctgtcccgg
     2461 gggcggggca ggggcacgtc cacgatggtc cgcagggtgc cggggctgcc ggacagcacc
     2521 gccacgcggt cggccatgag cagggcctcg cggatggact ggctcaccat caggatcgcc
     2581 gaggggttgc gctccttgtc cgcccagatg tccatgatct cggcccgcag cgcctctgcc
     2641 gtgagggcgt ccacctggct gaagggctcg tccatcacca ggatctcggg atccacggcc
     2701 agggcccggg ccacgcccac gcgctgcttg gtgccgcggg acagctcccg ggggaaggcc
     2761 tcttcgaagc cttccaggcc caccttgcgg atggcctggt gggcccgctc gcggacctcg
     2821 ccttccggca ggtcccgggc gcggagcacc acgcggacgt tctcctccac ggtcatccag
     2881 gggtagaggg cgaagctctg gaacaccatg gccaccccgg gattcaggcc gtccagcttc
     2941 tccccgtggt ggcgcacctc gccctgggtg ggcggcatga ggccggcgag caggcgcagg
     3001 agcgtggact tgccggaacc gttgtggccg atgatgcaga ggatctcgtc cggccgcaca
     3061 tcgaggcgga tgtcctccag cacgcgctgc accttgcccc gagggccggg gaagcgcatc
     3121 tggacgccgc ggagttcaca gatgggagag gtgcgggcct gctgcatatc cacctcagcg
     3181 gttgagcgcg tagcgggttt cggccaggcg gtagaggggc acccagacga gacggttgaa
     3241 gaggacgacc agggccgcca tgagcagggc gctggcggcc agatggggca tggagccctg
     3301 ctccgtggcc agcaccacct cggcgcccag gccgaaggtg cggagcgtgt gctgcttggc
     3361 ggtgacgatc tccgtgatga tgctcgcgtt ccaggctccg cccgtggcgg tcacccagcc
     3421 ggtcaccagg aaggggaaca ccgccgggaa atagaggttc cagcagcgct tccacagcga
     3481 catccggtag gccgaggccg cttcgcgcag gtccgccggg atggcctggg cccccgcgat
     3541 gatgttgaag aggagatacc actgggtgga cagcaccatg agcagcacgc agctcacgcc
     3601 gaggccgatg cccatggact ggaagaccag gatgagcgtg gcgaagatca gggaggaggg
     3661 gaacgaggcg gccacctgca ccacggactg gaggcgccgc gaccacttgg gcgacatgcc
     3721 gatccacagg cccacgggca gggtccacag ggtggccagg aaggtggaga gcagcacccg
     3781 ggacagcgag gctcccccgg ccttgagaag catcagccac ttggcgccgc tcacctcggc
     3841 cagcaggcgc acgatggaga tgcctcccag ggccagcagc aggaggatgc ccaccatggc
     3901 cagggccacc acccaggaac ccagccggcc cggccgctgg atctcttcgc gggccttgcg
     3961 gatgagggcg gggcggggcg cccggcgcag cagccgctgg ctccgccgca gctccagcca
     4021 cttcaggagg cgcgagcgcc ggaacaagcg cagcagccag ttgtcgccgg ggtccacctc
     4081 ggcgccctcg tccacctgga agcgctggga ccaggccacc acgggccgcc agaccagctg
     4141 gtccagcagg atcaccagca ccagcatggt gaggatggcg tagatctggg cccgggtgtt
     4201 cccctgctcc accgcggcgt tcatgtacga gcccagtccc ggcagctgga agttcttgtc
     4261 gccagcgcgg aaggcctcgg cggacatgag gaagaaccag ctgttcgcca cgctcaccat
     4321 ggagttccac accagccccg gcgtggcgaa gggaagctcc acccagcgca gcttctggag
     4381 ccaggtgaag ccatagaggc tggaggtctc ctccagctcc ttgggcaggg tcttcagcga
     4441 ctggtagaag ctgaaggcca tgttccaggc ctggcaggtg acgatgagca gcacggcgga
     4501 caactccagc ccgacgttgc tgcggggaaa gaccgtgagc atgagcagca gcaccggcgg
     4561 caggaaggcc agcaggggca cgctctggag gatgtcgagg atgggcacca ggatgcgttc
     4621 ggccctagga tccttggcag cccagtaggc caccaccagc gtgaaggtga gggacaccgc
     4681 ataggccgcg gcagcccgga tcagggacag cagcaggtac ttgggcaggg cccaggcgct
     4741 gagggcgatc tccaccgtgg gccgctggac ggcggtccac tccttcccca ccagccagag
     4801 cgccgccagc atgcccgcga gggccgccag cacgagcagg tcgatccagc ggcggtgccg
     4861 gatgggcgcc gtgagcaggt tcatcgcctg gccccagacg gtgtcgagga agcggtggat
     4921 catggccggt ccggaggagc ggatgcggcg cggcggggcg cgtcgccatc ccgttcaggg
     4981 ggcggaatcg ggggagcggg tggaggccgc ctcagcgggc ggcgcaccac gacggaggtt
     5041 cggaggggtc ggcatgtcgt cccatcggac ctcctttccg gcgccagggc caaaagccag
     5101 tctgaccgcc cggtcaggag ggggtcaacc cgggaaatgc ccgatattca gggccggggc
     5161 agggcctgga gcagctgcgc gatgacctgg tccgtggtgg ccccgtcggc ctcgctttcg
     5221 aaggtgagca ggagccggtg gcgcagcacg tccggcgcca gatcgaccac atcctggggc
     5281 agcacgtggt cgcggccgtg gaggtaggcc agggcccgcg aggccgcctg gagggacagc
     5341 gaggcccggg ggctggcccc gcagcgcagc agctccttgc ccttccaggc cttgccgtgg
     5401 ccgggccgcg tggcctgcac cagccgcacg atgtaggcgc ggatggcatc gtccaggcgc
     5461 acctgctgcg cctggcggcc cgccgccagc aggaaggggc cgtccaccac ggggcggacc
     5521 tcgtcgccgg tgaggtgggc gcggcgcagg acctcgatct cctcctcgtg gtgggggtag
     5581 tccacccgga gcttgaagag gaaccggtcc atctgggcct cgggcagggg gaaggtgccc
     5641 tcctgctcca gggggttctg cgtggccagc accaggaagg ggtccggcag ggggaagctc
     5701 tcctcgccca gcgtcacctg gcgctcctcc atggcctcca gcagcgccgc ctgcaccttg
     5761 gacggggccc ggttgatctc gtccgccagc agcaggttcg cgaagatggg gccgcgtttg
     5821 ggcgtgaagg tgagctgctt ggggtcgaag accagcgtgc ccaccacgtc gctgggcagc
     5881 aggtccggcg tgaactggat gcg
//
LOCUS       DASUDT010000256         2702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_255264, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000256 DASUDT010000000
VERSION     DASUDT010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255264"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1860)
                     /locus_tag="VFV26_05290"
     CDS             complement(<1..1860)
                     /locus_tag="VFV26_05290"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845612.1"
                     /translation="MAIDRVKVKKEADKLLTSGKVERAIEEFHKLVEDNPKDYSTLNQ
                     IGDLYVQIGRVKEGVEIHKRLGGSYERDGFHARSAAIFQKVVRNAPDDIDAAQRLADL
                     YRQMNKVTDAVKVHLQVAEHFQKKGLMKRALEEFNKVVDLDPKNLKMKVKLADLYNKE
                     GMKDRAAGIYLEVAESLAMEQMHGEANQILERAKAMISTPHVFLTQSRLGVIQGDYAT
                     AARHLREGLALNPRNTELLEALAEIELRSGHPDRAIESLAEIAQLPEKTLPLCEKALR
                     NLVNADRAEEGLRLFAPIARELARRGSGDTVGRTLRAALQNHMNVEAWALLAEIAHQS
                     GNRADQIHALQSAYSLAHHANDQALIGRLSGQIQALGAVPDASGQPPAAVPQPGFSGG
                     FQAPSPQESTRHGGETEVDPIRRLRIEQLSREAEALLRGGSPDRAVETYKKALELDPA
                     DMAIIEAIVAVHRTTGHLTKVQMQYAQSAQALAQLGKKREASLLLDMAEQLFPGSTRI
                     YRRSMGLPEPGAPAPAAPAASITLPPPTSDLDMLIGLDVPGFEPPPPARAVPPSAPAP
                     MAIPLGDGLPVLPDPFAPAPAAASPAPMEAALDASDLGWMDETLTELPVDLPPP"
     gene            complement(1937..2353)
                     /locus_tag="VFV26_05295"
     CDS             complement(1937..2353)
                     /locus_tag="VFV26_05295"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF004064.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEX4845613.1"
                     /translation="MFDDPQSPAWTPLLEAAWKAREHAHAPYSHFQVGAALLTASGDI
                     VGGCNVENAAYPVTLCAERGALSAAVAAGLRPGGLVAAVVVTDVAQLTPPCGACRQAL
                     AEFAGPLPVLLANRSIRALHCLEDLLPHSFTGRNFL"
     gene            complement(2374..>2702)
                     /locus_tag="VFV26_05300"
     CDS             complement(2374..>2702)
                     /locus_tag="VFV26_05300"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX4845614.1"
                     /translation="GDPPGRVHWKRTAQRSQPWVRTFQEDRPQGLHLRLDLTAWAPGR
                     AFEREVERLSGAVLQARLQKREVSLELHASREARDVQGHTPCWRALALASAEGAGDRA
                     GEAPLS"
BASE COUNT          355 a          867 c         1041 g          439 t
ORIGIN      
        1 gggggggggc agatcgaccg gcagctccgt gagagtctcg tccatccagc ccaggtccga
       61 ggcgtcgaga gctgcctcca tgggggcggg ggacgccgcg gcgggggccg gagcaaaggg
      121 atccggcagc acgggcaggc catcgcccag ggggatggcc atgggggccg gggcggaggg
      181 cgggacggct cgggccgggg ggggcggctc gaagcccggc acgtccagcc cgatgagcat
      241 gtccaggtcg ctggtggggg gcggcagggt gatggaggcg gcaggagccg caggggcggg
      301 ggctccgggt tccggcagtc ccatggagcg ccggtagatg cgggtggagc ccgggaagag
      361 ctgctcggcc atgtccagca gcagcgaagc ctcccgcttc ttgccgagct gggccagggc
      421 ctgggcgctc tgggcgtact gcatctgcac cttggtgaga tggcccgtgg tgcggtgcac
      481 tgcgacgatg gcctcgatga tggccatgtc ggcgggatcg agttccaggg ccttcttgta
      541 ggtctccacc gcacggtcgg gactgccgcc ccggagaagg gcctcggcct cccgggacag
      601 ctgttcaatg cgcagccgcc ggatgggatc gacctcggtc tcgccgccgt ggcgggtgga
      661 ctcctggggg ctgggggcct ggaagccgcc ggagaatccg ggttggggga cggcggcagg
      721 aggctgcccc gaggcatcgg gaacggcgcc cagggcctgg atctggcccg acaggcgccc
      781 gatgagcgcc tggtcgttgg cgtggtgggc caggctgtag gcgctctgga gggcgtggat
      841 ctggtccgcg cggttgccgc tctggtgggc gatctcggcg aggagggccc aggcctccac
      901 attcatgtgg ttctgcaggg ccgcgcggag ggtgcgaccc acggtatcgc cggaaccccg
      961 ccgggcgagc tcgcgggcga tgggcgcgaa gagccgcagg ccctcctcgg cccggtccgc
     1021 gttcaccagg ttgcggagcg ccttttcgca gagcggcagg gtcttctcgg gaagctgggc
     1081 gatctcggcc agggactcga tggcccggtc ggggtgtccg ctgcgcagct cgatctccgc
     1141 cagggcctcc agcagctcgg tgttcctggg attgagggcc aggccctccc gcaggtgccg
     1201 ggccgccgtg gcgtagtcgc cctggatcac ccccaggcgg ctctgggtga ggaagacgtg
     1261 gggcgtggag atcatcgcct tggcgcgctc gaggatctgg ttcgcctccc cgtgcatctg
     1321 ctccatggcc agggattcgg ccacttccag atagatgccc gcggcccggt ccttcatgcc
     1381 ctccttgttg tagaggtccg ccagcttgac cttcatcttc aggttcttgg ggtcgaggtc
     1441 gacgaccttg ttgaactcct ccagggcccg cttcatgagg cccttcttct ggaagtgctc
     1501 ggccacctgc aggtggacct tcaccgcgtc cgtgaccttg ttcatctggc ggtagaggtc
     1561 cgccaggcgc tgggccgcgt cgatgtcatc gggcgcgttg cgcaccacct tctggaagat
     1621 ggcggcggag cgggcatgga agccgtcccg ttcgtaggaa ccgcccaggc gcttgtggat
     1681 ctccacgccc tccttcaccc gcccgatctg cacgtagaga tcgccgatct ggttcagggt
     1741 ggagtagtcc ttggggttgt cctcgacgag tttgtggaac tcctcgatgg cccgttcgac
     1801 cttgcccgac gtcaagagtt tgtcggcttc cttcttgact ttgacgcgat caatggccat
     1861 tcactgcctc gggatgcctg cgggttcgga aagtgtaggc cgggggcgcc tgccttggat
     1921 agggctgccg gcgggcctac aggaagttgc ggcccgtgaa gctgtggggc agcagatcct
     1981 ccaggcagtg cagcgcacgg atgctccggt tggcaaggag cacgggcagg ggccccgcga
     2041 attcggccag ggcctggcgg caggcgccac agggcggcgt cagctgggcc acgtccgtca
     2101 ccaccaccgc ggccaccagt cccccggggc gcaggccggc ggccacggcc gcgctgaggg
     2161 cgccccgctc ggcgcagagg gtgacggggt aggcagcgtt ttccacgttg catcccccca
     2221 cgatgtcgcc ggaggccgtg aggagggcag cgcccacctg gaaatgggaa tagggcgcgt
     2281 gggcatgttc ccgggccttc caggccgcct ccagcagcgg cgtccaggcg ggggattgcg
     2341 gatcatcgaa cacggcggcc tctcgggaga tcttcagctt agcggagctt cgccggcccg
     2401 gtccccggcg ccctcggcgg atgccagggc cagggcgcgc cagcaggggg tgtggccctg
     2461 cacatcccgg gcctcccggg aggcatggag ttccaggctg acctcgcgct tctgcaggcg
     2521 ggcctggagc acggcgcccg acaggcgctc cacctcgcgc tcgaaggcgc ggcccggggc
     2581 ccaggcggtg aggtccaggc gcaggtgcag cccctggggc cggtcctcct ggaaggtgcg
     2641 cacccagggc tggctgcgct gggcggtgcg cttccagtgg actcggccgg gcggatcgcc
     2701 ca
//
LOCUS       DASUDT010000257         5639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1117069, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000257 DASUDT010000000
VERSION     DASUDT010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5639
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1117069"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..3066)
                     /gene="secD"
                     /locus_tag="VFV26_05305"
     CDS             complement(220..3066)
                     /gene="secD"
                     /locus_tag="VFV26_05305"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX4845615.1"
                     /translation="MTKRSLWRLVIVLAVLFGCGYFFTPLSKVKLGLDLRGGVHFELE
                     VQGQEALAADLRDNKDRLFARLREKGLPAATVRMDGDALRVEGAGADQKATVEKIAKD
                     FFSGYAFAADGDAYRLTQKPDYQKQLKDDANKRALEVIEKRIRDIDPANVLEPEITAS
                     GAEGNRIVVEIPGIEEGDRERIKTLLATPGRLEQRLVAKAPQVYFNSKEEALAFFKGQ
                     IPQEFELLPEIESERQAKRSGQPVVKAKPGEEKISKWVLLESRVAVDGADIIDSHRAS
                     NSQTEANEVNFTLNKKGDDDFARLTGIASEESRYIAIVLDRKIITELTAKEKIIGGAV
                     RISGNFSAQEADDLASQLRSGALRAPMKFLEERVVGPGLGRDSIHMGVRSALIGFATI
                     IGFMVIFYRWSGVNAIVALTVNVIVMMGLLGSFRATLTLPGIAGFVLTVGMAVDANIL
                     IFERIKEELALGKSVSGAIDAGFDRVFWTIVDSHVTQLFAALLLFIFGTGPVKGFAVT
                     LTVGAVASLFTSIYISRYIYDWILERHPGTKTLSIGAFSFFKGSSYDFMKYKGTALAI
                     TWGLIVLCILYVRPWNLTNNNRIQLGMQFVGGNDMTVRFRGAMEPEIIRDVLAKNGYA
                     DASVVAYENADKSVRDFSVKVKAKKDGDQKDSTIQANALRAIFKQMDPEAANSPLPAL
                     NLEGSKTLADALVKANPVGLGGDDSVLLAAYSPLAEKVIAGRDRLPSGLYQGFAELPQ
                     DLPQAVQETVRKTYRLGSVGILKDESFSPSISGEWTRKTLTAVAWALAAILVYVMFRF
                     TASFAIGGIVALVHDMLMALGIFAAFGYEFNVPVVASFLTLMGYSMADTIVVFDRIRE
                     NSHRPEFRRATISKLVNDSINQTLGRTILTSMSVLFVSVCLWLFGGPALRDLAFPLVI
                     GVITGTYSSIYIASPVVVYWDQWFGGKDKLKQHA"
     gene            complement(3125..3439)
                     /gene="yajC"
                     /locus_tag="VFV26_05310"
     CDS             complement(3125..3439)
                     /gene="yajC"
                     /locus_tag="VFV26_05310"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX4845616.1"
                     /translation="MIYALLQQPAAAGGGPAWIQFVFIGGMALMFYFLLIRPQSKARK
                     EMEARLSKLKAGDEVVLTSGLYATIDRVEDKHIWLKFGGSVIKARRAAVASLANEPET
                     QN"
     gene            complement(3440..4588)
                     /gene="tgt"
                     /locus_tag="VFV26_05315"
     CDS             complement(3440..4588)
                     /gene="tgt"
                     /locus_tag="VFV26_05315"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX4845617.1"
                     /translation="MPQITSPDFSFTQASGLASGPARAGAFHTSHGEVLTPAFMPVGT
                     QGTVKGITPTQLRDIGPQVILGNTYHLGLRPGDALVARHGGLHRFMGWEGPILTDSGG
                     FQVFSLASLRKMTEDGVTFQSHLDGSPQFLSPERSLEIQRNLGSDICMALDECPPGRM
                     ERSKLELSMARTTRWLARSRAVPLQPHQGLFAINQGGTHLDLRRRHLAEAMELDAKTP
                     FQGFAVGGLSVGEPKEEMNAVLAEFVKELPEGRPRYLMGVGTPEDLLFGIEQGVDLFD
                     CVLPSREARHGRILTSRGKLNLKNARHREADLPLDPACGCYTCRTFSRAYLHHLFRCG
                     ELLGFTLNTIHNLSYTVGLTRAARQALLEKRFPAFAQSARAGWMTEEP"
     gene            4853..5626
                     /locus_tag="VFV26_05320"
     CDS             4853..5626
                     /locus_tag="VFV26_05320"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX4845618.1"
                     /translation="MSKDPKKSAPTKTAPPVETLEDAVYRSSLSAGNDAIKRGNPKVT
                     IPTTVAMYALFAFAAFQLAKQTEVGKKVIKTVGIELAEQLEDAPPPPPPPPPPPPPPP
                     PPMAVSTAKVDTTPIDPRQEVVPEQAPKELPKQDLSLGGVPGGVIGGVVGGVVGGVVG
                     GTGKVVDFDFSQIKVKYQPPPPPYPPLAKIAKVQGTVVVEIVVGPDGVPTSAVAKEGP
                     PQLRPTAEAYAMQWKFEPALLNGAPQYARFKLTMPFRLR"
BASE COUNT          945 a         1814 c         1918 g          962 t
ORIGIN      
        1 cttcgaccac aagatctaca aggacgcccc cggcggccac agcttcaacc gcatcgacac
       61 caccgtcgcc agggaatccc gcaaggagat ctacgcgttc ctcgagaagc acctgaaata
      121 ggccacagcg cttatcggga aaaagaagaa gcccggctca gccgggcttc ttcgcggggg
      181 tccgggggtg tgcgcgcagc gcggaacccc cggacaacat caggcgtgct gcttcaactt
      241 gtccttgcca ccgaaccact ggtcccagta caccaccacg gggctggcga tgtagatgga
      301 cgagtaggtg ccggtgatga cgccgatgac cagggggaag gccaggtccc tgagggccgg
      361 gccgccgaag agccagaggc agacgctgac gaagagcacc gacatggacg tgaggatcgt
      421 gcggcccagg gtctggttga tggagtcgtt caccagcttg gagatggtgg cgcgccggaa
      481 ctcggggcgg tggctgttct cgcggatgcg gtcgaagacc acgatggtgt ccgccatgga
      541 gtagcccatg agggtgagga agctggccac caccggcacg ttgaactcat agccgaaggc
      601 cgcgaagatc cccagggcca tgagcatgtc gtggaccagg gccacgatgc cgccgatggc
      661 gaagctggcc gtgaagcgga acatcacgta gaccaggatg gcggccaggg cccaggccac
      721 agccgtgagg gtcttgcggg tccactcgcc ggagatgctg ggcgagaagc tctcgtcctt
      781 gaggatgccc acggagccga ggcggtaggt cttccggacc gtttcctgca cggcctgggg
      841 cagatcctgg ggcagctcgg cgaagccctg gtagaggccc gagggcagcc ggtcgcggcc
      901 ggcgatgacc ttttccgcca ggggcgagta cgcagcgagg aggaccgagt catccccgcc
      961 aaggccaacg ggattggcct tcaccagggc gtcggccagg gtcttggaac cctcgaggtt
     1021 gagcgccgga agggggctgt tcgccgcctc gggatccatc tgcttgaaga tggcgcgcag
     1081 ggcgttggcc tggatggtgc tgtccttctg gtccccgtcc ttcttggcct tcaccttcac
     1141 ggagaagtcc cggacgctct tgtcggcatt ctcgtaggcc accacgctgg catcggcgta
     1201 gccgttcttc gccagcacgt cccggatgat ttccggctcc atggccccgc ggaagcgcac
     1261 cgtcatgtcg ttgccgccca cgaactgcat gcccagctgg atccggttgt tgttggtgag
     1321 gttccagggc cgcacataga ggatgcagag cacgatgagg ccccaggtga tggccagggc
     1381 cgtgcccttg tacttcatga agtcgtagct ggaccccttg aagaagctga aggcgccgat
     1441 ggagagggtc ttggtgcccg ggtggcgttc gaggatccag tcgtagatgt agcggctgat
     1501 gtagatgctg gtgaacagcg aggccacggc gcccacggtg agggtcaccg cgaagccctt
     1561 cacggggccc gtgccgaaga tgaacagcag cagggccgcg aacagctggg tcacgtggct
     1621 gtccacgatg gtccagaaca cgcggtcgaa gcccgcgtcg atggcgccgg acacactctt
     1681 gcccagggcc agctcctcct tgatgcgctc gaagatgagg atgttggcgt ccaccgccat
     1741 gcccaccgtc agcacgaagc cggcgatgcc cggcagcgtc agggtggccc ggaaggagcc
     1801 cagcaggccc atcatcacga tgacgttcac cgtcagggcc acgatggcgt tcacgccgga
     1861 ccagcggtag aagatcacca tgaagccgat gatggtggcg aagccgatga gggcggagcg
     1921 gacgcccatg tggatggaat cgcggcccag gccggggccc accacgcgct cttccaggaa
     1981 cttcatgggc gcgcgcaggg cgccgctgcg gagctggctg gccaggtcgt cggcctcctg
     2041 ggcgctgaag ttgccgctga tgcggaccgc gccgccgatg atcttctcct tggcggtcag
     2101 ctcggtgatg atcttccggt ccagcacgat ggcgatgtag cggctttctt ccgaggcgat
     2161 gcccgtgagg cgggcgaagt cgtcatcgcc cttcttgttg agggtgaagt tcacctcgtt
     2221 ggcttcggtc tgggagttgg aggcccggtg ggaatcgatg atgtcggcgc catccacagc
     2281 cacgcggctt tccaggagca cccacttgct gatcttctcc tcgccgggct tggccttgac
     2341 cacgggctgg ccggagcgct tggcctgccg ctcgctctcg atctcgggca gcagttcgaa
     2401 ttcctggggg atctggccct tgaaaaaggc cagggcctcc tccttggagt tgaagtagac
     2461 ctggggcgcc ttggccacca ggcgctgctc caggcggccg ggcgtggcca gcagcgtctt
     2521 gatgcgctcg cgatcgccct cctcgatgcc ggggatctcc accacgatgc ggttgccttc
     2581 ggcgccgctg gcggtgatct cgggttcgag cacgttggcg ggatcgatgt cgcggatgcg
     2641 cttctcgatg acctccaggg cccgcttgtt ggcatcatcc ttcagctgct tctggtagtc
     2701 cggtttctgt gtgaggcggt aggcgtctcc atcagcggca aaggcgtagc ccgagaagaa
     2761 gtccttggcg atcttctcca ccgtggcctt ctggtcggcg cccgcgccct ccacccggag
     2821 ggcgtcgccg tccatccgca ccgtggcggc gggaaggccc ttctccctga gccgggcgaa
     2881 gaggcggtcc ttgttgtcgc gcagatccgc ggcaagggcc tcctggccct ggacttccag
     2941 ctcgaagtgg acgccgcccc ggaggtcgag gcccagcttc accttggaca ggggcgtgaa
     3001 gaagtatccg cagccgaaca gcacggccag gacgatgacg aggcgccaga ggctccgctt
     3061 ggtcacgggg cgctcctcac aagaatgcgg gccggaatgg atccggcccg gaaggtcaga
     3121 aaggtcagtt ctgggtctcg ggttcgttgg ccagcgaggc caccgcggca cgccgggcct
     3181 tgatcacgga accgccgaac ttcagccaga tgtgcttgtc ctcgacgcgg tcgatggtgg
     3241 cgtagaggcc ggaggtcagg acgacctcgt caccggcctt gagcttggac aggcgggctt
     3301 ccatctcctt gcgggccttg ctctgggggc ggatgagcag gaagtagaac atcagggcca
     3361 tgccgccgat gaacacgaac tggatccagg cggggccgcc gccggcggca gcgggctgct
     3421 gaagaagggc gtagatcatt caaggctcct cggtcatcca tccggctcgc gcggactggg
     3481 cgaaggctgg gaagcgtttc tccagcaggg cctgccgcgc ggcgcgggtg agtcccacag
     3541 tgtagctcag gttgtggatc gtgttcagcg tgaagcccag cagctcaccg cagcggaaga
     3601 ggtggtgcag gtaggcccgg ctgaaggttc ggcaggtgta gcagccgcag gccggatcca
     3661 ggggcaggtc cgcctcccgg tggcgggcat tcttgaggtt gagcttgccc cggctggtga
     3721 ggatgcggcc gtgccgggcc tcccggctgg gcagcacgca gtcgaagaga tccaccccct
     3781 gctcgatgcc gaaaagcagg tcctccggcg tgcccacgcc catgaggtag cggggccggc
     3841 cctccggcag ctccttcacg aactctgcca gcacggcatt catctcctcc ttgggctcgc
     3901 ccacgctgag gccgcccacg gcaaagccct ggaagggggt cttcgcatcc agttccatgg
     3961 cctcggccag gtggcgcctc cgcaggtcca ggtgggtgcc gccctggttg atggcgaaga
     4021 ggccctggtg gggctggagg ggcacggccc ggctgcgggc cagccagcgg gtggtgcggg
     4081 ccatgctgag ctcgagcttg gagcgctcca tgcggccggg cgggcattcg tccagggcca
     4141 tgcagatgtc cgaacccagg ttccgctgga tctccaggct gcgctccggg gacaggaact
     4201 gggggctgcc gtccaggtgg ctctggaacg tgaccccgtc ctccgtcatc ttccgcaggg
     4261 aggccaggga gaagacctgg aatccgccgg aatccgtgag gatgggcccc tcccatccca
     4321 tgaaccggtg cagcccccca tgccgggcta ccagggcgtc gccggggcga aggcccaggt
     4381 ggtaggtgtt cccgaggatc acctgggggc cgatgtcccg gagctgggtg ggcgtgatgc
     4441 ccttcaccgt cccctgggtt cccaccggca tgaaggccgg cgtcaggacc tcgccgtgcg
     4501 aggtatgaaa ggctcccgcc cgggcgggac cggacgccaa cccggaagcc tgggtgaatg
     4561 agaaatcggg acttgtgatc tgcggcatgg gagggtccca ctttcttaac aaaaattaac
     4621 aattccaccc tttgggttgc caggtagatg ttgcatcgct cagaaaaaaa ccgcggaatg
     4681 ccctgtccac gaggggttgc gcccgtcatt ccagcttgac catccgcccg ccctttgcca
     4741 tcttagccgt tgggcttgcc ccagttcttt actccatact tcgtagccgg atcgatgttc
     4801 ccgtcggttc ggctcgcagt ttttttcccc atggatcttt cacgggagtc gcatgagcaa
     4861 agatcccaag aaatcagccc ccaccaagac ggcccctccc gttgagaccc tggaggatgc
     4921 cgtctaccgg tcctctctct cggccgggaa cgacgccatc aagcggggta accccaaggt
     4981 caccatcccc acgacggtag ccatgtacgc gctgttcgca ttcgcggcct tccagctggc
     5041 gaagcagacg gaggtcggca agaaggtcat caagaccgtg ggcatcgaac tcgccgagca
     5101 gctcgaggac gccccgccgc ctcctcctcc gcctccgccg ccgccgcctc cgccgccgcc
     5161 gccgatggcc gtatccaccg ccaaggtgga cacgaccccc atcgatccgc gccaggaagt
     5221 ggtgcctgag caggcgccga aagagcttcc gaagcaggat ctctccctcg gcggcgtccc
     5281 cggcggcgtc atcggcggtg tggtcggtgg cgtggtcggc ggcgtggtcg gcggcaccgg
     5341 caaggtggtg gacttcgact tcagccagat caaggtgaag taccagcccc cgcccccccc
     5401 ctaccccccc ctcgccaaga tcgccaaggt ccagggcacg gtggtggtgg agatcgtggt
     5461 cggtcccgat ggcgtgccca cctcggccgt cgcgaaggaa ggacctcccc agctgcggcc
     5521 cacggccgag gcctacgcca tgcagtggaa gttcgagccc gccctcctga acggcgcacc
     5581 ccagtacgcg cgattcaagc tcaccatgcc gttccggctc cggtagcccg cgccccttc
//
LOCUS       DASUDT010000258         4097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_233466, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000258 DASUDT010000000
VERSION     DASUDT010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233466"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /gene="dnaJ"
                     /locus_tag="VFV26_05325"
     CDS             complement(<1..852)
                     /gene="dnaJ"
                     /locus_tag="VFV26_05325"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEX4845619.1"
                     /translation="MKRDYYEVLGVSKEAGADELKKAYRKLAMELHPDRNPGNKEAEE
                     KFKEAAEAYSVLSDPEKRKAYDQFGHAGLGGAGGGGQQFQFDPNQFADFEDILGSFFG
                     GGLFGDLFGGGRRRSGGEERGSDLQYNLKLSFRDAIFGKETVELSIPRLEACGTCQGS
                     GCEAGTRPETCPQCRGAGQVAMRQGFFQMLTPCPRCEGRGRIIPKPCRECRGEGRIHR
                     KTKVSFKVPAGVDRGTRLRLQNQGEAGRFGGRTGDLYVVFDVEADPRYERDGIDLHQR
                     LEVSWPLL"
     gene            complement(892..2757)
                     /gene="dnaK"
                     /locus_tag="VFV26_05330"
     CDS             complement(892..2757)
                     /gene="dnaK"
                     /locus_tag="VFV26_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEX4845620.1"
                     /translation="MAGKLIGIDLGTTNSCVCVMEGGDSRVIPNREGSRTTPSVVAFT
                     DKGDVLVGHIAKRQAVTNPQRTLFAVKRLIGQRFQAPKVQEAVARLPFPVVAAPNGDA
                     WVRVGERDYAPPEVTAIVLRSLKQAAEAFLHEDVTDAVITVPAYFDDAQRQATKDAGK
                     IAGLNVQRIINEPTAAALAYGFNKKGLKQILAIYDFGGGTFDFTLMEMNDGVFEVLAT
                     SGDTFLGGEDIDLAIQIWLVQQFRDKTGIDLSLDRMALQRLKEASEKAKCELSTLDKV
                     EIRLPFIAQGASGPQHLEATLTREQLEDMARSLVDQTLIPIQDALDQGGKTARQVDEV
                     ILVGGQTRMPMVQRLVRDFFGKEPNRSINPDEVVATGASIQGAVLKGDIKDLVLLDVT
                     PLSIGIETQGGGFVKIIQRNATIPTRDARTFTTVTDNQSRVEIHVLQGERELAEHNKS
                     LGRFDLINLPPLPKGVPQIEVAFDIDSNGIVKVSARDLMTGLEQSMSIRPSSGLSELE
                     IQRMIREALANAETDVKKRDALKYIASAEGLIFSCDKSFTECGKYLAEDQQIMIRDVL
                     SRARQAVASQDPDALRGCEGQLLEAQGLLTEAVLAASEAMMASLDGDGDGAAAPN"
     gene            complement(2833..3516)
                     /locus_tag="VFV26_05335"
     CDS             complement(2833..3516)
                     /locus_tag="VFV26_05335"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX4845621.1"
                     /translation="MTTDTPREPHDQPAGEPEDLLDLSLDDSLEGDLQAVADEVASEY
                     PAPAEGEAIPADPAAEPRADLESALTEAEHQMEEMLRREAELMDHHRRLAADFNNFRN
                     RAQRDVALATEQAERKILLEMLPILDNFERGLGATYQDVQSFRSGVELIRKQFLEALR
                     RMNVEPLPLKVGDPFDALHAEALTTFSDPSLPDGAVAAIYEQGFNLKGQLLRAARVVV
                     NRLHDTGKA"
     gene            complement(3551..>4097)
                     /locus_tag="VFV26_05340"
     CDS             complement(3551..>4097)
                     /locus_tag="VFV26_05340"
                     /inference="COORDINATES: protein motif:HMM:NF013768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HEX4845622.1"
                     /translation="LWNYPDTVLTELGNYATDQFAGLTLAEMRARLLEALRAGAQEGE
                     TLRTRLQELASRWPDGGGPGGDPPVLVSGLGRMGGLPEFEDVSRFRGLVAAFEEKGRL
                     ARLLNAFADRASEDIQLLLGSENPYLDGWPLATAVRTVGLGPAGYVTFALVGPLRMDY
                     GRVMGGLRWWSGQIQRRHGRS"
BASE COUNT          599 a         1390 c         1408 g          700 t
ORIGIN      
        1 cagcaggggc caggagacct ccaggcgctg atggaggtcg atgccatcgc gctcgtagcg
       61 gggatccgcc tccacatcga agaccacgta cagatcgccc gtgcggccac cgaagcgccc
      121 cgcctcgccc tggttctgga gccggagccg cgtgccccgg tccacgccgg cgggcacctt
      181 gaagctgacc ttggtcttgc ggtggatgcg gccctcgccc cggcattcgc ggcagggttt
      241 ggggatgatc cggccccggc cctcgcagcg ggggcagggc gtgagcatct ggaagaagcc
      301 ctggcgcatg gccacctggc ccgcgccccg gcactggggg caggtctcgg gccgggtgcc
      361 ggcctcgcag ccggagccct ggcaggtgcc gcaggcctcc aggcggggga tgctgagttc
      421 cacggtctcc ttgccgaaga tcgcatcgcg gaaactcagc ttcaggttgt actgcagatc
      481 cgagccccgc tcctcgcccc cggaccggcg gcgtccgccg ccgaagaggt cgccgaacag
      541 cccgccgccg aagaagctgc cgagaatgtc ctcgaaatcc gcgaactggt tgggatcgaa
      601 ctggaactgc tggccgccgc ccccggcgcc ccccaggccc gcgtggccga actggtcgta
      661 ggccttccgc ttctccggat ccgacagcac gctgtaggcc tccgcggcct ccttgaattt
      721 ctcctccgcc tccttgttcc ccggattgcg gtcggggtgc agttccatgg ccagcttgcg
      781 gtaggccttc ttcagttcat ccgccccggc ctccttggag acaccgagca cttcgtagta
      841 gtcacgcttc atgcaaccat cctggcttcc aggatagccg atgcggtggg cctagttcgg
      901 ggccgccgcg ccgtccccat ccccgtccag ggaggccatc atggcttcgc tggcggccag
      961 gaccgcctcg gtgaggaggc cctgggcctc gagcagctgc ccctcgcagc cccggagggc
     1021 gtcgggatcc tgggaggcca ccgcctgccg ggcccgggag agcacgtcgc ggatcatgat
     1081 ctgctggtcc tcggccaggt atttcccgca ctccgtgaag ctcttgtcgc aggagaagat
     1141 cagcccctcg gccgaggcga tgtacttcag cgcatcgcgc ttcttcacat cggtctcggc
     1201 gttggccagg gcctcgcgga tcatccgctg gatctccagc tcggacaggc ccgagctggg
     1261 ccggatgctc atgctctgtt cgaggccggt catgagatcc cgggcggaga ccttcacgat
     1321 gccgttggag tcgatgtcga aggccacctc gatctggggc acgcccttgg gcaggggcgg
     1381 caggttgatg aggtcgaagc ggcccaggct cttgttgtgc tcggccagct cccgctcgcc
     1441 ctggaggacg tggatctcca cccggctctg gttgtcggtg acggtggtga aggtgcgggc
     1501 atcgcgggtg gggatggtgg cgttccgctg gatgatcttc acgaagccgc cgccctgggt
     1561 ctcgatgccg atggacaggg gcgtgacgtc cagcagcacc aggtccttga tgtcgccctt
     1621 gaggacggcc ccctggatgg aggcgccggt ggccaccacc tcgtcggggt tgatgctgcg
     1681 gttgggctcc ttcccgaaga agtcgcggac cagccgctgc accatgggca tgcgggtctg
     1741 gccgcccacc aggatcacct cgtccacctg ccgggccgtc ttgccgccct ggtccagggc
     1801 atcctgaatg gggatcagcg tctgatccac caggctccgg gccatgtcct cgagctgctc
     1861 ccgggtgagg gtggcttcga gatgctgggg gccgctggcc ccctgcgcga tgaagggaag
     1921 ccggatctcc accttgtcca gggtggacag ctcgcacttg gccttttcgc tggcctcctt
     1981 gagccgctgg agcgccatgc ggtccaggga gaggtcgatg ccggtcttgt cgcggaactg
     2041 ctgcaccagc cagatctgga tggccagatc gatgtcctcg ccgcccagga acgtatcgcc
     2101 gctggtggcc agcacttcga agacgccgtc attcatctcc atcagcgtga agtcgaaggt
     2161 gccgccgccg aagtcgtaga tggccaggat ctgcttgagg cccttcttgt tgaatccgta
     2221 ggccagagcc gcggccgtgg gctcgttgat gatgcgctgg acgttcagcc cggcgatctt
     2281 cccggcatcc ttggtggcct ggcgctgggc gtcgtcgaag taggccggca ccgtgatgac
     2341 cgcatccgtc acatcctcgt ggaggaaggc ctcggccgcc tgtttcagcg aacggaggac
     2401 gatggccgtg acctcgggcg gcgcgtagtc ccgctcgccc acccgcaccc aggcgtcccc
     2461 gttgggggcc gccaccacgg gaaaggggag gcgggccacg gcctcctgca ccttgggggc
     2521 ctggaagcgc tgcccgatga gccgcttcac ggcgaacagg gtgcgctggg gattggtgac
     2581 ggcctgacgc ttggcgatat ggcccaccag cacatcgccc ttgtccgtga aggccacgac
     2641 ggaaggggtg gtgcggctgc cttcgcggtt ggggatcacg cgcgaatccc cgccctccat
     2701 cacgcagacg caactgttgg tcgtgcccag atctatgccg atcagtttgc ctgccatggt
     2761 ggaactccgg gggatcgcgg ctatatgtta agcagatttg aacggggcat ccatggtggg
     2821 cattggagaa ggctaggctt ttcccgtgtc atgaagccgg ttcaccacca cgcgggcggc
     2881 acgcagcagc tggcccttga ggttgaagcc ctgctcatag atggccgcca cggcgccatc
     2941 cggcaggctg gggtcggaga aggtggtgag ggcctccgca tggagggcgt cgaagggatc
     3001 ccccactttg agtggaaggg gctccacatt catgcggcgg agcgcttcca ggaactgctt
     3061 ccggatcagc tcgacgccgg accggaagga ttggacatcc tggtaggtgg cgcccaggcc
     3121 ccgctcgaag ttgtcgagga tggggagcat ctccaggagg atcttccgct ccgcctgctc
     3181 cgtggccagc gccacatccc gctgggcccg gttgcggaaa ttgttgaagt ccgcggccag
     3241 ccgccggtga tgatccatca gctcggcctc gcggcggagc atctcctcca tctggtgctc
     3301 ggcttctgtg agggccgact ccaggtccgc ccggggctcg gccgccgggt ccgcgggaat
     3361 ggcctccccc tccgccgggg cggggtattc cgaggccacc tcgtccgcca cggcctggag
     3421 atcgccttcg agggaatcgt ccaggctgag gtccagcaga tcctcaggct ctccagccgg
     3481 ctggtcgtgg ggctcgcggg gggtatcggt ggtcatcgca gcagtatacg caatccgggc
     3541 aagggacgtc tcagctccgt ccatgccgcc gctggatctg gcccgaccac catcgcaggc
     3601 cgcccatgac ccggccgtag tccatgcgga gcggccccac cagggcgaag gtcacgtagc
     3661 ccgccggacc cagccccacc gtgcgaaccg ccgtggccag gggccagccg tccagatagg
     3721 ggttctcgga gcccaggagg agctggatgt cctccgaggc ccgatcggca aaggcattca
     3781 gcaggcgggc caggcggccc ttctcctcga aggccgccac caggccccgg aagcggctca
     3841 catcctcgaa ttcgggcagc ccccccatgc gccccaggcc ggagaccagc accggcggat
     3901 ccccgcccgg gccgccgcca tcgggccagc gggaggccag ctcctgcagc cgggtgcgga
     3961 gggtctcgcc ctcctgggcc ccggcccgga gagcctccag caggcgcgcg cgcatctccg
     4021 ccagcgtgag gcccgcgaac tggtccgtgg cgtagttccc cagttcggtg agcacggtgt
     4081 cggggtagtt ccagagg
//
LOCUS       DASUDT010000259         2445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_122868, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000259 DASUDT010000000
VERSION     DASUDT010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122868"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="VFV26_05345"
     CDS             complement(<1..1145)
                     /locus_tag="VFV26_05345"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4845623.1"
                     /translation="MTTVPSKAAKPLQVLLVDDNPIQLSLLHHLFQRHGHTTLEAKNG
                     AEALIVLATESPDVVVSDCVMPLLDGYQLCRLLKDDRATRHLPVLLLTAQGAGLARFW
                     AKTCGADRFLVKGRDLDHVVEVAASLVDPTGKPRPHGRPRLAQENFGVDAIQRRLAQA
                     LEQRVVETALRDSIGRLYTAEHDTLRLIQGFIEILQELVLPGALLVAYAGEDGMICHG
                     VHGSSLGEEDRAALEAGVRQLIPAGSPGDCHWHPADDDEDRRRAMRDPVLRVMSAITP
                     GYPTVGVMGFLAERRAVDEYERLFEIAAEELGRLLSLEDSRLRLYHQAIRDPLTGLYN
                     RRHLLDMLDMEIDQCGRFGHSLSLMLIDLDHFKAVNDRFGHAAGDHVL"
     gene            1280..>2445
                     /locus_tag="VFV26_05350"
     CDS             1280..>2445
                     /locus_tag="VFV26_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845624.1"
                     /translation="MDAPLILALGRAWLRERGEVPVDALWASGRALGLRWAGRKAAEG
                     WILLLQPRPEFWLLDTAHPAWIRLQAEATRDSGKLWGPWFSGARLRAVEGDPRERWMG
                     LVFQRRAITGRLETLRLAFQAIPGRAGIRVDGQDVQVPRLGLGSPFPAAPPEPLEDTP
                     PLRRWRERWGVDLDRAVAGEIPEVLEGEGGLLDRHRAWSQARAEALILVPAQAGAERK
                     RQAEAARMERLAQALARDRAKHTAILPLKRQAQSLAAELYRLKGATGEAVLLDGSRIE
                     LPEGASVETAVQGWFGAAKKAERGLARVAELEAELAREQAAWARRMEAEAQGLAPEPS
                     AARQPKGGGPAKAKGAPREKGTKRMQADGKRKDGKGAAFRSVVVDGFEVLIGKG"
BASE COUNT          351 a          800 c          964 g          330 t
ORIGIN      
        1 aggacgtgat cgccggcggc gtggccgaag cggtcattga cggccttgaa gtggtccagg
       61 tcgatgagca tcagggacag gctgtgcccg aagcgcccgc actggtcgat ctccatgtcc
      121 agcatgtcga ggaggtgccg ccggttgtag agcccggtga ggggatcgcg gatggcctgg
      181 tggtagaggc ggaggcggga gtcctccagg ctgagcaggc gccccagctc ttcggcggcg
      241 atctcgaaca gccgctcgta ctcgtccacg gcgcggcgct cggccaggaa gcccatgacg
      301 cccacggtgg ggtagcccgg cgtgatggcg gacatgaccc ggagcaccgg gtcccgcatg
      361 gctcggcggc gatcctcgtc gtcgtcggcc gggtgccagt ggcagtcccc cggggaaccg
      421 gcggggatca actgccggac gccggcttcg agggccgccc ggtcctcctc gccgagggag
      481 gagccatgca ccccgtggca gatcatgccg tcctcgcccg cgtaggccac gaggagggca
      541 ccgggcagca ccagctcctg gaggatctcg atgaagccct ggatgaggcg cagcgtgtcg
      601 tgctcggcgg tgtagaggcg gccgatggaa tcgcgcaggg ccgtttccac cacccgctgc
      661 tccagggcct gggccaggcg gcgctggatg gcatccacgc cgaagttctc ctgggccagc
      721 cggggcctgc cgtgggggcg gggcttgccc gtgggatcca ccagggaggc ggccacttcc
      781 accacatgat ccaggtcccg tcccttcacg aggaagcggt ccgccccgca ggtcttggcc
      841 cagaagcgcg ccaggccggc cccctgggcc gtgagcagga gcacgggcag gtgccgggtg
      901 gcccggtcgt ccttcagcag gcggcagagc tgatagccgt cgagcagggg catgacacaa
      961 tcgctcacca ccacgtccgg gctttcggtg gcgagcacga tgagggcttc ggcgccgttc
     1021 ttggcctcga gggtggtgtg cccgtggcgc tggaagaggt ggtgcaggag gctcagctgg
     1081 atgggattgt cgtccaccag gaggacctgg aggggcttgg ctgctttgga gggaaccgtc
     1141 gtcatagctt ccagtatcga tgaaagctgc cttcaaggtg aactctgcag aaggatggct
     1201 ccggtccagc cgtgggatgc tgggggcggg ggaggcccag catgcccatg gccagcagga
     1261 aacgcccgga ggcccgtctg tggacgcgcc cctgatcctg gccctgggcc gggcatggct
     1321 ccgggagcgc ggggaggtcc ccgtggatgc cctgtgggcc tcgggccggg ccctgggcct
     1381 gcgctgggcc gggcgcaagg ccgccgaagg ctggatcctg ctgcttcagc cgaggcccga
     1441 gttctggctg ctggacaccg cccatcccgc ctggatccgc ctccaggccg aggccacccg
     1501 ggacagcggc aagctctggg gcccctggtt ctccggggcg cgcctccggg cggtcgaagg
     1561 ggatccccgt gagcgctgga tgggcctcgt gttccagcgg cgggccatca cgggccgcct
     1621 ggagaccctg cggctggcct tccaggccat ccccggccgg gcgggcatcc gcgtggacgg
     1681 ccaggacgtg caggtccccc gtctggggtt gggttcgccc tttcccgcgg ctccgcccga
     1741 gcccctggag gacacccccc ccctccgccg gtggcgggaa cgctggggcg tcgacctgga
     1801 ccgggccgtg gccggggaga tccccgaggt gctggagggt gaaggcggcc tgctggaccg
     1861 gcaccgcgcc tggtcccagg cccgggcgga ggctctcatc ctcgtgccgg cccaggccgg
     1921 ggcggagcgg aaacggcagg cggaggcggc ccgcatggag cgtctggccc aggccctggc
     1981 ccgggaccgg gcgaagcaca cggccatcct gcctctgaag cgccaggccc agagcctcgc
     2041 ggcggaactg taccgcctga agggtgccac cggcgaggcg gtgctgctgg acggcagccg
     2101 gatcgagctt cccgaggggg cctcggtgga aaccgccgtg cagggctggt tcggcgcggc
     2161 gaagaaggcc gaacgcggtc tggcgcgggt ggccgaactg gaggcggaac tggcccgcga
     2221 acaggcggcc tgggccaggc gcatggaagc cgaggcccag gggcttgcgc cggagccgtc
     2281 cgccgcgcga caaccaaagg ggggcggccc ggcgaaggcg aagggcgcgc ccagggagaa
     2341 ggggacgaag cggatgcagg cagacggcaa gcgcaaggat gggaagggcg cggccttccg
     2401 cagcgtggtg gtggacggct tcgaggtgct catcggcaag ggcga
//
LOCUS       DASUDT010000260         3275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_277801, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000260 DASUDT010000000
VERSION     DASUDT010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277801"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VFV26_05355"
     CDS             <1..261
                     /locus_tag="VFV26_05355"
                     /inference="COORDINATES: protein motif:HMM:NF018387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
                     /protein_id="HEX4845625.1"
                     /translation="RLQPDHAMAFVRPDVDGAPMLLYHTGPEGSGATRQPGDIRRARL
                     DDLLHHPEPDFRPLPENPAFLGLYRWRLLADGPSESSLLPRS"
     gene            263..>3275
                     /locus_tag="VFV26_05360"
     CDS             263..>3275
                     /locus_tag="VFV26_05360"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HEX4845626.1"
                     /translation="MRWFRPLLTLLLPAILLLPTTGTAQKRAAEAPWREGGWTGAFAT
                     LRPTLPGKPGLLEAAGPIPTEARIRIYRVEEPEAFLKKVLLDRGRAAAEGGRAAQDPL
                     DVLREAVLWGGRRAFVTVHRTATQGLRDAARQTDRLTSARTPSAPVREGSALPLEGQP
                     GITFVTEIVPKASEDIAGKKGHEEDESGDDGFTSRVQLPAQAAGLYLVEVLRGSAAAY
                     VPWVVTDLALLSEQDGAKLRVQAVDGRDGAPKAGVSGQIIEGTKASPLAFDGAGVAEA
                     SVTPGVRRVVMARSGGSFALLASEGQSVAAVRQRLYAFTERPLYRPGQEVFAKAILRR
                     VEEGENRVVSESASLAFTVLDPEDTKVSEGQAKLLNAETGTYAAQFTLPGAGRLGLYR
                     MVFQGPQGPGQAEFKVEQFVKPAFEVKVTAEKTKVGLGDALTFQASARYFYGAAVRGA
                     KADWFLYKVVPPKSRWIWDDEDAGPAPELMESGQLELDDEGQADLPTFKAESDGLWRM
                     VVKVADASGQRNSGQAQVRAAAGDMVLMIAADRQVALPGKPFQVTARALDLDGKDVPG
                     VAIALRAARIVAQKDHAYWWSRPNALKPGETVASAQGPQAMLTIPEGGAFLLVAEARD
                     SKGRPVTAQRQITVAAEGTPLPAVPDLRAAADKPEYQPGDTARVLVQLPRPKLTLHWA
                     IEHEGLGQRQSRTVPGTTALVEIPVTAAMQPNVWAVFEIVAEGRRQLVEVPIRVPKRD
                     RRLSVSVTTDRERYQPGQPMKVSVEVKDASGKPSAADLSVGVVDEAIYALSQELHPDP
                     VRFFHPTRRHGVLRSGSTDWSFHDLLRRQRPVWSLKQTKRGDFKADDDGKVRQNFKDT
                     AHWAPFVAAGRDGRASVDLTLPDNLTAWRATATAITGDTKVGVGRSSKPASKPLQVAL
                     TLPRTLSVGEEARAIALVRNLSGQPIQGTVRLEVQNGRFSGAPEASFSLQDQGEYRFA
                     LPLFSDKTGPLTVTARVEGGGLKDAERQRVTV"
BASE COUNT          493 a         1211 c         1139 g          432 t
ORIGIN      
        1 cgcctccagc ctgaccacgc catggccttt gtccgccccg acgtggacgg ggcgcccatg
       61 ctgctctacc acacgggccc cgaaggcagc ggcgcgaccc gccagcccgg agacatccgc
      121 cgcgcgcgcc tcgacgacct gctgcaccat cccgaacccg acttccgtcc cctccctgaa
      181 aatccggcct tcctggggct ctaccgctgg cgcctgctgg cggacgggcc ttccgaatcg
      241 tctctccttc ccaggtcctg acatgcgctg gttccgcccg ctcctcaccc tgctgctgcc
      301 cgcgatcctg ctgctgccca ccacgggcac ggcccagaag cgcgctgccg aagccccctg
      361 gcgggagggc ggctggaccg gcgccttcgc caccctgcgc cccaccctgc ccgggaagcc
      421 cggcctgctc gaagccgcgg gccccatccc cacggaggcc cgcatccgca tctaccgtgt
      481 ggaggagccc gaagccttcc tgaagaaggt gctgctggac cgtggccgcg ctgctgccga
      541 gggcgggcgc gcagcccagg atcccctcga tgtgctgcgg gaggcggtgc tctggggtgg
      601 ccgccgggcc ttcgtgacgg tccatcgcac ggccacccag gggctgaggg acgcggccag
      661 gcagacagac cggctgacgt ccgcgagaac gccttcggcg ccggtgcggg agggttccgc
      721 ccttcccctg gagggccagc cgggcatcac cttcgtgacc gagatcgtgc ccaaggccag
      781 cgaggacatc gccgggaaga aggggcatga ggaggacgag tccggcgacg acggcttcac
      841 cagccgggtg cagctcccgg cccaggcggc gggcctctac ctggtggaag tgctgcgggg
      901 cagcgccgcg gcctacgtgc cctgggtggt cacggacctg gccctgctgt cggagcagga
      961 tggggcgaag ctccgcgtgc aggccgtgga cggacgcgat ggcgcaccca aggccggcgt
     1021 gtccggccag atcatcgaag gcaccaaggc gagccccctg gccttcgatg gcgcgggcgt
     1081 ggccgaggcc tccgtcacgc cgggcgtgcg ccgggtggtg atggcccgca gcggcggaag
     1141 tttcgccctt ctcgccagcg aaggccagag cgtcgcggcc gtgcgccagc gcctctacgc
     1201 cttcacggaa cggcccctct accgccccgg ccaggaggtc ttcgccaagg ccatcctgcg
     1261 gcgcgtggag gaaggcgaga accgcgtggt cagcgagtcg gcaagcctcg ccttcacggt
     1321 cctcgatccc gaggatacga aggtgtccga aggccaggcg aagctgctga acgccgagac
     1381 cggcacttat gcggcccagt tcaccctgcc gggcgcgggg cgcctgggcc tctaccgcat
     1441 ggtgttccag ggcccccagg gacctggcca ggccgaattc aaggtcgagc agttcgtgaa
     1501 gccggctttc gaggtgaagg tcacggccga gaagaccaag gtgggcctgg gtgatgccct
     1561 cacctttcag gccagtgccc gctatttcta cggcgcggct gtccgcggcg ccaaggcgga
     1621 ctggttcctc tacaaggtcg tgccgcccaa gtcccgctgg atctgggatg acgaggacgc
     1681 cggtcccgcg cccgaattga tggaaagcgg ccagctcgaa ctggacgacg agggccaggc
     1741 cgatctgccc accttcaagg ccgaaagcga cggcctctgg cgcatggtgg tgaaggtcgc
     1801 cgacgcctcg ggccagcgca acagcggcca ggcccaggtg cgcgccgccg cgggcgacat
     1861 ggtgctgatg atcgccgcgg accgccaggt ggcgctgccc ggcaagccct tccaggtgac
     1921 ggcccgcgcc ctggacctgg atggcaagga cgtcccaggc gtggccatcg ccctgcgcgc
     1981 cgcccgcatc gtggcccaga aggatcacgc ctactggtgg tcgcggccca atgcgctgaa
     2041 gcccggcgag accgtggctt cggcccaggg cccccaggcc atgctgacca ttcccgaagg
     2101 cggcgccttc ctgctggtgg ccgaggcccg ggattcgaag gggcgccccg tgacggccca
     2161 gcggcagatc accgtcgccg ccgaaggcac gcccctgccg gcagtgcccg atcttcgcgc
     2221 cgccgcggac aagcccgagt accagccggg cgacacggcc cgcgtcctgg tccagctgcc
     2281 ccggccgaag ctgaccctgc actgggccat cgagcacgaa ggcctgggcc agcgccagag
     2341 ccgcaccgtg ccgggcacca cggccctggt ggagatcccc gtcaccgcgg ccatgcagcc
     2401 caatgtctgg gccgtcttcg agatcgtggc cgaaggccgc cgccagctgg tggaggtgcc
     2461 catccgcgtg ccgaaacggg accggcgcct gtcggtgtcc gtcaccacgg acagggagcg
     2521 ctaccagccg ggccagccca tgaaggtgtc cgtggaggtg aaggacgctt ccggaaaacc
     2581 ctccgccgcg gacctcagcg tgggcgtcgt ggatgaggcc atctacgccc tgagccagga
     2641 actgcacccg gaccccgtgc gcttcttcca tcccacgcgc cgccacggcg tgctgcggtc
     2701 gggctccacg gactggagct tccacgacct gctgcgccgc cagaggcccg tgtggagcct
     2761 caagcagacg aagcgcggcg acttcaaggc cgatgacgac ggcaaggtgc gccagaactt
     2821 caaggacacg gcccactggg cgcccttcgt ggccgcgggc cgggacggcc gggccagcgt
     2881 ggacctgacg ctgccggaca acctcacggc ctggcgtgcc acggccacgg ccatcaccgg
     2941 cgacaccaag gtgggcgtgg gccgcagttc gaagccggcc tccaagcccc tgcaggtggc
     3001 cctcaccctg ccgcgcaccc tgagcgtggg cgaagaggcc cgggccatcg ccctggtgcg
     3061 caacctctcc ggccagccca tccaggggac ggtccgcctg gaggtccaga acggccgctt
     3121 ctcgggcgcg cccgaggcca gcttcagcct gcaggaccag ggcgagtacc gcttcgccct
     3181 gccgctgttc tccgacaaga ccggcccgct caccgtcacg gcccgggtgg aaggcggcgg
     3241 cctgaaggat gccgagcggc agcgcgtcac ggtgc
//
LOCUS       DASUDT010000261         3284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1515067, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000261 DASUDT010000000
VERSION     DASUDT010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515067"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..643)
                     /locus_tag="VFV26_05365"
     CDS             complement(26..643)
                     /locus_tag="VFV26_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845627.1"
                     /translation="MLQWSPEAALVDHAWGLETGGRSLALGYLAGTVAALWLLNQARR
                     SFWLFSLLALPGTLCHELCHWTLGHLLNGRPVGFTVLPRREGRGWVLGAVALANLRWY
                     NAFFIGLAPLLLLPAAYGLFRWRLGQHPAFGWVEAGTVYLLANLVFGALPSWQDLRIA
                     ARSPIGWLLLAGALGWVWMRVGKDESPGPPSTLRSAVRPWPVQGP"
     gene            complement(907..1620)
                     /locus_tag="VFV26_05370"
     CDS             complement(907..1620)
                     /locus_tag="VFV26_05370"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX4845628.1"
                     /translation="MNLFDAPTGAQTAVVDAALTSRRSMRAFLSTPVPRETVEAILRV
                     ASRAPSGTNTQPWQVHVLTGAARDRLCNRIGAIYEDPAELARHEREYDYYPKAWTSPY
                     LDRRRKVGWDLYGLLGLAKTDKEGMHRQHGRNFRFFDAPVGLIFSIDRGMALGSWLDY
                     GMFLQAIMVAARARGLHTCPQAAFTQFHRVIAEELAFRPDQMLVCGMALGYADPAAVE
                     NSLVTERAGVSEFARFLEA"
     gene            complement(1644..2297)
                     /locus_tag="VFV26_05375"
     CDS             complement(1644..2297)
                     /locus_tag="VFV26_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase family protein"
                     /protein_id="HEX4845629.1"
                     /translation="MRFIFEQLRVGGDRNFGYLLGDREAGVGLLIDPSYTPEAAVERA
                     RAQGLKITHILNTHGHADHANGNEGAKALTGALVAGGPGHPGPVDLTLRDGDRVPFGA
                     YALRVWHVPGHCPDHLAFLVEGQDAGLTGDLLFVGKVGGTQTEADGRTEWESLQRLLR
                     DWPPHTTLWPGHDYGARPSSTLAWERRTNPFLLCPDVEAFLKAKGEWAGFKAKHGLR"
     gene            2393..>3284
                     /gene="msrB"
                     /locus_tag="VFV26_05380"
     CDS             2393..>3284
                     /gene="msrB"
                     /locus_tag="VFV26_05380"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX4845630.1"
                     /translation="MRKRSIWLAVAAAVALAGAALALPHQAPQKPSPHEVKVNAPDKP
                     SPAVLKQKLTPMQYHVTQEAGTEPPFQNAFWNEHRDGIYVDLVSGKPLFSSKDKYDSG
                     CGWPSFTRPLAADEVVENRDLSHGMVRTEVRSKGADSHLGHVFDDGPRDQGGLRYCIN
                     SAALRFVPVDDLEKEGLGRFLPLFGRAAKAVPAPSEEVATLAGGCFWGMEDLIRRQPG
                     VTGTEVGYTGGTVANATYEHHDGHAEAVQIRFDPTKTSFEALLRFFFRMHDPTTLNRQ
                     GNDVGPSYRSAIFFPSEAQRQ"
BASE COUNT          537 a         1173 c         1130 g          444 t
ORIGIN      
        1 aaggccgaat ccaaggtccg cagggtcatg ggccttggac cggccaaggc cgcacggcgg
       61 aacggagggt ggacgggggg ccgggagatt cgtccttccc gaccctcatc cacacccacc
      121 ccagggcccc cgccagcagc agccagccga tgggcgagcg ggcggcgatg cggaggtcct
      181 gccaggaagg cagtgcgccg aagaccaggt tcgccaggag gtacacggtg ccggcctcga
      241 cccagccgaa ggccgggtgc tgcccgagcc gccaccggaa caggccgtag gcggcgggca
      301 gcagcaggag cggcgccaga ccgatgaaga aggcgttgta ccagcgcagg ttcgccaggg
      361 ccacggcccc cagcacccag ccgcggcctt cgcgcctcgg cagcaccgtg aagcccacgg
      421 ggcggccgtt gagcaggtgg cccagggtcc agtggcagag ttcgtggcag agggttccgg
      481 gcagggccag cagggagaac agccagaagg accgccgtgc ctggttcagc agccacagcg
      541 ccgccaccgt tcccgccagg tagcccagtg ccaggctgcg ccctcccgtt tccagtcccc
      601 aggcatgatc cacgagcgcc gcctccgggc tccattggag catcccccgg cgggacgctt
      661 ctattcctca ggaacaccag gtcgcgttca aaaaaatcca ccacggagac actgaggcca
      721 cggaggggaa cggagatctc cgtgaccctc catcatgggc aggccggagg ccgcttccgg
      781 ccatgccgga agccacggga ggcgccggtt ccggatgccc caagaaggat ccggaaccag
      841 cgcctcccgt gtgcccatgc tccgtgcctc cgtggtggat ccataacgat cggaagccaa
      901 ccggcatcag gcctcgagga acctcgcgaa ttcggacacc ccggcccgct cggtcacgag
      961 gctgttctcc accgccgccg gatcggcgta gccgagggcc atgccgcaca ccagcatctg
     1021 gtccgggcgg aaggccagct cctcggcgat gacgcggtgg aactgggtga aggcggcctg
     1081 ggggcaggtg tgcaggcccc gggcgcgggc cgccaccatg atggcctgca ggaacatgcc
     1141 gtagtccagc cagctgccca gcgccatccc gcggtcgatg ctgaagatca ggcccacggg
     1201 cgcgtcgaag aaccggaagt tgcggccatg ctgccggtgc atgccctcct tgtcggtctt
     1261 ggcgaggccc aggaggccgt acagatccca gcccaccttg cggcggcggt cgaggtaggg
     1321 cgaggtccat gccttcgggt agtagtcgta ctcccgctca tgccgggcca gttcggcggg
     1381 gtcctcgtag atggcgccga tgcggttgca gagccggtcg cgggccgccc ccgtcagcac
     1441 gtggacctgc cagggctggg tgttggtgcc cgagggcgcc cgcgaggcca ccctcaggat
     1501 ggcctccacg gtctcgcggg gcacgggcgt cgacaggaag gcgcgcatgg agcggcggct
     1561 ggtgagggcg gcatccacca cggcggtctg cgccccggtg ggtgcatcga acagattcat
     1621 gaggtcggtc ctttcgggaa ggctcatctc agcccgtgct tcgccttgaa ccccgcccac
     1681 tcacccttgg ccttcaggaa agcctccaca tcggggcaga gcaggaaggg gttggtgcgc
     1741 cgttcccatg cgagggtgga gctgggacgg gcaccgtagt cgtggccggg ccagagggtg
     1801 gtgtggggcg gccagtcccg cagcaggcgc tggaggctct cccattcggt gcggccatcg
     1861 gcctcggtct gggtgccgcc caccttgccc acaaagagca ggtcgccggt gaggcccgcg
     1921 tcctggccct ccaccaggaa ggccaggtgg tccgggcagt ggccggggac atgccagacg
     1981 cgaagggcat aggcgccgaa gggcacgcgg tccccgtccc tcagcgtgag atccaccgga
     2041 cccggatgcc cggggccgcc cgccaccagg gccccggtca gggccttcgc cccttcgttg
     2101 ccgttggcgt ggtccgcgtg gccatgggtg ttgaggatgt gggtgatttt cagcccctgg
     2161 gcccgggccc gctccaccgc ggcctcgggg gtgtaggacg ggtcgatgag caggcccacg
     2221 cccgcctccc ggtcccccag gaggtagccg aagttgcgat cgccccccac ccggagctgc
     2281 tcgaagatga accgcatggg accctcccgg ctgccattgt cccccatcgc cccccaagcc
     2341 gcaggaacgc cgccgccccc atcggcatcc aacggagcac ctggaggggc ccatgcggaa
     2401 gcggagcatc tggcttgcgg tggccgcggc cgtggccttg gcgggcgccg ccctggccct
     2461 gccccaccag gccccccaga agccatcccc acacgaggtg aaggtgaacg cccccgacaa
     2521 gcccagcccc gccgtgctca agcagaagct gacgcccatg cagtaccacg tcacccagga
     2581 ggcgggcacg gagcccccct tccagaacgc cttctggaac gagcaccggg acgggatcta
     2641 cgtggacctg gtgagcggca agccgctgtt ctcctccaag gacaaatacg attccggctg
     2701 cggctggccc agcttcacca gacccctggc cgccgatgaa gtcgtggaga accgggacct
     2761 gtcccacggc atggtccgca cggaggtgcg gtccaagggg gccgattccc acctgggcca
     2821 tgtcttcgat gacggcccgc gggaccaggg tggcctgcgc tactgcatca actccgccgc
     2881 cctgcgcttc gtgcccgtgg acgacctcga gaaggagggc ctgggccgct tcctgcccct
     2941 gttcggccgc gccgccaagg ccgtgcccgc gccgtccgaa gaagtcgcca ccctggcggg
     3001 cggctgcttc tggggcatgg aggatctgat ccgcaggcag cccggcgtga ccggcacaga
     3061 ggtgggctac accggaggca ccgtggcgaa tgccacctac gagcaccacg acggccacgc
     3121 cgaggccgtg cagatccgct tcgaccccac gaagaccagc ttcgaggccc tgctccgctt
     3181 cttcttccgc atgcacgacc ccaccaccct caatcgccag ggcaacgacg tgggcccctc
     3241 gtaccgcagc gccatcttct tccccagcga ggcccagcgg caga
//
LOCUS       DASUDT010000262         3894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1780200, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000262 DASUDT010000000
VERSION     DASUDT010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3894
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780200"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..1353)
                     /locus_tag="VFV26_05385"
     CDS             complement(130..1353)
                     /locus_tag="VFV26_05385"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845631.1"
                     /translation="MHPVQIPGSKSVTNRALLLAALAPGQSRLRGGLEAEDTRWMRQA
                     LGDLGLGFAEAEGTWIIDGGRRPRAAKPLWLGASGTTLRFLLPWLALKAEAPLRLEGD
                     SRLFERPLGPLLAPLRALGAAWESDATGAWLRPVAPPPDQLDLVVDARLSSQFLTGLA
                     LAAASLPHGGVLNWTESASPSYLTLTTQWLQRFGCDARLEPGRWTIPGGSLAPQALEL
                     PGDWSGAAAFLAAAAATGRPLTIAPLDSRDAQGDRAMVAILEAAGCRSRWIAPQTLEL
                     AGPLRQGLDADLSDCPDLGPVLAAVAALAPGPSELRGLHTLPLKECDRLEASADLVRW
                     LGGEALVIGNHTLRVKPGPAPGPRGAFDPRNDHRMAFAAAVGGLRHGGDLRDPHCVAK
                     TFPHFWSVWRGMLGC"
     gene            complement(1453..1842)
                     /locus_tag="VFV26_05390"
     CDS             complement(1453..1842)
                     /locus_tag="VFV26_05390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845632.1"
                     /translation="MKHQRGEGKIGCIVSLLVFGALAAAGYKAVPVYYSDSELVDACD
                     FIASGAAKKPIETIEREIRDKAKELAIPEVLMDKNAIHVTKAGTGEAGTCTIVLRYKR
                     TIDFYGTYQWTKETNKRISKPIFENIG"
     gene            complement(1856..>3894)
                     /locus_tag="VFV26_05395"
     CDS             complement(1856..>3894)
                     /locus_tag="VFV26_05395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845633.1"
                     /translation="DMRLRRFLPFALLLGLSLGAQDPALKDAFLQGKALWATQGDREG
                     ASARFEKVVEALAPKTASLGPEWIQVLSESYNWLAVLDDRHAQGKPRVQGRLQALIDL
                     NPDFEVDRTLTSQRLATLFDRLKAEKYAPVKLSYEPEGGILSVDGRTCAPLPRKFLPF
                     GTRKLRYSRPGFAPVELSLEIAPREAKSADFKLARTSSTVTLHVQPSGAEILLDGQSL
                     GQAKGQAGPEALALAVPLGLRPEELSEAFVIADLAPGKHQLELRAPCFRPKTLLLDEA
                     LATPWADHLLEPIRLEPSKGTLSVSSPWPGGELFLSGQSQGPLPVAQLPVCSGPYDLL
                     VRFPGGGFSQRLTVEDGKTLTLEVRPKPRLACLGLEGDTDFTGRARFQGLLDSFGDRL
                     QKVVYLSPRPGETPRQALARVKASREAELILLATPLPDKVIHRIELLVATLDGEEERL
                     VVKPLEQDPLGDLAARLNAVPPIHEPGLGLSLLDVPGEPGPWVLSASEAAQKAGIQPG
                     KAITQVNGKALASTRELRLAIAAAKGPVALSQGGAPVALPVLTEALEIPLSAPELCYP
                     SVLAHLRLLYAGARGDEASLARLNLGLALMHFRKYDKAIDLLRDARISRASGVSQGTL
                     DYHMGLCFLRLGSAYQAEAAQAFRQAMKYPQATLLGPDGPLVAPLARQALEDLK"
BASE COUNT          557 a         1271 c         1505 g          561 t
ORIGIN      
        1 gccaccggcc ctcgcgtcca cccagcagcc aggcctgggc gagggcggcc agggcccagg
       61 gagggtcccc ccagcgccga ccccggtcca ggccccaggg ggccttccag tggccgagcc
      121 aggcggccct cagcacccca gcatcccgcg ccagacgctc cagaagtggg ggaaggtctt
      181 ggccacgcag tggggatcgc ggaggtctcc gccatggcgc agccccccca cggcggcggc
      241 gaaggccatg cggtggtcgt tccggggatc gaaggccccg cgggggcctg gagcggggcc
      301 cggcttcacg cgcagggtgt ggttcccgat gacgagggcc tcgcccccga gccagcggac
      361 caggtccgcc gaggcctcca gccggtcgca ttccttcagg ggcagggtgt gcaggccccg
      421 gagctccgag ggccccggag ccaacgccgc cacggccgcc agcaccgggc ccaggtcggg
      481 gcagtccgag aggtcggcat ccaggccctg ccgaaggggg cccgccagtt cgagggtctg
      541 gggggcgatc cagcgggagc ggcatcccgc ggcctcgagg atggccacca tggcgcggtc
      601 cccctgggca tcccgggagt ccaggggggc gatggtcagc gggcggcccg tggcggcggc
      661 agcggccagg aaggcggcgg cgccgctcca gtcgccgggc agttcgaggg cctgcggtgc
      721 cagggatccg cccgggatgg tccaccggcc cggctccagg cgggcgtcgc aaccgaagcg
      781 ctggagccat tgggtggtga gggtcaggta gctggggctg gcggactcgg tccagttcag
      841 cacgccgcca tggggcaggc tggcggcggc gagggccagg cccgtgagga actggctgct
      901 gaggcgggca tccaccacca ggtccagctg gtccggtggc ggggccacgg ggcgcagcca
      961 ggcgccggtg gcatcagatt cccaggccgc tccaagcgcc ctcaggggcg ccagcagggg
     1021 gcccagggga cgctcgaaga gccgggaatc gccctccagc cggaggggcg cctcggcttt
     1081 cagggccagc cagggcagga ggaagcgcag ggtggtgccg gaagcgccca accagagcgg
     1141 cttggcggca cgggggcgcc ggcccccatc gatgatccag gtgccctcgg cttccgcgaa
     1201 acccagcccc agatcgccca gggcctgccg catccagcgg gtatcctcgg cctccagccc
     1261 gccccggagg cggctttggc ccggcgccag ggccgccagc agcagggccc ggttggtgac
     1321 ggatttcgag ccgggtattt ggacaggatg caaggcctcc cccgggggga gggaactgtc
     1381 ttctggaagt gacaggagca tatggcaggg tgccgtggcg gcccgcctgc cgcaagccac
     1441 caagtgcccg attcagccga tgttctcgaa gatgggcttg gagatgcgct tgttcgtttc
     1501 cttggtccac tggtaggtgc cgtagaagtc gatggtgcgc ttgtaccgga ggacgatggt
     1561 gcaggtgccg gcctcgccgg tgccggcctt ggtcacgtgg atggcgttct tgtccatcag
     1621 gacctcgggg atggccagtt ccttggcctt gtcccggatt tcccgctcga tggtctcgat
     1681 gggtttcttc gcggcgccgc tggcgatgaa atcgcaggcg tccaccagtt cgctgtcgct
     1741 gtagtagacg ggaaccgcct tgtagcccgc ggcggccagg gcgccgaaca cgagcaggga
     1801 gacgatgcag ccgatcttgc cttcaccgcg ctggtgcttc atggatgcct cctcattact
     1861 tcaggtcttc gagggcctgc cgggccaggg gtgccaccag gggaccatcg ggaccgagca
     1921 gggttgcctg aggatacttc atggcctggc ggaatgcctg cgcggcttcg gcctggtagg
     1981 cgctgcccag gcggaggaag cagagcccca tgtggtagtc cagggtgccc tggctcacgc
     2041 cgctcgcgcg gctgatccgg gcgtcccgca gcagatcgat ggccttgtcg tacttgcgga
     2101 agtgcatgag ggcgaggccc aggttcagcc gggcgaggct ggcctcgtcg cccctggctc
     2161 cggcgtacag caggcgcagg tgggccagca cgctgggata gcagagttcc ggggcgctca
     2221 gggggatctc cagggcctcg gtcagcacgg gcagggccac cggggcgccg ccctggctga
     2281 gggccacggg gcccttggcg gctgcgatcg ccaggcgcag ctcccgggtg gaggccaggg
     2341 ccttgccgtt gacctgggtg atggccttcc cgggctggat gccggccttc tgggcggctt
     2401 cggaagccga cagcacccag gggccgggtt cgcccgggac atccaggagc gataatccga
     2461 ggcccggttc gtggatgggg ggcaccgcat tgaggcgcgc cgcgaggtcc cccaggggat
     2521 cctgctccag gggcttcacc accaggcgct cctcctcgcc atcaagggtg gccaccagca
     2581 gttcgatccg gtggatgacc ttgtccggga ggggcgtcgc caggaggatg agctccgcct
     2641 cccgggaggc cttcacccgg gcgagggcct gcctgggggt ttcgccgggc cgcggggaca
     2701 ggtagaccac cttctggagc cggtctccga agctgtccag caggccctgg aaccgggccc
     2761 ggcccgtgaa gtcggtgtcg ccctccaggc ccaggcaggc gaggcggggt ttgggacgga
     2821 cctccagcgt cagcgtcttg ccgtcttcca cggtgagacg ctgggagaag ccgccgcccg
     2881 gaaaccgcac cagcagatca tagggcccgg agcagaccgg cagctgggcc acggggaggg
     2941 ggccctggct ctggcccgaa aggaagagtt cgccgccggg ccagggggag ctgaccgaca
     3001 gggtcccctt ggagggttcc aggcggatgg gctccagcag gtgatcggcc cagggcgtgg
     3061 ccagggcctc atccagcagc agggtcttgg ggcggaagca gggcgcccgc agctcaagct
     3121 ggtgcttgcc cggggcgaga tccgcgatga cgaaggcttc ggaaagctct tcggggcgga
     3181 ggcccagggg caccgccagc gccagggcct cgggtcccgc ctggcccttg gcctggccca
     3241 gactctgtcc atccagcagg atctccgcgc cgctgggctg gacgtggagg gtgacggtgg
     3301 aggaggtgcg ggcgagcttg aagtccgcgg atttcgcctc ccggggggcg atctccaggc
     3361 tcagttccac gggggcgaag cccggccggc tgtaccggag cttccgggtg ccgaagggga
     3421 ggaacttgcg ggggagcggg gcgcaggtcc ggccgtccac gctcaggatg ccgccttcag
     3481 gttcgtagct gagcttcacc ggcgcgtact tctccgcctt cagccggtcg aagagggtcg
     3541 ccaggcgctg ggaggtcagg gtgcggtcca cctcgaaatc cggattcaga tcgatgaggg
     3601 cctgcagccg gccctggacc cggggcttgc cctgggcatg ccggtcatcg agcaccgcca
     3661 gccagttgta gctttcggaa aggacctgga tccattcggg tccgagcgag gctgttttcg
     3721 gtgcgagggc ctcgaccacc ttttcgaagc gggccgaggc gccttcgcgg tccccctggg
     3781 tggcccacag ggccttgccc tggaggaagg cgtccttgag ggcgggatcc tgggccccga
     3841 ggctgaggcc gagcaggagg gcgaagggga ggaatcggcg gaggcgcatg tcag
//
LOCUS       DASUDT010000263         2672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_13152, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000263 DASUDT010000000
VERSION     DASUDT010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13152"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1572)
                     /locus_tag="VFV26_05400"
     CDS             complement(46..1572)
                     /locus_tag="VFV26_05400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEX4845634.1"
                     /translation="MEVRKSLVVNSTPLETRIALLENGQLCELFLERTMNKSQVGDVY
                     KGRVAKLLPGMQSAFVGIGGAKDGFLYLDDPVSQRLGADLSSEEEGEEAGEDLPPPPP
                     PLPPLKEGEETLVQVVKDPIGSKGPRLSRHLSFPGRFLVFMPGIDHIGISRKITDPEE
                     RDRLRELIRSHAQPGEGFIVRTAAIGEKDEDLVGDVAFLRQMWQEIQAKAATVPAPGL
                     VWQDLRLLQKVLRDIFREEVSTFWVDDAEAHRQVLAFVEKLHPEWANRVKHFTSDLPI
                     FEAFGIESEIDSARQPKVFLKHGGSIVLNQTEALVSVDVNTGKFVGKKDLEETVYLTN
                     LEAIPEIVRQLRLRNLGGIVVIDFIDMVDPAHRDEVLARLQEELKRDRNHARAGGISE
                     FGLVELTRKRTGPSLERLLTTPCPACNGAGRLQSPETSLLKAYRELVRLGERLRGADI
                     RLNIHPDLSGALHQEAREGLLQLARLLGARVQWIERQDAPRHAVVMDVQMVGSDSASA
                     "
     gene            complement(1851..2249)
                     /gene="panD"
                     /locus_tag="VFV26_05405"
     CDS             complement(1851..2249)
                     /gene="panD"
                     /locus_tag="VFV26_05405"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEX4845635.1"
                     /translation="MLRHFLLGKIHRATVTRADLDYVGSITLDPLLIEAAGFMENEKI
                     DIYDVTNGSRLSTYVIPGVPGSGEVGINGAAAHLVQAGDLVIIAAYGWMTAEEAETVA
                     PKVVFVDERNRITERRTQERTPLCVAAFTD"
     gene            complement(2343..>2672)
                     /locus_tag="VFV26_05410"
     CDS             complement(2343..>2672)
                     /locus_tag="VFV26_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845636.1"
                     /translation="YWKEREKEARKHERHRYEYDEHDRARGRHYRAPAWMDGYWRPGD
                     TRRYVALVPGDPSRCYVFLEGRWVLRQIRDPRARLDLEGAFRLPLAPPPVAPPRLGLD
                     LHVVLFN"
BASE COUNT          417 a          857 c          924 g          474 t
ORIGIN      
        1 tctgatcatc cgagctcccg accatcagat cgagccccga tccaactatg cgctggcgga
       61 atcggatccc accatctgca cgtccatcac cacggcgtgc cgcggcgcgt cctggcgctc
      121 gatccactgg acgcgggcgc ccaggaggcg ggccagctgc agcaggcctt cacgggcctc
      181 ctgatggagg gcgccggaca ggtcggggtg gatgttgagg cggatatcgg cgccgcgcag
      241 gcgctcgccc aggcgcacca gctcgcggta ggccttgagc agggaggtct cggggctctg
      301 caggcggccg gcgccgttgc aggcggggca gggcgtggtg agcaggcgtt ccagcgaggg
      361 gcccgtgcgc ttgcgggtga gctccaccag gccgaattcg gagatgcctc cggcccgggc
      421 gtggttgcgg tcccgcttga gctcctcctg gagccgcgcc agcacttcgt cccggtgggc
      481 cgggtccacc atgtcgatga agtcgatgac cacgatgccg cccaggttgc gcaggcgcag
      541 ctgccgcacg atctcgggga tggcctcgag gttggtgagg tagacggtct cttccagatc
      601 cttcttgccc acgaacttgc cggtgttcac atccacgctg accagggcct cggtctggtt
      661 cagcacgatg gagccgccgt gcttgaggaa gaccttgggc tgccgggcgg aatcgatctc
      721 ggactcgatg ccgaaggcct cgaagatggg caggtccgac gtgaagtgct tcacgcggtt
      781 ggcccattcg gggtgcagct tctccacgaa ggccagcacc tggcggtggg cctcggcgtc
      841 gtccacccag aaggtggaga cctcctcgcg gaagatgtcg cgcagcacct tctggagcag
      901 gcggagatcc tgccagacca ggcccggagc gggcacggtg gcggccttgg cctggatctc
      961 ctgccacatc tggcggagga aggccacgtc gcccaccagg tcctcgtcct tctcgccgat
     1021 ggcggcggtg cggacgatga agccctcgcc cggctgggcg tggctgcgga tcagctcgcg
     1081 gaggcggtcc cgctcttcgg gatccgtgat cttgcgggag atgccgatgt ggtcgatgcc
     1141 cggcatgaag accaggaagc ggccggggaa gctcaggtgc cgggagaggc ggggcccctt
     1201 ggagccgatg ggatccttca ccacctggac cagggtctcc tcgccttcct tgaggggggg
     1261 caggggcggg gggggcggcg gcaggtcctc gccggcctct tcgccttcct cctcggagga
     1321 cagatcggcg ccgaggcgct gcgatacggg gtcatccagg tagaggaagc cgtccttggc
     1381 ccccccgatg cccacgaagg cgctctgcat gcccgggagc agcttggcca cccggccctt
     1441 gtacacatcc cccacctggc tcttgttcat cgtccgttca agaaacagct cgcagagctg
     1501 gccgttctca agcagggcga tgcgcgtctc caggggggtc gaattgacca ccagggactt
     1561 gcggacttcc atggaaccaa cctttcagaa ctttgcagga aggcgccttg cccccaccgc
     1621 gggccccggg gccgtgccag gccggagggt gactcttttc taccatgttc ctaggatgcc
     1681 gcgccaaccg ggggaggttc ctcggatgtt ggttattcct tgctagaaaa aagcgggaca
     1741 ggatcaacag gatgaactgc ttgattaaca ggattaatgc tggctattcg aagcttttga
     1801 aatcctgtta atccttcttt ccaatcctgt taatcctgtc gaggctgttg tcagtccgtg
     1861 aacgcggcca cgcagagggg ggtccgctcc tgggtgcggc gctcggtgat gcggttgcgc
     1921 tcgtccacga agaccacctt gggggccacc gtctcggcct cctcggcggt catccagccg
     1981 taggcggcga tgatcaccag gtcgcccgcc tgcaccaggt gggcggcggc gccgttgatg
     2041 cccacctcgc ccgaacccgg caccccgggg atcacatagg tggacaggcg cgacccgttg
     2101 gtcacgtcgt agatgtcgat cttctcgttc tccatgaacc cggcggcttc gatgagcagc
     2161 gggtccaggg tgatggaccc cacgtagtcc agatcggccc tcgtgacggt ggcgcgatgg
     2221 atctttccga gcaggaagtg gcgcagcatg catcctccgg tccaggctcc ctccggagtc
     2281 ccggccaacg cataaggatg gacccaggat taccctgggt ccatcctcgt tttttgccta
     2341 ccctagttga acaacaccac gtgcagatcg aggcccaggc ggggcggggc cacggggggc
     2401 ggggccaggg gcaggcggaa ggccccttcc agatccagac gggcccgggg atcgcggatc
     2461 tggcgcagca cccagcggcc ttccaggaag acgtagcagc gggagggatc gccaggcacc
     2521 agggccacgt agcggcgggt gtcgccgggg cgccagtagc cgtccatcca ggcgggtgcg
     2581 cggtagtggc ggccccgggc ccggtcatgc tcgtcgtact cgtagcggtg gcgttcgtgc
     2641 ttgcgggctt ccttctccct ttccttccag ta
//
LOCUS       DASUDT010000264         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1470993, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000264 DASUDT010000000
VERSION     DASUDT010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470993"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VFV26_05415"
     CDS             <1..453
                     /locus_tag="VFV26_05415"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX4845637.1"
                     /translation="IIVRGPQVMAGYWEQPEETARTLRDGWLHTGDIGCLDAEGYLQI
                     TDRKKDMIIVSGFNVFPNEVEACIALHPDVADVAVVGVSDESTGEAVRAFVVSRKHLT
                     AEEIRAHCRSLLVNYKVPTRFSFLAEIPKNAVGKALRRELRAVSASEG"
     gene            complement(454..2052)
                     /gene="murJ"
                     /locus_tag="VFV26_05420"
     CDS             complement(454..2052)
                     /gene="murJ"
                     /locus_tag="VFV26_05420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX4845638.1"
                     /translation="MSDPSPSRPSLLRSAGVVGLMTLLSRLTGLLQTFFLSHVLGAGA
                     AADAYAVAFRLPNLLRRFTAEGTMTAAFLPTLAEAEAAEGEGAVRAVAARFLGTLLAV
                     LLLGVALVLVFMGPLAGLLTLGRPESQGALTTTLGRIMFPYLALVSLTAGFAGLLNLR
                     HRFALAASVSVFWNLAFIAFGWTAMKVLERNGAVPMDTVAIVCAVAVLAGGLLQLLVL
                     LPAVRKEGFGLAFGLHLRDPWVRKALRRMGPGLLAAGIYPINALISAMLASTLPDGAQ
                     MVLYNSGMMGEMVLGLFAMSLATASLPALSRQAEARDWPGMNRSLIQSISASALLVLP
                     ASVGLAVLARPICALLFRTGAYDAAAADWTALTLVFQSLGLVFVAAQRLGNQALYALK
                     DYRGPAALAGGTLLLNVALSLALLKPLGTGGLALANGLASLVGLAGLLLRLRPRLPGL
                     DLRPLASATGKALAACVLMGLMAWGGARLLALDAPHAFSRLALALRLLPFVGLCALAY
                     GLAAAGLRHPEARALADKIRRKLG"
BASE COUNT          373 a          730 c          846 g          252 t
ORIGIN      
        1 atcatcgtgc gcggtcccca ggtcatggcg ggctactggg agcagccgga agagacggcg
       61 cggaccctcc gggatggctg gctgcacacg ggggacatcg gctgcctcga cgccgagggc
      121 tacctccaga tcacggaccg caagaaggac atgatcatcg tcagcggctt caacgtcttc
      181 cccaacgagg tggaggcctg catcgccctg catccggacg tggccgacgt ggcggtggtg
      241 ggcgtgtccg acgaaagcac cggcgaggcc gtgcgcgcct tcgtggtgtc ccggaagcat
      301 ttgaccgccg aggagatccg cgcccactgc cggagcctgc tggtgaacta caaggtgccg
      361 acccggttca gcttcctggc tgagatcccc aagaatgccg tgggcaaggc cctgcggcgg
      421 gaactccgcg ccgtctccgc cagcgagggc tgatcagccc agcttccgcc ggatcttgtc
      481 cgccagggcc ctggcctcgg gatgcctgag tcccgcggcg gcgaggccgt aggccagcgc
      541 gcacagcccc acgaagggca ggagccgcag ggcgagcgcc aggcgggaga aggcgtgggg
      601 ggcgtccagg gccaggagcc gggcgccacc ccaggccatc aggcccatga ggacacaggc
      661 ggcgagggcc tttccggtgg cactggccag ggggcgcagg tccaggcccg gcaggcgggg
      721 gcgcaggcgc agcagcaggc ccgcgaggcc cacgaggctg gccagcccgt tggccagggc
      781 caggccgccg gtgcccaggg gtttcagcag ggccaggctg agcgccacgt tcagcagcag
      841 ggtgccgccc gccagggccg cgggaccgcg gtagtccttg agggcgtaga gggcctggtt
      901 gcccaggcgc tgggcggcca cgaagaccag gcccagggac tggaacacca gggtgagggc
      961 cgtccagtcc gcggcggcgg catcgtaggc gccggtgcgg aagagcaggg cgcagatggg
     1021 ccgggccagc acggcgagcc ccacggaggc cggcagcacc agcagggccg aggcggagat
     1081 cgactggatc aggctgcggt tcattcccgg ccagtcgcgg gcctcggcct ggcgcgacag
     1141 cgcaggcagg ctggcggtgg ccaggctcat ggcgaagagg cccagcacca tttcgcccat
     1201 catgccgctg ttgtagagca ccatctgggc gccgtcgggc agcgtggagg ccagcatggc
     1261 gctgatgagg gcgttgatgg ggtagatgcc cgccgccagc aggcccggcc ccatgcgccg
     1321 gagggccttg cgcacccagg gatcgcgcag atgcaggccg aaggcgaggc cgaagccctc
     1381 cttccgcacc gccgggagga gcaccagcag ctggagcagg cctcccgcca gcacggccac
     1441 ggcgcacacg atggccaccg tgtccatggg gacggcccca ttccgctcca gcaccttcat
     1501 ggcggtccag ccgaaggcga tgaaagccag gttccagaag acggagaccg aggccgccag
     1561 ggcgaagcgg tggcggaggt tcagcaggcc cgcgaaccct gccgtgaggc tcaccagggc
     1621 caggtagggg aacatgatgc ggcccagggt ggtggtgagc gcgccctggg actcggggcg
     1681 ccccagggtg aggaggcccg ccaggggtcc catgaagacc agcaccagcg ccacccccag
     1741 cagcaggacg gccaggaggg tgccgaggaa gcgtgccgcg accgccctca cggcgccttc
     1801 gccctcggcg gcctcggctt ccgccagcgt gggcaggaag gccgcggtca tggtgccttc
     1861 ggcggtgaag cggcgcagca ggttgggcag gcggaaggcc acggcatagg catccgccgc
     1921 ggcccccgcc cccagcacgt ggctgaggaa gaaggtctgg agcagtcccg tgaggcggct
     1981 cagcagggtc atcaacccca cgactcccgc ggagcggagc aggctgggac ggctggggct
     2041 gggatcgctc accgtcggca ctgggcagag tggtccatga agctcccggg actggagccg
     2101 ctagtcggaa ttgaaccgcg aactccatgc gggtcgcggt tcaggcctgc acaagcaggc
     2161 ctgagagcgg ggccccgcag gagtgagcat aacgtggaag c
//
LOCUS       DASUDT010000265         4172 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1029309, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000265 DASUDT010000000
VERSION     DASUDT010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4172
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029309"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..2800
                     /gene="gyrA"
                     /locus_tag="VFV26_05425"
     CDS             194..2800
                     /gene="gyrA"
                     /locus_tag="VFV26_05425"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX4845639.1"
                     /translation="MNPNRIEPLEIEKEMRKSYLDYAMSVIVGRALPDVRDGLKPVHR
                     RVLFAMKEAGNDWNRAYKKSARTVGDVMGKYHPHGDSAIYDTLVRMAQPFSMRHVLVD
                     GQGNFGSIDGDSAAAMRYTEARLSRLANEMMGDIDQDTVDFGPNYDGSMEEPLVLPSR
                     FPNLLVNGSQGIAVGMATSIPPHNLRECCRALVDLIDQPSLALEGLMAHIKGPDFPGG
                     GLMLGTEGVLDAYRTGRGRCVVRAKSHVEQIRRAGDREQIVFTELPYQVNKSTLIEKI
                     AELVRDKKIDGISDLRDESDREGIRLVVELKKNEPSDIVLNQLYQQTQLQNSFPITML
                     AIVNGQPRVCTLREILQEFIGFRREVVTRRTLFQLRKAEERHHVLMGLKIALDHLDAV
                     IKLIRAAKSPEDAKAGLMAGAFATAAALKKDPTLCLSAVQAQAILDMRLQRLTGLERE
                     KILDELAELEKTIAKLKAILADESLLLKVIKEELQQVADQFGNDRRTEIVGYSGEIRM
                     EDVVPDDPMVVTMSKAGYIKRTDLNAYRRQRRGGKGKVGMKTKDEDFVEQLFMTKAHD
                     TLMAFTDKGIVYALKVYDLPEAAASTRGKHIRNLISLKDGENVVTLMALRDFPEGENL
                     VFATSDGTVKKSSLAAYANIRANGLIALNIDDDNSLVAVRRSTGTQQIVLATAQGKAI
                     RFPEEDVRATGRATTGVRGMKLAKADHIVDMEVADPLPDLPEGVEPDESTEDHGMLLT
                     VCEKGFGKRSLLQDYRLQGRGGTGVINIRAGVRNGQVVGFKLVKPGEGCLLISQEGMV
                     IRFLIDEVRKTGRNAQGVGLLKLASAEDRVVGLAKIDASAMALDEEEELLDGEVAHPG
                     PDEGGEQPKLGL"
     gene            complement(2855..3262)
                     /locus_tag="VFV26_05430"
     CDS             complement(2855..3262)
                     /locus_tag="VFV26_05430"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX4845640.1"
                     /translation="MYGTLREGGSNHAWLMRTHPEGLTRAWVAGRLFHLPAGYPALVP
                     GAEPQAPPPGPGWVRGDFVGYDDEGDLESALADLDPLEGVEEGLFTREIRPVALEGGA
                     RYRAWVYVFHVERVPRLERDAIELPDGDWATYL"
     gene            complement(3364..>4172)
                     /gene="glyA"
                     /locus_tag="VFV26_05435"
     CDS             complement(3364..>4172)
                     /gene="glyA"
                     /locus_tag="VFV26_05435"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX4845641.1"
                     /translation="RQEDGRVDMDEVRALALQHKPKMIVVGASAYSRTWNFPLFREIC
                     DEVGALLMVDMAHIAGLVATGHHPNPVPHADFVTTTTHKTLRGPRGGMILCKSQYAKD
                     LDRAVFPGVQGGPLMHVIAAKAVAFHEIMQPEFKAYSGQVIRNAHALAKGLQERGWRI
                     VSGGTDNHLFLVDLRDHGLLGHEAEECLHRAGMTTNKNGIPFDPNPPLKPSGVRLGSP
                     ALTTRGMKEEEMDQIARFFDVTLRHRGDESTFARVRQEVFHLTDQFPIPE"
BASE COUNT          755 a         1428 c         1374 g          615 t
ORIGIN      
        1 catcgagacc aacgccttgc ttgcggaaaa cattgatatt taggcctgct ccggattcgg
       61 ccaaaggccg gatccggagt taggaaaaga agcaaatgtt ccacgtggaa ccccgccgat
      121 gactcccctc ttccccactt ctttccatta ctcggaaatc ggccgcaggc cgatttccga
      181 gctgtaggac cccatgaacc cgaatcgcat cgagcccctg gaaattgaaa aagaaatgcg
      241 gaagtcctac ctggactacg ccatgagcgt catcgtgggc cgggccctgc ccgacgtccg
      301 cgacggcctc aagcccgtgc accgccgggt gctgttcgcc atgaaggagg ccgggaacga
      361 ctggaaccgg gcctacaaga agtccgcccg caccgtgggt gacgtcatgg gtaagtacca
      421 tccccacggc gactcggcca tctacgacac cctcgtccgc atggcccagc ccttctccat
      481 gcgccacgtg ctggtggatg gccagggcaa cttcggctcc atcgacggcg attccgccgc
      541 cgccatgcgc tacaccgagg cccgcctctc ccgcctcgcc aacgagatga tgggcgacat
      601 cgaccaggac acggtggatt tcggccccaa ctacgacggc agcatggagg agcccctcgt
      661 cctgccctcc cgcttcccca atctgctggt gaacggctcc cagggcatcg ccgtgggcat
      721 ggccaccagc atcccgcccc ataacctgcg ggaatgctgc cgggccctgg tggacctcat
      781 cgaccagccg agcctcgccc tcgagggcct catggcccac atcaagggac ccgacttccc
      841 gggcggcggc ctcatgctgg gcaccgaagg cgtcctggac gcctaccgca cgggccgggg
      901 ccgctgcgtg gtccgcgcca agtcccatgt ggaacagatc cgtcgggcgg gggaccggga
      961 gcagatcgtc ttcaccgagc tgccctacca ggtgaacaag tccaccctca tcgagaagat
     1021 cgccgagctg gtccgcgaca agaagattga cggcatcagc gacctgcggg acgagtctga
     1081 ccgcgagggc atccgcctgg tggtggagct gaagaagaac gagcccagcg acatcgtgct
     1141 caaccagctc taccagcaga cccagctcca gaacagcttc cccatcacca tgctggccat
     1201 cgtcaacggc cagccccgcg tctgcaccct ccgcgagatc ctgcaggagt tcatcggctt
     1261 ccgccgcgag gtggtcaccc ggcgcaccct gttccagctg cggaaggccg aggagcgcca
     1321 ccacgtcctc atgggcctga agatcgccct ggaccacctg gacgcggtca tcaagctcat
     1381 ccgggccgcc aagagccccg aggacgccaa ggccggcctc atggcggggg ccttcgccac
     1441 cgccgcggcc ctcaagaagg accccacgct ctgcctgtcc gccgtgcagg cccaggccat
     1501 cctggacatg cgcctccagc gcctcacggg cctggagcgg gagaagatcc tcgacgagct
     1561 ggccgagctg gagaagacca tcgccaagct caaggccatc ctggccgacg agagcctgct
     1621 cctgaaggtc atcaaggagg agctgcagca ggtggccgat cagttcggca acgaccgccg
     1681 cacggaaatc gtgggctact ccggcgagat ccgcatggag gacgtggtgc cggacgaccc
     1741 catggtcgtc accatgtcca aggccggcta catcaagcgc accgacctca acgcctaccg
     1801 ccgccagcgc cggggcggca agggcaaggt gggcatgaag accaaggacg aggatttcgt
     1861 cgagcagctc ttcatgacca aggcccacga caccctcatg gccttcacgg acaagggcat
     1921 cgtctacgcc ctcaaggtct acgacctgcc ggaggcggcc gcctccaccc ggggcaagca
     1981 catccgcaac ctcatctccc tgaaggacgg cgagaacgtc gtcaccctca tggccctccg
     2041 ggacttcccg gaaggggaga acctggtctt cgccaccagc gatggcacgg tgaagaagtc
     2101 cagcctggcg gcctacgcca acatccgggc caacggcctc atcgccctca acatcgatga
     2161 cgacaacagc ctggtggccg tgcggcgctc cacggggacc cagcagatcg tgctggccac
     2221 ggcccagggc aaggccatcc ggttcccgga ggaggatgtg cgggccacgg gccgcgccac
     2281 cacgggcgtc cggggcatga agctggccaa ggccgaccac atcgtggaca tggaagtggc
     2341 cgatcccctg ccggacctgc cggaaggcgt ggagcccgac gaaagcaccg aggaccacgg
     2401 catgctgctc acggtctgcg aaaagggctt cggcaagcgc agcctcctcc aggactaccg
     2461 gctccagggc cggggcggca cgggcgtcat caacatccgg gccggggtcc gcaacggcca
     2521 ggtggtgggc ttcaagctgg tcaagcccgg ggaggggtgc ctcctcatca gccaggaggg
     2581 catggtcatc cgcttcctca tcgacgaggt ccgcaagacc ggccgcaacg cccagggcgt
     2641 cggcctgctc aagctggcca gcgccgagga ccgggtggtg ggcctcgcca agatcgacgc
     2701 cagcgccatg gccctggacg aggaggagga actcctcgac ggcgaagtgg cccatccggg
     2761 tcccgacgag ggcggcgaac agccgaagct ggggttgtag ttccgcccca tcttctcggc
     2821 atgcgaaaaa cggcgcgaat cgcgccgttt ttcgttagag gtaggtcgcc cagtccccgt
     2881 ccggaagttc gatggcgtcc ctctcgagcc tcggcacacg ttccacatgg aacacgtaga
     2941 cccaggcgcg gtaccgggcc ccgccttcca gggccacggg ccggatctcg cgggtgaaga
     3001 ggccctcctc cacgccttcg aggggatcca ggtccgccag ggcggattcg aggtcgcctt
     3061 cgtcgtcata gcccacgaag tccccccgca cccagcccgg gcccggggga ggggcctggg
     3121 gttcggcgcc cggcaccagg gcgggataac ccgccggcag gtggaagagc cgcccggcca
     3181 cccaggcccg ggtgaggccc tcggggtggg tccgcatcag ccaggcgtgg ttcgatccac
     3241 cctcccggag cgtgccgtac acaaacaatc catccgccgg aatcatggcc acccctgcaa
     3301 aaacataccg ccaaaacgcg gggcgttttg gcggcagtgg aaccggggct tcccggtgga
     3361 gaactattcc ggaatgggga actggtccgt gaggtggaag acctcctggc ggacgcgggc
     3421 gaaggtgctt tcgtcgccgc gatggcggag ggtcacgtcg aagaagcggg cgatctggtc
     3481 catctcctcc tccttcatgc cgcgggtggt gagggcgggg ctgcccaggc gcacaccgga
     3541 gggcttgagg ggcgggttgg gatcgaaggg gatgccgttc ttgttggtgg tcatgccggc
     3601 ccggtgcagg cactcctcgg cctcgtggcc cagcaggccg tggtcgcgga ggtccaccag
     3661 gaagaggtgg ttgtccgtgc cgccgctgac gatgcgccag ccccgctcct gcaggccctt
     3721 ggccagggcg tgggcgttgc ggatgacctg gccgctgtag gccttgaact cgggctgcat
     3781 gatctcgtgg aaggccacgg ccttggcggc gatgacatgc atgagggggc cgccctggac
     3841 gccggggaac accgctcggt ccaagtcctt ggcatactgg gacttgcaca ggatcatgcc
     3901 gccgcggggg ccgcgcaggg tcttgtgggt ggtggtggtg acgaaatccg cgtgggggac
     3961 ggggttcggg tgatggcccg tggccacgag gcccgcgatg tgggccatgt ccaccatgag
     4021 cagggcgccc acctcgtcgc agatctcccg gaagaggggg aagttccagg tgcggctgta
     4081 ggccgaggcc cccaccacga tcatcttggg cttgtgctgc agggccaggg cgcggacctc
     4141 gtccatgtcc acccggccgt cctcctggcg ca
//
LOCUS       DASUDT010000266         2459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_432844, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000266 DASUDT010000000
VERSION     DASUDT010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432844"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VFV26_05440"
     CDS             <1..355
                     /locus_tag="VFV26_05440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845642.1"
                     /translation="DEVELRSALAEMLEDWFGLDVVPAGDGQEALELFGRQAEAFDLV
                     ILDATMPRMGGVEAFKAMRELRPGLPGILCSGYALPASREQAVAQGFADFLKKPFTSA
                     ELAAILDRVLGIKQV"
     gene            complement(587..2056)
                     /locus_tag="VFV26_05445"
     CDS             complement(587..2056)
                     /locus_tag="VFV26_05445"
                     /inference="COORDINATES: protein motif:HMM:NF017568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IG family 5'-nucleotidase"
                     /protein_id="HEX4845643.1"
                     /translation="MTVWDPALLASPPLTEGEDRLPPAHKLFALRTLPLGEIRAIGFD
                     MDHTLARYRAPEIDELAFKKAARLMVRERGYSPWLLEIEYDPGFAVRGLVLDGLRGNL
                     LKLNRERQVVRACHGSRAMPRPELDAVYGRRRLSTAAKGFRNIDTLFEIPESHLYAQM
                     VDGLDRGLLKAENYLQLFRDVRWAIDTAHRNGEMKAEILEHRHFFIPPDPQLALALDR
                     LKREGKKLFLLTNSEWSFTHGVLSHLLDGQDEARPRWTDYFDLVVVSSRKPAFFLETP
                     EPVPLEGRPRCFTGGHAAWLEAQLGAEGEQVLYVGDHIYGDVLRSKKNASWRTLLLVP
                     ELERELRLLEARNQDMRDLVRLETTRRRTLRRASVLMDQWKRNRVRRHVLGPRLSAEA
                     AVALDHEAAHLASSAEALQRRAELQSLEMDTLTKSVEAAFNPMWGPMFRDRDEQTRFA
                     DQIQQFACAYTGRVGNLYMYDPNATVYAPMPALPHERMG"
     gene            complement(2230..>2459)
                     /locus_tag="VFV26_05450"
     CDS             complement(2230..>2459)
                     /locus_tag="VFV26_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845644.1"
                     /translation="ALLRRRDWPWPQPVCGMNCHTPEDIQRRILEHELIHYKLWMDRE
                     KNWGHSERFRQLAWEVFGHQSMTHGIGSEPD"
BASE COUNT          367 a          810 c          880 g          402 t
ORIGIN      
        1 cgatgaggtg gagctgaggt ccgccctggc ggagatgctc gaggactggt tcgggctgga
       61 cgtggtgccc gccggcgatg ggcaggaggc cctggagctt ttcggccggc aggcggaggc
      121 cttcgacctc gtcatcctgg atgccaccat gccgcgcatg ggcggggtgg aggccttcaa
      181 agccatgcgg gagctccgcc ccggcctgcc ggggatcctc tgcagcggct acgcgctgcc
      241 cgcctcccgg gaacaggccg tggcccaggg gttcgcggat ttcctgaaga agccgttcac
      301 cagcgcggaa ctggccgcca tcctcgaccg ggtgctcggc atcaagcagg tgtgagccgc
      361 caccaaggcc agggattcac cacggagtca cggaaaccac ggaggaggca cggaggcctc
      421 tgtgttcctc cgccatgggc aggccggagg ccgcttccgg ccacgccgga agccacggga
      481 gacgccggat ctggatcctt ttgagggaat ccggacccgg cgcctcccgt gtgcctatgc
      541 tccgtgtctc cgtggtgaat ccttcacagt tggacgcgaa accgcatcag cccatccgct
      601 cgtggggcag ggcgggcatg ggggcgtaca ccgtggcatt gggatcgtac atgtagaggt
      661 tgcccacgcg gcccgtgtag gcgcaggcga actgctggat ctgatccgcg aaccgggtct
      721 gctcgtcgcg gtcccggaac atgggtcccc acatgggatt gaaggccgcc tccacggatt
      781 tcgtgagggt atccatctcg aggctctgca gttcggcgcg ccgctggagg gcctcggcgc
      841 tgctggccag atgcgccgcc tcgtggtcca gggccaccgc ggcctctgcg ctcaggcggg
      901 gccccaggac atggcgccgc acccggttgc gcttccactg gtccatgagc accgaggccc
      961 ggcggagggt gcggcggcgg gtggtctcca gccgcaccag gtcgcgcatg tcctggttcc
     1021 gggcctccag gagcctgagc tcgcgctcca gttcgggcac gagcaggagg gtccgccagg
     1081 aggcgttctt cttggacctc aggacgtcgc cgtagatgtg gtcgcccacg tagagcacct
     1141 gctcgccctc ggcgccgagc tgggcctcca gccaggcggc gtggccgccc gtgaagcagc
     1201 ggggccgccc ctccagtggg accggctccg gcgtctccag gaagaaggcg ggcttccggc
     1261 tgctgaccac caccaggtcg aagtagtcgg tccagcgggg ccgggcctcg tcctggccgt
     1321 ccagcaggtg gctgagcacg ccgtgggtga agctccactc gctgttggtg aggaggaaga
     1381 gtttcttgcc ctcgcgcttg agccggtcca gggccagggc cagctggggg tccggcggga
     1441 tgaagaagtg ccggtgctcc aggatctccg ccttcatctc gccgttgcgg tgggcggtgt
     1501 cgatggccca gcgcacatcg cggaacagct ggaggtagtt ctcggccttc agcaggccgc
     1561 ggtccaggcc gtccaccatc tgggcgtaga gatggctttc cgggatctcg aacagcgtgt
     1621 cgatgttgcg gaagcccttg gccgccgtgg acaggcggcg ccgcccgtag accgcatcca
     1681 gctctgggcg gggcatggcg cggctgccgt ggcaggcgcg gaccacctgg cgctcgcggt
     1741 tgagcttcag caggttgccc cgcaggccgt ccagcaccag gccccgcacg gcgaagccgg
     1801 gatcgtactc gatctccagc agccatgggg aatagccccg ttcccgcacc atcagccggg
     1861 cggccttctt gaaggccagt tcgtcgatct ccggcgcccg gtagcgggcc agggtgtggt
     1921 ccatgtcgaa accgatggcg cggatctcgc ccagaggaag ggtacgcagc gcgaacagct
     1981 tgtgtgccgg cggaaggcgg tcttcgcctt ccgtcaaggg cggcgaagcc aggagggcgg
     2041 gatcccacac agtcatggat tgagcgtact ccaaaccggg agcgaatcat gccgaactcg
     2101 cgcgctcgac taatcgggtt ccgagccgat gccgtgggtc gcgaccatgt gggtcgtgga
     2161 gcaggctccg ggggagcctg cggagcgggg ccccacagcg agcgaatcat gccgaactcg
     2221 cgcgctcgac taatcgggtt ccgagccgat gccgtgggtc atgctctgat gcccgaacac
     2281 ctcccaggcc agctgccgga accgctcgct gtggccccag ttcttctccc ggtccatcca
     2341 cagcttgtag tggatcagct cgtgctccag aatccgccgc tggatgtcct cgggcgtgtg
     2401 gcagttcatc ccgcacaccg gctggggcca gggccagtcc cgtcggcgca gcagggcga
//
LOCUS       DASUDT010000267         3545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_499319, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000267 DASUDT010000000
VERSION     DASUDT010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499319"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VFV26_05455"
     CDS             complement(<1..253)
                     /locus_tag="VFV26_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845645.1"
                     /translation="MTKTILKALSGLLLLAFLLAIPKYVESPYALHMMILLFLSVSQG
                     QSWNILGGYAGQHSVGHAAYFGVGAYATMMLMHTRQIAPW"
     gene            complement(264..1133)
                     /locus_tag="VFV26_05460"
     CDS             complement(264..1133)
                     /locus_tag="VFV26_05460"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4845646.1"
                     /translation="MAVFLQSLISGVLIGGVYALIGIGLTLIFGVMRVINFAHGDIMM
                     VGMYLTYLLFTMLGIDPFVSVLISFPLMFLFGGFLQKTFINRVLNAVAQNQILLTIGL
                     GLIMSNAMMLVFTSDYKILTTSYSSSTIQVGGGVSVSLPLLISFLITAAITAALYWFL
                     LKTDTGQAIRATAQDRDAAQLMGINVSRMSIIAFGLGAALAGTAGALISPTYYIFPQV
                     GATFTLKAFVITVLGGMGSVVGATLGGILIGITESMSAVYISSGWKDVVVFVLFLLVL
                     LFKPAGLMGKSRT"
     gene            complement(1241..2386)
                     /locus_tag="VFV26_05465"
     CDS             complement(1241..2386)
                     /locus_tag="VFV26_05465"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4845647.1"
                     /translation="MRKHILALGAALALSPCLMAQKIGVINSMSGPEAPIGENITNGI
                     KLAEEDLKKKGIQVQLVWEDDTGKPQISMSAMEKLATRDNVAGVVGPYTSACSNAVAK
                     LAEKYRVPLLIPAAAKEEITRQGLKHVFRMNAPADKYASSLIDAATSLGKPTTIAFIY
                     ENTDFGTSTTKTAKDYVAKKGIQVVADEAYPKGAADYRSTLAKVKSKNPDLVFMVSYV
                     ADAILLMRQSKEVGLQPQAFLGAGAGFTTTEFAKERAISESVISCTQWTDDVSWPGAK
                     DFSNRYQAKFGKQPTYHAACAYASMMIMAETARNAGGDRAKTRDGLKAGKWNGVMGEV
                     KFADYDGFTNQNDHQMLVQQILNGNYETVLPSQFATKKAVYPFPKWK"
     gene            complement(2532..>3545)
                     /locus_tag="VFV26_05470"
     CDS             complement(2532..>3545)
                     /locus_tag="VFV26_05470"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX4845648.1"
                     /translation="ITDTWSWNIMFNPDNAANTVGNNVLQDVVATWAPGNGFEVKAGQ
                     FKMPTTYEATMVAAKDILFFDRNQVNRVIGDKRDRGIWASYKYGHAESFTGKVSLAVS
                     NGSTDDGSGGKTAVDANAQKDFMGRFEGTFSKEHKFGFYYRDGVHAVKDINTVAGTFA
                     GVTPPTAAEVRDNKDRTTLMGAYYAFTNESWYADAEYATGLLGRRFPSLFAAGAPAAG
                     RQHLDQKFMGFAVTGVYKMGQHWLLARYDVMDYNAGDDWYTAYNPYTETAVGVSRNAD
                     YSPKFTELTLGYNYVFVPTKSSYGKLKFDYILRSKNFKQPIAPETGEKGGDSFVVSLQ
                     LGF"
BASE COUNT          638 a         1016 c         1213 g          678 t
ORIGIN      
        1 cccagggggc gatctgcctg gtgtgcatga gcatcatggt ggcgtaggcg cccacgccga
       61 aataggccgc atggcccacc gaatgctgcc ccgcatagcc gccgaggatg ttccagctct
      121 ggccctggga cacgctcagg aagagcagga tcatcatgtg cagcgcgtag gggctttcca
      181 cgtatttggg gatggccagc aggaaggcca ggaggaggag gccggagagg gccttgagga
      241 tggtcttggt catgttgatc tcctcaggtc cgcgacttgc ccatcaagcc cgcgggcttg
      301 aagaggagca cgagcaggaa gagcacgaag accacgacat ccttccagcc ggaggagatg
      361 tagaccgcgc tcatggattc ggtgatgccg atgaggatgc cgcccagggt ggcgcccacc
      421 acgctgccca tgccgcccag caccgtgatg acgaaggcct tcagggtgaa ggtcgcgccc
      481 acctgcggga agatgtagta ggtcggcgag atcagcgcgc cggcggtgcc cgccagggct
      541 gctcccaggc cgaaggcgat gatggacatg cggctgacgt tgatgcccat gagctgcgcc
      601 gcgtcccgat cctgggccgt ggcccggatg gcctggcccg tatccgtctt cagcaggaac
      661 cagtacagcg ccgccgtgat ggccgcggtg atcaggaacg agatgagcag gggcagggac
      721 accgagaccc cgccgcccac ctggatggtg gaggacgagt acgaggtggt caggatcttg
      781 tagtccgagg tgaagaccag catcatcgcg ttgctcatga tgagccccag cccgatggtc
      841 agcaggatct ggttctgggc cacggcgttc agtacgcggt tgatgaaggt cttctggagg
      901 aagcccccga agaggaacat cagcgggaag ctgatgagca cggacacgaa gggatcgatg
      961 cccagcatcg tgaacagcag atacgtgagg tacatcccga ccatcatgat gtcgccgtgg
     1021 gcgaagttga tgacccgcat cacgccgaag atgagcgtga ggccgatgcc gatgagcgcg
     1081 tacacaccac cgatcaggac gccgctgatg agggattgga ggaatacagc catgggggct
     1141 caggtctcct ggaagcaagc cccagcccgg ctttgccgga ctggggcgcg ggggccccgg
     1201 gggtatgcgc gcaaggcgct acccccggga gaatccggcc tcacttccac ttggggaagg
     1261 gatagaccgc cttcttggtg gcgaactggg aaggcagcac ggtctcgtag ttcccgttga
     1321 ggatctgctg cacgagcatc tgatgatcgt tctggttggt gaagccgtcg tagtcggcga
     1381 acttgacctc gcccatgacg ccgttccact tgccggcctt caggccgtcg cgggtcttgg
     1441 cccggtcccc accggcgttc ctggcggtct cggccatgat catcatcgag gcataggcgc
     1501 aggcggcatg gtaggtgggc tgtttgccga acttggcctg gtagcggttg ctgaagtcct
     1561 tggccccggg ccagctcaca tcatccgtcc actgggtgca ggagatgacg ctctcggaga
     1621 tggcgcgctc cttggcgaac tccgtggtgg tgaagccagc gcccgcgccg aggaaggcct
     1681 ggggctggag gcccacttcc ttggactgcc gcatgaggag gatggcatcg gccacgtagg
     1741 acaccatgaa gaccaggtcg ggattcttcg acttcacctt ggccagggtg gagcggtagt
     1801 ccgcggcgcc cttgggatag gcctcgtccg ccaccacctg gatgcccttc ttggccacgt
     1861 agtccttggc ggtcttggtc gtggacgtgc cgaaatcagt gttttcgtag atgaaggcga
     1921 tggtcgtcgg cttgccgagc gaggtagccg cgtcgatgag gctggaggcg tacttgtccg
     1981 cgggggcgtt catgcggaag acatgcttga ggccctggcg cgtgatctcc tccttcgcgg
     2041 ccgcaggaat aagcaacggc acgcggtact tctccgcgag cttggccacg gcgttggagc
     2101 aggcggaggt gtagggccct acgacacccg cgacgttgtc gcgcgtggcg agcttctcca
     2161 tggcactcat ggagatctgg ggcttgcccg tgtcgtcctc ccacaccagc tgcacctgga
     2221 tgcccttctt cttgaggtct tcctccgcga gtttgatgcc gttggtgatg ttctcgccga
     2281 tgggcgcctc gggaccgctc atcgaattga tgacgccgat cttctgcgcc ataaggcagg
     2341 gagagagggc gagagctgcg cccagggcca ggatgtgctt tcgcatggcg actccagtgc
     2401 aaaagagatg tgggtggaag gtatgggaaa ttctacaccc aaaggcgtac aaaaaacacg
     2461 gaaccctcag gattggcctg gggttccgtg tgccgtgcag agacaatttt gctaggtaga
     2521 acgtgcagtg gctagaagcc cagctggagg gagacgacga agctgtctcc acccttttcg
     2581 ccggtctcgg gagcgatggg ctgcttgaag ttcttgctgc gcaggatgta gtcgaacttg
     2641 agcttgccgt agctgctctt ggtcggaacg aagacgtagt tgtagccgag cgtgagttcc
     2701 gtgaacttcg gggagtagtc cgcgttgcgg ctcacgccca cggcagtctc cgtgtagggg
     2761 ttgtaggcgg tgtaccagtc gtcccctgcg ttgtagtcca tcacgtcgta gcgggccagg
     2821 agccagtgct ggcccatctt gtagacgccg gtcaccgcga agcccatgaa cttctggtcc
     2881 aggtgctggc ggccggcggc aggagcccca gcagcaaaga ggctggggaa gcggcggccc
     2941 agcaggcccg tggcgtactc ggcatcggca taccaggatt cattggtgaa cgcatagtag
     3001 gcgcccatca gcgtcgtccg gtccttgttg tcgcggactt cggcggcggt ggggggggtg
     3061 acgccagcga aggtgcccgc cacagtattg atgtccttca cggcatgcac gccatcgcgg
     3121 tagtagaagc cgaacttgtg ctccttggag aaggtgcctt caaaacggcc catgaaatcc
     3181 ttctgcgcat tggcgtcgac cgccgtcttg ccgccgctgc catcgtcggt ggaaccgttg
     3241 gagaccgcca ggctcacctt gcccgtgaag gattcggcgt ggccgtactt gtagctggcc
     3301 cagatgccgc ggtcccgctt gtcgccgatg acccggttca cctggttgcg gtcgaagaag
     3361 aggatgtcct tggcagccac catggtggct tcgtaggtgg tgggcatctt gaactggccg
     3421 gccttcactt cgaagccgtt gccgggagcc caggtggcca ccacgtcctg gagcacgttg
     3481 ttcccaaccg tgttcgcggc gttatcaggg ttgaacatga tgttccagga ccaggtgtca
     3541 gtgat
//
LOCUS       DASUDT010000268         2774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1316519, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000268 DASUDT010000000
VERSION     DASUDT010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2774
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316519"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VFV26_05475"
     CDS             <1..493
                     /locus_tag="VFV26_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4845649.1"
                     /translation="SRWIEVAAGRPADWEGWRVLPFALPHDAEDPVAYRVETGASAAA
                     VVTDLGHPTALVAAHLQDLDLLVLEANHDVDMLREGSYPPQLKARILSRVGHLSNAAM
                     AELLGRVLSPRLKQVVLAHLSESNNDPGLARFAAEEILRGSPVALHVAQQREPLALPP
                     SMA"
     gene            507..1184
                     /locus_tag="VFV26_05480"
     CDS             507..1184
                     /locus_tag="VFV26_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX4845650.1"
                     /translation="MLRHTLLPLLLSLPLAAQPVPPLREAVERFDTAQAQVQTLQCPF
                     TLTLRRALLKTPSVTKGTLYLQGSEFAHFAFQPPEDLILHLTPKALISYSPEAKEGER
                     MKIGLIKNANRKFLGLGQKLSYLSEYFQIRLEEGKDLPGTWFLAMTPRTLSMRKRMQA
                     MNLWVDRETWLPRQVQWVERSGDSWLVELGALRINQPLPPTVTGFVLPEGIPLRGDFS
                     FFATRKK"
     gene            1218..1838
                     /locus_tag="VFV26_05485"
     CDS             1218..1838
                     /locus_tag="VFV26_05485"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX4845651.1"
                     /translation="MIVVCPACQARFQYDDSRFGEARTKRFKCPKCSHVFEVANPAMA
                     APPPAEILSRPLPSFQPEPESGPTPQAPLAHALTTARRDRDAMLVAAGIQEAGLPPGF
                     RFSLAFLSGPQASTVQVLSRPQIVIGREDGDVITQDPETSRRHAVLEIRSDGTVWLID
                     QQSTNGTQVNGERITGPVQLSSQQEFTCGNSTFMLLIRDTNEFPLH"
     gene            1872..>2774
                     /locus_tag="VFV26_05490"
     CDS             1872..>2774
                     /locus_tag="VFV26_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845652.1"
                     /translation="MTPDPYAPYLRQADELFAQGEIVKAGQIWQAILKQQPAHAEARE
                     RLLVLRERLLAQRQAEAAAPPPPAPAEPEPIPEAPAPEPEPVAPPPAPASATAPDPTP
                     SEVGPGRLVIEGCTLYDMGQVADALQKWEQALAIDPGNTLALGYANGARRELGLSSLQ
                     AEVPATQEPPAFTDDEDVAKLLREAVQLYDMGLTEEAISKWERVLVLEPHRDEIRVYL
                     RQARLEVTQIQHQPVPAPVAAPAPVPSPAVVSAPAPAPAPALPSDAEALALKLRQAEH
                     LLSLQRYEEAAFTYQQALSLAPGHP"
BASE COUNT          442 a         1094 c          835 g          403 t
ORIGIN      
        1 ttcccgctgg atcgaggtgg cggcgggacg gcccgcggac tgggaaggct ggcgcgtcct
       61 ccccttcgcc ctgccccacg atgcggagga ccccgtggcc taccgcgtcg agaccggggc
      121 ttcggcggcg gcggtggtga cggacctggg ccaccccacg gccctggtgg ccgctcacct
      181 ccaggacctg gacctcctgg tgctggaggc caaccacgat gtggacatgc tgcgggaggg
      241 cagctatccc ccccagctca aggcccgcat cctcagccgc gtaggccacc tgagcaatgc
      301 ggccatggcc gagctgctgg gccgggtgct gtcgccccgt ctgaagcagg tcgtgctggc
      361 gcacctgagc gaatccaaca acgatcccgg cctggcccgc ttcgccgccg aggagatcct
      421 ccggggaagc cctgtggcgc tgcacgtggc ccagcagcgc gaacccctgg ccctgccccc
      481 ttccatggcc tgaacccggg aaccccatgc tccgacacac ccttcttccc ctgttgctgt
      541 cccttcctct ggcggcccag cccgtgccgc cgctgcgcga ggcggtcgaa cgcttcgaca
      601 cggcccaggc ccaggtccag accctgcagt gtcccttcac gctgaccctg cggcgggccc
      661 tgctgaagac cccctcggtg acgaagggga ccctgtacct ccagggctcc gagttcgcgc
      721 acttcgcctt ccagcccccg gaggacctga tcctccacct cacgcccaag gccctcatct
      781 cctacagccc cgaggccaag gagggcgaac ggatgaagat cggcctcatc aagaacgcca
      841 accgcaagtt cctgggcctg ggccagaagc tcagctacct gtccgagtac ttccagatcc
      901 gcctggagga gggcaaggac ctgcccggca cctggttcct ggccatgacg ccgcggacgc
      961 tctccatgcg gaagcgcatg caggccatga atctctgggt ggaccgggaa acctggctgc
     1021 cccgccaggt ccagtgggtc gagcgcagcg gggattcctg gctggtggaa ctgggggccc
     1081 tccgcatcaa ccagcccctg ccgcccacgg tcactggttt cgtgctcccc gagggcattc
     1141 ccctgcgcgg cgacttcagc ttcttcgcca cgcggaagaa gtagggagta gacttcagag
     1201 gcgttttcga gggaccaatg atcgtggtgt gcccggcctg ccaggcccgc ttccagtacg
     1261 acgacagccg cttcggggaa gcccgtacga agcgcttcaa gtgcccgaag tgcagccatg
     1321 ttttcgaggt ggccaacccg gccatggcgg ccccgccacc cgcggagatc ctttcccggc
     1381 ccctccccag cttccagcct gaaccggaat ccggacccac gccccaggcg ccgctggccc
     1441 acgccctcac caccgcccgc cgggaccgcg atgccatgct ggtggccgca ggcatccagg
     1501 aggccggcct gccgccggga ttccgcttca gcctggcctt cctgagcggc cctcaggcct
     1561 ccaccgtgca ggtgctcagc cgcccccaga tcgtcatcgg ccgggaggat ggcgatgtca
     1621 tcacccagga tcccgaaacc tcccgccgcc atgccgtcct tgaaatccgc agcgacggaa
     1681 cggtatggct catcgatcag caatccacca acggcaccca ggtgaacggc gaacgcatca
     1741 cgggcccggt ccagctcagc agccaacagg aattcacctg cggaaacagc accttcatgc
     1801 tgctgattcg cgacaccaat gagttcccgc tgcactgagc cccgtgatcc cttgcccaac
     1861 cgagcgacac catgacgcca gatccctacg cgccctatct ccgccaggcg gacgagctct
     1921 tcgcccaggg ggagatcgtc aaggcgggcc agatctggca ggccatcctc aagcagcagc
     1981 ccgcccacgc cgaggcccgc gaacgcctgc tggtcctccg ggagcgcctg ctcgcccaac
     2041 gccaggccga ggctgcggcg ccccccccgc cggcccccgc cgagcctgaa cccatccccg
     2101 aagccccggc ccccgaaccg gagcccgtgg cgcccccgcc agcccccgct tccgccacag
     2161 ccccagatcc caccccctcc gaagtcggtc ccggccgcct cgtgatcgag ggctgcaccc
     2221 tctacgacat ggggcaggtg gccgatgccc tccagaagtg ggaacaggcc ctcgccatcg
     2281 accccggaaa caccctggcc ctgggctatg ccaatggcgc ccgccgggag ctggggcttt
     2341 cctccctcca ggccgaggtc cccgccaccc aggaaccccc ggccttcacc gacgacgagg
     2401 atgtggccaa gctgctgcgc gaggcggtcc agctctacga catgggcctc acggaggagg
     2461 ccatctccaa gtgggagcgg gtcctggtcc tggagcccca ccgcgacgag atccgcgtct
     2521 accttcgcca ggcgaggctg gaggtgaccc agatccagca ccagcccgtt ccggcgcctg
     2581 tcgccgcgcc ggctcccgtc ccatctccag ccgtcgtttc cgcgccagct cccgcccccg
     2641 ccccggctct gccttcggat gcggaggccc tggccctgaa gctccggcag gcggagcacc
     2701 tgctgtccct ccagcgctat gaagaagcgg ctttcaccta ccagcaggcc ctgagcctgg
     2761 cccccggcca tccc
//
LOCUS       DASUDT010000269         5669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_985310, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000269 DASUDT010000000
VERSION     DASUDT010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5669
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985310"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VFV26_05495"
     CDS             complement(<1..410)
                     /locus_tag="VFV26_05495"
                     /inference="COORDINATES: protein motif:HMM:NF012995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HEX4845653.1"
                     /translation="MSVEFDLDAYFERVGFGGEPKASLDTLFALHFAHATRVPFENLD
                     IQMGLPIRLDLPSLQDKLVRRRRGGYCFEQNTLFLAALKVIGFDVIACEARVRLGAPD
                     ILPRTHMLLLVRMEEAFWLSDVGFGGEGLLWPVA"
     gene            complement(400..570)
                     /locus_tag="VFV26_05500"
     CDS             complement(400..570)
                     /locus_tag="VFV26_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845654.1"
                     /translation="MSFDAATRAAFLRRHAEGPALLGGAWAELRPHADHPEVHAAQIR
                     RNLAAWRPAHVR"
     gene            697..3294
                     /locus_tag="VFV26_05505"
     CDS             697..3294
                     /locus_tag="VFV26_05505"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HEX4845655.1"
                     /translation="MPSRSLTSLALALAASLLTAQRGPAPQAVPNGGGAPAPRPAAAP
                     DASEPKPYDKVITSEAKSQEGLIKVHQLKGKLYFEIPKVRLDQELLLVVSANRTPANI
                     DHAGRVLDSDVVRWILKENRVLLKQVSHTVVADPAKPVAKAVAASTNETILMSFPVEA
                     FAKDGSPVIEASRLFTSEVPEYSARQLLGAQMFDASRSFVDKVKAFPANLNVEAVQTY
                     SVPFSPAGAMSLPAPTPFGTATLRPGTSGTVTMFYSFVQLPEKPMLPRVFDERLGFFS
                     VRNTDYGRDEHEASRRTYITRWRLEKKDPAAAVSEPVKPITFYIDSATPKQWVPFVKK
                     GVEAWQVAFEAAGFKNAIVAKPAPAKEEDPDFDAGDARYSVIRWAPSTIANAYGPHIS
                     DPRTGEILEADIVIYHNILQLQRDWYFTQVAPLDKRAQTLPMPDDLIGEMLAYVVTHE
                     VGHSLGFPHNFKASSQYPLEKIRDKAWVKKMGHVSTLMDYSRFNYVAQPEDGFEPADL
                     IPKVGPYDIFAVKWGYTPIPAAKTSDEEKATLNEWLKPQEKEPWLRFSTAGGAGVDPG
                     EQTEAVGDADAVKATTLGTKNLQRVMALLPKAALKPGRDFKDLAHLYDAVWGQWRREL
                     GHVAVLVGGFDSENKHAGQPGGRFTPVPRARQAEAVKYLGEAVFKTPAWLLDPALLAK
                     LEPNSGQMRLLTAQRGVLSALLDRARLSRLEEQESLLGDKAYTPSLLLGDLRGSVFTE
                     LQGPAAKVDPYRRNLQRAYVELLGSLLNQPAAPSLAMSGLGGSLLQANPSDDTRGAVR
                     AELKALQAITAKPAATKATKAHLDDLKDQIARILDPKFLSAPAPASVLSTGRRATDTC
                     WPGVVDLQD"
     gene            3320..5023
                     /gene="ggt"
                     /locus_tag="VFV26_05510"
     CDS             3320..5023
                     /gene="ggt"
                     /locus_tag="VFV26_05510"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX4845656.1"
                     /translation="MRSPLRALLPVAIAALLSPAHAGDRVTGRAFATRSEVAAQHGMA
                     CTSQALVTQIALDILKQGGSAVDAAIAANAALGLMEPTGSGMGGDLYAIVWDAKTKKL
                     HGLNGSGRSPKSLSLDHFKKLGLKHIPAQGPLPVSVPGCVDGWFELHGKFGKLPMAQV
                     LAPAIRYAKDGFPVSELIAYYWGRSVPALGKYPGFLETFTVDGKRGPVSGEVFRNPRL
                     ARTLELLAREGRDAFYKGEIARKIDAYMKANGGFLRYEDLAAHRSDWVEPVSVNYRGY
                     DVWELPPNGQGIAALQMLNILEGYDFSKIPFGSPQHVHLFTEAKKLAFEDRAKFYADA
                     DFMKVPLAWLLSKDYAAQRRALIGDRASRRLEAGHPPLKEGDTVYLTTADGEGNMVSL
                     IQSNYRGMGSGMTPGDLGFCLQDRGELFNLEEGNANTYAPGKRPFHTIIPGFITKDGQ
                     PFLSYGVMGGEFQPMGHVQIVMNLIDFAMNAQEAGDAPRMSHDGSPEPTGEKGKLPGT
                     IQLESGFPYETVRELMNRGHGVGWLLGGYGGYQAIRWDPKQKVYFGASESRKDGQAAG
                     Y"
     gene            complement(5270..>5669)
                     /locus_tag="VFV26_05515"
     CDS             complement(5270..>5669)
                     /locus_tag="VFV26_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX4845657.1"
                     /translation="DQISQIGRMTAIVDVYDALTSNRVYHKGKEPSEVLKRLLEWSGT
                     HLDGELVQLFIRTLGIYPVGSLVRLSSERLAVVVEQGEDLLRPTVRVVYDIRRKVWPH
                     PRDLDLARSQDQIVDYQEPGDWGVDPGAYL"
BASE COUNT          999 a         2086 c         1773 g          811 t
ORIGIN      
        1 atggccacgg gccagagcag cccttcgcct ccgaatccca cgtcggagag ccagaaagcc
       61 tcctccatgc ggaccagcag gagcatgtgg gtgcggggca ggatgtcggg agcccccagc
      121 cgcacccgcg cctcgcaggc aatcacgtcg aagccgatca ccttcagggc cgcaaggaac
      181 agcgtgttct gctcgaagca gtagccgccc cgccgccggc gcaccagctt gtcctggagg
      241 gaaggcaggt cgagccggat gggcaggccc atctggatgt cgaggttctc gaaggggacg
      301 cgggtggcgt gggcgaagtg caatgcgaag agggtgtcca ggctggcctt cggctcgccg
      361 ccgaatccaa cgcgctcgaa gtaggcatcc agatcgaatt caacggacat gcgccggcct
      421 ccaggctgcc aggttccgcc ggatctgggc ggcatggacc tccggatggt ctgcatgggg
      481 gcgaagctcc gcccaggccc cgcccagcag ggccggccct tcggcatggc gccggaggaa
      541 cgcggcccgg gtggcggcat cgaaggacat ggggaacctc gacttcagtg tcccaccctt
      601 ggagcgccga ccgcgggggg agacgcagag gaaataagca tcgaattgtg atgcaaacat
      661 gcctaccatg ggggccagat ctcctctgga gcccccatgc cttcccgcag cctgaccagc
      721 ctcgccttgg ccctcgccgc cagcctcctc accgcccagc gcggccccgc tccccaggcg
      781 gtccccaacg ggggcggcgc ccccgccccg cgccccgccg ccgcgccgga cgcctccgag
      841 cccaagccct acgataaagt catcacctcc gaggccaaat cccaggaggg gctcatcaag
      901 gtccaccagc tgaaggggaa gctctacttc gagattccca aggtccggct ggatcaggag
      961 ttgctgctgg tggtttccgc caaccgcacc ccggccaaca tcgaccatgc tggccgggtg
     1021 ctggattcgg atgtggtgcg ctggatcctc aaggaaaacc gggttctgct caagcaggtc
     1081 tcccatacgg tggtggccga tccggcgaag cccgtcgcca aagccgtggc ggcctccacc
     1141 aatgaaacca tcctcatgag cttccccgtg gaggccttcg ccaaggacgg ctcaccggtc
     1201 attgaggcca gccgcctctt cacttcggaa gttccggaat acagcgcccg ccagctgctg
     1261 ggcgctcaga tgttcgacgc ttcccggagc ttcgtggaca aggtgaaggc cttccccgcc
     1321 aacctgaacg tggaggccgt ccagacctac agcgtgccct tcagccccgc gggcgccatg
     1381 agcctccccg cccccacgcc cttcggcacg gccaccctgc gccccggtac cagcggcacc
     1441 gtgacgatgt tctactcctt cgtccagctg cccgagaagc ccatgctgcc ccgcgtcttc
     1501 gacgagcgcc tgggcttctt cagcgtccgg aacacggatt acggccggga cgagcacgaa
     1561 gccagccgcc gcacctacat cacccggtgg cgcctggaga agaaggatcc cgcggccgcg
     1621 gtgagcgagc cggtgaagcc catcaccttc tacatcgaca gcgccacccc caagcagtgg
     1681 gtgccgttcg tgaagaaggg cgtggaagcc tggcaggtgg ccttcgaggc ggcgggcttc
     1741 aagaacgcca tcgtggcgaa gcccgccccg gccaaggagg aggatcccga tttcgatgcc
     1801 ggggatgccc gctactccgt catccgctgg gccccctcga ccatcgcgaa cgcctacggc
     1861 ccgcacatca gcgatccccg caccggcgag atcctggaag ccgacatcgt catctaccac
     1921 aacatcctgc agctccagcg ggactggtac ttcacccagg tggcgcccct cgacaaacgc
     1981 gcccagaccc tgcccatgcc cgatgacctc atcggcgaga tgctggccta cgtggtgacc
     2041 cacgaggtgg gccactccct gggcttcccc cacaacttca aggccagctc ccagtacccc
     2101 ctcgagaaga tccgcgacaa ggcctgggtg aagaagatgg gccacgtctc caccctcatg
     2161 gactacagcc gcttcaacta cgtggcccag cccgaggacg gcttcgagcc cgcggacctg
     2221 atccccaagg tcggccccta cgacatcttc gccgtgaagt ggggctacac gcccattccc
     2281 gccgccaaga cctccgacga ggagaaggcc accctcaacg agtggctgaa gccccaggag
     2341 aaggagccct ggcttcgctt ctccaccgcc ggcggcgcgg gcgtggatcc tggcgagcag
     2401 accgaggccg tgggcgacgc cgatgcggtg aaggccacca ccctcggcac caagaacctc
     2461 cagcgcgtca tggccctgct gcccaaggcg gcactgaagc ccggccggga cttcaaggac
     2521 ttagcccacc tctacgatgc cgtgtggggc cagtggcgcc gcgaactggg ccacgtggcc
     2581 gtgctcgtgg gcggcttcga ttccgagaac aagcacgcgg gccagcccgg cggccgcttc
     2641 acgcccgtgc cccgggcccg ccaggccgag gccgtgaagt acctgggcga ggcggtgttc
     2701 aagaccccag cctggctcct ggatcccgcc ctcctggcca agctggagcc caacagcggg
     2761 cagatgcgcc tcctaaccgc ccagcgcggc gtgctgagcg ccctgctgga ccgcgcccgc
     2821 ctctcccgcc tggaggagca ggagagcctg ctgggcgaca aggcctacac ccccagcctg
     2881 ctgctgggcg acctgcgggg tagtgtgttc acggaactcc agggccccgc ggccaaggtg
     2941 gacccctacc gccggaacct ccagcgcgcc tacgtcgagc tgctgggctc cctgctgaac
     3001 cagcccgccg cccccagcct ggccatgagc ggcctgggtg gcagcctgct ccaggccaac
     3061 cccagcgacg acacccgcgg cgcagtccgg gccgagctca aggccctcca ggccatcacg
     3121 gccaagcccg cggccaccaa ggccaccaag gcccacctgg acgacctgaa ggaccagatc
     3181 gcccgcatcc tggatcccaa gttcctgtct gcgccggctc ccgcgagcgt cctctccacg
     3241 ggccgccggg ctacggacac ctgctggccc ggggtcgtcg acctccagga ctgatccacc
     3301 cgacccagag gagcccccca tgcgctcacc gctccgcgcc ctgcttcccg tcgccatcgc
     3361 cgccctgctc tccccggccc atgccggcga ccgggtcacc ggccgggcct tcgccacccg
     3421 ctccgaggtg gcggcccagc acggcatggc ctgcaccagc caggccctgg tcacccagat
     3481 cgccctcgac atcctcaagc agggcggctc tgccgtggat gccgccatcg ccgcaaatgc
     3541 ggccctgggc ctcatggagc ccacgggcag cggcatgggg ggcgacctct acgccatcgt
     3601 gtgggatgcc aagaccaaga agctgcacgg cctcaacggc agcggaaggt cgccgaaatc
     3661 cctctccctc gatcatttca agaagctggg cctcaagcac atccccgccc aggggcccct
     3721 gcccgtgagc gtgccgggct gcgtggacgg ctggttcgag ctgcacggga agttcggcaa
     3781 gctgcccatg gcccaggtgc tggccccggc catccgctac gccaaggatg gtttccccgt
     3841 cagcgaactc atcgcctact actggggccg cagcgtgccg gccctgggca agtatccagg
     3901 cttcctggaa accttcacgg tggacggcaa gcgcgggccc gtcagcggcg aggtcttccg
     3961 caacccgcgc ctggcccgga cgctggagct cctggcccgg gagggccgcg acgccttcta
     4021 caagggtgag atcgcccgga agatcgacgc ctacatgaag gccaacggcg gcttcctccg
     4081 ctacgaggac ctggcggccc accgctcgga ctgggtggag ccggtgagcg tcaactaccg
     4141 cggctatgac gtgtgggagc tgccccccaa cggccagggc atcgccgccc tccagatgct
     4201 gaacatcctc gagggctatg acttctccaa gatccccttc ggcagccccc agcacgtgca
     4261 tctcttcacg gaagccaaga agctggcctt cgaggaccgg gccaagttct acgccgacgc
     4321 cgacttcatg aaggtgcccc tcgcctggct gctctcgaag gactatgccg cccagcgccg
     4381 ggccctcatc ggcgatcgcg cctcgcgccg cctggaggcg ggccacccgc ccctgaagga
     4441 aggcgatacc gtctacctca ccaccgccga cggcgaaggc aacatggtga gcctcatcca
     4501 gagcaactac cggggcatgg gcagcggcat gacccccggc gacctgggct tctgcctcca
     4561 ggaccggggc gagctgttca acctcgagga aggcaacgcc aacacctacg cgccgggcaa
     4621 gcggcccttc cacaccatca tccccggctt catcaccaag gacggccagc ccttcctcag
     4681 ctacggcgtc atgggcggcg agttccagcc catgggccat gtgcagatcg tcatgaacct
     4741 catcgacttc gccatgaacg cccaggaggc cggcgacgcc ccccgcatga gccacgacgg
     4801 ctccccggag cccaccggcg agaagggcaa gctgcccggc accatccagc tggagagcgg
     4861 ctttccctac gagaccgtgc gggagctgat gaaccgcggc catggcgtgg gctggctgct
     4921 gggcggctac ggcggctacc aggccatccg ctgggatccg aaacagaagg tctacttcgg
     4981 cgccagcgag tcccgcaagg atggacaggc ggcggggtac tagccatacc aagtcgccgc
     5041 caatgataga gattcaccac ggagtcacgg aaaccacgga ggaggcccag aggcctccgc
     5101 ggtcctccgc catgggcagg ccggaggccg cttccggcca cgccggaagt cacgggagac
     5161 gccgggtccg gatccttttg agggaatccg ggcccggcgt ctcccgtgtg cccatgctct
     5221 gtgtctccgt ggtggatcct ttacgattga acgcgaaacc atatcagatc taaaggtacg
     5281 cccccgggtc cacaccccaa tcgccaggct cctggtagtc cacgatctgg tcttgggacc
     5341 tggcaagatc caggtcgcgg ggatggggcc agaccttccg ccggatgtcg tagaccacgc
     5401 gcaccgtggg ccggagcagg tcctcgccct gctccaccac caccgccaac cgctcgctgg
     5461 acagccgcac cagggagccc acgggataga tgcccagggt ccggatgaac agctgcacca
     5521 gctcgccgtc caggtgggtg ccgctccatt cgaggaggcg cttcagcacc tcggaaggct
     5581 ccttgccctt gtggtagacg cggttggacg tcagggcgtc gtagacatcc acgatggcgg
     5641 tcatgcgccc gatctgggag atctggtca
//
LOCUS       DASUDT010000270         2530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_168310, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000270 DASUDT010000000
VERSION     DASUDT010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168310"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VFV26_05520"
     CDS             <1..339
                     /locus_tag="VFV26_05520"
                     /inference="COORDINATES: protein motif:HMM:NF017482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT RNA binding domain-containing protein"
                     /protein_id="HEX4845658.1"
                     /translation="VVVDGFEVLIGKGDAENDQLTFKVADNTDFWMHVASVPGSHVVI
                     RNPDKLSELPRNVLERAAELAAYHSKARDGGKVEVHLARIADISKPRGYAPGKVILKK
                     WTGIRVYPKP"
     gene            complement(441..959)
                     /locus_tag="VFV26_05525"
     CDS             complement(441..959)
                     /locus_tag="VFV26_05525"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX4845659.1"
                     /translation="MTSRDHITITSQSILWVAGVGVGLLTLAFVLGVQVGKQSAALRR
                     PAQRGVEDELKDLPEPLLDQLKIFEGEGPDKFVPTPRVDATAPKAEPKVEAKAPEGEA
                     WTLQLVATADAAEAKRTADKAKAAGFATTTLKDKGQLKVRLAKPADRAAMDKAAEKLK
                     KAGFKPFAVKAD"
     gene            complement(956..2032)
                     /locus_tag="VFV26_05530"
     CDS             complement(956..2032)
                     /locus_tag="VFV26_05530"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX4845660.1"
                     /translation="MNHPDDLVITGLGLVLPCGDGIESARASLASGEPCFADLPEALG
                     RGRGAACLSFNPAGIIPPMQLRRLDRTSRFAWVAAHQAFADAGLDPKEWGDRMAVAVG
                     TMSGGSEASEAFMRPYLQRGPEGASPLLFPNSVANAASGHLALAFGLRGPSATFVDRE
                     NAAFTALEQAARWLRMGLADAALVLGADGLFPLLLDVCGGARLLDRHRDPEAGSGRGF
                     LPGEGAQAFLLESRAHAEARGIRPRAALRGLASHSTLGADTGALALATDRALGGRPPA
                     RWIGGSNGQSRLDAPEARLAAAHPKWPAPRFPKTLWGEFAGSGGQLLAAALLEPSEQT
                     LVTAPASSGAQFAALLEDVRLDLR"
     gene            complement(2217..>2530)
                     /locus_tag="VFV26_05535"
     CDS             complement(2217..>2530)
                     /locus_tag="VFV26_05535"
                     /inference="COORDINATES: protein motif:HMM:NF014819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ACP synthase"
                     /protein_id="HEX4845661.1"
                     /translation="GAECLAIRRALGAAADAVSVTSTKSQFGHTLGAAGALGAAAAIL
                     ALRDQVVSPTLRLEEPDPVCDLDCTPLVAKQRQVRTALVNAFAFGGNNVSLLLARWSG
                     S"
BASE COUNT          401 a          833 c          937 g          359 t
ORIGIN      
        1 gtggtggtgg acggcttcga ggtgctcatc ggcaagggcg acgctgaaaa cgaccagctc
       61 accttcaagg tggccgacaa cacggatttc tggatgcacg tggccagtgt gcccggcagc
      121 cacgtggtga tccgcaatcc cgacaagctg agcgagctgc cccggaacgt gctggagcgc
      181 gccgccgagc tggccgccta ccacagcaag gcccgggacg gcggcaaggt ggaggtccac
      241 ctcgcccgca tcgccgacat cagcaagccc cgcggctacg cccccggcaa ggtgatcctc
      301 aaaaagtgga caggcatccg cgtctatccc aagccgtgac ctgaatcgaa gacgggcgga
      361 tggggcgcga gcggtgtctc gcgtatcgcc acaggcgata ccgagaggaa gtggattggc
      421 atccgcgtct atccgaagcc ttagtccgcc ttcacagcga agggcttgaa cccggccttc
      481 ttcagtttct ccgcggcctt gtccatggcg gcgcggtcgg cgggtttggc gagacgcacc
      541 ttcagctggc ccttgtcctt cagggtggtg gtggcgaagc ctgcggcctt ggccttgtcg
      601 gcggtgcgct tggcctcggc ggcatcggcg gtggccacga gctggagggt ccaggcctcg
      661 ccctccggcg ccttcgcctc cactttgggc tcggccttgg gtgccgtggc atccacccgg
      721 ggggtcggca cgaacttgtc ggggccctcg ccctcgaaga tcttgagctg gtccagcagg
      781 ggctcgggca ggtccttcaa ctcgtcctcg acgccccgct gggccgggcg gcgcagggcg
      841 gcgctctgct tgcccacctg cacgcccagc acgaaggcca gggtcagcag ccccacgcca
      901 acacccgcca cccagaggat ggattggctg gtgatggtga tgtggtcgcg ggaggtcatc
      961 gaaggtccag cctaacgtct tcgaggagcg ccgcgaactg ggccccggaa ctggcggggg
     1021 cggtgacgag ggtctgctcc gaaggctcca gcagggccgc ggccagcagc tggccgccgg
     1081 aaccagcgaa ttcgccccag agggtcttcg ggaagcgggg ggcgggccac ttcggatggg
     1141 cggccgccag gcgggcctcg ggggcatcca ggcgggactg gccgttgctg cccccgatcc
     1201 agcgcgccgg gggcctcccg cccagggccc ggtccgtggc gagggccagg gccccggtgt
     1261 cggcacccag ggtggaatgg ctggcgaggc cccgcagcgc ggcccggggc cggatcccgc
     1321 gggcctcggc gtgggcgcgg gattccagca ggaaggcctg ggcgccctcg cccggcagga
     1381 agccccgccc ggatccggcc tctggatcac ggtgccggtc cagcaggcgg gctccgccgc
     1441 agacatccag cagcaggggg aaaaggccat ccgcgccaag caccagggcc gcatcggcga
     1501 ggcccatgcg cagccagcgg gcagcctgct ccagggccgt gaaggcggcg ttctcccggt
     1561 ccacgaaggt ggcgctggga ccgcggaggc cgaaggccag ggccaggtgt ccgctggcgg
     1621 cgttggccac ggagttgggg aacagcagcg gagaggcgcc ttcgggtccc cgctggaggt
     1681 aggggcgcat gaaggcctcg ctggcttcgc tgccgccgct catggtgccc acggccacgg
     1741 ccatgcggtc gccccattct ttcgggtcga ggcccgcgtc cgcgaaggcc tggtgggccg
     1801 cgacccaggc gaagcgggag gtccggtcca ggcgccgcag ctgcatgggc gggatgatgc
     1861 ccgcggggtt gaaggacagg caggcggcgc cccggccgcg gcccagggct tccggcaggt
     1921 ccgcgaagca gggctcgccc gaggcgaggc tggcccgggc ggactcgatc ccatccccgc
     1981 agggcagcac caggcccagg cccgtgatga cgagatcgtc aggatggttc atgaaggttt
     2041 gcattcaaaa ataaaagaac accaccaaga caccaaggca ccaagaaaga caaaagaagg
     2101 gcctgcagtt cttctcggta tccacgatgc ggatacacga gacagacaga aacttggtgg
     2161 tcttggtgtc ttggtggtga aattgctttg ccactcgggc cggacgaatg tcggtgtcat
     2221 gagccactcc accgggccag caggaggctc acgttgttgc cgccgaaggc gaaggcgttc
     2281 acgagggccg tgcggacctg ccgttgcttc gccaccaggg gcgtgcagtc caggtcgcag
     2341 acgggatccg gttcctccag gcgcagggtg gggctcacca cctggtcgcg cagggccagg
     2401 atggcggcgg cggcacccag ggccccggca gcgcccaggg tgtggccgaa ctggctcttg
     2461 gtgctggtga cggaaaccgc atcggcggcg gcgcccaggg cccggcggat ggccaggcat
     2521 tcggcgccgt
//
LOCUS       DASUDT010000271         5326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_919203, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000271 DASUDT010000000
VERSION     DASUDT010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919203"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VFV26_05540"
     CDS             complement(<1..233)
                     /locus_tag="VFV26_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="HEX4845662.1"
                     /translation="MHINELLTVVCEQGASDLHLKVGNHPIARIRGKLTAMTQFKRLV
                     QEDTIAMAYAIMASDKQKAKFKESLDLDLAYSVP"
     gene            377..2203
                     /gene="typA"
                     /locus_tag="VFV26_05545"
     CDS             377..2203
                     /gene="typA"
                     /locus_tag="VFV26_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX4845663.1"
                     /translation="MTPLEKIRNLAIIAHVDHGKTTLVDALFKGAHMFRDNQRVQERA
                     MDSNDQERERGITILAKTTSLHWGGYRFNIVDTPGHADFGGEVERVLSMVDSVLLVVD
                     AFDGPMPQTKFVTRKALALGLRPIVVINKVDRPGARPVWAQDQVFELLIELGATEEQL
                     DFPCVFASAKMGYAMLDMNDASDSLDPLFDSIVKHCPHPTGSPEAPLQMLVTLMDWSD
                     FVGQIGIGRIVNGRIHVGDSVGLVKRDGSIQQQKITQLYGFEGLTRVNLTEASAGEIV
                     AIAGIADIRVGETIADASNPTALEYVDIDEPTISMMFMVNAGPFAGQDGKHVQSRRIR
                     ERLQKELQHNVALRVEDTESPDSFKVSGRGELHLSVLIETMRREGFELCVSRPEVILH
                     IDPVTGEKMEPYEDVTIDIPEAYMGVTMEHMGNRKAEMQDMGNEGGRLRLHFKIPSRG
                     LIGFRSEFMTDTRGEGIIHSLFSHYGPHKGDLPGRKNGVLISMEQCESVGFALMNLEE
                     RGVIFIHPGTKCYEGMIVGEHARENDLVVNVAKGKKLSNMRASGSDEATRLTPPREHT
                     LEQALEYIEADELVEVTPNFIRMRKRVLDTNERKKVEKRSDA"
     gene            2283..2915
                     /locus_tag="VFV26_05550"
     CDS             2283..2915
                     /locus_tag="VFV26_05550"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX4845664.1"
                     /translation="MSSLGLAAATGLALLGLPWAHRLRQVLKGTAGDEPRSADAILVL
                     GRRLVDDWLTPVFQARLLHAEALWRQGLAPRIFVAGGTTGSARRSEAEAAREWLLARG
                     IPPQAIFVEDRSQHTLENLFNVRIQLRREGWRTLLLVSDPLHLARAKATAQGLDLEVR
                     CSPAPDCLPHPGSLRWWERALQEAFLLHWYHTGMAYSRLVRSERQLERVT"
     gene            2987..3826
                     /gene="rsmI"
                     /locus_tag="VFV26_05555"
     CDS             2987..3826
                     /gene="rsmI"
                     /locus_tag="VFV26_05555"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX4845665.1"
                     /translation="MILVPTPIGNMGDLTDRAKEALAGADLVACEDTRRTGGLLKHLG
                     IEKPLLRFDDHAGAAAYERMGLELASGRTVAYCSDAGMPGINDPGFEIARAARAAGAK
                     VTVLPGASAVLLAVVASGLPCHAFSFWGYLPNRSEPRRTLLKKLGAEEETVVVFETPH
                     RIHETLADLEALLPDREIALGRELTKLHETWYRGTPAQVKVQLGREDRGEMVLVLAGA
                     SAKRTVTEVEAGFDGLELPDWAKAFLAAAREGGMTQREAVKPLAKHLGVSASEIYRLA
                     TEV"
     gene            complement(3833..4717)
                     /locus_tag="VFV26_05560"
     CDS             complement(3833..4717)
                     /locus_tag="VFV26_05560"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4845666.1"
                     /translation="MTGHGNSVRGAALVALAALLWSSSGLFIKVLPLGALQIAFARSL
                     VAALTIAVVVKLRGGRPFPRPDALALACAATYAGVLIFFVAATKLTTAANAIFLQFSA
                     PIYLVFLEPWLAGRRVAGRDLAAVAVCLGAMGLFFIGRLGAGTLIGNLLGMASGLCLA
                     LFSLTLKLQRDRRSGADPIGAIILGNLLVAVLCAPMALRGFQPSLGQAGILLYLGVFQ
                     IGIAYLFFNAGMKHLSATAAVVTGTLEAVLNPIWVFLGIGERPSAWALLGGTLILGTI
                     VWYSLPSSARRRFQAARH"
     gene            complement(4741..>5326)
                     /locus_tag="VFV26_05565"
     CDS             complement(4741..>5326)
                     /locus_tag="VFV26_05565"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4845667.1"
                     /translation="GPGRGLGRPARGPGAQRPPPSSGSGGLAGPGTRGDAPTALLLRV
                     HLGHCPACRDVHGGDAAIPPGGPAGAGPLAALQPHLPPPDQWRWTRRGLGGAQVARVL
                     QDPATGATLNLARLPGGLSMPTHHHGGLELSLVLSGTLQDGPARLEPGDWLACGPGQQ
                     HGPTAGPGTECWALLRIEGGIRFTGWRRALGAVG"
BASE COUNT          886 a         1851 c         1857 g          732 t
ORIGIN      
        1 ggcaccgagt aggcgaggtc caggtcgagg ctctccttga acttggcctt ctgcttgtcg
       61 ctggccatga tggcgtaggc catggcgatg gtgtcttcct gcaccagccg cttgaactgg
      121 gtcatggcgg tcagcttccc ccggatgcgg gcgatggggt ggttgccgac cttgaggtgg
      181 aggtcgctgg cgccctgctc gcagaccacg gtgagcagtt cgttgatgtg catggaatct
      241 cccggcttgg gtccgcttat cttagacccc tgggccgtga aaggaagggc cttgcaatcc
      301 ctgctcggaa aacacgggaa tctctggtaa aatctatggt tctgcccggc ccgtgcctgg
      361 gctgcccggg agccagatga cccccctcga gaagatccgc aatcttgcca tcatcgccca
      421 tgtcgaccac ggcaaaacca ccctcgtaga cgccctgttc aagggcgccc acatgttccg
      481 ggacaaccag cgcgtccagg aacgcgccat ggacagcaat gaccaggagc gcgagcgcgg
      541 catcaccatt ctcgccaaga ccacctccct gcactggggc gggtaccgct tcaacatcgt
      601 ggacaccccc ggccacgccg acttcggcgg cgaggtggag cgggtgctca gcatggtgga
      661 ttccgtgctg ctggtggtgg acgccttcga cgggcccatg ccccagacca agttcgtgac
      721 ccgcaaggcc ctggcgctcg gtttacgccc gattgtcgtc atcaacaagg tggaccgccc
      781 cggcgcccgc cccgtgtggg cccaggacca ggtcttcgag ctgctcatcg agctgggcgc
      841 cacggaggag cagctggatt tcccctgtgt cttcgccagc gccaagatgg gctacgccat
      901 gctggacatg aacgacgcca gcgacagcct ggatcccctc ttcgacagca tcgtgaagca
      961 ctgcccccat cccacgggca gccccgaggc gcccctccag atgctcgtga ccctcatgga
     1021 ctggagcgac ttcgtgggcc agatcggcat cggccgcatc gtgaacggcc gcatccacgt
     1081 gggcgacagc gtgggcctcg tcaagcgcga cggctccatc cagcagcaga agatcaccca
     1141 gctctacggt ttcgaggggc tcacccgcgt caacctcacg gaggccagcg ccggcgagat
     1201 cgtcgccatc gcgggcatcg ccgacatccg cgtgggcgag accatcgcgg acgcgtcgaa
     1261 ccccacggcc ctggaatacg tcgacatcga cgagcccacc atctccatga tgttcatggt
     1321 gaacgccggt cccttcgcgg gccaggatgg caagcacgtc cagagccgcc gtatccgcga
     1381 gcgcctccag aaagagctcc agcacaacgt ggccctgcgc gtggaggaca cggagagccc
     1441 cgattccttc aaggtgagcg gccgcggcga gctgcacctc tccgtgctca tcgagaccat
     1501 gcgccgcgag ggcttcgagc tctgcgtgag ccgccccgaa gtgatcctcc acatcgatcc
     1561 cgtcaccggc gagaagatgg aaccctacga ggacgtcacc atcgacatcc ccgaggccta
     1621 catgggcgtg accatggagc acatgggcaa ccgcaaggcc gagatgcagg acatgggcaa
     1681 cgagggtggg cgcctgcgcc tgcacttcaa gatccccagc cgcggcctca tcggcttccg
     1741 cagcgagttc atgaccgata cccggggcga aggcatcatc cacagcctct tcagccacta
     1801 cggcccccac aagggcgacc tgccgggccg caagaacggc gtgctcatca gcatggagca
     1861 gtgcgagtcc gtgggcttcg ccctcatgaa cctcgaagag cgcggcgtca tcttcatcca
     1921 tcccggcacc aagtgctacg agggcatgat cgtgggcgaa cacgcccgcg agaacgacct
     1981 ggtggtgaac gtggccaagg gcaagaagct ctcgaacatg cgggccagcg gcagcgacga
     2041 ggccactcgc ctcaccccgc cccgggagca caccctggag caggccctgg agtacatcga
     2101 ggccgacgag ctggtggaag tgacgcccaa cttcatccgc atgcgcaagc gcgtgctgga
     2161 caccaacgaa cgcaagaagg tcgaaaagcg gtcggacgcc tagctatccc gccagcccga
     2221 tgacgcagcc ctacgccgcc ccgcctcgag ccagcttctg gcagaagctt ggtccgggcg
     2281 gggtgtcctc gctgggtctg gccgcggcca cgggcctggc cctgcttggc ctgccctggg
     2341 cccatcgcct gcggcaggtg ctgaagggga cggccggcga cgagccccgg tccgccgatg
     2401 ccatcctggt gctggggcgg cgcctggtgg acgactggct cacaccggtc ttccaggcgc
     2461 ggctgctcca tgccgaagcc ctctggcgcc agggactcgc gccacggatc ttcgtggcgg
     2521 ggggcaccac gggcagcgcc cgccgcagcg aggccgaggc cgcacgggaa tggctgctgg
     2581 cccggggcat ccccccacag gccatcttcg tggaggaccg cagtcagcac acgctggaga
     2641 acctcttcaa tgtgcggatc cagctgcgcc gggagggttg gcgcacgctg ctgctggtgt
     2701 cggaccccct gcatcttgcc cgcgcgaagg ccacggccca gggcctggat ctggaggtgc
     2761 ggtgcagccc cgccccggac tgcctgccgc atcccgggag cctgcgctgg tgggagcggg
     2821 ccctccagga ggccttcctc ctgcactggt accacacggg catggcctat agccggctgg
     2881 tccgcagcga acggcagctg gagcgggtga cttagagtgc cggacaaaac ccccacgggg
     2941 tcctggagcc tccagaggct gccagactaa ggccatggct ggccacttga tcctcgtccc
     3001 cacccccatc ggcaacatgg gcgatctcac ggatcgcgcc aaggaggccc tggccggggc
     3061 cgacctggtg gcctgtgagg acacccgccg cacggggggc ctgctgaagc acctgggcat
     3121 cgagaaaccc ctgctgcgct tcgatgatca tgccggggcc gcggcctacg agcggatggg
     3181 gctggagctg gcctcgggcc gcactgtggc ctactgcagc gacgcgggca tgcccggcat
     3241 caatgatccc ggcttcgaga tcgcccgggc cgcccgggcc gcgggcgcca aggtcacggt
     3301 gctgccgggc gcctcggcgg tgctgctggc ggtggtggcc tcgggcctgc cctgccatgc
     3361 cttcagcttc tggggctacc tgcccaaccg cagcgaaccc cgccgcaccc tgctgaagaa
     3421 gctgggcgcc gaggaggaga ccgtcgtcgt cttcgagacg ccccaccgca tccacgagac
     3481 cctggcggat ctggaggcgc tgctgccgga ccgggagatc gccctgggcc gggagctgac
     3541 caagctgcac gagacctggt accgcggcac gcccgcccag gtgaaggtcc agctgggccg
     3601 cgaggaccgg ggcgagatgg tgctggtgct ggcgggcgcc agcgccaagc ggactgtcac
     3661 cgaagtggag gccggcttcg acggccttga attgccggac tgggccaagg cctttctcgc
     3721 cgccgcccgc gaggggggca tgacccagcg ggaggcggtg aagcccctgg ccaagcacct
     3781 gggcgtgtcc gcctccgaga tctaccgcct ggccaccgag gtctgacgcc ggtcaatgcc
     3841 gggctgcctg gaaccttcgc cgggctgagg aaggcaggct gtaccagacg atggtgccga
     3901 ggatcagcgt gccccccagc agggcccagg ccgagggccg ctcgccgatc cccaggaaca
     3961 cccagatggg attgaggacg gcctccaggg tgccggtcac cacggcggcg gtggccgaga
     4021 ggtgcttcat gcccgcattg aagaacaggt aggcgatgcc gatctggaag acgcccaggt
     4081 agaggaggat gcccgcctgg cccaggctcg gctggaagcc ccgcagggcc atgggtgcgc
     4141 aaaggaccgc caccagcagg ttcccgagga tgatggcgcc gatgggatcc gccccggacc
     4201 gccggtcccg ctgcagcttg agggtgaggg agaagagggc caggcagagg cccgaggcca
     4261 tgcccagcag gtttccgatg agggtgccgg cacccaggcg gccgatgaag aagaggccca
     4321 tggccccgag gcagaccgcc accgccgcga ggtcgcggcc cgccacccgc cgcccggcca
     4381 gccacggctc caggaacacc aggtagatgg gggcggagaa ctggaggaag atcgcgttcg
     4441 ccgcggtggt gagcttggtg gccgccacga agaagatgag cacgccggca taggtggctg
     4501 cgcaagccag cgcgagggca tcgggccggg ggaagggccg cccgccccgg agcttcacca
     4561 ccaccgcgat ggtaagggcc gccaccaggc tgcgggcgaa ggcgatctgg agcgcgccca
     4621 ggggcagcac cttgatgaag agcccgctgg aactccagag cagggccgcc agggccacca
     4681 gggctgcgcc ccgcacgctg ttgccatgtc cagtcatggg tccattggac cacggccggc
     4741 tcagcccacg gcccccaggg cgcggcgcca gcccgtgaac cggatgccgc cttcgatgcg
     4801 gaggagggcc cagcactcgg tccctggacc ggccgtgggt ccgtgctgct gcccggggcc
     4861 gcaggccagc cagtcgccgg gttccaggcg ggcggggccg tcctgcaggg tgcccgacag
     4921 gaccagggac agctccaggc cgccgtgatg gtgggtgggc atgctcaacc cgccgggcag
     4981 gcgggccagg ttcagggtgg cgccggtggc gggatcctgg aggacccggg ccacctgggc
     5041 cccccccagg ccccggcgcg tccagcgcca ttggtccggc ggcggcaagt ggggctggag
     5101 ggcggccagg ggccccgcgc ccgcggggcc gccgggcggg atggccgcat ccccgccgtg
     5161 gacgtcccgg catgcggggc aatgccccag gtgcacccgg agcagcaggg ccgtgggggc
     5221 atccccccgg gttccagggc ccgccaggcc tccgcttccg gatgatggcg ggggccgctg
     5281 ggcacccggc cctcgcgcag ggcggccaag gccccggcca gggcca
//
LOCUS       DASUDT010000272         6023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1559887, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000272 DASUDT010000000
VERSION     DASUDT010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559887"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VFV26_05570"
     CDS             <1..586
                     /locus_tag="VFV26_05570"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEX4845668.1"
                     /translation="PGAVMMAKLLEPETGTPETAGEVKVDIPTHDANVLDAAARGAFE
                     GGQLAFNVAVMLIAFIALIYLLNGLMKAIHPGFSLELVLGAVFKPFAYLMGVPWIEAG
                     QVGSLLGKRMVVNEFVAFLDLGAMTNLSTKARLISTFALCGFANFSSIAIQVGGIGAL
                     VPERRGDLARLGLRAMLAGTLANFLSACIAGILS"
     gene            665..1165
                     /locus_tag="VFV26_05575"
     CDS             665..1165
                     /locus_tag="VFV26_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845669.1"
                     /translation="MARIASLILVPVLSSVALMAGDYDAVLDAMKKAWPQVETVAVVC
                     DANGSKSALGTLTGAAGGLKVIVVDVKGPQDIGKAVATLASRRPDAMLLLAGDRVAGD
                     GSSAASFLIQRMAAIKIPTAATTEAGVKQGAALGIGPGTGGKLMSNAKVAAVAGVAVP
                     AGATAL"
     gene            complement(1194..2033)
                     /gene="pssA"
                     /locus_tag="VFV26_05580"
     CDS             complement(1194..2033)
                     /gene="pssA"
                     /locus_tag="VFV26_05580"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEX4845670.1"
                     /translation="MRPRLSPEERRARRQRAMRKSMFVLPSSITMASILCGFSSVVMS
                     INAAGSTPDRYFLWAAGLLVLAGVFDGLDGRVARATNTATEFGVQLDSLADVISFGMA
                     PAILAYRYGFFHLGIHDSHLRAAGWAACFVFTACGALRLARFNVQVGSTDPRYFMGLP
                     IPAGAACVASVIIWHPAPPATVAHAYAFAAELFLVGLLMVSTLRFPSFKKRAGSPRAA
                     MLTSLSIVLLLAMMIVFQQRFFIGFFAAYVVLSLAMNVAWKAGWRGVDPPRDGVEDPE
                     TVH"
     gene            2460..4151
                     /gene="mnmG"
                     /locus_tag="VFV26_05585"
     CDS             2460..4151
                     /gene="mnmG"
                     /locus_tag="VFV26_05585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEX4845671.1"
                     /translation="MGRLIDATGIHFRILNESRGVAVRGPRAQADKVKYRIEARRLLE
                     HTPDMNLRQGTAAAILWREGTRGLRGVELLDGSVLPCDAVVITSGTFLNGRILIGERR
                     LEAGRAGEPASTHLAEQLRSLGLRHRRLKTGTSPRLAKASIDFSRLEVQPGDDPPRPF
                     SFFSAGTPQPQVPCHIVHTTAETEAIVRENLAKSSLYGGHIEGIGPRYCPSIEDKFVK
                     FPDKGRHQIFVEPESLETEEIYLAGLSTSMPPDVQLRMVRSLPGFQAAEILRPGYAIE
                     YDSFDPLQLRQDLSVEGLDGVWFAGQINGTTGYEEAAGQGLLAGINAVRWLREQAPIV
                     LGRDQAYLGVMVDDLVTKGTDEPYRMLTARAEHRLGLACDVADARLLEVAREVGALTA
                     GEMAMVEAKIGRRERLRTQCEAAWATQTSPFGPIAAAAGLRLDAGLSLSDLLRRQHMG
                     PAETDACLAQLEGWADPQVGWNPVWERDLLLFELRYAPYREREARLLEGHRAWDQVRI
                     PSDFRIEHLHGLSREVLEKYALHRPETLGQASRIPGITPTAVALLHLHINNRQGI"
     gene            4228..4704
                     /locus_tag="VFV26_05590"
     CDS             4228..4704
                     /locus_tag="VFV26_05590"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX4845672.1"
                     /translation="MSAVLDFYPTVTPAPAAPRLLKIGQLAARSGLTARNLRFYADAG
                     VFGELPRSPKGYRLFPMEAIQWVRVLKASQAAGFSLDEVQELLRALRQDSAPCAHVRD
                     ALGGKLRVLEGRLAEIQLLVEILRITLGTPDGQSSVLGCNLMETLLAEAERLPQRA"
     gene            4720..4926
                     /locus_tag="VFV26_05595"
     CDS             4720..4926
                     /locus_tag="VFV26_05595"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HEX4845673.1"
                     /translation="MNTQTYRVSGMTCGGCARHVDKAIRATPGVTEVSVDAARGTATV
                     QGEATFEALSAQVAAAGYQLVGPA"
     gene            4946..>6023
                     /locus_tag="VFV26_05600"
     CDS             4946..>6023
                     /locus_tag="VFV26_05600"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX4845674.1"
                     /translation="MGTETYTVTGMTCASCVRHVEKALAATPGVQSASVNLATATATV
                     EGEASFEALAAQVEEAGYGLGRPAPDATVAGAQDDPAPARTRMVVALALTAPMLLAMV
                     PGLDLHLPGWLQAALSAPVVFWTGWGFFLRAGRQARHGQASMDTLIALGSGVAWVFAV
                     VEWLGGAHHLSFETAAALVAFLLTGKYLESRAKSRATDALKELLALAPPTALRLGPDG
                     TVIEVPVSDLRPGDQARVLPGHAVPADGRVTVGQAEVDESMLTGEPLPVPKGPGDGLV
                     AGTVVHGSMLELEIQAVGAQTQLALMAQLVAQAQGSKAPAQDLADRISAVFVPAILGL
                     AVLTLAGWWITTGSLASAWRPAVTL"
BASE COUNT          927 a         2035 c         2145 g          916 t
ORIGIN      
        1 ccccggcgct gtgatgatgg ccaagctcct ggagccggag accgggacgc ccgagaccgc
       61 cggtgaggtg aaggtggaca tccccaccca cgacgccaac gtgctggacg ccgcggcccg
      121 cggcgccttc gagggtggcc agctggcctt caacgtggcc gtcatgctca tcgccttcat
      181 cgcgctcatc tacctgctca acggcctcat gaaggccatc catcctggtt tcagcctgga
      241 gctggtcctg ggcgccgtgt tcaagccctt cgcctacctc atgggcgtgc cctggatcga
      301 ggcgggccag gtgggctccc tgctgggcaa gcgcatggtg gtgaacgagt tcgtggcctt
      361 cctggacctg ggtgccatga cgaatctgtc caccaaggcc cggctgatat ccaccttcgc
      421 cctctgcggc ttcgccaact tcagcagcat cgccatccag gtggggggca tcggcgccct
      481 ggtgcccgag cgccggggtg atctggcccg attgggcctg cgggccatgc tggcgggcac
      541 cctcgccaac ttcctcagcg cctgcattgc cgggatcctg agttagaaaa aatcataaaa
      601 acaactcgat gctccagcga ttccggaatc ctgccgatgg gtaggaatcg ccggaggtca
      661 ttccatggct cgcattgctt ccctgattct ggttccggtc ctctcgtccg tggcgctcat
      721 ggccggggac tacgacgccg tgctggacgc catgaagaag gcctggcccc aggtggaaac
      781 ggtggcggtg gtctgcgacg cgaatggcag caagtccgcc ctgggcacgc tgaccggggc
      841 ggccggcggg ttgaaggtca tcgtggtgga tgtgaaaggc ccccaggaca tcggcaaggc
      901 cgtcgccacg ctggcgagcc gcaggcccga tgcgatgctc ctgctggcgg gcgaccgggt
      961 ggcgggggat ggctcctccg ccgccagctt cctcatccag cgcatggcgg ccatcaagat
     1021 tcccacggcg gccaccaccg aggctggtgt gaagcagggg gcggccctgg gcatcgggcc
     1081 tggcaccggg ggcaagctga tgtccaacgc caaggtggcc gcggtcgcag gcgtggcggt
     1141 tcccgcaggc gccaccgccc tctgatccga ccggggcttt gtcccccttt tccctagtgg
     1201 acggtttccg ggtcctcgac cccgtcccgc gggggatcca cgccccgcca tccggccttc
     1261 caggccacat tcatggcgag gctgaggacc acgtaggcgg cgaagaagcc gatgaagaag
     1321 cgctgctgga agacgatcat catcgccaag agaaggacga tgctgaggct ggtgagcatg
     1381 gcggcgcggg ggctgccagc ccgcttcttg aaactgggga agcggagggt ggataccatc
     1441 agcaggccga cgaggaacag ctctgccgcg aaggcatagg cgtgggccac ggtggccggg
     1501 ggggccgggt gccagatgat caccgaggcc acgcaggcgg cgccggcggg aatgggcagg
     1561 cccatgaagt accgggggtc cgtggagccc acctgcacgt tgaagcgggc caggcgcagg
     1621 gcgccgcagg cggtgaagac gaagcaggcg gcccagcccg cggcccgcag gtgggagtcg
     1681 tggatgccca ggtggaagaa tccgtagcgg taggccagga tggcgggcgc catgccgaag
     1741 ctgatgacgt cggccaggct gtccagctgc acgccgaact ccgtggcggt gttggtggcc
     1801 cgggccaccc ggccgtccag gccgtcgaag acgcccgcca gcaccagcag gcccgcggcc
     1861 cacaggaagt accggtccgg ggtggagccg gcggcattga tggacatgac cacgctggag
     1921 aaaccgcaga ggatcgaagc catggtgatg ctggaaggca gcacgaacat ggatttgcgc
     1981 atggcgcgct gccggcgggc gcggcgttcc tctgggctca ggcggggtcg catggggaca
     2041 gtttctcaca tcccgcacct ccccgggggg cgatggagga gcgggtatcc tggcaggctc
     2101 cggagggcgg cttgaagcac gtggtggtca tcggcggcgg gcatgcggga atcgtcccga
     2161 ctccgcggct ccgcgaagcg gaacgcggga gcaggcgact gaatgtcgcc tgcgatagga
     2221 gggaggcctc gactcccccc atcgaaggcg ggctggaggc cttgcgatga agcaggtgat
     2281 ggtcattggt ggcgggcatg ccgggatcga ggcagcgcac atctgcgccc gcatgggcat
     2341 ggccacgacc ctgctcacca tgaacctgga tcagatcggc cagatgagct gcaatcccag
     2401 catcgggggc gtgggcaagg gccacatggt ccgggaggtc gacgccctgg gggggcgcca
     2461 tgggccgcct catcgatgcc acgggcatcc acttccgcat cctcaacgaa agccgcggcg
     2521 tggccgtgcg cggcccccgg gcccaggccg acaaggtgaa gtaccgcata gaggcccggc
     2581 gcctgctgga acacacgccg gacatgaatc tccgccaggg caccgcggcg gccatcctgt
     2641 ggcgggaggg cacccggggc ctgcgggggg tggaactgct ggacggctcc gtgctgccct
     2701 gcgatgcggt ggtcatcacc agcgggacct tcctcaacgg ccgcatcctc atcggcgagc
     2761 ggcgcctgga ggcgggccgg gccggggagc ccgccagcac ccatctggcg gagcagctgc
     2821 ggagcctggg cctccggcat cgccgcctca agaccggcac cagcccgagg ctggcgaagg
     2881 cctccatcga tttcagccgc ctggaggtcc agcccggcga cgatccgccc cgtcccttca
     2941 gtttcttcag cgctggaacc ccccagcccc aggtgccctg ccacatcgtc cacaccacgg
     3001 cggaaaccga ggccatcgtg cgggagaacc tggcgaagtc gagcctctac gggggccaca
     3061 tcgagggcat cgggccccgc tactgcccct ccatcgagga caagttcgtg aagttcccgg
     3121 acaagggccg gcaccagatc ttcgtggaac cggaaagtct ggagaccgag gagatctacc
     3181 tggcgggcct gtccacctcc atgccccctg acgtccagct gcgcatggtg cggagcctcc
     3241 cgggcttcca ggccgccgaa atcctgaggc ccggctacgc catcgagtac gacagtttcg
     3301 atccgctcca gctgcgccag gacctgtccg tggagggcct cgatggcgtc tggttcgcgg
     3361 gccagatcaa cggcaccacc ggctacgagg aggccgcggg ccaggggctg ctggcgggca
     3421 tcaacgccgt gcggtggctg cgggagcagg cgcccatcgt cctcggccgg gaccaggcct
     3481 acctgggtgt catggtggac gacctcgtca ccaagggcac ggacgaaccc taccgcatgc
     3541 tcacggcccg ggcggagcac cggctgggcc tggcctgcga tgtggcggac gcccggcttc
     3601 tggaggtggc ccgggaggtg ggggctctta ccgccggaga gatggccatg gtggaggcca
     3661 agatcgggcg gcgcgagcgg ctgcggaccc agtgcgaggc cgcctgggcc acccagacca
     3721 gccccttcgg ccccatcgcc gccgccgccg gcctccggct ggatgcgggc ctgagcctgt
     3781 ccgacctgtt gcgccgccag cacatggggc ccgcggagac cgatgcctgt ctggcccagc
     3841 tggagggttg ggccgatccc caggtggggt ggaatcccgt ctgggaacgg gacctgctgc
     3901 tctttgagct gcgctacgcc ccctaccgcg aacgggaggc ccgcctcctg gagggccacc
     3961 gggcctggga ccaggtgcgc atcccatcgg atttccgcat cgagcatctc cacggacttt
     4021 ccagggaagt attggaaaaa tatgccttgc accgtcccga aaccctgggg caggccagcc
     4081 ggatccctgg catcaccccg accgccgtgg cccttctgca cttgcacatt aacaaccgtc
     4141 agggcatata gttttttgtg attttatcct tgagcctcca tgtaactgga ggcttaatct
     4201 ggggccgttc gccttcggga ggtccccatg tcggctgtcc tagacttcta tcccacggtc
     4261 accccggcgc ctgcggcgcc gcgcctgctg aagatcgggc agctggcggc ccgttcgggg
     4321 ctcacggccc ggaacctgcg tttctacgcg gatgcggggg tgttcgggga actgccccgg
     4381 tcccccaagg gctatcgcct ctttcccatg gaggccatcc agtgggtgcg ggtcctgaag
     4441 gcctcccagg ccgcgggctt cagcctggat gaagtgcagg agctgctgcg ggccctgcgc
     4501 caggacagcg ctccctgtgc ccatgtgcgg gacgccctgg gcggcaagct ccgcgtcctg
     4561 gaagggcggc tggcggagat ccagctgctg gtggagatcc tccggatcac gctggggacg
     4621 cccgatggcc agagcagcgt cctgggctgc aacctgatgg aaaccctgct ggcggaagcc
     4681 gagcggctgc cccagcgggc ctgaacccga ggagatccca tgaacaccca gacctaccgc
     4741 gtgagcggca tgacctgcgg cggctgcgcc cgccacgtcg acaaggcgat ccgcgcgacc
     4801 cccggcgtca cggaggtttc ggtggacgcg gcccggggaa cggcgaccgt gcaaggggag
     4861 gccaccttcg aggcgctctc ggcccaggtg gcggcggcag gctatcagct ggtgggaccg
     4921 gcctagcccg gttccggagg ttcccgtggg caccgaaacc tacaccgtca ccggcatgac
     4981 ctgcgcctcc tgtgtgcgcc acgtggagaa ggcgctggcg gcgacgcccg gcgtgcaatc
     5041 ggccagcgtg aacctggcca ccgccacggc cactgtggag ggcgaggcgt cgttcgaagc
     5101 gctcgccgcc caggtggagg aggcgggcta cgggctggga cgcccagcgc cggatgccac
     5161 ggttgccggg gcccaggatg atccggctcc cgcgcgcacc cggatggtcg tggccctcgc
     5221 cctcacggcc cccatgctgc tggccatggt cccgggcctg gacctccacc tgcccggatg
     5281 gctccaggcc gcgctgtcag cgccggtggt gttctggacc ggctggggtt tcttcctgcg
     5341 ggcgggccgc caggcccggc atggccaggc ctccatggac accctcatcg ccctggggtc
     5401 cggtgtggcc tgggtctttg cggtggtgga atggctgggg ggcgcccacc acctcagctt
     5461 cgaaaccgcc gccgcattgg tggccttcct gctcaccggc aagtacctgg agagccgggc
     5521 caagtccagg gccacggatg cgctcaagga gctcctggcc ctggcgcccc ccacggccct
     5581 tcgacttgga ccggatggca ccgtgatcga ggtgcccgta tctgatctcc gccctgggga
     5641 ccaggcccgc gtgctgccgg gccacgcggt gcctgcggat ggccgcgtga ccgtgggcca
     5701 ggcggaagtg gacgaatcca tgctcacggg cgagccgctg cccgtgccca agggccccgg
     5761 cgatggcctg gtggcgggca ccgtggtgca cggctccatg ttggaactgg agatccaggc
     5821 cgtgggggcc cagacccagc tggccctcat ggcgcagctg gtggcccagg cccagggctc
     5881 caaggccccc gcccaggatc tggcggaccg catcagcgcc gtgttcgtac cggccatcct
     5941 ggggttggca gtcctcaccc tggcgggctg gtggatcacc acgggctccc tggcctcggc
     6001 ctggcgcccg gcggtgacgt tgc
//
LOCUS       DASUDT010000273         2762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_521706, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000273 DASUDT010000000
VERSION     DASUDT010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521706"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VFV26_05605"
     CDS             complement(<1..221)
                     /locus_tag="VFV26_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845675.1"
                     /translation="MNQLADLIRRYDRPGPRYTGYPMPPAWSDDFPEPEVLAALDRAN
                     ASTDEALSLYLHIPFCPRRCAYCGCNVVV"
     gene            complement(339..1325)
                     /gene="hemE"
                     /locus_tag="VFV26_05610"
     CDS             complement(339..1325)
                     /gene="hemE"
                     /locus_tag="VFV26_05610"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX4845676.1"
                     /translation="MQPLLHVLNGNALDKPPVWFMRQAGRFLPEYREVRAKVTFEQLL
                     NDSDLAAEVTLQPIRRFPQIDGAIIFSDILVILDALGCEVTIPEGGPRIGKTLDQIDI
                     NRPLDEKVFEPVCNAIRKVKANLPEKVTMLGFAGAPWTLLAYGIEGKGSKSWSKAKAF
                     IHQNPVLAQKWMDKLADAAARLLNLHIEAGAQGVQLFDTWAGELDADDYATFALPSVE
                     RTLSQVTAAPTLFFARTGYLPDSLNNLPCKGLAVPWQVPISEARRRFPKMVLQGNLDP
                     VALLAGKETATRKARAIVDAMKGHPHIFNLGHGLTPETDPAVVAAVLDEVKA"
     gene            complement(1455..2708)
                     /locus_tag="VFV26_05615"
     CDS             complement(1455..2708)
                     /locus_tag="VFV26_05615"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEX4845677.1"
                     /translation="MSNDTLFQEALTHFPGGVSSPVRAFRAVGGTPKFFKKASGAWFE
                     DEDGQTFLDLCMSWGPLILGHAHPDILAAVNEAMQEGLTFGAPSRRELALARRIKEMV
                     PFIEKMRFVSSGTEAVMSALRAARGFTGRERILKFEGCYHGHSDGLLVKAGSGLVTFG
                     APTSAGVPKAIAELTSVVTLDDMETLERTFAEIGNELAAAIIEPIPANNGLLLQRPEF
                     LKRLRELCTKHGVVLIFDEVISGFRVAPGGAAERLGITPDMGTYGKIIGGGMPVGLYG
                     GRKDIMGVVAPDGPVYQAGTLSGNPVAMAAGLATMEKLTPAFYAGLEANAAQWAAAFE
                     TIPGLHCPRYGSLLWPLFQDGVRRSDAVKGEAIGTFNKLHKALLGQGVYLPPSGYEVA
                     FLGAAHGEPELAHFQQAVAAVAKDF"
BASE COUNT          455 a          847 c          999 g          461 t
ORIGIN      
        1 ctcaccacca cgttgcagcc gcagtaggcg cagcggcggg ggcagaaggg gatgtgcagg
       61 tagagcgaca gggcctcgtc cgtactggcg ttggcgcggt ccagggccgc gaggacctcg
      121 ggctccggga agtcgtcgga ccaggccggc ggcatgggat agcccgtgta gcgcgggccg
      181 ggccggtcgt agcggcggat caaatcagcg agctggttca tgggagggtc cgatcaaatc
      241 cagggggaac tgattaccac caaggcacca agacaccaag agctgcctga gaagttgttt
      301 tgtccttctt ggtgccttgg tgtcttggtg gtgatttttc aggcttttac ttcatcgaga
      361 accgccgcca ccacggcggg atcggtctcg ggggtgaggc cgtggccgag gttgaagatg
      421 tgggggtggc ccttcatggc gtccacgatg gcgcgggcct tccgcgtggc ggtttccttg
      481 ccggccagca gcgccacggg gtccaggttg ccctggagca ccatcttggg gaagcggcgc
      541 cgggcctcgc tgatgggcac ctgccagggc accgccagcc ccttgcaggg gaggttgttg
      601 agcgagtccg gcaggtagcc cgtgcgggcg aagaacaggg tcggcgcggc cgtcacctgg
      661 gagagggtgc gctccacgga aggcagcgcg aaggtcgcgt agtcgtcggc gtccagctcg
      721 ccggcccagg tgtcgaagag ctgcacgccc tgggcgccgg cctcgatgtg caggttcagc
      781 aggcgggcgg cggcgtccgc cagcttgtcc atccacttct gggccagcac gggattctga
      841 tggatgaagg ccttggcctt ggaccagctc ttgctcccct tcccttcgat gccgtaggcc
      901 agcagggtcc agggtgcgcc ggcgaagccg agcatggtga ccttctcggg caggttggcc
      961 ttcaccttgc ggatggcgtt gcagacgggc tcgaagacct tctcgtccag gggacgattg
     1021 atgtcgatct ggtccagcgt cttgccgatg cgggggccgc cctcaggaat ggtgacctcg
     1081 cagcccaggg catccaggat caccaggatg tcgctgaaga tgatggcgcc atcgatctgg
     1141 gggaagcggc ggatgggctg gagcgtcact tccgccgcca ggtccgaatc gttgagcagc
     1201 tgctcgaagg tcaccttggc ccgcacttcg cggtactcgg gcaggaaacg cccggcctgg
     1261 cgcatgaacc agaccggggg cttgtcgagg gcattgccgt tgagcacatg aagaaggggc
     1321 tgcatgagaa ctccaaatag gaaatgcgag ggtccacaga ttccacagat ttcacagatt
     1381 agaaaagctg gtggagcaag aagccatcaa gaactgcgac caatgaatct gtgtgaatct
     1441 gtgaaatctg tggatcaaaa atctttcgcc acggcggcca cggcctgctg gaagtgggcc
     1501 agctcgggct cgccgtgggc ggcgccgagg aaggccactt cgtagccgct ggggggcagg
     1561 tagacaccct gccccagcag ggccttgtgc agcttgttga aggtgccgat ggcctcgccc
     1621 ttcaccgcat cgctgcggcg cacgccgtcc tggaacagcg gccagagcag gctgccgtag
     1681 cggggacagt ggaggccagg aatcgtttcg aaggccgcgg cccactgggc cgcgttggct
     1741 tccagacccg cgtagaaggc cggagtcagc ttctccatgg tggcgaggcc cgcggccatg
     1801 gccacgggat tgcccgacag ggtgcccgcc tggtacaccg ggccgtccgg agccaccacg
     1861 cccatgatgt ccttgcggcc gccgtagagg cccacgggca tgccgccgcc gatgatcttg
     1921 ccgtaggtgc ccatgtccgg cgtgatgccc aggcgctccg ccgcgccgcc gggggccacg
     1981 cggaagccgc tgatgacctc gtcgaagatg aggaccacac cgtgcttggt gcacagctct
     2041 cgcagccgct tgaggaactc ggggcgctgg agcagcaggc cattgttggc ggggatgggc
     2101 tcgatgatgg ccgcggccag ctcgttcccg atctcggcga aggtgcgctc cagggtctcc
     2161 atgtcatcca gcgtcaccac ggaggtcagc tcggcgatgg ccttgggcac gcccgcgctg
     2221 gtgggggcgc cgaaggtgac gaggccggag ccggccttca ccagcaggcc gtcgctgtgg
     2281 ccgtggtagc agccctcgaa cttcaggatg cgctcccggc ccgtgaagcc gcgggccgcg
     2341 cgcagggccg acatgacggc ctcggtgccc gaggacacga agcgcatctt ctcgatgaag
     2401 ggcaccatct ccttgatgcg gcgggccagg gccagctcgc ggcggctggg ggcgccgaag
     2461 gtgaggccct cctgcatggc ctcgttcacg gccgccagga tgtcggggtg ggcgtggccc
     2521 aggatcagcg ggccccagga catgcagagg tcgaggaacg tctgaccgtc ctcgtcctcg
     2581 aaccaggcgc cactggcctt cttgaagaac ttgggcgtgc cgcccacagc gcggaaggcc
     2641 cgcacggggc tggagacgcc gccggggaag tgcgtcaggg cttcctggaa gagggtgtcg
     2701 ttgctcacga gatccagcct ttctccacgg cctcgcggcc ggcgtaggtg acgatcatgt
     2761 cg
//
LOCUS       DASUDT010000274         2133 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1692578, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000274 DASUDT010000000
VERSION     DASUDT010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692578"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..645)
                     /gene="miaE"
                     /locus_tag="VFV26_05620"
     CDS             complement(52..645)
                     /gene="miaE"
                     /locus_tag="VFV26_05620"
                     /inference="COORDINATES: protein motif:HMM:NF017939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045301 -
                     tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl
                     adenosine)-hydroxylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase
                     MiaE"
                     /protein_id="HEX4845678.1"
                     /translation="MTPFKAPLALRAATPSGWAAAALADPEALLSDHAHCEKKAALTA
                     LNLAKHLGDTPHAPALLARLADEELDHYRRVLEGLQLFGWTLLPDRGNAYAQALHRLA
                     SKGLLDQLLIAAVIEARSCERLWLLEQAAAAHPTLGHAPWLAFLLELERCEAGHALAY
                     RSLAEEKFGAAALARLEWWLDREAEVICAVPWRSAVH"
     gene            complement(642..1490)
                     /locus_tag="VFV26_05625"
     CDS             complement(642..1490)
                     /locus_tag="VFV26_05625"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4845679.1"
                     /translation="MVLLLIVSVIWALSFGLTAQVSGLGAPFVTAARTVLAALVFLPF
                     LDLKGMPPRRVLAFAGIGALQFGLMYLLYIASFRWLRPSEVALFTIFTPLFVTLVDDL
                     LEGRMSWLFLLTAALAVLGTGICVWSGLGRGGMIRGFLLMQAANLCFALGQVLYRRAA
                     PASGRRDRDLMGLLYLGASVVAVAAAAPSISWGQVAAMTLRQGAVLLYLGVVASGLGF
                     FLFNAGARRTDIGTLAIFNNMKIPLAILASGLVFREAVDWPRLAAGGAVIACALGLNH
                     LMGGRP"
     gene            complement(1509..>2133)
                     /locus_tag="VFV26_05630"
     CDS             complement(1509..>2133)
                     /locus_tag="VFV26_05630"
                     /inference="COORDINATES: protein motif:HMM:NF022188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2520 domain-containing protein"
                     /protein_id="HEX4845680.1"
                     /translation="FTLLGRGRAGRALAAAWGPRAALLDHGARPQGLVILAVPDRAVA
                     ELAAEFPGRCIHLAGSLHLPGVPCAHPLTSFDGEARDWTATPLAITGLVPDEFRRAFG
                     DLGFAAFDLPAELKPLYHAAAVLTSGHAATLWLGAAALLRAQGVALPGRGLLPLAEAT
                     LRNVATRGTAGRTGPFERGDEPTIARDAEALPEPWREIFLKLGRSLD"
BASE COUNT          350 a          778 c          774 g          231 t
ORIGIN      
        1 gatgccacgg cctaccagcg gtcagaagac ctaatgggat ttttaggcac gctaatggac
       61 tgccgaccgc cagggcacgg cgcagatcac ctccgcctcg cgatccagcc accactccag
      121 ccgggccagg gccgccgcgc cgaatttctc ttccgccagg ctgcggtagg ccagggcatg
      181 gcccgcctcg cagcgctcca gctccagcag gaaggccagc cagggcgcat ggcccagggt
      241 cggatgcgcg gcggcggcct gctccagcag ccagaggcgc tcgcagctcc gggcttcgat
      301 gaccgcagcg atgagcagct ggtccagcag gcccttcgaa gccagccggt ggagggcctg
      361 ggcataagca ttgccccggt ccggcagcag ggtccagccg aacagctgga gcccctccag
      421 cacccgccgg tagtggtcca gctcctcgtc ggccagccgc gccagcagcg ccggggcatg
      481 gggggtgtcg cccaggtgct tggccaggtt cagggccgtg agcgccgcct tcttctcgca
      541 gtgggcgtgg tccgacagca gggcctcagg gtccgccagg gccgctgcgg cccagccgga
      601 aggggtcgcg gcccgcagag ccaggggtgc cttgaacggg gtcatggccg gcctcccatg
      661 agatggttca gccccagggc gcaggcgatg acggcgccgc cggcggccag cctcggccag
      721 tccacggcct cccggaacac caggcccgaa gccaggatgg ccagggggat cttcatgttg
      781 ttgaagatgg ccagggtgcc gatgtccgtc cggcgggccc cggcattgaa gaggaagaag
      841 cccaggcccg aggccaccac gccgaggtag aggagcacgg ccccctggcg cagggtcatg
      901 gcggccacct ggccccagga gatggacggc gcggccgcgg ccaccgccac caccgaggct
      961 cccaggtaga gcaggcccat gaggtcccgg tcccgcctgc ccgaggccgg ggccgcgcgg
     1021 cggtagagca cctgccccag ggcgaagcag aggttggccg cctgcatcag gaggaacccg
     1081 cggatcatcc ccccgcgccc cagccccgac cagacgcaga tgcccgtgcc cagcacggcc
     1141 agggccgccg tgaggaggaa cagccaggac atccgccctt ccaacaggtc gtccaccagc
     1201 gtcacgaaca ggggcgtgaa gatggtgaac agggccacct ccgaaggccg cagccaccgg
     1261 aacgatgcga tgtagagcag gtacatgagc ccgaactgga gggccccgat gcccgcgaag
     1321 gccagcaccc gcctcggcgg catgcccttc agatccagga aggggaggaa caccagggcc
     1381 gccaggaccg tccgcgccgc cgtgacgaag ggcgccccca ggccgctcac ctgggccgtg
     1441 aggccgaagg acagggccca gatgaccgag acgatgagca gcaggaccat ggggctccgg
     1501 aggagggatc agtcgaggct tcgccccagc ttcaggaaga tctcgcgcca tggctccggc
     1561 agcgcctccg cgtcccgggc gatggtgggc tcgtcgcccc gctcgaaggg cccggtgcgc
     1621 cccgcggttc cccgggtggc cacgttgcgc agggtggctt ccgccagggg cagcaggccc
     1681 cgccccggca gcgccacgcc ctgggcccgc aggagggccg cggcccccag ccacagcgtg
     1741 gccgcatggc cggaggtgag caccgccgcc gcatggtaga gcggcttgag ttccgccggc
     1801 aggtcgaagg cggcgaagcc caggtccccg aaggcccgcc ggaactcatc gggcaccagg
     1861 ccggtgatcg ccagcggcgt ggccgtccag tcccgggcct cgccatcgaa gctggtgagg
     1921 ggatgggcgc agggcacgcc cggcagatgg aggcttccgg ccagatggat gcagcgcccg
     1981 gggaactccg ccgccagttc cgccacggcc cggtccggca ccgccaggat caccagcccc
     2041 tgcggcctcg cgccgtgatc cagcagcgcc gcccgggggc cccaggccgc cgccagcgcg
     2101 cggccggccc ggccgcggcc aaggagggtg aat
//
LOCUS       DASUDT010000275         3072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2068008, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000275 DASUDT010000000
VERSION     DASUDT010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068008"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="VFV26_05635"
     CDS             complement(<1..632)
                     /locus_tag="VFV26_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX4845681.1"
                     /translation="MARQTPLERYRNIGIMAHIDAGKTTTTERILFYTGKIHKIGEVH
                     EGAATTDWMVQEQERGITITSAAITAAWTPQTGQLKDVEHRINIIDTPGHVDFTAEVE
                     RSLRVLDGACAVFCAVGGVEPQSETVWRQADKYGVPRMAFVNKMDRPGADFFRVVEMM
                     KTRLKARPMPIQIPIGAEEDFKGVVDLVLMKALTFDEGDKGFKVLYSEIPA"
     gene            complement(725..1195)
                     /gene="rpsG"
                     /locus_tag="VFV26_05640"
     CDS             complement(725..1195)
                     /gene="rpsG"
                     /locus_tag="VFV26_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEX4845682.1"
                     /translation="MARRSAPAKREILPDPVYNSLVVSKFVNILMERGKKATAERILY
                     GALEIVAKKSGEEALEAFQKALNNIKPAVEVKSRRVGGATYQVPVEVPQNRRQSLAMR
                     WLKTYSASRGERTMRDKLAGEILDAMNFRGAAIKKKDDVHKMAEANKAFAHFRW"
     gene            complement(1209..1610)
                     /gene="rpsL"
                     /locus_tag="VFV26_05645"
     CDS             complement(1209..1610)
                     /gene="rpsL"
                     /locus_tag="VFV26_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX4845683.1"
                     /translation="MPTINQLIRLGRKTFQNKTKSPALDACPQKRGVCTRVFTTTPKK
                     PNSALRKVARVRLTNGIECTTYIPGVGHNLQEHSIVLIRGGRVKDLPGVRYHVVRGTL
                     DATGVAGRNQSRSKYGAKRPKAGAAAPAKKK"
     gene            complement(1802..2086)
                     /locus_tag="VFV26_05650"
     CDS             complement(1802..2086)
                     /locus_tag="VFV26_05650"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX4845684.1"
                     /translation="MPLYEYRCEACGQPEEKLESLSAPEAHACPACGAALGMKRQVSV
                     AAFALAGGGWYKGAASEPATPAPKAETAKAESPKSGSGCAAGGCGCPLAG"
     gene            2143..2631
                     /gene="rfaE2"
                     /locus_tag="VFV26_05655"
     CDS             2143..2631
                     /gene="rfaE2"
                     /locus_tag="VFV26_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HEX4845685.1"
                     /translation="MPSLNRFFQSPEGFLAAIPRPRVLCFTNGCFDLIHPGHVQYLAD
                     ARALGDFLVVGLNSDASVARLKGPGRPLQDEAARAAVLLALRSVDAVIRFDEDTPLEL
                     IRALQPDVLVKGGDYTPETVVGRELVESRGGRLALIPFLPGHSTSRIEQRIRSGRGVT
                     LE"
     gene            2727..>3072
                     /locus_tag="VFV26_05660"
     CDS             2727..>3072
                     /locus_tag="VFV26_05660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845686.1"
                     /translation="MRHRVALSLALLALPLAAQDMTGGLQTGLTLPVGDLKDKSGAGT
                     NQFFGAHVGGHLDFNLTSHHQVRGQLTYHELPGSEWGGGFQVDYKILQIGADWVYSFQ
                     SPDQGWYTIAGAS"
BASE COUNT          469 a         1016 c         1031 g          556 t
ORIGIN      
        1 gcggggatct cgctgtagag caccttgaag cccttgtcgc cctcgtcgaa ggtcagggcc
       61 ttcatcagga cgaggtcgac cacgcccttg aagtcctcct cggcgccaat ggggatctgg
      121 atcggcatgg gacgggcctt caggcgggtc ttcatcatct cgaccacgcg gaagaagtcc
      181 gcgccggggc ggtccatctt gttcacgaag gccatgcggg gcacgccgta cttgtcagcc
      241 tggcgccaca cggtctcgga ctggggctcg acgccgccca ccgcgcagaa cacggcgcag
      301 gcgccgtcca gcacgcgcag ggagcgctcc acctcggccg tgaaatccac gtggccgggg
      361 gtgtcgatga tgttgatgcg gtgttccaca tccttcagct ggcccgtctg aggggtccag
      421 gcggccgtga tggcggcgga ggtgatggtg atgccccgct cctgctcctg caccatccag
      481 tcggtggtcg ccgcaccctc atgcacctcg ccgatcttgt ggatcttgcc ggtgtagaag
      541 aggatgcgct ccgtcgtggt ggtcttgccg gcatcgatgt gcgccatgat gccgatgttc
      601 cggtagcgct cgaggggggt ctgacgggcc acagcggcct cctagggggc attgaggatt
      661 caaagaagcg gttcagaaac tccagaaacg gggcgcccgt ggcgccccgt ttctggagca
      721 tgcactacca gcggaaatgg gcaaacgcct tgttggcctc ggccatcttg tggacgtcgt
      781 ccttcttctt gatggcggcg ccgcggaagt tcatggcgtc gaggatctcg ccggccagct
      841 tgtcgcgcat ggtgcgctcg ccacgggagg cggagtaggt cttcagccag cgcatggcca
      901 gggactggcg gcggttctgg ggaacctcca ctggcacctg gtaggtggcg ccgcccacgc
      961 ggcgggactt cacttccacc gcgggcttga tgttgttcag ggccttctgg aaggcctcga
     1021 gggcctcttc gccggacttc ttggcgacga tctcgagtgc accgtagagg atgcgctcgg
     1081 cggtggcctt cttgccgcgc tccatgagga tgttcacgaa cttggagacg acgaggctgt
     1141 tgtagacggg atccgggagg atctcacgct tggcgggtgc ggaacggcga gccatgtttt
     1201 acctccccct acttcttctt ggcgggcgca gcggcgccag ccttggggcg cttggcgccg
     1261 tacttggaac gggactggtt gcggcccgcg acgccggtgg cgtccagggt gccgcgcacc
     1321 acgtggtagc gcacgcccgg cagatccttc acgcggccgc cgcggatgag cacgatgctg
     1381 tgctcctgca ggttgtggcc cacgcccggg atgtaggtcg tgcactcgat gccgttggtg
     1441 aggcgcacac gggccacctt gcgaagcgcg gagttcggct tcttcggggt ggtggtgaac
     1501 acgcgggtgc acacgccgcg cttctgcggg caggcgtcga gcgcggggct cttggtcttg
     1561 ttctggaacg tcttccgccc gaggcggatc aactgattga tggtaggcac accatcctcc
     1621 aaggaaggca ccggtggatc cgggcctggg cccgagaggt tccgctggac aaagggcgtc
     1681 gggggaacgt cggacggatg aaatcctgcg ccggcccacg gggccggaac catctaggct
     1741 agcggaatgg cctcgaaagt caacgcatca actgcgaaat gagccggaca ccgcccatcc
     1801 atcagcctgc gaggggacat ccgcagccgc cggcagcaca gccagaaccg cttttggggg
     1861 actcggcctt ggccgtttcg gctttcgggg cgggggtggc cggctcggaa gccgcgccct
     1921 tgtaccagcc gccgcccgcc agcgcgaagg ccgccacgga gacctggcgc ttcatgccca
     1981 gggcggcccc gcaggccggg caggcatgcg cctcgggcgc ggacaggctc tcgagttttt
     2041 cttcgggctg gccacaagct tcacagcggt attcataaag cggcatggca gacttctcct
     2101 gggaatcgtc cccgaaccta gcagtttatt ctgaagcctt ggatgccgtc actgaaccgt
     2161 ttcttccaga gccctgaagg ctttctcgcc gccatccccc ggccgagggt cctctgcttc
     2221 accaacggct gcttcgacct gatccatccg ggccacgtgc agtatctggc cgatgcccgc
     2281 gccctgggcg atttcctggt ggtcgggctc aacagcgacg cctccgtggc gcgcctcaag
     2341 gggccgggac gccccctcca ggatgaggcc gcccgggccg ccgtcctgct cgccctgcgc
     2401 agcgtggacg ccgtgatccg cttcgacgag gacacgcccc tggagctcat ccgcgccctc
     2461 cagcccgatg tcctggtgaa gggcggcgac tacacgccgg aaaccgtggt ggggcgggag
     2521 ctcgtggaat cccgcggcgg caggctggcc ctcatcccct tcctcccggg ccacagcacc
     2581 tcccgcatcg agcagcggat ccgcagtggg cgcggcgtga cgctcgaata ggcgactccg
     2641 gtagaccctt tggatgatcc ggaaccggcg gaatgcagct acgctgtgac cggccttgtt
     2701 ttaaggtccg tctacccgga ggtttcatgc gtcatcgcgt tgccctatcc ctcgcccttc
     2761 tggccctgcc cctcgccgcc caggacatga ccggcggtct gcagaccggc ctcaccctgc
     2821 ccgtcgggga tctgaaggac aagtccggcg ccggcaccaa ccagttcttc ggcgcccacg
     2881 tgggcggcca cctggacttc aacctcacgt cccaccacca ggtccggggc cagctgacct
     2941 accacgaact gccgggttcg gagtggggtg gcggcttcca ggtcgactac aagatcctgc
     3001 agatcggtgc cgattgggtc tacagcttcc agagccccga ccagggctgg tacaccatcg
     3061 ccggcgcctc ca
//
LOCUS       DASUDT010000276         3035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_698214, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000276 DASUDT010000000
VERSION     DASUDT010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698214"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VFV26_05665"
     CDS             complement(<1..549)
                     /locus_tag="VFV26_05665"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845687.1"
                     /translation="MSNPVNAALVCALATLVLVAGLCRWLGPRGWMDNPAGRKQHRHP
                     TPRVGGIALLLVLAGAKLAGWLTLGLSPLEWTVVGGMGLVGLLDDRFDLRARWKALAS
                     LAFALPLAGVQTWAALHLGRNITLFGLDIPDHALVIFPLMTMWYWAIPHAFNLIDGLN
                     GLSLGFSCLLLGVLSLGPEAQLG"
     gene            990..>3035
                     /gene="pnp"
                     /locus_tag="VFV26_05670"
     CDS             990..>3035
                     /gene="pnp"
                     /locus_tag="VFV26_05670"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX4845688.1"
                     /translation="MNALKFNPTTVSVDLGGTPISIETGRIAKQAHGAVVVRQGDTMV
                     LVAVCYGTPREGIDFFPLTVDYREPVLAAGKIPGGWFKREGRPTTKETLTSRLIDRPL
                     RPLFEEGYNGDTMITAQVLSYDGQHAPEVLAMVGASAALIISEIPFVNPVGGVRVGRV
                     NGQLVVNPTVEQRADSDIDLLVAGTADALVMVECGAKEVLEADMVKALAFGHEQIKTL
                     VKLQKDLQAKVGKPKVAAVKAERNEALYKEVAAAFAEKLFAALTMKVKIESYKAIDLL
                     KKEAVAQFCSDKPELKKDLVACFDELKETLFRNAILKQGVRLDGRKFDQIRPLNIEIG
                     VLPAAHGSCLFTRGETQALVTTTLGTIQNTQIIDGLEEEYKKKFYLHYNFPGYSVGEC
                     KPNRGPGRREIGHGMLAERSLFAVFPTPEENPYTVRVVSDITESNGSSSMATICGGTL
                     ALMDAGIKLKAPVAGVAMGLVSDGDKFVVLSDIAGQEDHYGDMDFKVAGTEKGITALQ
                     MDIKIGGITTEILTKALDQAKAGRLHLLEQMGQVLAAPRADFASNAPQMHSIQLPKEK
                     IRDVIGKGGATIRNIIEVSGCEVNIDDDGLCQVAGPNQEKLAKAMKMIGDLIQTAEVG
                     MTYLGKVAKVVEFGAFVTILPGLDGLLHVSEMAHHRVKDPADELSEGQEVMVKCIGID
                     "
BASE COUNT          591 a         1068 c          938 g          438 t
ORIGIN      
        1 gcccagctgg gcctcggggc ccaggctgag aacccccagc agcaggcacg agaatcccag
       61 ggaaagcccg ttgagcccat cgatgaggtt gaaggcatgg ggtatggccc agtaccacat
      121 ggtcatgagc gggaagatca ccagggcgtg gtccgggatg tccaggccga acagagtgat
      181 gttgcggccg agatgcaggg ccgcccaggt ctggaccccc gccaggggca gcgcgaaggc
      241 cagactcgcc agggccttcc accgggcccg gaggtcgaag cggtcatcca gcagcccgac
      301 caggcccatg ccacccacca cggtccactc caggggactc agccccagcg tcagccaacc
      361 cgccagcttg gccccggcca gcaccagcag cagcgcgatg ccacccactc tgggcgtggg
      421 gtggcggtgc tgtttccggc cagcgggatt gtccatccag ccgcggggcc ccaaccaccg
      481 gcagagcccc gccaccagca ccagcgtggc cagggcgcag acaagggcgg cattcacggg
      541 attcgacatg gctcaggctc ttgggagacg ggataccgtc ctcggatgga cacggctcct
      601 ggcaggttgg ttgaccagcg gatccccatt gattcggatg cttcgagggg cgtcttgaaa
      661 gctgcgaact tatacactgt gtccaccgga catggatttc aaggctcaac cccaaaaaag
      721 cccgaatcgc ctgttttcga ttgggctatt tccggcaaat ccgcccgcag gttccggcgc
      781 cacccgggcc cggccggttt ctcctgaact gctacactgg tttttgccga tcttcacctg
      841 ctccccttcg gcggcgacct ctgcaggaag cccacctccc cctcctgatc caggactcgg
      901 cggacgggtt tcatggagcg atcgcaggag accggacgcg tgagccggtc tcaggggagc
      961 ccagtgggcc cgagggccca ggagcttgca tgaacgcatt gaaattcaac cccacgaccg
     1021 tatcggtgga tctgggcggc acgcccatca gcatcgagac cggccgcatc gccaagcagg
     1081 cccacggcgc cgtcgtcgtc cgccagggcg acaccatggt gctcgtggcc gtgtgctacg
     1141 gcaccccccg cgaaggcatc gacttcttcc ccctgaccgt ggactaccgc gagcccgtgc
     1201 ttgccgcggg caagatcccc ggcggctggt tcaagcgcga aggccgcccc accaccaagg
     1261 agacgctgac ctcccgcctc atcgaccgtc ccctgcggcc cctgttcgaa gagggctaca
     1321 acggcgacac catgatcacc gcccaggtgc tcagctatga cggccagcac gcccccgagg
     1381 tgctcgccat ggtgggcgcc tccgcggccc tcatcatcag cgagatcccc ttcgtgaacc
     1441 ccgtgggcgg cgtccgcgtg ggtcgcgtca acggccagct ggtggtgaac cccaccgtcg
     1501 agcagcgtgc tgacagcgac atcgacctgc tggtggccgg caccgccgac gccctggtga
     1561 tggtggagtg cggcgccaag gaagtgctgg aagcggacat ggtgaaggcc ctcgccttcg
     1621 gccatgagca gatcaagacc ctcgtgaagc tgcagaagga tctgcaggcc aaggtgggca
     1681 agcccaaggt cgccgccgtc aaggccgagc gcaacgaggc cctctacaag gaagtggccg
     1741 ccgccttcgc cgagaagctc ttcgcggcgc tgaccatgaa ggtgaagatc gagagctaca
     1801 aggccatcga cctcctcaag aaggaagccg tcgcccagtt ctgcagtgac aagcccgaac
     1861 tcaagaagga tctggtcgcc tgcttcgacg agctgaagga gaccctcttc cgcaacgcca
     1921 tcctcaagca gggcgtgcgt ctggacggcc gcaagttcga ccagatccgc cccctgaaca
     1981 tcgagatcgg cgtcctcccc gcggcccacg gcagctgcct cttcacccgc ggcgaaaccc
     2041 aggccctggt caccaccacc ctgggcacca tccagaacac tcagatcatc gacgggctgg
     2101 aggaggagta caagaagaag ttctacctcc actacaactt ccccggctac agcgtgggcg
     2161 agtgcaagcc caaccgcggg cccggccgcc gcgagatcgg ccacggcatg ctggccgagc
     2221 gcagcctctt cgccgtgttc cccacccccg aggagaaccc ctacaccgtg cgcgtggtgt
     2281 ctgacatcac cgagagcaac ggctcgtcca gcatggccac catctgcggc ggcaccctcg
     2341 ccctcatgga tgccggcatc aagctcaagg cccccgtggc cggcgtggcc atgggcctcg
     2401 tcagcgacgg cgacaagttc gtggtgctgt ccgacatcgc cggccaggaa gaccactacg
     2461 gcgacatgga cttcaaggtc gccggcaccg agaagggcat caccgccctc cagatggaca
     2521 tcaagatcgg cggcatcacc accgagatcc tcaccaaggc cctcgaccag gccaaggccg
     2581 gccgcctgca cctgctggag cagatgggcc aggtgctcgc cgcgccccgc gccgatttcg
     2641 ccagcaacgc cccccagatg cacagcatcc agctccccaa ggagaagatc cgcgacgtca
     2701 tcggcaaggg cggcgccacc atccgcaaca tcatcgaggt gagcggctgc gaggtgaaca
     2761 tcgacgacga cggcctctgc caggtcgccg gtcccaacca ggagaagctc gccaaggcca
     2821 tgaagatgat cggcgacctc atccagaccg ccgaagtggg gatgacctac ctgggcaagg
     2881 tggccaaggt cgtcgagttc ggcgccttcg tgaccatcct ccccggcctg gacggcctcc
     2941 tgcatgtcag cgagatggcc caccaccgcg tgaaggatcc cgccgacgag ctgagcgaag
     3001 gccaggaagt catggtcaag tgcatcggca ttgac
//
LOCUS       DASUDT010000277         2699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_720463, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000277 DASUDT010000000
VERSION     DASUDT010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720463"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /gene="ribD"
                     /locus_tag="VFV26_05675"
     CDS             <1..1121
                     /gene="ribD"
                     /locus_tag="VFV26_05675"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX4845689.1"
                     /translation="AELTPDLAWALATGGPWPDPAALVGDAHFMALALQEGLKGVGLS
                     SPNPPVGCVLVKDGRVLGAGVHTRAGDPHGEIMALRDAEARDGDVRGATAYVTLEPCC
                     HQGRTPPCTLALIQAGITRVVVGVRDPNPRVDGGGLAILRAQGLEVEEGVLGEACARF
                     HAPFFKLIRTGLPWVSLKLALGSDEALGPEGRTTPITPPEVQRLGHALRRASEAIVVG
                     RHTAEVDDPQLTDRWPAPTAPHRTFHRVVMDNAGQVPAGARVWQPVAGQPALRAVTGD
                     PEPLRGVEDLRLPPGPRGCSLRHLLHELAARGVGRVLVEGGGTLVRAFLDQGLGDEFH
                     RFLGDTPAGGTPLDLLFPREWQPRAQARWPGGRWEVWR"
     gene            1184..>2699
                     /locus_tag="VFV26_05680"
     CDS             1184..>2699
                     /locus_tag="VFV26_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845690.1"
                     /translation="MRLRSWRCLTALWALLLLAACGGGGSSSSSYDARITLQAQFEKR
                     ILGTSGFGGTALRPARYCWAEVRDASSDALLASGYLGSDGTGMTTVPRGASIYVRVYA
                     QYQVPSADPGDFFMRGSVKNAPLPGTADLATFTAIPDWSVTSGTFLADQDGTLAVTAL
                     ASNRIAGAFNIADQAVTFGAAVRDMGASTTLRLPNLHTFWNTSTSPANQDRTYPALAY
                     TSGGAYLVTASQRAIFSHSVYGLGSGAANTETDEWDDGVLQETFARLLFADGSYRADG
                     SSALSLLRRDNDNVWVDRGVQSEPAAAFVAGFSDFLAAAILNDNRLLDSYVDGGGVAR
                     VAVFDLADHTYVPNIAKGEFARGSVAASLWGIWQNAAIFSGTQANLQTMWRAADPAFT
                     PNPYEFGNTPLACYPTYLTGLKRLAGVTAATSLANELYLEKVGNGTDPTSSAYLNGPA
                     LWTVSPLPINASGGFSTDGPAQGYFYDRDTASAFRFVQGSTGPRTLTLNTSGPDL"
BASE COUNT          367 a         1053 c          876 g          403 t
ORIGIN      
        1 tcgctgaact cacccccgac ctcgcctggg ccctcgccac cggcggcccc tggcccgatc
       61 ccgctgccct ggtgggggac gcccatttca tggccctggc gctgcaggag ggcctcaagg
      121 gcgtggggct gtccagcccc aatccccccg tgggctgtgt tctggtgaag gacggccggg
      181 tcctgggcgc aggcgtccac acccgggccg gagaccccca cggcgagatc atggccctgc
      241 gggatgcgga ggcccgggac ggggatgtgc ggggcgccac ggcctacgtg accctggagc
      301 cctgctgcca ccagggccgc acccccccct gcaccctggc cctcatccag gcgggcatca
      361 cccgggtggt ggtgggcgtg cgcgatccca acccccgggt ggacggcggc ggcctcgcca
      421 tcctccgggc ccaggggctg gaagtggaag aaggtgtgtt gggcgaggcc tgcgcccgct
      481 tccacgcccc cttcttcaaa ctcatccgca cgggcctgcc ctgggtgagc ctcaagctgg
      541 ccctgggctc ggacgaggcc ctggggcccg agggccggac cacgcccatc accccgccgg
      601 aagtccagcg cctgggccac gccctgcggc gggcctccga agccatcgtg gtgggccgcc
      661 acaccgccga ggtggacgat ccccagctca cggaccgctg gcccgccccc acggcccccc
      721 atcgcacctt ccaccgggtg gtcatggaca acgcgggcca ggtgcccgcc ggggcgcggg
      781 tctggcagcc cgtggcgggc cagcccgccc tccgggccgt caccggggac cccgaacccc
      841 ttcgcggggt ggaggacctc cgcctgccgc ccggcccccg gggatgcagt ttgcggcacc
      901 tgttgcacga actggccgcc cgcggggtgg gccgggtgct ggtggagggc ggcggaaccc
      961 tggtccgcgc cttcctggac cagggcctcg gcgatgaatt ccaccgcttc ctgggggaca
     1021 cccccgccgg gggaaccccg ctggacctgc tgttcccgag ggagtggcag cctcgggccc
     1081 aggcccgctg gcccggcggg cgctgggaag tctggcggta ggctggccca tacctgttcc
     1141 tggcacgacc cttgagacgg tcaggtcttc ccctggagtt cccatgcgcc ttcgatcctg
     1201 gcgatgcctc acggccctct gggccctcct cctcctggcc gcctgtgggg ggggtggctc
     1261 cagttcatcc agttatgacg cccggatcac cctccaggcc cagttcgaaa agcggatcct
     1321 cggcacctcg ggcttcggtg gcacggccct gaggccggcc cggtactgct gggccgaggt
     1381 gcgggatgcc tcctcggacg ccctcctggc ctccggctac ctgggcagcg atggcaccgg
     1441 catgaccacc gtcccccggg gcgcatccat ctacgtgcgc gtctacgccc agtaccaggt
     1501 gccctccgcc gatcccggcg acttcttcat gcggggcagc gtgaagaacg ccccccttcc
     1561 cggaaccgcg gacctcgcca ccttcacggc catcccggac tggagcgtca ccagcggcac
     1621 cttcctggcg gaccaggacg gcaccctcgc cgtcaccgcc ctggccagca accgcatcgc
     1681 cggggccttc aacatcgccg accaggccgt gaccttcggc gcggcggtgc gcgacatggg
     1741 cgcttcgacc accctgcgcc tccccaacct ccacaccttc tggaacacca gcaccagccc
     1801 cgcgaaccag gaccgcacct atcccgccct cgcctacact tccgggggcg cctacctggt
     1861 gaccgccagc cagcgcgcca ttttcagcca ctcggtctac gggctgggca gcggggccgc
     1921 caataccgaa acggacgaat gggacgatgg cgtgctccag gagaccttcg cccggctgct
     1981 cttcgccgat ggcagctaca gggccgacgg cagcagcgcc ctgtcccttc tccgccggga
     2041 caacgacaat gtctgggtgg accgcggcgt gcagagcgag cctgccgccg ccttcgtggc
     2101 cggtttttcg gatttcctcg ccgcggccat ccttaacgac aaccggctcc tcgacagcta
     2161 cgtggatggc ggcggcgtgg cccgggtggc cgtcttcgac ctcgcggacc acacctacgt
     2221 gcccaacatc gccaagggcg agttcgcccg gggttccgtg gccgcgagcc tctgggggat
     2281 ctggcagaac gccgccatct tcagtggcac ccaggcgaac ctgcagacga tgtggcgggc
     2341 agcggatccc gccttcacgc ccaaccccta tgaattcggg aacaccccgc tggcctgcta
     2401 cccgacctac ctcacgggtc tcaagcgcct ggcgggagtc acggccgcca cgtccctggc
     2461 caacgagctc tacctggaga aggtggggaa cggcacggat cccacctctt ccgcctacct
     2521 gaatggcccc gccctctgga cggtgtcccc gctgcccatc aacgcctcgg gcggtttttc
     2581 caccgatggg ccggcccagg gctatttcta cgaccgggac accgccagtg ccttccgttt
     2641 tgtgcagggc tccacgggcc cgcggaccct caccctcaac acctccggcc cggacctgt
//
LOCUS       DASUDT010000278         3305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_300693, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000278 DASUDT010000000
VERSION     DASUDT010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300693"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1366)
                     /locus_tag="VFV26_05685"
     CDS             complement(<1..1366)
                     /locus_tag="VFV26_05685"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX4845691.1"
                     /translation="MQPPIRWYRTLAWTFFIRQAAAILGLLSIILWVAYSEAERGARA
                     TANDSLTAGGYVLERAFEQQGRSMDAGLEVFAQYSGNVALVEQALESSAPTSLTDALV
                     ENLPRLSAELALVVKPDGALLACTAKGARLSFPDAGILQMALAPEDATSEGHPGPSYR
                     GFLRVDWSDRPGIYHAVARPLISPGGRPLGAMLVGVRVDDRAAVDLRRLAIAGPQRGD
                     PSAHLALLSQFRTLGATLPEAEALDRLLSREPSFLAVRAQVLDGQRSKVLPFNVGGRN
                     YLGMISPLRGVNALDLEMADVLLMPVDPLLAPFRNLQRAILAVGVAGLFIALGLSLRS
                     ARTVTAPLKALASAAQALAEGEPPETLALVPTEDEVGVLTRTFRSMVAELRVKDEWLA
                     LLETARRRTGGPEPAGMPALPGPRLGAGAEAALDEATRRLRPAGEKGGEEPLPEALQE
                     GHTFA"
     gene            1439..2113
                     /locus_tag="VFV26_05690"
     CDS             1439..2113
                     /locus_tag="VFV26_05690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845692.1"
                     /translation="MLRPLAHGLSALALTAPLLAGGLQGPVQLRERDGRPRASLKDCV
                     AILEPVDAPALAVSPSKAFSIRTVGKRFLPRVSIVTPGTEVAFPNLDHILHNVFSVTQ
                     GNRFDTGHYQPGDSPRVKVANPGLVKLYCTVHHQMNAFLWVVATPFAQTLEGRTGVQF
                     DGVPAGTYRLRLWHPEAGEKAWMVKVGTGLTQGAWALEVSLPAVEPHKNKFGRDYAPP
                     VDDRNY"
     gene            complement(2110..3168)
                     /locus_tag="VFV26_05695"
     CDS             complement(2110..3168)
                     /locus_tag="VFV26_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845693.1"
                     /translation="MPIRRWTFPLVAALAFGQEAAPFPPEAPGSWKPAWEWTLRGDQL
                     SDPGYAPASFRRAGIQLRLRWTWDFGALRLEAGTRSAMGSDGNRLNAPRWDQQPSNGT
                     QIDMVRGEVSWVGERAFGALSVGVQENGLMSSQGLWDRDLRLLGVGGTAGFRGLEGLL
                     QEAGVRVAVGRVRTPLGGEVDLAAGQAVLKLDTGPWSWTAHAGRWTLGWEPGVARLRP
                     LPGRSALERQRMVVDAGGASGTWNSAFPWSARWFQARNPETRETSEEVQVTAGSRERV
                     YWPQLSFTWQRLSSTGTLYPVNGDEWWFYRRARGPRFEASLPLPGRWIASVVYLRQRA
                     DGDEYPVTRKMLVLMKRF"
BASE COUNT          489 a         1216 c         1141 g          459 t
ORIGIN      
        1 cggcgaaggt gtgcccctcc tgcagcgctt cggggagggg ttcctccccc cccttctcac
       61 ccgcgggccg gagccgccgg gtggcctcgt ccagggcggc ttccgcgccg gctcccagcc
      121 tgggcccggg gagggccggc atccccgcag gttccggccc tccggttctc ctccgggccg
      181 tttccagcag ggccagccat tcatccttga cccgcaactc ggcgaccatg gatcggaagg
      241 tccgggtgag cacgcccact tcatcctcgg tggggacgag ggccagtgtt tccgggggct
      301 ccccttccgc cagggcctgc gcggcggagg ccagggcctt gagcggggcc gtcactgtcc
      361 gggcggagcg aaggctcagg cccagggcaa tgaagagccc cgcgaccccc acggccagga
      421 tggccctctg caggttgcgg aagggcgcca gcagcgggtc cacgggcatc agcaggacat
      481 ccgccatctc cagatccagg gcattcacgc cccgcagcgg ggagatcatc cccaggtagt
      541 tccgcccgcc cacgttgaag gggagcacct tggaccgctg gccatccaga acctgggccc
      601 ggaccgccag gaacgacggt tcccgggaca ggaggcggtc cagggcctcc gcttccggga
      661 gggtcgcccc cagcgtccgg aactggctca gaagggccag gtgggcggag gggtccccgc
      721 gctgaggccc ggcgatggcc agccgccgca ggtccacggc cgcccggtca tccacccgga
      781 cccccaccag catggccccc aggggcctgc ccccggggga gatcaggggc cgggccaccg
      841 cgtgatagat cccgggccgg tcgctccaat ccacccggag gaagccccgg taggaggggc
      901 ccggatggcc ttccgaggtg gcatcctcgg gtgccagggc catctggagg attcccgcat
      961 cgggaaagga gaggcgggcg cccttggcgg tgcaggccag gagcgcccca tccggcttca
     1021 ccacgagggc caattccgcg ctcaaccgtg ggaggttctc caccagggca tccgtgaggc
     1081 tggtcggggc gctggactcc agggcctgtt ccacgagcgc gacgttgccc gagtactggg
     1141 cgaagacctc cagccccgca tccatggagc gcccctgctg ctcgaaggcc cgctccagca
     1201 catagccacc ggccgtgagg ctgtcgttgg cggtggcccg cgcgccccgc tcggcctcgc
     1261 tgtaggccac ccagaggatg atcgagagaa gcccgaggat ggcggccgcc tgccggatga
     1321 agaaggtcca ggccagcgtg cgataccagc ggatgggcgg ctgcatcggc attccttggt
     1381 ctctccatcg gtatacttgc ctcgaatcta ctctggatat ccgggagcgt ttccaagcat
     1441 gttgcggccc cttgcacatg gcctgtccgc cctggccctg accgcgccgc tcctggcggg
     1501 cggactccag ggtccggtcc agctgcgcga acgggacggt cggccccgcg cctcgctgaa
     1561 ggattgcgtg gccatcctgg agcccgtgga cgcgccggcc ctggcggtga gcccttcgaa
     1621 ggccttctcc atccgcacgg tggggaagcg gttcctcccc cgggtgtcca tcgtcactcc
     1681 gggcaccgag gtcgccttcc ccaacctgga ccacatcctc cacaacgtgt tcagcgtgac
     1741 ccaggggaac cgcttcgata ccgggcacta ccagcctggc gactcgcccc gggtgaaggt
     1801 ggcgaacccc ggcctggtga agctctactg caccgtccat caccagatga acgcgttcct
     1861 ctgggtggtg gccaccccct tcgcgcagac cctggagggc cggacggggg tccagttcga
     1921 tggggtcccc gcgggcacct atcgactccg cctctggcat cccgaagctg gcgagaaggc
     1981 ctggatggtg aaggtgggaa cgggcctcac ccagggagcc tgggccctgg aggtctccct
     2041 gcccgcggtc gaaccccaca agaacaagtt cggccgggac tatgcgccgc cggtggatga
     2101 ccggaactac tagaaccgct tcatcaggac cagcatcttc cgtgtgaccg ggtattcatc
     2161 accgtcggcc cgctgccgga ggtacacgac cgaggcgatc caccggcccg gaaggggcag
     2221 ggaggcctcg aaccgggggc cacgggcccg gcggtagaac caccattcat cgccattcac
     2281 gggatagagg gtgcccgtgg aggaaagccg ctgccaggtg aacgacagct ggggccagta
     2341 gacccgctcg cggcttcccg ccgtgacctg cacttcctcg ctggtctccc gggtttccgg
     2401 gtttctcgcc tggaaccacc gggccgacca cgggaaggcc gagttccacg tgcccgaggc
     2461 cccgcccgcg tccaccacca tccgctgccg ctccagcgcg ctgcggccgg ggaggggcct
     2521 caggcgggcg acaccgggtt cccaccccag ggtccaccgc cccgcgtggg cggtccagga
     2581 ccagggaccc gtgtccagct tgaggaccgc ctgccccgcg gccagatcca cctcgcctcc
     2641 aaggggggtg cggacccgcc ccaccgccac ccggacgccc gcttcctgca ggaggccttc
     2701 gaggccccgg aaccccgccg tgccccccac ccccaggagg cggaggtccc ggtcccacag
     2761 gccctgcgag ctcatcaggc cgttctcctg gacgcccacg ctcagggccc cgaaggcccg
     2821 ctcccccacc cacgacacct cgccgcggac catgtcgatc tgggtcccgt tggacggctg
     2881 ctggtcccag cggggcgcgt tgagccggtt gccgtccgag cccatggccg agcgggtgcc
     2941 cgcctccagg cgcagggccc cgaagtccca ggtccagcgg agccggagct ggatgcccgc
     3001 gcggcggaag gaggccggcg cgtagccggg atccgagagc tgatcgcccc ggagcgtcca
     3061 ttcccacgcg ggcttccatg agcccggcgc ttccggcgga aagggcgcgg cctcctggcc
     3121 gaaggcgagg gcggcgacca gggggaaggt ccagcggcgg atcggcatca tcatccggag
     3181 ggtggggttc ccgtggatgg tagtccaatg ctccgggccg gcgaaggctg tctgtggcac
     3241 cggagggtcc cccattccca aaccggacct ggcggcggcg cgcccaggcc ccaccctggg
     3301 ccgtg
//
LOCUS       DASUDT010000279         4345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2046270, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000279 DASUDT010000000
VERSION     DASUDT010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4345
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2046270"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VFV26_05700"
     CDS             <1..525
                     /locus_tag="VFV26_05700"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEX4845694.1"
                     /translation="GLAGPLHGLANQEVLGWIQQTFKKVGGKVPGEEDMKKFLWDTLK
                     AGQVIPGYGHAVLRKTDPRYTAQMEFCQKHLPNDPLFKLVNMIYQVAPGVLTEHGKTK
                     NPWPNVDAQSGVIQWYYGLTDYDFYTVLFGVGRAIGVLANITWDRALGYALERPKSVT
                     TAMLEEWAAKGGAK"
     gene            complement(588..3314)
                     /locus_tag="VFV26_05705"
     CDS             complement(588..3314)
                     /locus_tag="VFV26_05705"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845695.1"
                     /translation="MRRLKTKPFPYYVGLHSLEELVTREHRVCVMNILGSESRKVTPV
                     SHEYSGGNIVAGVQYGRRGVLETKIGAIPVHRSIREVLDKGIAFDMGVVYIPPLGVCK
                     AVSELVTHNEALKRIVIVTEKVPARDSRNIRALCQEAGVDVIGANCLGMANAWDRVRI
                     GGSLGGDRPEETLVKGSIAIHSNSGNFTTTMAEYLRTAGFGISTAVSSGKDVYIHFAL
                     PEFLYAAQNDPRTKAVVIYVEPGGYYEKMALDWIKDRVFGFTKPIIACVTGRWKKNIT
                     RACGHAGALSGSGDDAESKERWFDEYFGVDVFDPKAPRVSKRGVRVSSIQYIPDAVRA
                     VYEKIDERPDFATTGDLSLKLWLGDTMMKLPPSLDLPVIQAPSPYDHQIVEVNKQVGA
                     HYLRQNMSDKSGASRMNPESQISELHGKTVLDLSRNTLEENLYFSLAKVLPEKGDIPT
                     LNLILNLFMKIDERRMELIDVGRANGCTPNAYLASQIALVGDKDLLAKSREHSAFIID
                     LIREFGLDEHTKAFPAALDEYVEKHLLRAEPSRKTDISELLLKEVKKSRKSCVALKVC
                     QHIIDLAETRGLEIRDAYEFLLATIAVCVLWNPMLEKRISRQLVEDSVTYFYLMSRIV
                     AYSVVDREHNPHWKKLVDQKLSNLNHSFTENAFKVLFGRVPGTPELVEFQALLGLTIT
                     NGPGTLSAKGAKGSVSARNDISMAFVGFLANTGRAHGGNGYEAIEFLVEQFKGVALPD
                     PGDPTHGLDLKRMANEAARTYGSYKKQALEAEDGPVRPIPCINHPIFRGNHINVDPRE
                     QFVAGAMAEKGVYNAFWEFYRLLVQELYNEGATKNVFCVNVDAVLAVITLKLVWKDLQ
                     AGRITLRQVQELAFTLFLFGRTLGVSAEIADHRDRGMDMDCRTPEKDLTYVL"
     gene            complement(3324..>4345)
                     /locus_tag="VFV26_05710"
     CDS             complement(3324..>4345)
                     /locus_tag="VFV26_05710"
                     /inference="COORDINATES: protein motif:HMM:NF027440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP citrate lyase citrate-binding
                     domain-containing protein"
                     /protein_id="HEX4845696.1"
                     /translation="NKTVTANGVTMEAFVPSDLEVYFSITSSSVHRGPVFTITPWGGV
                     DIEALPAEKKAVVEIDPFIGINAFEITNALTDTGCPEPFISALVQHLPKLWELYDGYG
                     LTTIELNPIRVMRRGNQLLPVACDVKASFDQDNPAWKRIGLPDVLFQTETTAFEADIN
                     ELRTYQGQSDVLEMNPDGSIIPFMFGGGANSAGTETLGEAAIFSSDFGGNPPYEKIYE
                     ISRITFEHWYDRASMLLLIGGKANNTDIYVTFKGVFDALRDHVAKAGWKPLYVVIGRG
                     GPNVVKGMFYAKDILDRLRFPYKIFGHDTSMILTLEYAKKVDAWWRAEGAEAYRKQVE
                     TQARA"
BASE COUNT          709 a         1406 c         1405 g          825 t
ORIGIN      
        1 ggcctggcgg gcccgctcca cggcctcgcc aaccaggagg tgctgggctg gatccagcag
       61 acgttcaaga aggtcggcgg caaggtcccc ggcgaggagg acatgaagaa gttcctctgg
      121 gacaccctca aggccggcca ggtgatcccg ggctacggcc acgcggtgct ccggaagacc
      181 gatccgcgct acacggcgca gatggagttc tgccagaagc acctgcccaa tgacccgctc
      241 ttcaagctgg tcaacatgat ctaccaggtg gcgcccggcg tgctcactga gcatggcaag
      301 accaagaacc cctggcccaa cgtcgatgcc cagagcggcg tcatccagtg gtactacggc
      361 ctgaccgatt acgacttcta caccgtgctc ttcggcgtgg gccgcgccat cggagtgctc
      421 gccaacatca cctgggaccg cgccctgggc tacgccctcg aacgccccaa gtccgtcacc
      481 acggccatgc tcgaagagtg ggccgccaag ggcggagcca agtaggttct tacttcgcag
      541 aaaaggggcg ggccgtttgg cccgcccctt ttctgcatgg aggatggtca tagcacgtac
      601 gtgaggtcct tctcgggcgt gcggcagtcc atgtccatgc cccggtcccg gtggtccgcg
      661 atctcggcgc tgacgccgag ggtccggccg aacaggaaga gcgtgaaggc cagttcctgg
      721 acctggcgca gggtgatccg cccggcctgg aggtccttcc acaccagctt gagggtgatt
      781 accgccagca ccgcatccac gttgacgcag aagacgttct tcgtggcgcc ctcgttgtag
      841 agctcctgca ccagcaggcg gtagaactcc cagaaggcgt tgtagacgcc cttctccgcc
      901 atggcgcccg ccacgaactg ctcccgggga tccacgttga tgtgattgcc gcggaagatc
      961 ggatggttga tgcaggggat gggcctgaca gggccatcct ccgcctccag agcctgcttc
     1021 ttgtacgacc cataggtcct tgccgcttcg ttcgccatcc gcttgaggtc caggccatgg
     1081 gtcggatccc cgggatcggg cagcgccacg cccttgaact gctcgacaag aaactcgatg
     1141 gcctcgtacc cattcccgcc gtgggcccgc ccggtgttcg ccaggaaccc cacgaaggcc
     1201 atggagatgt cgttccgggc gctgacgctg cccttcgccc ccttcgccga gagcgttccg
     1261 gggccgttgg tgatggtcag ccccagcagg gcctggaact cgaccagttc cggcgtacca
     1321 ggcacccggc cgaacaggac cttgaaggcg ttctccgtga agctgtggtt gaggttcgac
     1381 agcttctggt ccaccagctt cttccagtgg gggttgtgct cccggtccac caccgagtag
     1441 gccacgatgc gcgacatgag gtagaagtag gtgacggaat cctccaccag ctgccggctg
     1501 atgcgcttct ccagcatcgg attccagagc acgcacacgg cgatggtggc cagcaggaac
     1561 tcgtaggcgt cccggatctc cagtccccgc gtctccgcca ggtcgatgat gtgctggcag
     1621 accttgaggg ccacgcagga cttccgcgac ttcttcacct ccttgagaag gagctccgag
     1681 atgtccgtct tgcgggaggg ctcggcccgc agcaggtgct tctccacgta ctcgtccagg
     1741 gcggctggaa acgccttcgt atgctcgtcc agcccgaatt cacggatgag gtcgatgatg
     1801 aaggccgagt gctcccggga tttcgccagc aggtccttgt cccccaccag ggcgatctgg
     1861 gaggccaggt aggcattggg tgtgcagccg ttggcccggc ccacgtcgat gagctccatg
     1921 cgccgctcgt cgatcttcat gaacaggttc aggatgaggt tcagggtggg gatgtcaccc
     1981 ttctccggca ggaccttggc cagggagaag tagaggttct cctccagggt gttgcgggag
     2041 aggtccagga cagtcttccc gtgcagctcc gagatctgcg actcggggtt catccgggag
     2101 gcgccggact tgtcggacat gttctggcgg aggtagtgcg cccccacctg cttgttcacc
     2161 tccacgatct ggtggtcgta gggggagggc gcctggatga ccgggagatc cagggacggc
     2221 ggcagtttca tcatggtgtc gccgagccac agcttgagtg acaggtcgcc agtcgtcgcg
     2281 aaatccggtc tctcgtcgat cttctcgtag accgcccgga ccgcgtccgg aatgtactgg
     2341 atgctcgaca cgcgcacgcc gcgcttgctc accctggggg ccttcggatc gaacacgtcc
     2401 accccgaagt actcgtcgaa ccagcgctcc ttgctttctg cgtcgtcgcc gctgcccgaa
     2461 agcgccccgg cgtggccgca ggcccgcgtg atgttcttct tccagcggcc ggtgacgcag
     2521 gcgatgatcg gcttcgtgaa cccgaagacg cgatccttga tccagtccag cgccatcttc
     2581 tcgtagtagc cgccgggctc cacgtagatc accacggcct tggtgcgggg gtcgttctgc
     2641 gccgcgtaga ggaactcggg cagcgcgaaa tggatgtaga cgtcctttcc gctggatacc
     2701 gccgtgctga tgccgaagcc cgccgtgcgc aggtactccg ccatggtggt ggtgaagttg
     2761 ccggagttgg agtggatggc aatggagccc ttcaccagcg tctcttccgg gcggtccccg
     2821 ccgaggctgc cgccgatgcg cacgcggtcc caggcattgg ccatgcccag gcagttggcg
     2881 ccgatgacgt ccacccccgc ctcctggcag agcgcccgga tgttgcgcga gtcccgcgcc
     2941 ggcaccttct ccgtgacgat cacgatgcgc ttgagggcct cgttgtgcgt caccagctcg
     3001 gacaccgcct tgcatacgcc gaggggcgga atgtagacca cgcccatgtc gaaggcgatc
     3061 cccttgtcca ggacctcgcg gatgctgcgg tggacgggga tggcaccgat cttcgtttcg
     3121 agcacgcccc gccgcccgta ctggacgccg gccacgatgt tcccgccgct gtactcgtgg
     3181 gagacgggcg tcaccttccg gctttcactg ccgaggatgt tcatcacgca gacacggtgt
     3241 tcccgggtca ccagctcttc cagggagtgc aggcccacgt agtagggaaa gggcttcgtc
     3301 ttcagccgcc gcatggatgc ctcctaggcc ctggcctgcg tttcaacctg tttccgatag
     3361 gcctcggccc cttcggcgcg ccaccacgcg tcgaccttct tcgcgtattc cagcgtgagg
     3421 atcatcgagg tgtcgtggcc gaagatcttg taggggaagc ggagccggtc gaggatgtcc
     3481 ttggcgtaga acatgccctt cacgacattg ggcccgcccc gcccgatcac cacgtacagg
     3541 ggcttccagc cggccttggc cacgtggtcc cgcagggcgt cgaagacccc cttgaaggtc
     3601 acgtagatgt ccgtgttgtt ggccttgccg ccgatgagca ggagcatgct cgcccggtcg
     3661 taccagtgct cgaaggtgat gcggctgatc tcgtagatct tctcgtaggg gggattccct
     3721 ccgaaatccg acgagaagat ggcggcctcg cccagcgttt cggtccccgc gctgttggcg
     3781 ccgccgccga acatgaaggg gatgatgctg ccatccgggt tcatctccag cacatcgctc
     3841 tggccctggt aggtcctcag ctcgttgatg tccgcctcga aggccgtggt ctcggtctgg
     3901 aagaggacgt ccggaaggcc gattcgcttc caggccgggt tgtcctggtc gaagctcgcc
     3961 ttcacgtcgc aggccacggg caggagctgg ttgcccctgc gcatgacccg gatggggttc
     4021 agctcgatgg tggtgaggcc gtagccgtcg tagagctccc acagcttcgg caggtgctgg
     4081 accagggccg aaatgaaggg ctcgggacag ccggtgtccg tcagggcgtt ggtgatctcg
     4141 aaggcgttga tcccgatgaa gggatcgatc tccaccaccg ccttcttctc ggcgggcagg
     4201 gcctcgatgt ccacgccgcc ccagggcgtg atggtgaaga ccgggccccg gtggacgctg
     4261 gaactggtga tgctgaagta gacctccaga tcggagggga cgaaggcctc catggtcacg
     4321 ccgttggccg tcaccgtctt gttcc
//
LOCUS       DASUDT010000280         5397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_13880, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000280 DASUDT010000000
VERSION     DASUDT010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13880"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            409..504
                     /gene="ffs"
                     /locus_tag="VFV26_05715"
     ncRNA           409..504
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VFV26_05715"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(644..1516)
                     /locus_tag="VFV26_05720"
     CDS             complement(644..1516)
                     /locus_tag="VFV26_05720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HEX4845697.1"
                     /translation="MRTVSPPLKARLDGLCARYDTAGALLKDPLSVPLAYASPLDREV
                     AAFVAAHLAYGRVDPMIRAVRSALAPLGSAPAAWLRAQGEAEVRRALSAALAGWVWRF
                     HTAEDLVAWILAWRRLDGESGTGLEPHLAPESGEDPDAALSRLVQRLRIELPATYGSR
                     FSLPDPLEGAACKRWRMFLRWMARTGWPDLGLWSHYPVDQLVIPLDTHVARVSRFIGL
                     SRRATPDGKMAREITNSLRRLDPADPLRYDFALSHLGILGDCPGVRKRSTCAACPLYS
                     VCRAGSEPAARIPS"
     gene            1657..2061
                     /locus_tag="VFV26_05725"
     CDS             1657..2061
                     /locus_tag="VFV26_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845698.1"
                     /translation="MMNLRGLGNLAKILEEAAKPDSVLREDREKPKPKVLKKGEKAGN
                     MRVMDPKRKVWYEKRLKEITAKAVAPEGPASGPVSAPLMPAAPALAKSVASKVGGSLL
                     QTLAAAKDAKPKAEGQKQRSEAWRRKPGESIF"
     gene            complement(2136..2648)
                     /locus_tag="VFV26_05730"
     CDS             complement(2136..2648)
                     /locus_tag="VFV26_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845699.1"
                     /translation="MPQSAPLSPFAGLPDDARLWLVAFDGPVDAQLLAPEMEALLGRW
                     RHKGVQYHGAWTLLEDRILAVAEPTLAVQPSGCAIDGMLRGVRQAAERLGLGLQDVEA
                     VHTRLPDGLRAFPRTELEARLADGTLGADTPVLDLALLTVGDLRSGRFQRPLSATWIG
                     RKFLRTAPLA"
     gene            2760..3707
                     /gene="hemH"
                     /locus_tag="VFV26_05735"
     CDS             2760..3707
                     /gene="hemH"
                     /locus_tag="VFV26_05735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX4845700.1"
                     /translation="MRDTAILLLNLGGPVNLDQVEPFLAALFGDRDLIRLPGPAWLQG
                     PFSRLIAKLRAPGAKGRYAEIGGGSPLLRESAFQASALRSALRAAGRTEPVKLCFRYA
                     APRAGGLLKALKRQGITRLVPVTFYPHDCRATTGSSLRELAVEAARAGMELLPGVDHY
                     ATDPDYLDSLERPLRAALAELPGATVIFSAHSLPVRQIEAGDPYEKEIHATRDALMAR
                     IGAIPGGYRLAYQSRTGPVRWLEPPLKSVLESMGGQDVIVVPMSFVSEHIETLHELDI
                     EYRHVADQAGIRTYRRVAAPGTDPAYIRCLTRRVLEILP"
     gene            3704..4963
                     /gene="hemG"
                     /locus_tag="VFV26_05740"
     CDS             3704..4963
                     /gene="hemG"
                     /locus_tag="VFV26_05740"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HEX4845701.1"
                     /translation="MSTLILGGGVTGLAAAWHLQQRGEAVEVWEAGAAVGGWMKTLPW
                     EGGHFETGPQGVLWQKGTAVDRLFSAIDLPFKSPGTGARWVGKGGRLIPVPASPVGLM
                     TSPLMPLGAKLRMMLEPFQPVRPAEPEEGLSAFITRRLGKGVATELLPSMIAGVLAAP
                     AETLSVDAIPKLRQWEATGSLVNGIRKGGVSHMVVPVGGMGQLPLRLASKLPAVRTGL
                     RAERMEALPGGRWRVSGGGEAREIDRVVLALPAFEAAALLGPVAAQSAQALAAIPYTS
                     VDLWHSRHAPLPALKDSFGFLIHPPEGKGYLGSLVPSWMDPQSAPEGVMQLRSFIGGA
                     FGKPADLDAWEGIFARLRHWIPALGEPSAMRHERAERAIPRPELGHRARVTAAVEGLP
                     AGVDWLSNARFGPGVRDILEGLETWTG"
     gene            5042..>5397
                     /locus_tag="VFV26_05745"
     CDS             5042..>5397
                     /locus_tag="VFV26_05745"
                     /inference="COORDINATES: protein motif:HMM:NF022591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2914 domain-containing protein"
                     /protein_id="HEX4845702.1"
                     /translation="MRQMFFIPLFACAALIAQAPAPKASAEVKVGTGVEKMEIQGESA
                     AFKVAAGTRIYAWTKVTGAAESTVTVVFSMGERSSKMELKVPRSPYRTNAYRTFRAGD
                     AGSWTVKVMSADGAELG"
BASE COUNT          850 a         1806 c         1946 g          795 t
ORIGIN      
        1 ccttggcctc gaaaacgaca gtgccatcga gcttggagat ccggctcgtc cgggggacga
       61 agcggaaacc gtccaggggg tcgtgacctg ccttggtgaa gtggcgggcg atcttcatgg
      121 gtgggatcct gggcgggggg gggtggtgaa ggatgtcgga acaggcgggg cagaatccgc
      181 aaggcgcacg aacctgaccc cagggaatgg gggattcggt gggatacctc taggggttgt
      241 gccgggagaa aaggatggcc ccaacatgta ggggtgtcaa ggggccctca ccggattttt
      301 ccaccgatta aaaaagtcca tcccattcct ggatttgagc cctggtgccc ttcggcggag
      361 ggtcctttcc ctggcgcgaa accccctgtg gaggctaccc tgatgccaag ccgggcccca
      421 tgcatcgggg tgcgacgaac cgggtcagat cggaagaagc agccctaagt cgttcccccg
      481 agtgccgtgg caagcccggc ccctttttgg ggcaggcttg ccatcgcgca ggcagtgcct
      541 gcgtgaatcg gcactggccc acttaggttg cgcacgtggc caagcccggc cctcggttcc
      601 aacgaaggtt cgtaaggagg cctgggagcc tcctcctttt tttctagctc ggaatccgcg
      661 cagcgggttc cgagcctgcg cggcacacgg aatacaacgg acacgccgca caggtgctgc
      721 gtttccggac acccgggcag tcccccagaa tgccgaggtg gctgagggcg aagtcgtagc
      781 gcaggggatc ggcggggtcc aaccggcgca gggaattcgt gatttcgcgg gccatcttcc
      841 catcgggcgt ggcccggcgg ctgaggccga tgaagcggga tacccgggcg acatgggtgt
      901 ccagggggat caccagctgg tccaccgggt agtgggacca gaggcccagg tccggccagc
      961 cggtgcgggc catccagcgc aggaacatgc gccagcgctt gcaggcggcc ccttccaggg
     1021 gatcgggcag ggagaagcgg gatccgtagg tggcgggcag ctcgatccgc aggcgctgca
     1081 ccagccgcga aagggcggcg tcgggatcct ccccggattc cggtgcgagg tggggctcca
     1141 ggccggtgcc gctctcgccg tccaggcgcc gccaggccag gatccaggcc acgaggtctt
     1201 ccgcggtgtg aaagcgccag acccagccgg ccagggcagc gctcagggcc cgccggacct
     1261 cggcttcgcc ctgcgcccgc agccaggcgg cgggcgcaga tcccaggggg gccagggcac
     1321 tccgcaccgc ccggatcatg gggtccaccc ggccataggc gaggtgggcg gccacgaagg
     1381 cggccacctc ccggtccagg ggggaggcat aggccagggg tacggacagg ggatccttca
     1441 gcagggcccc ggcggtgtcg tagcgggcgc aaagtccgtc gaggcgggct ttaagagggg
     1501 gggagacggt ccgcatgggt tcagtgtccc aggatgcccg atgggcggtg gccgcaaaaa
     1561 aagcgatctc gtgccttaaa tcactatgta agcaaaggcg ttgccggtag tctgatggac
     1621 ggtggcctgt ggccccttga ggagtaccga ccgcacatga tgaacctgcg tggccttgga
     1681 aacctggcga agatcctgga agaagctgca aaacctgatt ccgtgttgcg tgaagaccgc
     1741 gagaagccca agcccaaggt tctcaagaag ggggaaaagg ccggcaacat gcgggtcatg
     1801 gatcccaagc ggaaggtctg gtacgagaag cgtctgaagg agatcaccgc caaggcggtc
     1861 gctccggaag gcccggcgtc cggtcccgtg agcgcccccc tgatgcctgc agccccggcc
     1921 ctggccaaga gcgtggcctc gaaggtcggc ggttccctgc tgcagaccct ggctgccgcc
     1981 aaggatgcca agcccaaggc cgaaggccag aagcagcgtt ccgaagcctg gcgccgcaag
     2041 ccgggcgagt cgatcttcta gcttcatccc actcatgcga aaacgaggcg gccttgccgc
     2101 ctcgttttcg tactgcgggg cgaagccccg cggcttcagg ccaggggtgc ggtccggagg
     2161 aatttccgcc cgatccaggt ggctgagagg gggcgctgga agcggccgct ccggaggtcg
     2221 cccacggtga gaagggccag atccagcacc ggcgtgtccg cgcccagggt gccgtccgcg
     2281 aggcgtgcct ccagctccgt ccgggggaag gcgcgcaggc cgtcgggcag gcgcgtgtgg
     2341 accgcctcga catcctggag gcccaggccc agcctttcag cggcctggcg cacgccgcgc
     2401 agcatgccgt cgatggcgca gccggagggt tggaccgcca gggtgggctc ggcgacggcc
     2461 aggatgcggt cctccagaag ggtccaggca ccgtggtact ggacgccctt gtggcgccac
     2521 cggccgagca gggcctccat ctcgggcgcc aggagctggg cgtccacggg gccatcgaag
     2581 gccacgagcc agagacgggc gtcatcgggc aggccggcaa agggggatag gggcgcggac
     2641 tggggcatgg cgaactccgg tgtcaggaca gtctatggga tgccgggcga tccttctcca
     2701 tgtcttgtcc atgcttccgt gacgaaagtt ccggcaagtc tcgcgtaagg tggaaggcga
     2761 tgcgagatac cgcgattctg ctcctgaacc tcggcggtcc ggtgaacctg gatcaggtcg
     2821 aacctttcct ggcggccctg ttcggcgacc gggacctcat ccggctgccg gggcccgcct
     2881 ggctccaggg gcctttctcg cgcctcatcg cgaagctgcg ggcccccggt gccaagggcc
     2941 gctacgccga gatcggcggc ggctcgccgc tgctgcggga aagcgccttc caggcctcgg
     3001 cgctgcgctc ggccctgcgg gctgcgggcc gcacggagcc cgtgaagctc tgcttccgct
     3061 atgctgcgcc ccgggccgga gggctgctca aggcgctgaa gcgccagggc atcacccggc
     3121 tggtgcccgt gaccttctat ccccacgact gccgggccac cacgggatcc agcctgcggg
     3181 agctggcggt ggaggccgcc agggccggca tggaactgct gccgggcgtg gaccactacg
     3241 ccacggaccc ggactacctg gattcgctgg aacggcccct gcgcgccgcc ctggcggagc
     3301 ttccgggcgc cacggtgatc ttcagcgccc acagcctgcc ggtgcgccag atcgaagcgg
     3361 gggatcccta cgaaaaggag atccacgcca cgcgggatgc cctcatggcc cgcatcggcg
     3421 ccatccccgg cgggtaccgg ctggcctacc agagccgcac gggccccgtg cgctggctgg
     3481 agccgcccct gaagtcggtg ctggaatcca tgggcggcca ggatgtgatc gtcgtgccca
     3541 tgagcttcgt cagcgagcac atcgagaccc tgcacgagct ggacatcgag taccgccacg
     3601 tggccgacca ggcgggcatc cgcacctacc gccgcgtggc cgccccgggc accgatcccg
     3661 cctacatccg ctgcctcacc cggcgcgtcc tggagatcct cccatgagca ccctgatcct
     3721 tggcgggggc gtgaccggcc tggccgccgc ctggcacctc cagcagcgcg gcgaagccgt
     3781 ggaagtgtgg gaggccggag ccgccgtggg cggctggatg aagaccctgc cctgggaggg
     3841 cggccatttc gagaccgggc cccagggcgt gctctggcag aagggcaccg ccgtggaccg
     3901 gctcttcagc gccatcgacc tgcccttcaa gtcgcccggc accggcgccc gctgggtggg
     3961 gaagggcggg cggctcatcc ccgtgcccgc ctcgcccgtg ggcctcatga cctcgcccct
     4021 gatgcccctg ggcgccaagc tccgcatgat gctggaaccc ttccagccgg tgcgcccggc
     4081 ggaaccggag gagggcctgt ccgccttcat cacccggcgc ctgggcaagg gcgtggccac
     4141 ggagctgctg ccctccatga tcgcgggcgt cctcgccgcg ccggcggaga ccctctctgt
     4201 ggacgccatc cccaagctgc gccagtggga ggccacgggc agtctggtga acggcatccg
     4261 caagggcggc gtgagccaca tggtggtgcc ggtcggcggc atgggccagc tgcccctccg
     4321 cctggcttcg aagctgcccg cggtgcggac cgggctgcgc gccgagcgca tggaggccct
     4381 tccgggcggc cgctggcgcg tgagcggcgg cggcgaggcg cgcgagatcg accgtgtggt
     4441 gctcgcgctt ccggccttcg aggcggcggc cctgctgggg cctgtggcgg cccagagcgc
     4501 ccaggcgctg gcggcgatcc cctacacctc cgtggatctc tggcacagcc gccatgcgcc
     4561 cctgccggcc ctgaaggaca gcttcggctt cctcatccac ccgccggaag ggaagggcta
     4621 cctgggctcc ctggtgccct cctggatgga tccccagagc gcgccggagg gtgtcatgca
     4681 gcttcgcagc ttcatcggag gcgccttcgg caagcccgcg gacctggatg cctgggaggg
     4741 gatctttgcc cgcctgaggc actggatccc cgccctcggg gagccgtcgg ccatgcgcca
     4801 cgagcgcgcc gagcgcgcca tcccgcgccc ggagctgggc caccgcgccc gcgtgacggc
     4861 cgccgtggag gggctgcccg ccggggtgga ctggctgagc aacgcccgct tcgggcccgg
     4921 cgtgcgcgac atcctggagg ggctggagac ctggaccgga tagggctgga cgggcggatg
     4981 aaccaggtga catctgccca catcgggcgc agaatggggc acctttcctc aaggagttcc
     5041 catgcgccag atgtttttca tcccgctctt cgcctgcgcg gccctgattg cccaggcccc
     5101 cgctcccaag gcttcggctg aagtcaaggt gggcacgggc gtcgaaaaaa tggaaatcca
     5161 gggcgaatcc gccgccttca aagtcgcggc cggcaccagg atctatgcct ggaccaaggt
     5221 gactggcgcc gccgaaagca ccgtcacggt ggtgttcagc atgggcgagc gttcctcgaa
     5281 gatggagctg aaggtgcccc gctctcccta tcgcaccaac gcctaccgca ccttccgggc
     5341 gggcgatgcc ggaagctgga ccgtgaaggt catgtcggcg gacggcgccg aactggg
//
LOCUS       DASUDT010000281         5075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1538012, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000281 DASUDT010000000
VERSION     DASUDT010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5075
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538012"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2124
                     /gene="purL"
                     /locus_tag="VFV26_05750"
     CDS             <1..2124
                     /gene="purL"
                     /locus_tag="VFV26_05750"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF002290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEX4845703.1"
                     /translation="HLKNLPTEGPRVIQGPGENAGVVDIGDGWAVAFKMESHNHPSFI
                     EPYQGAATGVGGILRDVFTMGARPLANLNSLRFGELDAPRMKGLVKGVAAGISGYGNC
                     MGIPMLGGDAAFDASYNGNILVNAFTLGVLRSDKIFKGFASGVGNKVMYIGSKTGRDG
                     IHGASMASAEFGEGSEEKRPTVQVGDPFTEKLLLEACLEIFQTDWVIGIQDMGAAGLT
                     SSSFEMASRAGTGLEIRLDQVPQREEGMTPFELMLSESQERMLLVARPGCEEKIIHVL
                     HKWGLDACVVGEVTDSGRFIGSWHGQPVINLPIQPLVDAAPKYDRPRQRPGYLDAVNA
                     APLPADLKPTEVERTLRQLVQQPTVASKRWIFEQYDGTVRSNTLLGMGRGDAGIIRVK
                     DEQGQDTGKAVAMSSDCNSRFCYLDPFWGAAHAVAEACRNLACVGAEPIGLTDCLNYG
                     NPEKPENMWTFEQGCLGIRQACLALDVPIVSGNVSLYNDTEGQSIFPTPMIAAVGLVE
                     DCAGQVATDAPDATALSKIGNRICGSAFRAAHDGIFLLGETRDELGGSEYLKLRTGKV
                     QGACPELRLDEELRLQACVREGIRLGLIRSAHDTSEGGLLVTALESAFGGEMGCQLML
                     TRGALRLDSLLFGETAGRIVVSVSAEGEGSLATLCAAHRVPCAKIGATGGSRITLAVD
                     GQPLLDVDAAELKQLHGEALEQALG"
     gene            2172..2657
                     /locus_tag="VFV26_05755"
     CDS             2172..2657
                     /locus_tag="VFV26_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845704.1"
                     /translation="MRLPILLFLASSLVLSGAPPKVRPERPSAAGREAARLEVQAKQA
                     KVMADKRKAAAARAEVEAKAAQAKAKEAETRAAELQIRASEARAKAAEAEAKSASEKA
                     SEARLKAREAQQRVASLKGAKAKPAKSAKPAAKPEEAPAAKAEPKTEPAPKPEPEAVP
                     K"
     gene            complement(2672..2860)
                     /locus_tag="VFV26_05760"
     CDS             complement(2672..2860)
                     /locus_tag="VFV26_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845705.1"
                     /translation="MDLYLDARETELLTGLLERRLEDLRREINHTDRAAFKAALKADE
                     ALLGSLLARVKAPAEMGI"
     gene            complement(2943..3098)
                     /locus_tag="VFV26_05765"
     CDS             complement(2943..3098)
                     /locus_tag="VFV26_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845706.1"
                     /translation="MFKGSGDLDFLLAGGVFDRLQLEDLLRHLRAQEAAVRNRPHPYE
                     MALYFEA"
     gene            complement(3303..3488)
                     /locus_tag="VFV26_05770"
     CDS             complement(3303..3488)
                     /locus_tag="VFV26_05770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845707.1"
                     /translation="MAAFLLWLILLVVCWPLALLALILYPLIWLILLPFRLLGFAVEG
                     VFGIVRGLFLLPGRILK"
     gene            3630..>5075
                     /locus_tag="VFV26_05775"
     CDS             3630..>5075
                     /locus_tag="VFV26_05775"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX4845708.1"
                     /translation="MTLDRRAFLGAGLATGAAALMGGEMKGPHTPVELALEEATVDGL
                     RAGLAAGHWTSADLVRRYQARIKALDQAGPKLNSVIELNPDALALAKALDAERKAGKV
                     RGPLHGIPVLIKDNIDTADRMKTTAGSLALAEAPAPKEDAFVVARLREAGAVILGKTN
                     LSEWANFRSTRSTSGWSGRGGQTRNPFALDRNPSGSSSGSAAAVSASLCAVAVGTETD
                     GSIVSPAGSCGVVGLKPTVGLVGRSGIIPIAHSQDTAGPMTRTVRDAAILLSALAGED
                     PRDPATRGARGQDYASLLDPDGLRGARIGVARAFFGRHPGVDRVMAKALETLKAAGAV
                     LVDPVDLPTAAAYRDAEFEVLLCEFKADLNAYLAARGGEVKDLAGLIAWNDAHADREM
                     PHFGQELLIQAQAKGPLTDEAYLKALEKGQRLSREGLDRVLDTHRLDAIVAPTRGPAG
                     LTDWIHGGDPGSGGCSAPPAVSGYPHLTVPAG"
BASE COUNT          858 a         1758 c         1771 g          688 t
ORIGIN      
        1 cacctgaaga acctgcccac ggaaggcccc cgcgtcatcc agggtcctgg cgagaacgcg
       61 ggcgtggtgg acatcggcga cggctgggcc gtggccttca agatggagag ccacaaccac
      121 ccgagtttca tcgagccgta ccagggcgcg gccacgggcg tgggcggcat cctgcgtgat
      181 gtcttcacca tgggggcccg gcccctggcc aacctgaaca gcctgcgctt cggggaactc
      241 gacgcgccgc gcatgaaggg gctcgtcaag ggcgtggccg cgggcatctc cggctacggc
      301 aactgcatgg gcatccccat gctgggtggc gacgcggcct tcgatgccag ctacaacggc
      361 aacatcctcg tgaatgcctt caccctgggc gtgctgcgca gcgacaagat cttcaagggc
      421 ttcgcctccg gcgtgggcaa caaggtgatg tacatcgggt cgaagaccgg ccgcgacggc
      481 atccacggcg ccagcatggc ctcggcggag ttcggcgaag gcagcgagga gaagcgcccc
      541 acggtgcagg tgggcgatcc cttcacggag aagctgttgc tcgaagcctg cctggagatc
      601 ttccagaccg actgggtcat cggcatccag gacatggggg ccgcgggcct cacctccagc
      661 agcttcgaga tggccagccg cgccggcacg ggcctggaga tccgcctgga ccaggtgccc
      721 cagcgcgagg agggcatgac gcccttcgag ctgatgttga gcgagagcca ggagcgcatg
      781 ctgctggtgg cccgccccgg ctgcgaagag aagatcattc acgtgctgca caagtggggt
      841 ctcgacgcct gcgtagtggg cgaagtcacc gacagcggcc gcttcatcgg cagctggcac
      901 ggccagcccg tcatcaacct gcccatccag ccgctcgtcg atgccgcgcc gaagtacgac
      961 cggccccgcc agcgcccggg ctacctggat gcggtcaacg ccgcgccgct gcctgcggac
     1021 ctgaaaccca ccgaggtgga gcgcaccctg cgccagctcg tccagcagcc cacggtggcc
     1081 agcaagcggt ggatcttcga gcagtacgac ggcaccgtgc gcagcaacac cctgctgggc
     1141 atgggccgtg gcgatgcggg catcatccgc gtgaaggacg agcagggcca ggacacaggc
     1201 aaggccgtgg ccatgtccag cgactgcaac agccgcttct gctacctcga tcccttctgg
     1261 ggcgcggccc acgccgtggc cgaggcctgc cgcaacctgg cctgcgtggg ggccgagccc
     1321 atcggcctca cggactgcct caactacggc aatcccgaga agcccgagaa catgtggacc
     1381 ttcgagcagg gctgcctggg catccgccag gcctgcctgg ccctcgacgt gcccatcgtc
     1441 agcggcaacg tgagcctcta caacgacacc gaaggccaga gcatcttccc cacgcccatg
     1501 atcgcggccg tgggcctggt ggaggactgc gcgggccagg tggccaccga cgcgccggat
     1561 gccaccgcgc tctccaagat cggcaaccgc atctgcggat ccgccttccg cgccgcccac
     1621 gacggcatct tcctgctggg cgagacgcgg gacgagctgg gcggcagcga gtacctgaag
     1681 ctgcgcaccg gcaaggttca gggtgcctgc ccggagctgc gcctggacga ggagctgcgg
     1741 ctccaggcct gcgtgcgcga gggcatccgc ctgggcctca tccgcagcgc ccacgacacc
     1801 agcgagggtg gtctgctcgt caccgccctg gaaagcgcct tcggcgggga gatgggctgc
     1861 cagctgatgc tgaccagggg cgcgctgcgc ctggacagcc tgctgttcgg ggaaaccgcc
     1921 ggccgcatcg tggtgtccgt cagtgccgag ggcgaaggca gcctcgccac cctctgcgcc
     1981 gcccaccgcg tgccctgcgc caagatcggc gccacgggcg gatcccgcat caccctggcg
     2041 gtggacggcc agcccctcct ggatgtggac gcggcagagc tgaagcagct gcacggggag
     2101 gctctggagc aggccctggg ttgacaggcg ggatttgccc gggaaccctg aggatcttcc
     2161 ccgagggtcc catgcgcctg ccgatcctgc tgttcctggc ttcctctctc gtcctgtccg
     2221 gtgccccgcc gaaggtccgt ccggagcggc cctcggctgc ggggcgcgag gccgcccgcc
     2281 tggaagtcca ggccaagcag gccaaggtca tggccgataa gcgaaaggcc gccgccgccc
     2341 gggcggaagt ggaggcgaag gccgcccagg ccaaggccaa ggaggccgag acccgcgcgg
     2401 cggagcttca gatccgcgct tcggaggccc gggccaaggc tgcggaggcg gaggcgaaaa
     2461 gcgcttccga aaaggccagc gaggcccgcc tgaaagcccg ggaggctcag cagcgggtgg
     2521 ccagcctgaa gggggccaag gcaaagcccg ccaaatccgc caagccggcc gccaagcctg
     2581 aggaggcccc cgcggccaag gccgaaccca agacggaacc tgcacccaaa cctgagccgg
     2641 aagccgtgcc caagtagggg ggccgccgcg tctagatccc catctccgcc ggggccttca
     2701 ccctggccag caggctgccc aggagggcct cgtcagcctt gagggcggcc ttgaaggcgg
     2761 cgcggtccgt gtggttgatc tcccggcgga gatcctcgag gcggcgctca agcaggccgg
     2821 tcagcagctc cgtttccctg gcgtcgaggt agagatccat ggcggcctcc ccggacgggg
     2881 gccgcgctgg cagcccccgt ccggggaaat atcggacctc cagcggtctt ccgccaggat
     2941 cttcaggctt cgaagtagag cgccatctcg tagggatggg gccggttccg cacggcggcc
     3001 tcctgggccc gcaggtgccg cagcaggtcc tccagctgga ggcggtcgaa gacgccgccg
     3061 gccagcagga agtccaggtc gccagaaccc ttgaacacgg gacctccacg ggacccggtc
     3121 attcttgatc tatagatcgg caaaggttgt gatcgggctc aagtccctag ctcaccgagg
     3181 gttaaaagga gctgacagga ttaacaggat tttgaaggat taacaggatt caagatgtaa
     3241 agcgcctggt tctaatcctg ttaatcaatc ttttaatctt gtaaatcctg tcctggtttt
     3301 tctcatttga gaatccgccc cggcagcagg aacaggcccc gcacgattcc gaagacgccc
     3361 tccacggcga aacccagcag ccggaagggc aggaggatga gccagatcag cgggtagagg
     3421 atcagcgcca ggagggccag gggccagcag accaccagca ggatgagcca gagcaggaac
     3481 gcggccatgg gagcctccgg aacacaggat cggaccgcct ggagccgggc gggatccccc
     3541 atcggcgaac ggcctccggg ggccggcggg cggggggtat gatcgcttca tctccaagag
     3601 gaaagtccat gccgcatgac gatgctttct tgaccctcga ccgccgcgcc ttcctgggcg
     3661 cggggttggc gacgggcgcc gcggcgctga tgggaggcga gatgaagggc ccgcacacac
     3721 ccgtggaact ggcgctggag gaagccacgg tggatggcct ccgggcgggc ctggccgcgg
     3781 gccactggac ctcggcggac ctcgtccgcc gctaccaggc ccgcatcaag gctctggatc
     3841 aggccgggcc gaagctgaat tcggtcatcg agctgaaccc cgatgccctc gccctggcga
     3901 aggcgctcga cgccgagcgg aaggccggga aggtgcgcgg gccgctgcac ggcatccccg
     3961 tgctcatcaa ggacaacatc gacaccgcgg accgcatgaa gaccacggcg ggctccctgg
     4021 ccctggcgga ggccccggcg ccgaaggagg atgccttcgt ggtggcgcgg ctccgcgagg
     4081 cgggagcggt gatcctgggc aagaccaacc tcagcgagtg ggccaatttc cggtcgaccc
     4141 gcagcaccag cggctggagc ggccgcgggg ggcagacccg caaccccttc gccctggacc
     4201 gcaatccctc cggttccagc tccggcagcg ccgcggccgt gtccgccagc ctctgcgccg
     4261 tggccgtggg cacggaaacc gacggatcca tcgtgagccc cgccggctcc tgcggcgtgg
     4321 tgggactcaa gcccacggtg ggcctggtgg gccgcagcgg catcatcccc atcgcccaca
     4381 gccaggacac cgccggaccc atgacgcgca ccgtgcggga cgcggcgatc ctcctttccg
     4441 ccctggcggg cgaggatccc cgggacccgg ccacccgggg ggcccggggg caggactacg
     4501 ccagccttct ggatccggac gggctgcgcg gcgcgcgcat cggcgtggcc cgcgccttct
     4561 tcggccgcca tcccggcgtg gaccgcgtga tggccaaggc cctggagacc ctgaaggccg
     4621 ccggggccgt gctggtggat cccgtggacc tgcccacggc cgccgcctac cgtgacgcgg
     4681 agttcgaggt gctgctctgc gagttcaagg cggacctgaa cgcctacctg gcggcccggg
     4741 gcggggaggt gaaggatctg gcggggctca tcgcctggaa cgacgcccac gcggaccggg
     4801 agatgcccca cttcgggcag gagctgctga tccaggccca ggccaagggc cccctcacgg
     4861 acgaggccta cctgaaggcc ctcgaaaaag ggcagcgcct gtcccgcgaa ggcctcgacc
     4921 gcgtgctgga cacgcaccgc ctcgatgcga tcgtggcgcc cacgcgaggc cccgcgggcc
     4981 tcaccgattg gatccacggc ggcgatcctg gatccggcgg gtgctcggca cccccggccg
     5041 tgtcgggtta cccgcacctc acggtgccgg ctggc
//
LOCUS       DASUDT010000282         3858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_14013, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000282 DASUDT010000000
VERSION     DASUDT010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14013"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VFV26_05780"
     CDS             complement(<1..444)
                     /locus_tag="VFV26_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845709.1"
                     /translation="MSAPRPEDQPTHHTLRAPLETWLNQQNQALLEEVIATWQDAMGR
                     FRPDAALLEQLCQAAAPASNAAPEGLPPAFAAALDLVEGATSQGDLLKRLLDGLAPMV
                     ERSALFILKQGLVSLYAHRGFEANAPLKPGAVVPPADLEAVIQGLG"
     gene            561..920
                     /locus_tag="VFV26_05785"
     CDS             561..920
                     /locus_tag="VFV26_05785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX4845710.1"
                     /translation="MADLSIAVRQAGDVAVLMPAGFINAHTVREFEEALEGLVQDGRY
                     TILLNCKDLSYISSAGLGAIMGLIETVREHQGDILLSNLQANVFAIFDTLGFTQLYRV
                     FGDEDQALAAVAPERKG"
     gene            923..1360
                     /locus_tag="VFV26_05790"
     CDS             923..1360
                     /locus_tag="VFV26_05790"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845711.1"
                     /translation="MAAIVDPAQFRLVIPSQTRYLNLVTGLAKRASLVAGFDDAAAAK
                     VSIAVDEAVTNVILHAYHGEGEHSVELELRFTSEALEIHILHSGQGFRSDQVVLPDPK
                     EYIKHPRKGGLGLLLMSRFMDEVQFKADEASGRNECCLIKKLD"
     gene            1379..2947
                     /locus_tag="VFV26_05795"
     CDS             1379..2947
                     /locus_tag="VFV26_05795"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEX4845712.1"
                     /translation="MPTNPFDRLRQLALKIPEGAQELLPLIDFLETFPDQGTEEDLVH
                     LVGVTAMGIAKASQGGLWDGGKWLFLRGSAPAFPTHPGAGWEVRPWAYGGEVYGHLVL
                     RAEGLPGAVPLLLSISAPLLAWRRAEAVRSTQNQALALQLSRLNTVFDLTRNLGQVET
                     RQDLVRLMANTLMGEFRIMRLLVVDAQGGVLHAKGLGPLPEALEGEALHDLVLAKGLV
                     HAIELQDQNHSHGFAYAADPAVGKLSEDDEVFLRTLLNLTSSQLSSLEFREARIQAER
                     MEKDLDLARDIQRSLLPKTLPEPSGWQCAAANLPYQAVGGDLYDLWMARDPELGDRLH
                     LAVGDISGKGLPASMMMTQLSAYLRAMGDARVEDWGRMAERLNCRMNDVRDGNRYTTL
                     FAASLNPQTGDLRFVNGGHNPPLLVRSSGEVVRLAPTGPMVGLLPGVAFAEGRAAMAP
                     GDVLVIFTDGLVEAENAAGEELGDGRLADVILRRPGAGADELFEALLVEAFQHLEEGK
                     FRDDVTLVVVKRMG"
     gene            2993..3832
                     /gene="htpX"
                     /locus_tag="VFV26_05800"
     CDS             2993..3832
                     /gene="htpX"
                     /locus_tag="VFV26_05800"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEX4845713.1"
                     /translation="MNQAKTLLIIVAMTGVLVWIGGYIGGESGMVMALAIGLVMNGVS
                     YFFSDKIVLASYGARVVGPAEAPELHAIVANLAQRAGLPLPRVAIIPEDTPNAFATGR
                     NPEHAVVAVTEGIMRILSRPELEAVLAHELGHVKNRDILIGSLAAVLAQAIMFLSRMA
                     MWFSPRDEEGRSNPLAGIAIMILGPVAALLLQMAVSRSREYLADDYSARLTGRPDMLA
                     SALERLHAYNQQLPMHAAEPATAHMMIVNPLSGGGLMSLFSTHPPMAVRVERLRRMPI
                     EAR"
BASE COUNT          597 a         1305 c         1337 g          619 t
ORIGIN      
        1 gcccaggccc tggatcacgg cctccagatc cgctggcggc accacggcgc cgggcttgag
       61 gggggcattc gcctcgaagc cgcggtgggc gtacagcgag accagtccct gtttgaggat
      121 gaagagggcg ctgcgttcca ccattggcgc cagcccgtcc aggaggcgct tgaggagatc
      181 gccctgggag gtggcgcctt cgaccagatc gagggctgcg gcgaaagccg gggggaggcc
      241 ttccggcgca gcattcgatg ccggtgccgc ggcctggcac agctgctcca gcagcgccgc
      301 atcggggcgg aagcggccca tggcgtcctg ccaggtggcg atgacctctt cgagcagggc
      361 ctggttctgc tgattcagcc aggtctccag cggcgcgcgg agggtgtggt gggtgggctg
      421 atcctcgggg cggggggcgc tcatcggtgg gctcggtcga aggttccgtg ccagggtatc
      481 ccacttcggc ccggattccc gctcactggc aattggacgg gggaaccgat aggatggccg
      541 aggttccttg gagatggcgg atggcggatc tttccattgc ggtgaggcag gccggtgatg
      601 tggcggtgct tatgcccgcc gggttcatca atgcccatac cgtgcgcgaa ttcgaggagg
      661 ccctggaggg gctggtccag gacgggcgct ataccatcct tctcaactgt aaggatctca
      721 gctatataag ctcggccggc ctgggcgcca tcatgggcct catcgagacg gtccgcgagc
      781 atcaggggga catcctcctg tccaacctcc aggcgaatgt ctttgcgatc ttcgacaccc
      841 tgggcttcac ccagctctac cgggtcttcg gcgacgagga ccaggcgctg gcggcggtgg
      901 cgccggaacg gaagggttga gcgtggcggc gatcgtggac cccgcccagt tccggctcgt
      961 gattccgagc cagacccgct atctgaatct cgtgacgggc ctggccaagc gggcctccct
     1021 ggtggccggg ttcgatgatg ccgccgcggc caaggtgagc atcgccgtgg acgaggccgt
     1081 gaccaacgtg atcctccacg cctaccacgg cgagggcgaa cacagcgtcg agctggaact
     1141 gcgcttcacc agcgaggccc tggagatcca catcctccat tcgggccagg gcttccgcag
     1201 cgaccaggtg gtgctgccgg atcccaagga gtacatcaag cacccccgca agggcggcct
     1261 tggcctgctg ctcatgagcc gcttcatgga cgaggtgcag ttcaaggcgg acgaggcctc
     1321 gggccggaac gagtgctgcc tgatcaagaa gctcgactga agttccaggc cccgccccat
     1381 gccgacgaac cccttcgacc gccttcgcca gctggcgctg aagatccccg aaggggccca
     1441 ggagctcctg cccctcatcg acttcctgga gacctttccg gaccagggca ccgaggagga
     1501 tctcgtccac ctggtgggcg tgaccgccat gggcatcgcc aaggcgagcc aggggggcct
     1561 gtgggacggc ggcaagtggc tgttcctccg gggttcagcc ccggcctttc ccacccatcc
     1621 cggggcgggc tgggaagtca ggccctgggc ctatgggggc gaggtttacg gacatctggt
     1681 gctgcgggcg gagggccttc cgggtgcggt gcccctgctc ctttccatca gcgcccccct
     1741 gctggcctgg cggcgggccg aggccgtgcg cagcacccag aaccaggcgc tggccctgca
     1801 gctctcccgg ctcaatacgg tcttcgacct cacccgcaac ctgggccagg tggagacccg
     1861 gcaggatctg gtgcggctca tggcgaacac gctcatgggg gaattccgga tcatgcgcct
     1921 cctggtggtg gatgcccagg gcggggtgct ccacgccaag gggctcgggc ccctgccgga
     1981 ggccctggaa ggagaggccc tgcacgacct ggtgctggcc aagggactgg tgcacgccat
     2041 cgagctgcag gatcagaacc acagccacgg cttcgcctat gcggcggatc cggccgtggg
     2101 gaagctgtcc gaggatgacg aggtgttcct ccgcaccctg ctgaacctca cctcctccca
     2161 gctgtcgagc ctggagttcc gggaagcccg catccaggct gaacgcatgg agaaggacct
     2221 ggatctggcc cgggacatcc agcggagcct gctccccaag acccttccgg aacccagcgg
     2281 ctggcagtgc gctgcggcga acctgcccta ccaggccgtg ggcggtgacc tctacgatct
     2341 ctggatggcc cgcgacccgg agctgggcga ccggctccac ctcgcggtgg gcgacatctc
     2401 cggcaaaggg ctgcccgcct ccatgatgat gacccagctc tcggcctacc tcagggccat
     2461 gggggatgcc cgggtggagg actggggccg catggcggag cgcctgaact gccgcatgaa
     2521 cgatgtgcgg gacggcaacc gctacaccac cctgttcgcc gccagcctca acccccagac
     2581 cggcgacctc cgcttcgtga acggcggcca caacccgccc ctgctggtgc gatccagtgg
     2641 cgaggtcgtg cggctcgccc ccacgggccc catggtgggg ctgctgccgg gcgtggcctt
     2701 cgccgagggc cgggctgcca tggccccggg ggatgtgctg gtgatcttca cggatggcct
     2761 cgtggaggcg gagaacgcgg ccggggagga actcggcgat ggccggctgg cggatgtcat
     2821 cctgcgccgc cccggcgccg gggcggacga gttgttcgaa gcgctcctgg tggaggcctt
     2881 ccagcacctg gaagagggca agttccggga cgacgtgacc ctggtggtcg tcaagcggat
     2941 gggctgaaca ccccttgatc gcctccgtat cctggaatct ggaggcaact tcatgaacca
     3001 ggcgaaaacc cttctcatca tcgtggccat gacgggcgtg ctggtgtgga tcggcggcta
     3061 catcggcggc gagtcgggca tggtcatggc cctcgccatc ggcctcgtga tgaacggggt
     3121 cagctacttc ttctcggaca agatcgtgct ggccagctac ggggcccggg tggtgggccc
     3181 ggccgaggcc ccggagcttc atgccatcgt ggccaacctg gcccagcggg cggggctgcc
     3241 cttgccccgg gtcgccatca tccccgagga cacgcccaac gccttcgcca cgggccggaa
     3301 ccccgagcac gcggtggtgg cggtcaccga aggcatcatg cgcatcctca gccgtcccga
     3361 gctggaggcg gtcctggccc acgaactggg gcacgtgaag aaccgggaca tcctcatcgg
     3421 cagcctggcg gcggtgctgg cccaggccat catgttcctc tcccgcatgg ccatgtggtt
     3481 cagcccccgg gacgaggagg ggcgctccaa ccccctggcg ggcatcgcca tcatgatcct
     3541 ggggcccgtg gcggccctcc tgctccagat ggccgtgagc cgctcccgcg agtacctggc
     3601 ggacgactac agcgcccgcc tcacgggccg cccggacatg ctggcctcgg ccctggagcg
     3661 cctgcatgcc tacaaccagc agctgcccat gcacgccgcg gaacccgcca cggcccacat
     3721 gatgatcgtg aatcccctga gcggcggcgg cctcatgagt cttttctcca cccatccccc
     3781 catggcggtc cgggtggaac gcctgcggcg catgcccatc gaggcccggt agcccgaact
     3841 gaatcccccg ggggcacc
//
LOCUS       DASUDT010000283         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1626431, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000283 DASUDT010000000
VERSION     DASUDT010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626431"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /locus_tag="VFV26_05805"
     CDS             <1..929
                     /locus_tag="VFV26_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX4845714.1"
                     /translation="NAVATVISTGVLSARNAILMAGVLNFGGALVGTHVATTIAKGIA
                     DSQHVVPAVIAAALMAAITWDLLTWWFGIPSSTSHTLLGGLAGAVVAHAGFGALHTRK
                     LQEIGVFIILSPAMGFIVGMLLILVILWVVRRRSSHKVNVVFRKAQLVSAAAMSFTHG
                     QNDAQKAMGIICLALIAYNFHLPLDAKAKVIVPLWVKIGSATFMALGTASGGWKIIKT
                     MGSRIVKLRPIHGFAAETAAAAVLFTTAHFGIPVSTTHSITGAIMGVGTSMNASAVRW
                     GVAGNIVVAWVLTIPISALLAAGFLKLVTPFF"
     gene            1071..>2670
                     /locus_tag="VFV26_05810"
     CDS             1071..>2670
                     /locus_tag="VFV26_05810"
                     /inference="COORDINATES: protein motif:HMM:NF021639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845715.1"
                     /translation="MALPDPRLDDLLSSGTPRLEPLLRWLLDASPEDSVDGEARRTAR
                     LRRLLDALEERGLTGPLAEAWNHTSAIRLLAETGLPDRTTLMGEGFLRLVDRIIPRLD
                     PESDLYALLDRLNLDEADAAWIEGLPPDLRSAWGRLLAPPQEIWAHAARLLAYRAAAV
                     GLSRDLLALDPEGSDADSPFFHLTRTVHEAGDHPREAGTLLAWKACRAACSATLAQAQ
                     DRLEARGVSSDLVFRLELLEAQLTRIGQLLDFAGDRGDGTAFAIELVRGSAAQHGLLS
                     LLRTTVKRLARKVVEHTGETGEHYIARNRREWWAMGGSAAGGGLLTAGTALLKSALSA
                     LPLAPLLSGLALAGNYALSFCAMQLLGFSLASKQPAMTAAALARALEADEDQAREIEL
                     VAAITRTQVIATLGNVLATMPVAIGIVLAWVRLTGHGPLGQESALHGLHGSHPFHGWT
                     LVFAALTGVLLWLSSLAAGWTANWSAYRCLPEALVQNHRLRSWFGAGGAVALGRFVHR
                     HLAGFAGYTVLGGLLVFVPMAFAFA"
BASE COUNT          350 a         1049 c          860 g          411 t
ORIGIN      
        1 ccaacgcagt agccacggtc atctccacgg gcgtgctctc ggcgcgcaac gccatcctca
       61 tggcgggcgt cctgaatttc ggcggcgccc tcgtgggcac ccacgtggcc accaccatcg
      121 ccaagggcat cgccgacagc cagcatgtgg tgccggccgt gatcgccgcg gccctcatgg
      181 ccgccatcac ctgggatctc ctcacctggt ggttcggcat cccctccagc accagccaca
      241 ccctgctcgg gggcctggcc ggggccgtgg tcgcccacgc gggtttcgga gccctccaca
      301 ccaggaaact ccaggagatc ggcgtcttca tcatcctctc ccccgccatg ggcttcatcg
      361 tcggcatgct gctcatcctg gtcatcctgt gggtggtgcg ccgccgctcc agccacaagg
      421 tcaacgtggt gttccgcaag gcccagctgg tcagcgcggc ggccatgtcc ttcacccacg
      481 gccagaacga cgcccagaag gccatgggca tcatctgtct cgccctcatc gcctacaact
      541 tccacctgcc cctggacgcc aaggccaagg tgatcgtccc cctctgggtg aagatcggca
      601 gcgccacctt catggccctg ggcaccgcct ccggcggctg gaagatcatc aagaccatgg
      661 gctcgaggat cgtgaagctg cggcccatcc acggcttcgc cgccgagacc gccgccgccg
      721 cggtgctctt caccaccgcc cacttcggca ttcccgtgag caccacccac agcatcacgg
      781 gcgcgatcat gggcgtcggc acctccatga acgccagcgc cgtgcgctgg ggcgtggcgg
      841 gcaacatcgt cgtggcctgg gtgctcacca tccccatcag cgccctgctg gccgcgggct
      901 tcctcaagct cgtgacaccc ttcttctgat cccaggcacc cggggcctcc cgcggtggat
      961 ccacagacat cagaactgtt actcaaccgg actaggcggc cctcatccca tcggtggggg
     1021 tcgttttttt aggaatgtgc caccctggag gctccacctc cggagtcccg atggccctgc
     1081 ccgaccccag gctggatgac ctgctgagca gcggcacgcc gcggctcgaa cccctgctcc
     1141 gctggctgct ggatgcctcg cccgaggatt ccgtggacgg cgaggcccgg cgcacggccc
     1201 gcctgcggcg gctcctggac gccctggagg agcgggggct caccgggccg ctggcggagg
     1261 cctggaacca cacgtccgcc atccggctgc tggcggaaac gggcctgccg gaccgcacca
     1321 ccctcatggg cgaaggcttc ctgcgccttg tcgaccgcat cattccgcgc ctggaccccg
     1381 aaagcgacct ctacgccctg ctggaccgcc tgaacctgga cgaggcggac gccgcctgga
     1441 tcgagggcct gccgccggac ctgcggagcg cctgggggag gctgctggcg ccgccccagg
     1501 agatctgggc ccatgccgcc cgcctgctgg cctaccgcgc cgcggccgtg ggcctttccc
     1561 gcgacctgct ggccctggat cccgaaggca gcgatgcgga ttcgcccttc ttccacctca
     1621 cgcggaccgt ccacgaggcc ggggaccacc cccgggaggc cggcaccctc ctcgcctgga
     1681 aggcctgccg ggccgcctgc tcggccaccc tggcccaggc ccaggaccgg ctggaggccc
     1741 ggggcgtctc ctcggatctg gtcttccgcc tcgagctgct ggaggcccag ctcacccgca
     1801 tcggccagct gctggacttc gccggggacc ggggcgacgg gaccgccttc gccatcgagc
     1861 tggtgcgggg cagcgcggcc cagcacgggc tgctgtccct gctccgcacc acggtcaagc
     1921 gcctggcccg caaggtggtg gagcacacgg gcgagaccgg cgagcactac atcgcgcgga
     1981 accgccggga atggtgggcc atgggcggct ccgcggccgg tggcggcctg ctgacggcgg
     2041 gcacggccct gctcaagtcc gccctgtcgg ccctgcccct ggcccccctg ctgtcgggcc
     2101 tcgccctggc cggcaactac gccctgagct tctgcgccat gcagctgctg ggcttcagcc
     2161 tggcctccaa gcagcccgcc atgaccgccg cggccctggc ccgggccctg gaggcggacg
     2221 aggaccaggc ccgggagatc gagctggtgg cggccatcac ccgcacccag gtcatcgcca
     2281 ccctgggcaa cgtgctggcc accatgcccg tggccatcgg catcgtcctc gcctgggtcc
     2341 gcctcaccgg gcacgggccc ctggggcagg aatccgctct ccacggcctg cacggcagcc
     2401 atcccttcca cggctggacg ctggtcttcg ccgcgctgac cggcgtcctg ctctggctct
     2461 ccagcctcgc cgcgggctgg accgccaact ggagcgccta ccgctgcctg cccgaggccc
     2521 tggtccagaa ccaccggctg cggtcctggt tcggagcggg cggcgccgtg gccctgggcc
     2581 gcttcgtcca ccgccacctg gcgggcttcg cgggctacac cgtcctgggc ggcctgctgg
     2641 tcttcgtgcc catggccttc gccttcgccg
//
LOCUS       DASUDT010000284         7948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_80167, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000284 DASUDT010000000
VERSION     DASUDT010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7948
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80167"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /gene="thrS"
                     /locus_tag="VFV26_05815"
     CDS             <1..1212
                     /gene="thrS"
                     /locus_tag="VFV26_05815"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEX4845716.1"
                     /translation="RLEEAKARDHRKLGKELGLYSFHPEAPASPFFHPKGTQVYNELV
                     TYMRELYFKYGYSEVITPQVLDVALWKTSGHYENYAENMYFTTAEEREYALKPMNCPG
                     HCLMFGSQKHSYRDLPIRYADFGRLHRYERSGVTHGLTRVRTFCQDDAHIYCTPDQIK
                     TEMAAFLALLKEVYDTFGFEGMRVALSTRPEKRLGSDEIWDAAESALGEALDEAGMPY
                     ILNPGEGAFYGPKIEFQILDALKRPWQLGTLQVDYMLPERFDLNYTKADGSEGRPIML
                     HRAILGSLERFMGILVEHTAGAFPAWLAPVQVAILPITDRANAFSTEAAARAKALGLR
                     VELDSRNESLKAKIREAQLAKVPYMLVIGDREAEAGTVSVRHRHRGDLGVQPLEAFLE
                     SLAAEVRERQR"
     gene            1308..1871
                     /gene="infC"
                     /locus_tag="VFV26_05820"
     CDS             1308..1871
                     /gene="infC"
                     /locus_tag="VFV26_05820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX4845717.1"
                     /translation="MNDGIRAQEVRVISEDGEQLGLMPPHQAIRIAEERGLDLVEVAG
                     NANPPVCRIMDYGKYKFMEAKREHAARAKQKNIVVKEVKFRPKTDDHDFDFKVKHILR
                     FLEEEDKVKVVVMFRGREVVHRDIGYRIIEEVIQRVGDKAIVEKGAGIDGRDMHAILA
                     PRIIEVPKAPKKPKAAAPETPATEAQI"
     gene            1882..2085
                     /gene="rpmI"
                     /locus_tag="VFV26_05825"
     CDS             1882..2085
                     /gene="rpmI"
                     /locus_tag="VFV26_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEX4845718.1"
                     /translation="MAGYKIKTHKGAQKRFKKTAGGKFKRGCSHQRHILTKKSAKRKR
                     QLDMGGMVAKADQKAVAMMLPYA"
     gene            2283..2630
                     /gene="rplT"
                     /locus_tag="VFV26_05830"
     CDS             2283..2630
                     /gene="rplT"
                     /locus_tag="VFV26_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEX4845719.1"
                     /translation="MTRVKRGFKRAQRRKRMMKFAKGFYGAKSRLYRSAKEAVEKALG
                     YAYRDRKVKKRDFRRLWVVRISAACTQNGTSYSKFMGGLKKASVDLDRKILADLAVRN
                     PEAFTKLVAVAKG"
     gene            2700..3770
                     /locus_tag="VFV26_05835"
     CDS             2700..3770
                     /locus_tag="VFV26_05835"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX4845720.1"
                     /translation="MDHLLPPEITEAGRAFPQALAACGDLDALLRLKGTYVGREGSHA
                     ARLMDLLKTAPKEQKRDLGAAINGLKQQWEEGLKLRQAELEAAKRSLNALADRWDPSL
                     PPPVPARGALHPLNRLMDRLVEVFRPLGFHVEEGPEVETEAHNFDGLNIPEDHPAKAS
                     SDTFYLAAHPELLLRTHTSPVQVRTLLRVAPDLARRGGIRFLAPGRVYRKDEIDPTHS
                     PMFHQVEGMLVGRGIGMQHLKGTLEYALRALFGPDTEIRLRPSYFPFVEPGCEVDVSC
                     PLCGAQGCRVCKGSGWVEILGAGLIHPNVLKYAGIDPNQWSGWAFGMGVERMAMMLSQ
                     TPDLRLFFENDQRFLKAMGGLD"
     gene            3770..5692
                     /locus_tag="VFV26_05840"
     CDS             3770..5692
                     /locus_tag="VFV26_05840"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF015448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX4845721.1"
                     /translation="MWIDRKALAAEIPAAAALDTRQLCELLASVGFPVDGVAPREGGD
                     VLDVDITANRGDAMSHRGMAREVAAKLQQPLTSLAPPAPAEGAPKIEVRLESSACPLY
                     ATALLSLSAGATPPEAQAFLRALEATPKGLPAVDASNELLHRYGHPTHAFDADRIRGA
                     VAVRWAQAGETLVTLDGVTRTLAVQDLVIADESGPIALAGVMGGDGTKVTEATRRVLL
                     ESAWFDPRPVKATARRHSLHTDASHRFGRGADPAMATVARDLLVDRLKAWAGATLEGA
                     WTAGALPPAGPPVVLDAALLTRVAGETMPLPEAAEILRRLGCGVDERPGTLAVQPPTW
                     RHDLAIPEDLAEEVLRLRGYEHIPSVLPPLEGPPVPLAAGYLQRQALARRLAHLGFHQ
                     TVTYGFISPEADAAFAAPGNAAEGRTLANPLGQEYSVMRGTLLASLRATAEQNLRQGA
                     REVRLFEVAPTHVSGPKGPVERFTLGLAWGGTLGGLDYLSPARPVQEADLAGIARDLG
                     LARLPEVRPLGEGLFGFEVPVADLPQAGVRIIPAFRPFSRFPAVERDLSLLVDLGQSY
                     EALATAMRAALPAEALQDLRCVDVFRHKSLPPGRQAWLMRLRFQADRTLVGAEVDGWM
                     AAALAAAEALGAQLRA"
     gene            5714..5950
                     /gene="zapB"
                     /locus_tag="VFV26_05845"
     CDS             5714..5950
                     /gene="zapB"
                     /locus_tag="VFV26_05845"
                     /inference="COORDINATES: protein motif:HMM:NF017786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HEX4845722.1"
                     /translation="MDLLKQLEAKMQALVQQRNQLKEELDALKAAGSADSQELQTLRT
                     RLEDALAEKVTLEKDREAVKEQVAAILRALEALG"
     gene            5947..6306
                     /locus_tag="VFV26_05850"
     CDS             5947..6306
                     /locus_tag="VFV26_05850"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX4845723.1"
                     /translation="MKSQPPLPGVRAATVSVLGQELQVQTDRPETLAAAVRILEDTFR
                     DMDSQCQVRWGGVPKGLDTPSWYLLGALNLAHRVARLEQEANQHTQNLEQTLSKLLND
                     VPDEPSAPVPFLAEDGD"
     gene            6533..>7948
                     /gene="rny"
                     /locus_tag="VFV26_05855"
     CDS             6533..>7948
                     /gene="rny"
                     /locus_tag="VFV26_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEX4845724.1"
                     /translation="MNLISWIFLILFFAAAGVGLLMALRAQKATVEASQAQARAEADV
                     KAQREKMLEEAKREAQRLRERGEQEAEALRKESELKVKEQALQARQEAEKLLAERQAN
                     LEKQEQRLLSKETGLQSKEEGLDKKLQQVEQKTKDVEALTEKRKAELEKLEAQQAEAR
                     QLVEAQAKRLEEVAGLTREDAKKELTSQLEYAAKMDAAKLVRRIDEEAQEEAAKKARW
                     TIGAAIQRVASDVVTEQAVSSVQLPSDDLKGRIIGREGRNIRALEKATGCDLIVDDTP
                     ESIVVSSFDPIRREVARQAILKLLADGRIHPARIEEVVEKVKVDMDQHLKEIGEAACI
                     ELGFPDVHPKLHKLVGRLNYRTSYGQNVLEHTKEVARIAEYMAGEMGADARLCRRAGL
                     FHDIGKAIDREVEGTHIEIGMQLMQRYGEKEEVIHAMSCHHGDFEPRTVEAMLITAAD
                     ALSAARPGARREMLETYVKRLE"
BASE COUNT         1406 a         2730 c         2665 g         1147 t
ORIGIN      
        1 cgcctggagg aggccaaggc ccgcgaccac cgcaagctgg gcaaggaact gggcctctac
       61 tccttccatc cggaggcgcc ggcctcgccc ttcttccacc ccaagggcac ccaggtctac
      121 aacgagctgg tgacctacat gcgcgagctg tacttcaagt acggctacag cgaagtcatc
      181 accccccagg tgctggacgt ggccctctgg aagaccagcg gccactacga gaactacgcc
      241 gagaacatgt acttcaccac cgccgaggag cgggagtacg cgctgaagcc catgaactgc
      301 ccgggccact gcctcatgtt cggcagtcag aagcacagct accgcgacct gcccatccgc
      361 tacgcggatt tcgggcggct gcaccgctac gagcgcagtg gcgtcaccca tgggctgacc
      421 cgcgtccgca ccttctgcca ggacgacgcc cacatctact gcacgcctga tcagatcaag
      481 accgagatgg ccgcgttcct ggcgctgctg aaggaggtct acgacacctt cggcttcgag
      541 ggcatgcgcg tggccctgtc gacccgcccc gagaaacgcc tcggctccga cgagatctgg
      601 gacgcggccg aaagcgccct gggtgaggcc ctggacgaag ccggcatgcc ctacatcctg
      661 aatcccgggg aaggcgcctt ctacggcccc aagatcgaat tccagatcct ggatgccctg
      721 aagcggccct ggcagctggg caccctccag gtggactaca tgctgccgga gcgcttcgac
      781 ctgaactaca ccaaggccga tggcagcgag gggcggccca tcatgctgca ccgcgccatc
      841 ctgggcagcc tggagcgttt catgggcatc ctggtggagc acaccgccgg ggccttcccg
      901 gcctggctgg cgccggtcca ggtggccatc ctgccgatca ccgaccgggc caatgcgttc
      961 tccacggaag ccgcggcgcg ggcgaaggcc ctcggcctgc gggtggagct ggattcccgc
     1021 aacgagagcc tcaaggcgaa gatccgcgag gcccagctgg cgaaggtgcc ctacatgctg
     1081 gtgatcgggg accgggaagc cgaggcgggc acggtgtccg tgcggcaccg gcaccggggc
     1141 gacctggggg tgcagcccct ggaggccttc ctggagagcc tcgcggccga ggtgcgggaa
     1201 cgccagcgct gagcctgttt tccttgcttg gcgggaatcc gttcaagtgg tagacttttt
     1261 gtccttgtgc aactagggga ggaaccattc gtccgaacga gacccgcatc aacgacggca
     1321 tccgggccca agaggtccgc gtcatctcag aagatggcga acagctcggc ttgatgcctc
     1381 cccaccaggc catccggatc gcggaagagc gcggtctcga tctggtggaa gtggccggga
     1441 acgccaatcc gcctgtctgc cgaatcatgg actacggcaa gtacaagttc atggaagcca
     1501 agcgggagca cgcggcccgg gccaagcaga agaacatcgt cgtcaaggaa gtgaagttcc
     1561 gccccaagac cgacgatcac gacttcgact tcaaggtgaa gcacatcctg cggttcctgg
     1621 aagaagaaga caaggtcaag gtggtggtca tgttccgtgg acgcgaagtg gtccatcgcg
     1681 acatcggcta ccggatcatt gaagaagtca tccagcgggt cggtgacaag gccatcgtcg
     1741 aaaagggcgc cggcattgat ggccgcgaca tgcatgccat cctcgccccc cggatcatcg
     1801 aagtgcccaa ggcccccaag aagcccaaag ccgcagcacc cgaaacccca gcaaccgaag
     1861 ctcaaatcta gcgaggaacc catggccggt tacaagatca agacccacaa aggcgcccag
     1921 aagcggttca agaagaccgc cggcggcaag ttcaagcgcg gctgctcgca ccagcgccac
     1981 atcctgacca agaagtcggc caagcggaag cgccagctgg acatgggcgg aatggtggcc
     2041 aaggccgatc agaaggccgt ggccatgatg ttgccctacg cctgattttc tccgggggtt
     2101 ccacgctccg cttcgctgcg cgaacacccc cggacccccg cgctctgcgc aggccaagcc
     2161 tgcttagagc ttgttctcca gtgcccgaga tcttaggatc aaaggttcaa cccggtggct
     2221 gaggccaccc ccgatgaggc cttcaaacgc tcttccgagc tgcctcgagg aaaggaaaag
     2281 acatgactcg cgtcaaacgc ggttttaaac gggcccagcg ccgcaagcgc atgatgaagt
     2341 tcgccaaggg cttctacggc gccaagtccc ggctgtaccg ctctgccaag gaagccgtcg
     2401 aaaaggccct cggctacgcc taccgcgatc gcaaggtcaa gaagcgcgac ttccgccgcc
     2461 tctgggtggt gcgcatcagc gccgcctgca cgcagaacgg caccagctac tccaagttca
     2521 tgggcggcct gaagaaggct tccgtggatc tggaccgcaa gatcctcgcg gatctggccg
     2581 tgcgcaatcc cgaagcgttt accaagctcg tggccgtggc caagggctga tcgcgaagca
     2641 acccatcgca gatacccgaa aggccgcgcg agcggccttt ctttgtgttg aggctcccca
     2701 tggatcatct gctgccgccg gagatcaccg aggcggggcg cgcctttccg caggccctgg
     2761 ccgcctgcgg cgatctggac gccctgctgc gcctgaaggg gacctacgtg ggccgcgagg
     2821 gcagccacgc cgcgcggctc atggacctgc tcaagaccgc gcccaaggag cagaagcgcg
     2881 atctgggcgc cgccatcaac ggcctgaagc agcagtggga ggagggcctg aagctccgcc
     2941 aggcggagct tgaagcggcg aagaggagcc tgaacgcgct ggccgaccgc tgggatccct
     3001 cgctgccccc acccgtgccg gcccggggcg cgttgcatcc cctgaaccgc ctcatggacc
     3061 gcctggtgga ggtcttccgg cccctgggtt tccacgtgga agaggggccc gaggtcgaaa
     3121 ccgaggccca caacttcgat ggcctgaaca tccccgagga ccatccagcc aaggcctcgt
     3181 cggacacctt ctacctggcc gcccatccgg agctgctgct gcgcacgcac accagccccg
     3241 tgcaggtgcg aacgctcctg cgcgtggcgc cggacctggc caggcgcggc ggcatccgct
     3301 ttctggcccc gggccgcgtg taccgcaagg atgagatcga tcccacccac agccccatgt
     3361 tccaccaggt ggagggcatg ctcgtgggtc gcggcatcgg catgcagcac ctcaagggca
     3421 ccctggaata cgcgctgcgg gcgctcttcg gacccgacac ggagatccgc ctgcggccct
     3481 cgtacttccc cttcgtggag cccggctgcg aggtggacgt gagctgcccc ctctgcggcg
     3541 cccagggctg ccgcgtgtgc aaggggtcgg gctgggtgga gatcctcggc gcgggcctca
     3601 tccatcccaa cgtgctgaag tacgctggca ttgatcccaa ccagtggtcg ggctgggcct
     3661 tcggcatggg cgtggagcgc atggccatga tgctgagcca gacaccggat ctgcgcctgt
     3721 tcttcgagaa cgaccagcgc ttcctcaagg ccatgggagg gctcgactga tgtggatcga
     3781 ccgcaaggcc ctcgccgccg aaatccccgc cgccgccgcc ctggataccc gccagctctg
     3841 cgagctgctg gcctccgtgg gcttccccgt ggatggcgtc gccccgcgag aaggcggcga
     3901 cgttttggat gtggacatca ccgccaaccg gggagatgcc atgtcgcacc gcggcatggc
     3961 ccgcgaggtg gccgcgaagc tgcagcagcc cctgacgtcc ttggcgccgc ccgctccggc
     4021 tgaaggcgcg cccaagatcg aggtgcgcct ggagagttcg gcatgccccc tctacgccac
     4081 ggccctgctg agcctgagcg cgggtgccac cccaccggag gcccaggcct tcctgcgggc
     4141 cctggaggcc acgcccaagg gcctgcccgc ggtggacgcc tccaacgagc tgctgcatcg
     4201 ctacggccac cccacccacg ccttcgacgc cgaccgcatc cggggcgccg tggccgtgcg
     4261 ctgggcgcag gccggggaaa cgctggtgac gctggatggc gtgacccgca cgctggcggt
     4321 gcaggatctg gtcatcgccg atgaatccgg gcccatcgcc ctggccggcg tcatgggcgg
     4381 cgacggcacc aaggtgacgg aagccacgcg ccgcgtgctg ctggagagcg cctggttcga
     4441 tcccaggccc gtgaaggcca cggcccgccg gcacagcctg cacaccgacg cctcccaccg
     4501 cttcggccgc ggcgccgatc ccgccatggc caccgtggcc cgggacctcc tggtggaccg
     4561 cctgaaggcc tgggcgggcg ccacgctgga aggcgcctgg actgcggggg ccctgccccc
     4621 ggccgggccc ccggtggtcc ttgatgccgc cctgctcacg cgcgtggcgg gtgaaaccat
     4681 gcccctgccc gaagcggcgg agatcctgcg ccgcctcggg tgcggggtgg acgagcggcc
     4741 gggcaccctg gccgtccagc cgcccacctg gcggcacgac ctggccattc ccgaggatct
     4801 ggcggaggag gtcctccgcc tgcgcggcta cgagcacatc ccctcggtgc tccctcccct
     4861 ggaaggcccg cccgtgcccc tcgccgcggg gtacctccag cggcaggccc tggcccggcg
     4921 cctggcccac ctgggcttcc atcagaccgt gacctacggc ttcatcagcc ccgaggccga
     4981 tgccgccttc gcggccccgg ggaatgccgc cgaggggcgg accctggcca accccctggg
     5041 gcaggagtac tcggtcatgc ggggaaccct gctggcgagc ctgcgggcca ccgccgagca
     5101 gaacctccgc cagggcgccc gggaggtccg tctcttcgaa gtggcgccga cccacgtcag
     5161 tggccccaag gggccggtgg agcgcttcac cctgggcctg gcctggggcg gcaccctggg
     5221 tggtctggac tacctgagcc cggcccgccc ggtgcaggag gccgatctgg cgggcatcgc
     5281 ccgggacctg ggcctggcgc ggctgccgga ggtgcgtccg ctgggggagg gtctcttcgg
     5341 gttcgaagtg cccgtggccg acctgcctca ggctggggtg cgcatcatcc ccgccttccg
     5401 ccccttcagc cgcttcccgg cggtggagcg ggacctgtcc ctgctggtgg acctcgggca
     5461 gtcctacgag gccctggcga cggccatgcg ggcggcgctt ccggccgaag cactccagga
     5521 cctgcgctgt gtggatgtct tccgccacaa gagcctgccc ccgggccggc aggcctggct
     5581 catgcgcctg cggttccagg cggaccggac ccttgtgggg gccgaggtgg atggctggat
     5641 ggccgcagcg ctggccgcgg cggaggccct cggggcgcag ctccgggcgt aagatgagtt
     5701 ctttgaggct tccatggacc ttctgaaaca actcgaagca aagatgcagg ccctcgtcca
     5761 gcagcgcaac cagctgaagg aagagctgga tgcgctgaag gcggcggggt ccgccgacag
     5821 ccaggaactg cagaccctcc ggacccgcct ggaggatgcc ctggccgaga aggtgaccct
     5881 ggagaaggac cgcgaagccg taaaagagca ggtggcggcg atcctgcggg ccctggaggc
     5941 cctgggatga agtcccagcc gcccctgccg ggtgtccggg ccgccacggt gtccgtcctg
     6001 gggcaggagc tccaggtcca gaccgaccgg cccgagaccc tggcggcggc ggtgcggatc
     6061 ctggaggata ccttccgcga catggactcc caatgccagg taagatgggg aggcgttccg
     6121 aagggcctgg acaccccgtc ctggtacctc ctgggcgccc tgaacctggc gcaccgcgtg
     6181 gcgcgcctgg agcaggaagc caaccagcac acccagaacc tggaacagac tctttcgaag
     6241 cttctgaacg atgttccgga cgaaccttcc gcccccgtgc ccttcctcgc cgaggacgga
     6301 gactgatttc cctgcgaggc ccgtgattat ggccaagcgc ttgttccgta agtcgacacg
     6361 ggagaccttc cccctgacct gtgcgttccg cgcgtcggcg cgccttagcc agggattctg
     6421 gtttcccccc tattaaacta gggaactcgg caagcctcca cgactgagcg gggatcttca
     6481 ttcatattct ggtgctggtg gctcttcgga tcccaattcc ctggagtcgc ccatgaacct
     6541 gatcagctgg atattcctca tcctcttctt cgccgccgcc ggcgtcggcc tcctgatggc
     6601 cctgcgggcc cagaaggcca cggtggaggc ctcgcaggcc caggcgcgcg cggaggcgga
     6661 tgtcaaagcc cagcgcgaaa agatgctcga ggaggcgaag cgggaggccc agcgcctccg
     6721 ggagcgcggg gagcaggagg ccgaggccct ccgcaaggaa tccgagctca aggtgaagga
     6781 gcaggccctc caggcgcgtc aggaggccga gaagctgctg gccgaacggc aggccaacct
     6841 ggagaagcag gagcagcggc tgctgtccaa ggaaacgggc ctccagtcca aggaggaggg
     6901 gctggacaag aagctccagc aggtggagca gaagaccaag gatgtggagg ccctgaccga
     6961 aaagcgcaag gccgagctgg agaagctgga ggcccagcag gctgaggcca ggcagctggt
     7021 ggaggcccag gccaagcggc tcgaggaggt cgcgggcctc acccgggagg acgccaagaa
     7081 ggaattgacc agccagcttg aatacgccgc caagatggac gccgccaagc tggtgcgccg
     7141 catcgacgag gaggcccagg aggaggccgc caagaaggcc cgctggacca tcggcgccgc
     7201 catccagcgg gtggcctcgg acgtggtgac cgagcaggcc gtgagctctg tccagctgcc
     7261 cagcgatgac ctcaaggggc gcatcatcgg ccgcgagggt cgcaacatcc gggccctgga
     7321 gaaggccacc ggctgcgacc tcatcgtgga cgacacgccg gagagcatcg tggtatcgag
     7381 cttcgatccc atccgccgcg aagtcgcgcg gcaggccatc ctcaagctcc tggctgacgg
     7441 ccgcatccac cccgcccgca tcgaggaggt ggtggagaag gtcaaggtgg acatggacca
     7501 gcatctcaag gagatcggcg aagccgcctg catcgagctg ggcttccccg acgtccatcc
     7561 caagctgcac aagctggtgg ggcgcctgaa ctaccgcacc tcgtacggcc agaacgtgct
     7621 ggagcacacc aaggaagtgg cgcgcatcgc cgagtacatg gcgggcgaga tgggcgcgga
     7681 tgcccggctc tgccgccgcg cggggctctt ccacgacatc ggcaaggcca tcgaccgcga
     7741 ggtggagggc acccacatcg agatcggcat gcagctcatg cagcgctacg gggagaagga
     7801 agaggtcatc catgccatga gctgccacca cggggacttc gagccccgca cggtggaggc
     7861 catgctcatc acggccgcgg acgccctcag cgcggcgcgc cccggcgccc gccgcgagat
     7921 gctggagacc tacgtcaagc gcctggag
//
LOCUS       DASUDT010000285         2409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_698503, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000285 DASUDT010000000
VERSION     DASUDT010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698503"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1439
                     /gene="uraA"
                     /locus_tag="VFV26_05860"
     CDS             159..1439
                     /gene="uraA"
                     /locus_tag="VFV26_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HEX4845725.1"
                     /translation="MLRRTIDVDERLPLLQTVPLSLQHLFAMFGATVLVPFLFKVNPA
                     TCLLMNGVGTLIYLFVAKGRIPAYLGSSFAFLSPVFAVLAAGLSYSAAQGGFIVFGLI
                     FILLSQVVRVAGTRWIDILFPPAAMGAIVAIIGLELAPVATNMAGLTAGPAVLGMPLR
                     LALVVSLSTLAVTILASILLRGFLAVIPVLLGVVAGYLMALGLGVVDFQAVRLAPWFQ
                     VPTLYAPTYNLQAILIILPASLVVLAEHVGHLVVTGNIVGKDLMKEPGLHRSLLGDGL
                     SNVLSGLVGATPNTTYGENIGVMAITKVYSVWVIGGTACIAILVSFSGKLAALIQSIP
                     VPVMGGVCILLFGVIAAAGIRMLIEKKVDYTQSRNLILTSVVLISGISGAAVKLGTVE
                     LKGMALGTVVAIVLSLLFWGLDHLGLSNDTSTQQ"
     gene            1468..>2409
                     /locus_tag="VFV26_05865"
     CDS             1468..>2409
                     /locus_tag="VFV26_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEX4845726.1"
                     /translation="MERFFKLKARGTTVATEVLAGTTTFISMAYVISLIPNAFLKVAG
                     IEPGVGFTAFVVCAILSTLIGAFYANLPIAFASGIGLSAFFAFTVCAPANQGGMGYTI
                     QVALTALLLEGLVFIALSAMKTREAFMDAIPFSLKKGISVGIGLFIAIIGFVDSGVTQ
                     VGLKFDADTIFPILKNDPSALFGLHDVNNLFIAKFWDHGHVTPAFWSVVGLFLIAVLV
                     AKRVKGAILLGILAITLVGLLPVSWGGGFTHLPKGAIFQLPSWPTMFQYDWSWTKSLS
                     GMLNIFIILFTLLFVDMFDTIGTLMGIGAQGKMLDKEG"
BASE COUNT          339 a          903 c          697 g          470 t
ORIGIN      
        1 ccggggttgt cacccgcaaa atgtgatccc gacccaccgg gggggcggaa caatgaacca
       61 tcccctgtcc ctccggatca gcgtggaccc ggctccgggc ccatgacacg ggcgcacgct
      121 ccatcgcgcc gccggatttc ccacccgccg aggctcccat gctgcgccgc accatcgacg
      181 tcgacgaacg cctgcccctg ctgcagaccg tgcccctgag cctccagcac ctcttcgcca
      241 tgttcggcgc cacggtgctg gtgcccttcc tcttcaaggt gaaccccgcc acctgcctgc
      301 tcatgaacgg cgtgggcacc ctgatttacc tcttcgtggc caagggccgc atccccgcct
      361 acctgggctc cagcttcgcc ttcctctcgc cggtcttcgc ggtgctggcg gcgggcctga
      421 gctattccgc cgcccagggc ggcttcatcg tcttcggcct catcttcatc ctgctgtcgc
      481 aggtggtgcg cgtggcgggc acgcgctgga tcgacatcct cttccccccg gccgccatgg
      541 gcgccatcgt ggccatcatc ggcctggaac tggcccccgt ggccaccaac atggcgggcc
      601 tcaccgccgg ccccgcggtg ctgggcatgc ccctgcgcct ggcgctggtg gtctcgctct
      661 ccaccctggc cgtcaccatc ctggcgtcca tcctgctgcg cggcttcctg gcggtgatcc
      721 cggtcctgct gggcgtcgtc gcgggctacc tcatggccct ggggctcggc gtggtggatt
      781 tccaggcggt gcgcctggcg ccctggttcc aggtgcccac cctctacgcg cccacctaca
      841 acctgcaggc catcctcatc atcctgcccg cctcgctggt ggtgctggct gaacatgtgg
      901 gccacctggt ggtgaccggc aacatcgtgg gcaaggacct catgaaggag cccgggctcc
      961 accgctccct gctgggcgac gggctctcca acgtgctctc cggcctcgtg ggcgccacgc
     1021 ccaacaccac ctacggtgag aacatcggcg tcatggccat caccaaggtc tacagcgtgt
     1081 gggtcatcgg cggcacggcc tgcatcgcca tcctggtgtc cttctccggc aagctcgcgg
     1141 cgctcatcca gagcatcccc gttcccgtca tgggcggcgt ctgcatcctg ctcttcggcg
     1201 tcatcgccgc cgcgggcatc cgcatgctca tcgagaagaa ggtggactac acccagtccc
     1261 gcaacctgat cctcacctcc gtcgtcctca tcagcggcat cagcggagcg gcggtgaagc
     1321 tgggcaccgt ggaactcaag ggcatggcgc tgggcacggt ggtggccatc gtcctcagcc
     1381 tgctcttctg gggcctggac cacctgggcc tcagcaacga caccagcacg cagcagtgat
     1441 cccttctttc tttttccgga ggtcagcatg gaacggtttt tcaaactgaa ggcgaggggc
     1501 accacggtgg ccacggaggt gctcgcgggc accaccacct tcatctcgat ggcctacgtg
     1561 atctcgctga tccccaacgc cttcctcaag gtggcgggca tcgagcccgg cgtgggcttc
     1621 acggccttcg tggtctgcgc catcctttcg accctcatcg gcgcgttcta cgcgaatctg
     1681 cccatcgcct tcgcctcggg catcggcctc tcggccttct tcgccttcac ggtctgcgcc
     1741 ccggccaacc agggcggcat gggctacacc atccaggtgg ccctcacggc cctgctgctg
     1801 gagggcctcg tcttcatcgc cctcagcgcc atgaagaccc gcgaagcctt catggacgcc
     1861 atccccttct ccctgaagaa gggcatctcc gtgggcatcg gcctcttcat cgccatcatc
     1921 ggcttcgtgg attccggcgt cacccaggtg ggcctgaagt tcgacgccga cacgatcttc
     1981 cccatcctca agaacgatcc ttcggccctc ttcggcctgc atgacgtgaa caacctgttc
     2041 atcgcgaagt tctgggacca cggccatgtc acccccgcct tctggtccgt ggtggggctc
     2101 ttcctcatcg ccgtgctggt ggccaagcgc gtgaagggcg ccatcctcct gggcatcctg
     2161 gccatcaccc tggtgggcct gctgcccgtg agctggggcg gcggcttcac ccacctgccc
     2221 aagggcgcca tcttccagct ccccagctgg cccacgatgt tccagtacga ctggagctgg
     2281 accaagtccc tcagcggcat gctgaacatc ttcatcatcc tgttcaccct gctcttcgtg
     2341 gacatgttcg acaccatcgg caccctcatg ggcatcggcg cccagggcaa gatgctggac
     2401 aaggagggc
//
LOCUS       DASUDT010000286         3725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1803479, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000286 DASUDT010000000
VERSION     DASUDT010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803479"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VFV26_05870"
     CDS             <1..514
                     /locus_tag="VFV26_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845727.1"
                     /translation="AESVAQSEEALQAILESVGEMDSVVESILSETLQQGGQASLIHE
                     ANRNIHQQVETIRSVMAEQQQTSNYILSLAMNVQEATSVVRDSTREQSTGSDEIARAT
                     EQVRALASSLHEILARQENHVLSLKETMNRVLGKALEGERAIGASSGAVEQLGVQVHM
                     LNREVNLFKL"
     gene            554..2224
                     /locus_tag="VFV26_05875"
     CDS             554..2224
                     /locus_tag="VFV26_05875"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845728.1"
                     /translation="MYRLSIKTKLSAVISILVLSFIAFNLLYYPRWVERQIRTQAELS
                     ARQVAETASYALGPAVSAGNTRDIAKVLQGVQNIPSFRFSAVYGAGGEALDSTPTTPD
                     WATGQVLKEGISHTYTHRESSMLVAVAPVFYEEPRADQVGTLVIGFTTEGTQRAVREN
                     IRASLAVGLVTLVLGILVAVLLSNRYLRPVIQLTEAAQKVAQGNLETVSVKVSTRDEI
                     QDLSHSFEVMTDKLRVSRDEIERQNRLLEYRVQERTRQLMETIWELEEIRANLEQLVQ
                     ERTRGLEQSRVELKAWAGTLEEKVQEKTQELRELNESLLTSFQKLKEVDRLKDEFLAN
                     MSHELRTPLNSIIGFSGMLMQDPEGRLGLEAREDLQIIYQNGRSLLGLIDSILDLSKI
                     EAGKMELELEEVDPVPLLDDVKAMAAGLIHDRPITIEYVRPEGPLRVMGDRDRLRQVF
                     TNLVGNAIKFTEAGSVRISAESAAGRFRVRIEDTGIGMSEEELERLFKPFQQVDGSIT
                     RRFGGTGLGLAISQRFMGLMDGRISATSRKGEGSAFVVDMPLAAGRAA"
     gene            2221..>3725
                     /locus_tag="VFV26_05880"
     CDS             2221..>3725
                     /locus_tag="VFV26_05880"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845729.1"
                     /translation="MNGESQKILCIEDNAMNWRLVQRLLSQAGFEAHWADDGLRGYDM
                     AVRLKPALILLDINLPGLSGFEVATKLRQNPDMNGTLIVALTAKTMRSDRETALVTGC
                     DGFISKPIDPFLFVGQVESYLGGQRDRLEQGREGAALRQFTHQVVEHLEAQLREAQEG
                     NRKLLEAQGALEQRSHHLSRLLALSKDLISLRDADEILSRVLDQLRQELHLERLTAYR
                     LHSSGAYFQGRAWGTSGFQDTPVLPKEHPFAIVSEALPGSLLLNAELRQTAAWEQGID
                     LGLWDPKAQALLLPLRSRSGEDGLWGVLAADRAGQAFQAIEMELAALYAGTLQVSLEN
                     AELIAHLDETSQALGTSYEGLESAYVALKDAQKALGAQDRKTALGGLFQQMAQRIQVP
                     VRVLKEESHNLSVHMERADVPPFQEREVCHRSMETIRRAISQVDDLVRALMRRAGQVE
                     AAAPEWIHLHDLMRQELEIFQAEGTLSGDVPLELNLQAPRDLLYGVYTDFS"
BASE COUNT          686 a         1234 c         1260 g          545 t
ORIGIN      
        1 cgccgaatcc gtggcccaga gcgaggaggc cctccaggcg atcctcgaat ccgtgggcga
       61 gatggacagc gtggtggaga gcatcctcag cgagaccctc cagcagggcg gccaggcctc
      121 cctcatccac gaggccaacc gcaacatcca ccagcaggtg gagaccatcc gctcggtcat
      181 ggccgagcag cagcagacca gcaactacat cctgtcgctg gccatgaatg tccaggaggc
      241 caccagcgtg gtccgggatt ccacccggga acagagcacg ggcagcgacg agatcgcccg
      301 ggccacggag caggtgcggg ccctggccag cagcctgcac gagatcctgg cccgccagga
      361 gaaccatgtg ctgtccctga aggagaccat gaaccgggtg ctggggaagg ccctggaagg
      421 cgagcgggcc atcggcgcct ccagcggcgc cgtggagcag ctgggcgtcc aggtccacat
      481 gctcaaccgg gaagtgaacc tcttcaagct gtagcgctac tgctaggctg gagccgatcc
      541 cggacttccc cctatgtatc gcttgtccat caagaccaag ctgagcgctg tcatcagcat
      601 cctggtcctt tcgttcatcg ccttcaacct gctctactac ccgcggtggg tggagcggca
      661 gatccgcacc caggcggaac tgagcgcccg ccaggtggcc gagacggcca gctatgccct
      721 ggggcccgcg gtgagcgccg ggaatacccg ggatatcgcc aaggtgctcc agggcgtgca
      781 gaacatcccc tccttccgct tcagcgccgt ctacggcgcc ggcggagagg ccctggacag
      841 cacgcccacc acccccgact gggccacggg ccaggtgctg aaggagggca tctcccacac
      901 ctacactcac cgggagagca gcatgctggt ggccgtggcc ccggtcttct acgaggagcc
      961 gagggcagac caggtgggca ccctcgtcat cggcttcacc accgagggca cccagcgggc
     1021 cgtgcgggag aacatccggg ccagcctcgc cgtgggcctg gtgaccctgg tgctcggcat
     1081 cctcgtggcg gtgctgctat cgaaccgcta cctccggccc gtgatccagc tcacggaggc
     1141 cgcccagaag gtggcccagg ggaatctgga gacagtgtcg gtgaaggtct ccacccggga
     1201 cgagatccag gatctgagcc attccttcga agtcatgacg gacaagctcc gggtctcccg
     1261 ggacgagatc gagcgccaga accgcctgtt ggaataccgg gtgcaggagc gcacgcggca
     1321 gctcatggag accatctggg aattggagga gatccgggcc aacctcgaac agctggtcca
     1381 ggaacgcacc cggggcctgg agcagagccg ggtggaactc aaggcctggg cgggcaccct
     1441 ggaggagaag gtccaggaga agacccagga attgcgggag ctgaacgaaa gcctgctcac
     1501 cagcttccag aagctgaagg aggtggatcg cctgaaggac gagttcctgg cgaacatgag
     1561 ccacgaactg cgcacgcccc tgaattccat catcggcttc tcggggatgc tcatgcagga
     1621 tccggaagga cgcctggggc tggaggcgag ggaggatctc cagatcatct accagaacgg
     1681 gcggtccctg ctggggctca tcgattccat cctcgatctc tcgaagatcg aggcgggcaa
     1741 gatggaactg gagctggagg aggtggatcc cgtgccgctg ctggacgacg tgaaggccat
     1801 ggccgccggg ctcatccacg accgccccat caccatcgaa tacgtgcgcc ccgaaggccc
     1861 cctgcgggtc atgggggacc gcgaccggct ccggcaggtc ttcaccaacc tggtgggcaa
     1921 cgccatcaag ttcacggagg cgggatcggt gcgcatctcc gcggaaagcg ccgcgggccg
     1981 cttccgggtc cgcatcgagg acacggggat cggcatgtcc gaagaggaac tggaacgcct
     2041 cttcaagccc ttccagcagg tggacgggag catcacccgg cgcttcggcg gcacggggct
     2101 gggcctggcc atcagccagc ggttcatggg gctcatggat ggccggatct cggccaccag
     2161 ccgcaagggg gaaggcagcg ccttcgtggt ggacatgccc ttggctgccg ggagggccgc
     2221 atgaacggcg agtcccagaa aatcctctgc atcgaggaca acgccatgaa ctggcgcctg
     2281 gtccagcggc tgctctccca ggccggtttc gaggcccatt gggccgatga cggactccgg
     2341 ggctacgaca tggccgtccg gctcaaaccc gccctgatcc tgctggacat caacctgccg
     2401 ggcctgtcgg gattcgaggt ggccaccaag ctccgccaga atccggatat gaatggaacg
     2461 ctgatcgtgg cgctcaccgc caagaccatg cgcagcgacc gggaaacggc cctggtgacg
     2521 ggctgcgatg ggttcatctc caagcccatc gaccccttcc tcttcgtggg ccaggtggaa
     2581 tcctacctgg ggggccagcg cgaccgtctt gagcagggcc gggaaggggc ggcgctgcgg
     2641 cagttcaccc accaggtggt ggaacacctc gaggcccagc tccgggaggc ccaggagggc
     2701 aaccggaagc tcctggaggc ccagggcgcc ctggagcagc gcagccacca cctctcccgc
     2761 ctcctggccc tcagcaagga cctcatctcc ctccgggatg cggacgagat cctttcgcgg
     2821 gtcctggacc agctgcgcca ggaactccac ctggagaggc tcacggccta ccggctccat
     2881 tcgagcgggg cctatttcca ggggcgcgcc tgggggacct cggggttcca ggacacgccg
     2941 gtgctgccga aggaacaccc ctttgccatc gtgtcggagg ccctgccggg cagcctgctc
     3001 ctgaatgcgg aactccggca gacggccgcg tgggagcagg ggatcgatct cggcctgtgg
     3061 gaccccaaag cccaggcgct gctgctcccc ctccgcagcc ggtcggggga ggacggtctg
     3121 tggggcgtcc tggccgcgga ccgcgccggc caggccttcc aggccatcga gatggaactg
     3181 gccgccctgt atgcgggcac cctccaggtg agcctggaga atgcggagct catcgcccac
     3241 ctggacgaga ccagccaagc cctcggcacc agctatgagg ggctggagtc cgcctacgtg
     3301 gccctgaagg atgcgcagaa ggccctgggc gcccaggacc ggaagacggc tctgggcggt
     3361 ctcttccagc agatggccca gcgcatccag gtgccggtcc gggtcctgaa ggaggaaagc
     3421 cacaacctgt ccgtccacat ggagcgggcc gatgtgccgc ctttccagga acgggaggtc
     3481 tgccaccggt ccatggagac gatccggcgg gccatctccc aggtggatga cctggtgcgc
     3541 gcgctgatgc ggcgggcagg ccaggtcgaa gccgccgccc cggaatggat ccacctgcac
     3601 gacctgatgc ggcaggagct ggagatcttc caggcggaag gaaccctgtc cggggatgtg
     3661 cccctggagc tcaacctcca ggcccccagg gacctcctgt acggcgtgta cacggatttc
     3721 tcgga
//
LOCUS       DASUDT010000287         2440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_698513, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000287 DASUDT010000000
VERSION     DASUDT010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698513"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..734)
                     /locus_tag="VFV26_05885"
     CDS             complement(<1..734)
                     /locus_tag="VFV26_05885"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX4845730.1"
                     /translation="MSDTAHPLTTAGNLPAPNWHATHQEAQERLTRMASGLASSDWEA
                     VDAGARWIFEVLKPHNEAEERELFPLLEEIGAESLHQRLHEDHRQMWDLTLQLLAEIN
                     EGQVRAPRSLTLLGQRLVDLIRDHIDAEEQLMLPLLKGKSLYASDAETQDGYLILEKK
                     LIAPETWSFIVQAPQVARGRKPGQFFMVAPFPESERIPLTLAGGDARRGYIHFIMQEV
                     GSTTKAMGKLSAGDRLYAVAGPMGTPT"
     gene            complement(901..>2440)
                     /locus_tag="VFV26_05890"
     CDS             complement(901..>2440)
                     /locus_tag="VFV26_05890"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845731.1"
                     /translation="QAHGMNLSLFEALRRNRSHLDNTPLAAIETDAAFKIREWNPSAE
                     RIFGYTREEALGQDPRMLIPPERQGEVERRRKDLAGSAEGFRVTLENVTRTGHRIICD
                     WYNTALRDEQGRFMGTFFLADDVTERRRAEAALRQAQKLESLGVLAGGIAHDFNNLLT
                     AILGNTEVALERTRDNPVLQQVLHRVEATTQRGSDLARQLLAYAGKAHFAVRPLDLNA
                     IILEMGDLLSVSISKKVAIRRDLQPGIPPVEADAAQFQQVVMNLVINASEAIGERAGQ
                     ITLRTRAVELSQAELAAGFPGQVLEPGLYVRLEVEDDGCGMDVDTIGRIFDPFFTTKF
                     TGRGLGLSAMLGIVRGHRAGIHVESAFGKGTTFTLLFPATEATVVTPPPAAEPQTKAS
                     GTILVVDDEALIRDLACSALETAGFQVLEARDGQEAVELFQAGQTHVDLVLLDMTMPR
                     MGGAEAFRLIRNLAPGVRVLLTSGYTQKESLEDLADLPPDGFLQKPFRVRELVARTRD
                     ILAG"
BASE COUNT          364 a          756 c          890 g          430 t
ORIGIN      
        1 gtaggggtgc ccatgggacc ggccacggca tagaggcggt cgccggcgct gagcttgccc
       61 atggccttcg tggtggaacc cacctcctgc atgatgaagt ggatgtagcc gcggcgggca
      121 tcgccgccgg ccagggtgag ggggatgcgc tcgctctcgg ggaagggcgc caccatgaag
      181 aactggccgg gcttgcggcc ccgggccacc tggggggcct gcacgatgaa ggaccaggtc
      241 tcgggggcga tgagcttctt ctcgaggatc aggtagccgt cctgggtctc cgcgtcggag
      301 gcgtagaggg acttgccctt gagcaggggc agcatgagct gctcctcggc gtcgatgtga
      361 tcgcggatca ggtccaccag gcgctggccc agcagggtca gcgagcgggg ggcccgcact
      421 tggccttcat tgatttccgc gagcagctgg agggtgaggt cccacatctg gcggtggtcc
      481 tcgtggagcc gctggtgcag ggattccgcc ccgatctcct ccagcagggg gaagagctcc
      541 cgctcctcgg cctcgttgtg gggtttcagc acttcgaaga tccagcgggc cccggcatcc
      601 acggcctccc agtcgctgga agccaggccc gaggccatgc gggtcaggcg ttcctgggcc
      661 tcctggtggg tggcatgcca gttcggcgca ggcaggtttc cggcggtggt cagcggatgg
      721 gccgtgtcgg acatggaagc ctccagatcc gttcagcatg cgatgagcgc aggggtattt
      781 ctgtgtctaa aaacctaatc gggaacagtt gtgatgcatg ccacaggggg cttgaatctc
      841 aaggacttag ttaagccatt tgccattctt gatggatcat ctggttgtgt ggatccagcc
      901 ctaaccggcg aggatgtccc gggtcctggc caccagttcc cgcacccgga agggtttctg
      961 caggaaaccg tccggaggca ggtccgccag gtcctccagg gattccttct gggtgtatcc
     1021 gctggtgagg aggacgcgga cccccggggc caggttgcgg atcaggcgga aggcctcggc
     1081 gccgcccatg cggggcatgg tcatgtccag cagcaccagg tccacgtggg tctggcccgc
     1141 ctggaagagt tccaccgcct cctggccatc ccgggcctcc agcacctgga agccggccgt
     1201 ctccagggcg ctgcaggcca ggtcgcggat gagggcttcg tcgtccacca cgaggatggt
     1261 gcccgaggcc ttggtctggg gttcggctgc cgggggaggg gtgaccacgg tggcttccgt
     1321 ggcggggaag agcagggtga aggtggtgcc cttgccgaag gcgctttcca cgtggatgcc
     1381 cgcccggtgg ccccggacga tgcccagcat ggcggagagg cccaggcccc ggcccgtgaa
     1441 cttggtggtg aagaagggat cgaagatgcg gccgatggtg tccacatcca tgccgcagcc
     1501 atcgtcctcc acttccaggc gcacgtagag gccgggctcc agcacctggc cggggaatcc
     1561 ggcggccagc tcagcctggc tgagctccac ggcccgcgtg cgcagcgtga tttggcccgc
     1621 gcgctcgccg atggcttcgg aggcgttgat gaccaggttc atcaccacct gctggaactg
     1681 ggccgcatcg gcttccacag gggggatgcc gggctggagg tcccggcgga tggccacctt
     1741 cttggaaatg gagaccgaaa gcaggtcgcc catctcgagg atgatggcgt tcaggtccag
     1801 gggccgcacc gcgaagtggg ccttgccggc gtaggccagg agctggcggg ccaggtccga
     1861 cccgcgctgg gtggtggcct ccacccggtg gagcacctgc tggagcaccg ggttgtcccg
     1921 ggtccgctcc agggccacct cggtgttgcc caggatggcg gtgagcaggt tgttgaaatc
     1981 atgggcgatg cccccggcca ggacgccaag gctttccagc ttctgggcct ggcgcagggc
     2041 ggcctcggcc cggcgccgct cggtgacgtc gtcggccagg aagaaggtcc ccatgaagcg
     2101 gccctgctca tcccgcaggg cggtgttgta ccagtcgcag atgatccgat ggcccgtgcg
     2161 ggtgacgttc tccagggtga cccggaaccc ctcggcactg ccggccagat ccttccgccg
     2221 ccgctccact tcgccctggc gttcgggggg gatgagcatt cggggatcct gccccagggc
     2281 ctcttcgcgc gtgtagccga agatccgttc cgccgatgga ttccattcgc ggatcttgaa
     2341 cgcggcatcg gtctcgatgg cggccagggg ggtgttgtcc aggtggctgc ggttccgccg
     2401 gagggcctcg aacagggaca gattcatgcc atgggcctgg
//
LOCUS       DASUDT010000288         2631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1670697, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000288 DASUDT010000000
VERSION     DASUDT010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670697"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VFV26_05895"
     CDS             complement(<1..449)
                     /locus_tag="VFV26_05895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845732.1"
                     /translation="MSLASTQRILLVEDEPGLREVLTLALEGAGFGCEAVAGIEEAQR
                     ALREASFDGVLSDLKLKDGSGIELLAWMNEQALETPVVIMTAYATTETTVAALNQGAV
                     DFITKPFKHEDMIATLKGLLAATEPEGPPPQDLGELVGVGPVMRKINA"
     gene            513..1619
                     /locus_tag="VFV26_05900"
     CDS             513..1619
                     /locus_tag="VFV26_05900"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX4845733.1"
                     /translation="MKHVVFAHRKLSFGGGERVLIEQVAALAGLPVKVSVIFRKEPGK
                     RDIEAELRQRNPNVAEVLHLPGALEAGRWLWRTRPDLLVLCNHKGVQRALPWLARFGL
                     RLPLVPVLHEHYERHLRKYRGVRNLVDRWICTYDFTAAVREQLSGAPCSIIHPLYPRP
                     EAAAVAPEGRLAARRHLGLPGTGPVVGYVGQIDGRKDPLSVLRFAEALGGGASLLFAG
                     REEPGTAAALQAAVEASPLRDRTRRLGPLADLGPAFAALDLYVMTSRNEGFFPLALIE
                     ALERGVPVLAPTVGGIGSVMKDGEGGFLIPKPDDRRAIPQDLLEAAARRLAPLLADGA
                     AWEAQRAKAHAFGTALTRDYDAAAKFREAVAAWL"
     gene            1610..2569
                     /locus_tag="VFV26_05905"
     CDS             1610..2569
                     /locus_tag="VFV26_05905"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX4845734.1"
                     /translation="MAVIPEQATWVRFPRYIGDAVMQMSVLRLLRLVDPAPLVVWGPG
                     LTVALVEGTGLADAVCRDRGKPSPWELADTLKRHRAARSVHFPKSLRPALGAFLARVP
                     ERIGVSESLAGLFNTHSLPFWKGEGHCLDRYHKVLRLRWPGAPAMPMADYTSPFQAEL
                     PDHPYVCLMPGASTAAKAWEPEHFRETARLLSARGLLPVVLGGPAERELGAFVAGDHG
                     LNRCGDTLVEAAAWMQGASGAVGNDSGLSHLAAACGTPVLVLYGPMDPGMFTPFGPAV
                     RTVQRDPLPCMPCGKDHCRVAGHPCLRDLTPGRICAELEPLLR"
BASE COUNT          348 a          989 c          895 g          399 t
ORIGIN      
        1 gcattgatct tccgcatgac cgggcccacg cccaccagct cgcccaggtc ctggggcggg
       61 gggccttcgg gctccgtcgc ggccagcagg cccttgaggg tggcgatcat gtcctcgtgt
      121 ttgaagggct tggtgatgaa gtccacggcc ccctggttga gggccgccac ggtggtctcc
      181 gtggtggcgt aggcggtcat gatgaccacc ggcgtctcca atgcctgctc gttcatccag
      241 gccagcagtt cgatgccgga accgtccttg agcttcaggt ccgaaagcac gccatcgaag
      301 ctggcctccc gcagggcccg ctgggcctcc tcgatgcccg ccaccgcctc gcaaccgaac
      361 cccgcgcctt ccagggccag ggtcaggacc tcccggagac cgggttcgtc ttccaccagc
      421 aggatccgtt gggtcgaggc gagggacatg gcagccttgg gaagtgacgc attaggtcag
      481 ctatcctatc ttgaatcctt tcctggagtc ccatgaagca cgtcgtgttc gcccaccgga
      541 agctgtcctt cggcggcggc gagcgggtgc tcatcgagca ggtcgcggcc ctggcgggcc
      601 tgcccgtgaa ggtctccgtg atcttccgca aggaacccgg aaagcgcgat atcgaagccg
      661 agctccgcca gcggaacccg aacgtggccg aagtgctcca cctgccgggc gccctggagg
      721 ccggccgctg gctctggcgg acccgtcccg atctgctggt gctctgcaac cacaagggcg
      781 tccagcgcgc cctgccctgg ctggcccgct tcggcctccg cctccccctc gtccccgtcc
      841 tgcacgagca ctacgagcgc cacctgcgca agtaccgcgg cgtgcggaac ctcgtggacc
      901 gctggatctg cacctacgat ttcacggcgg cggtgcggga gcagctcagc ggcgccccct
      961 gcagcatcat ccaccccctc tatcccaggc cggaggccgc ggcggtggcg ccggagggcc
     1021 gcctcgcggc gcgccgccac ctgggcctgc ccggaacggg ccccgtggtg ggctacgtgg
     1081 gccagatcga tggccgaaag gatcccctgt ccgtccttcg ctttgcggag gccctgggcg
     1141 gaggcgcctc cctgctcttc gccgggcggg aggaacccgg caccgccgcc gccctccagg
     1201 ccgccgtgga ggcctcgccc ctccgggacc gcacccgccg cctggggccc ctggccgacc
     1261 tgggccccgc cttcgcggcc ctggacctct acgtgatgac cagccgcaac gagggtttct
     1321 tccccctcgc cctcatcgag gccctggagc ggggcgtgcc ggtgctggcc cccaccgtgg
     1381 gcggcatcgg gtcggtgatg aaggacggcg agggcgggtt cctcatcccc aagcccgatg
     1441 accggcgggc cattccgcag gatctgctgg aagccgccgc ccgccgcctg gcgcccctgc
     1501 tggcggatgg cgccgcctgg gaggcccagc gcgcgaaggc ccacgccttc ggcacggccc
     1561 tcacccggga ctacgatgcc gcggcgaagt tccgcgaagc ggtggccgca tggctgtgat
     1621 ccccgagcag gccacctggg tgcgcttccc gcgctacatc ggcgacgcgg tgatgcagat
     1681 gtcggtcctc cgcctcctgc gcctggtcga cccggccccg ctggtggtgt ggggccccgg
     1741 gctcaccgtc gccctggtgg agggcaccgg gctggccgat gcggtctgcc gggaccgggg
     1801 caaaccgagc ccctgggagc tggccgatac cctgaaacgc caccgggcgg cgcgcagcgt
     1861 gcatttcccg aagagcctga ggcccgcgct gggggccttc ctggcccggg ttcccgagcg
     1921 gatcggcgtc agcgaaagcc tggccggcct cttcaacacc cattccctgc ccttctggaa
     1981 gggcgaaggc cactgcctgg accgctacca caaggtgctc cgcctccgct ggcccggagc
     2041 ccccgccatg cccatggcgg actacacctc gcccttccag gcggaactgc cggaccatcc
     2101 ctacgtctgc ctcatgcccg gcgcctccac cgcggccaag gcctgggagc ccgagcattt
     2161 ccgggagacg gcccggctgc tcagcgcccg cggcctcctg cccgtggtgc tgggggggcc
     2221 cgcggagcgg gagctcgggg ccttcgtggc cggggaccac ggcctgaacc gctgcggcga
     2281 caccctggtg gaagccgccg cgtggatgca gggggcctcg ggcgccgtgg gcaacgattc
     2341 aggcctcagc cacctcgccg cggcctgcgg aacccccgtg ctggtgctgt acggccccat
     2401 ggatcccggc atgttcacgc ccttcgggcc cgccgtccgg acggtccagc gggatcccct
     2461 gccctgcatg ccctgcggga aggaccactg ccgcgtggcg ggccacccct gccttcggga
     2521 cctgacgcct gggcgcatct gcgccgagct ggagccgctc ctgcgctgaa ggtgcggaat
     2581 cataccaagt ggcgttcaaa gatagagatt caccacggag acgccgaggc c
//
LOCUS       DASUDT010000289         5173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_698623, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000289 DASUDT010000000
VERSION     DASUDT010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5173
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698623"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2600
                     /locus_tag="VFV26_05910"
     CDS             <1..2600
                     /locus_tag="VFV26_05910"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEX4845735.1"
                     /translation="MADGRERPIEKVAPGDLIMAGHGSGVFRPAKVMKAATRSRQGQG
                     IRITTASGRVLTSTPEHIHLAGYRLGATPQLHFVYLMRKQVPERGSIWRLGTSQTHTR
                     GQVKPVVGFLQRARQEHADELWVVSTHDSEQEARLQEAVWSLQYQLPTLPFVPRKGGS
                     IKGLVHDAEAIRRVFAAVDSQSGAERLLADLGMAVEAPHHRAQASDGLRRQVTVTLCG
                     DRRGKRPMHRISMTGRSAEDRRVLEGLGLSVRPAKAGSSSWRMETCAASFKDIRKMAD
                     RIRKHLDAEILLQARLGASPGRETSSLPFLPACNLKPGMALFDGAGGLDVVDRVERVT
                     LTAEVHDLDIEGVHNFVADGLVTHNSIYGWRGADIRNILDFQQDFPEAVRIELLQNYR
                     STKKILDAASEVIANNSQRVEGKGALVTDLGEGESITFKLADEGRLEAEWVAQRIQEL
                     RYREPEAKLAVLYRANWQSRQMEEALRAQNMAYRLVGGVKFYERQEVKDLISYLRLIS
                     NPFDLVSFRRCVNAPTRGVGPTTLGKIEGAIPEGGTPLEGLALLLRSGELKGRAQREL
                     GKFLDLFRRAAGERDAQGLAGLVKWTLQESGYLQSLEDEATLEAEGRIRNLEEFLSAA
                     AESESLGLRLSEFLDRITLASDTDQLEEAAHLSLMTIHCAKGLEFPFVFVIGMEEDVF
                     PNRNARETPEGLEEERRLFYVAITRAQRRLTLSAARRRRIMGTEMLSMPSRFLREIPA
                     EALTAPIRWGTEIYQSGEGVRPGSSFSREGGGGASVATELQRIRSFFDRVKEVPPPVP
                     DGGRLSEPAEQKDPSAFEAGTRVRSARFGAGTVLAFSGRGDGLTYTIRFDQGGDRRIM
                     ARFGGLERA"
     gene            complement(2664..3581)
                     /locus_tag="VFV26_05915"
     CDS             complement(2664..3581)
                     /locus_tag="VFV26_05915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEX4845736.1"
                     /translation="MGTSGLNRVVVAGGTGLVGRPLVQALTDRGAHVAVLTRNPGTLR
                     LPAGAAAHGWENLRALLEGADVVINLAGEGIADRRWSAARKAAIQDSRLGTTARLVEA
                     MRICARPPAALVNASAIGYYLPQGEAIVDEEAGPGQGFLAEVCQRWEAEAMAALAFGV
                     RVARLRIGVVLAREGGALPKMALPVKAYAGCKLGTGRQGFSWIHLDDLVAMLVEAALN
                     PAWEGPFNATAPAPLSNGAFTRLLARRLHRPLLPVPGFLTTAATKLLLGEMAEALLLQ
                     GALVIPARAQALGFQFRFPTAASALEDLL"
     gene            3722..>5173
                     /locus_tag="VFV26_05920"
     CDS             3722..>5173
                     /locus_tag="VFV26_05920"
                     /inference="COORDINATES: protein motif:HMM:NF044849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845737.1"
                     /translation="MRYLLSNLPLNLGEEALDLAKPLAHALGGAPKEYRAVTLERRSL
                     DARHKGAIRFLTALSFDSDRALELGPHPGGLKLDLAPPAAPYAVAQPPRKPRVVVVGS
                     GPAGTFCALRLLDYGIEPVVLERGPAMGERVKAIAGLWKDAVLDPEANAQFGEGGAGT
                     FSDGKLTTRIGHPATRYVLEAFVRFGANPRILYLAKPHVGTDVIRRCTVLIRKEAEAR
                     GARYRFKARLADVRFDDQGRVRAAVLADGEEIPCEALVLAPGHSARDTFEMLHGHGVA
                     MRQKPFAMGVRVEHPQDLIDRSQYGPSAGHPSLPAADYKLVCNFGLNRAAYSFCMCPG
                     GEVIQCSSEEGGVVVNGMSNEKRDSGFANSGLVAKVNTADFGSDHLLGGMYFQRKWEQ
                     AAFRAAGETYGAPAMAVQDFLKGRATGRLPRTSFRPFAVAADLRTCLPDFVREQLAGA
                     LPAFDRKIHGFASSQAILLAIESRTSSPIQLLRG"
BASE COUNT          798 a         1812 c         1829 g          734 t
ORIGIN      
        1 tcatggcgga tgggcgagag cggcccatcg aaaaggtggc gccgggggac ctgatcatgg
       61 caggccatgg cagcggggta ttccggcccg cgaaggtcat gaaggctgcc acccgatcgc
      121 gccagggcca gggcatccgc atcaccacgg cctcaggccg ggtcctcacc agtacgccgg
      181 agcacatcca cctcgcgggc taccgcctcg gcgccacgcc ccagttgcac ttcgtctacc
      241 tcatgcgcaa gcaggtccca gagcgtggat cgatctggcg cctgggcacc agccagaccc
      301 acacccgcgg ccaggtgaag ccggtggtcg gcttcctcca gcgggcccgg caggagcacg
      361 ccgacgagtt gtgggtggtc tccacccacg acagcgagca ggaggcccgc cttcaggaag
      421 cggtgtggtc gctgcaatat cagctcccca cactgccttt cgtgcctcgc aagggcggct
      481 ccatcaaggg gctggttcac gatgcggaag ccatccgccg cgtgttcgcg gccgtggatt
      541 cccaatccgg cgcggagcga ctgctggcgg atctgggcat ggcggtggag gcgccccatc
      601 accgggccca ggccagcgat ggcttgcgcc ggcaggtgac ggtcaccctt tgcggagacc
      661 ggcgtgggaa gcgccccatg caccgcatct ccatgaccgg ccgcagcgcg gaggatcgcc
      721 gcgtgcttga aggcctgggc ctgtccgtgc gccctgcgaa ggccggttca tcgagctggc
      781 gcatggaaac ctgtgccgcc tccttcaagg acatccggaa gatggctgac cgcatccgga
      841 agcacctgga tgcggagatc ctcctgcagg cccggctggg ggccagcccc gggcgcgaga
      901 ccagcagcct gcctttcctt ccagcctgca acctgaagcc gggcatggcc ctgttcgatg
      961 gggcgggcgg cctggatgtg gtggatcggg tggagagggt aacgctgaca gcggaagtcc
     1021 atgatctgga tatcgagggg gtccacaatt tcgtggccga cggtctcgtg acccacaact
     1081 ccatctacgg ctggcgtggc gccgacatcc gcaacatcct cgacttccag caggacttcc
     1141 ccgaggccgt gcgcatcgag ctgctgcaga actaccgctc caccaagaag atcctggacg
     1201 cggcctcgga ggtcatcgcc aacaactccc agcgggtgga gggcaagggc gccctcgtga
     1261 ccgacctggg cgagggcgag tccatcacct tcaagctggc ggatgagggg cggctggagg
     1321 cggagtgggt ggcgcagcgc atccaggagc tgcggtaccg ggagcccgag gccaagctgg
     1381 ccgtgctcta ccgcgccaac tggcagtccc ggcagatgga agaggccctg cgggcccaga
     1441 acatggccta ccgcctggtg ggcggcgtga agttctacga gcggcaggag gtgaaggacc
     1501 tcatctcgta cctgcggctc atctccaatc ccttcgacct ggtgagcttc cgccgctgcg
     1561 tgaacgcgcc cacccggggg gtgggaccca ccacgctggg gaagatcgag ggcgccatcc
     1621 ccgagggcgg cacgcccctg gagggcctgg ccctgctgct gcgctccggc gagctgaagg
     1681 gacgcgccca acgggagctg ggcaagttcc tcgacctctt ccgccgcgcg gcgggggagc
     1741 gggacgccca gggcctggcg ggcctggtga aatggacgct ccaggagagc ggctacctcc
     1801 agagcctgga ggacgaggcc accctggagg ccgagggccg catccgcaac ctggaggagt
     1861 tcctcagcgc tgcggcggaa agcgaatccc tgggcctgcg cctgtcggaa ttcctggacc
     1921 gcatcaccct ggcctcggat acggatcagc tggaggaggc ggcccacctc agcctcatga
     1981 ccatccactg cgccaagggt ctggagttcc ccttcgtgtt cgtcatcggc atggaggagg
     2041 acgtcttccc caaccgcaac gcgcgggaga cccccgaggg gctcgaagag gaacggcgcc
     2101 tcttctacgt ggccatcacc cgcgcccagc ggcggctcac gctgagcgcg gcccggcggc
     2161 ggcgcatcat gggcacggaa atgctgtcca tgcccagccg cttcctgcgg gagatccccg
     2221 cggaggccct caccgcaccc atccggtggg gcacggagat ctatcagtcc ggcgaaggcg
     2281 tgcggcccgg cagctccttc tcccgcgaag gcggcggcgg ggcttcggtg gccacggagc
     2341 tgcagcgcat ccggagcttc ttcgaccgcg tcaaggaggt tccgccaccg gtcccggatg
     2401 gcggcaggct ctccgagcct gccgaacaga aagatccgag tgccttcgag gcgggcacgc
     2461 gggtgaggag cgcccgcttc ggcgcgggca cggtgctggc cttctcgggc cgtggagacg
     2521 ggctgaccta caccatccgc ttcgaccagg gtggcgaccg gcgcatcatg gcgcgcttcg
     2581 ggggcctgga gcgggcgtga acctcgcggc cagcacacct cgaagcgcag ccaggccctg
     2641 gatggagatg aacacttcct ccttcacagc agatcctcca gggccgacgc ggccgtgggg
     2701 aagcggaact ggaagcccag ggcctgggcg cgggcgggga tcaccagggc cccctggagc
     2761 agcagggcct ccgccatctc ccccagcagc agcttggtgg cggcggtggt gaggaagccc
     2821 ggcacgggca gcaggggccg gtggagccgg cgggccagga ggcgggtgaa ggccccgttg
     2881 ctgagggggg ccggcgccgt ggcgttgaag ggaccctccc aggccggatt cagggcggcc
     2941 tccacgagca tggccaccag gtcatcgagg tggatccagc tgaacccctg ccgccccgtg
     3001 cccagcttgc agcccgcgta ggccttcacg ggcagcgcca tcttcggcag ggcgccgccc
     3061 tcccgggcca gcaccacgcc gatgcggagg cgggccaccc gcacgccaaa agccagggcc
     3121 gccatggcct cggcctccca cctctggcag acctccgcca ggaacccctg gccggggccg
     3181 gcctcctcgt ccacgatggc ctcgccctgg gggaggtagt agccgatggc cgaggcgttc
     3241 accagggccg cggggggcct ggcgcagatc cgcatggcct ccaccagccg ggccgtggtc
     3301 ccgagccggc tgtcctggat ggcggccttg cgggcggcgc tccagcgccg gtcggcgatg
     3361 ccttcgccgg ccaggttgat gaccacatcc gcgccttcca gcagggcccg gaggttctcc
     3421 cagccgtgcg cggcggcgcc agcgggaagt ctcagggtgc cgggattccg ggtcagcacc
     3481 gccacgtggg ccccccgatc cgtcagggcc tggaccaggg gacgccccac caggcctgtg
     3541 cccccggcca ccaccacccg gttcaggcct gatgtcccca tgggtgcctc cttgtccaaa
     3601 tataaatcag aacaaattga ttccgaagga ccttggtcat tgtcgagatt ttagatgcct
     3661 ccgggagggt acccttgacc cctggccttg ggtcccgtgg accccttccg ccgaggcgac
     3721 catgcgctac ctgctgtcca acctgccgtt gaacctgggg gaggaggcgc tggatctggc
     3781 caagcccctg gcccatgccc tgggcggcgc gccgaaggag taccgggccg tgaccctgga
     3841 acggcggagc ctggatgccc ggcacaaggg cgccatccgc ttcctcacgg ccctcagctt
     3901 cgactcggac cgcgccctgg agcttggccc ccatcccggc gggctcaagc tggacctggc
     3961 gccgcctgcg gcgccctacg cggtggcgca gccgccgcgc aaaccccggg tggtggtggt
     4021 gggcagcggc cccgccggga ccttctgcgc cctgcgcctg ctggactacg gcatcgagcc
     4081 cgtggtgctg gagcgcggcc ccgccatggg cgagcgcgtg aaggccatcg cgggcctgtg
     4141 gaaggatgcg gtgctggacc ccgaggccaa cgcccagttc ggcgagggcg gggcgggcac
     4201 cttcagcgac ggcaagctca ccacccgcat cggccatccg gccacccgct acgtgctgga
     4261 ggccttcgtg cgcttcggcg ccaacccccg gatcctgtac ctggccaagc cccatgtggg
     4321 cacggacgtc atccggcgct gcacggtgct catccggaag gaggccgagg cccggggcgc
     4381 ccggtaccgc ttcaaggcgc ggctggcgga cgtgcgcttc gatgatcagg gccgcgtgcg
     4441 ggccgcggtg ctggcggatg gcgaggagat cccctgcgag gccctggtgc tggcgccggg
     4501 ccacagcgcc cgggatacct tcgagatgct gcacggccac ggcgtggcca tgcgccagaa
     4561 gccctttgcc atgggcgtgc gggtggagca cccccaggac ctcatcgacc gctcccagta
     4621 cggccccagc gcgggccatc cctcgttgcc cgccgccgac tacaagctgg tctgcaactt
     4681 cggcctgaac cgggccgcct acagcttctg catgtgcccc ggcggcgagg tcatccagtg
     4741 cagcagcgag gagggcggcg tggtggtgaa cggcatgagc aacgagaagc gcgattcggg
     4801 cttcgccaac tcggggctgg tggccaaggt gaacacggcg gatttcggca gcgaccacct
     4861 gctggggggc atgtacttcc agcgcaagtg ggagcaggcg gccttccgcg ccgcggggga
     4921 gacctacggc gccccggcca tggccgtgca ggacttcctc aagggccggg ccacgggccg
     4981 cctgccgcgc accagcttcc ggcccttcgc cgtggcggcg gacctgcgga cctgcctgcc
     5041 ggacttcgtg cgggagcagc tggcgggggc gctccctgcc ttcgacagga agattcacgg
     5101 cttcgccagc agccaggcca tcctgcttgc catcgaaagc cgcaccagca gtcccatcca
     5161 gctgctgcgg ggc
//
LOCUS       DASUDT010000290         2056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1162910, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000290 DASUDT010000000
VERSION     DASUDT010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162910"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1628)
                     /locus_tag="VFV26_05925"
     CDS             complement(<1..1628)
                     /locus_tag="VFV26_05925"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEX4845738.1"
                     /translation="MPYLSWLEGTQPFRHAVVEDPCVLGRDPVACAVAQPALGTLSRT
                     HAAITRNGDGWWVRDLDSANGTTLNGLPLNHPHGSALRDGDELALGGWHLSFTEGFPG
                     LDGVTFAERVGDLFQEVRPEPAQAMVFIRGVELLYHSTEKLLRHVDSDTQVRSLLDES
                     LHLLGGDRGFLVMRQREGSWRTVHRVGEVQEGIGLSRSVLDYVERERTAVLSNRPLAD
                     PRFGGMSLVELHRGSLMCAPMIDESGVQGALYLDRESEGRPFTRFDLAIFQAFVRQGS
                     LALRQATLQRRALGQAEQQGELLRLRNEWQRETDRHGELLAAAAVPFRRIQSWAEEFP
                     GAAGEAIRSQMELLSALLEQGLLEGHPEQAQATGHPLLIATLQEDLAKRWESLLALRR
                     AWLRLGESPQGSVWWPGGPVLPALAGLIEPMLMQLTSGMEVAARWDQERGFHILRLSL
                     PQGLHAPIPDAWTQRVLQDAGIRWRWVDQALDVFLPEGPDAMPEEPSRPLLGLVSEEL
                     GLLGLFQTVAEAGDLLLQPLEIQPPPPPLPKYRFL"
     gene            complement(1676..1975)
                     /locus_tag="VFV26_05930"
     CDS             complement(1676..1975)
                     /locus_tag="VFV26_05930"
                     /inference="COORDINATES: protein motif:HMM:NF014087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbY family RNA-binding protein"
                     /protein_id="HEX4845739.1"
                     /translation="MLTSKQRQFLKAQAHKLKPVMHVGKGGVTPAQAAELDVMVDSLE
                     LVKVKINPNSFEDEDTAAKALCASVPGLEHVWTIGHTMLFFRPSRTRDTRYSLPS"
BASE COUNT          335 a          713 c          697 g          311 t
ORIGIN      
        1 aggaaccggt acttgggcag cggcggcggc ggcggctgga tttccagggg ctgaagcagc
       61 agatccccgg cctcggccac ggtctggaag aggcccagca ggcccagttc ctcgctgacc
      121 agccccagca ggggccggct cggctcttcg ggcatggcat cggggccttc gggcaggaac
      181 acgtcgaggg cctggtccac ccaccgccac cggatccccg catcctgcag cacccgctgc
      241 gtccaggcat cgggaatcgg ggcatgcagt ccctggggca ggctcaggcg gaggatgtgg
      301 aagccccgct cctggtccca ccgggcggcc acctccatgc ccgaggtcag ctgcatgagc
      361 atgggttcga tcaggcccgc cagcgccgga agcaccggcc ccccgggcca ccacaccgac
      421 ccctggggag actctcccag gcggagccag gcccggcgca acgccagcag gctctcccag
      481 cgcttggcca gatcctcctg gagggtggcg atgagcaggg ggtgcccggt ggcctgggcc
      541 tgctccggat ggccctccag cagtccttgt tccagcagag ccgacagcaa ctccatctgg
      601 gaccggatgg cttcgcccgc ggcgccggga aactcctcgg cccagctctg gatgcgccgg
      661 aagggcacgg ccgcggcggc aaggagttcg ccgtgccggt cggtctcccg ctgccactca
      721 ttgcgcaggc gcagcagttc gccctgctgc tccgcctggc cgagggcccg gcgctggagc
      781 gtggcctggc gcaaagccag ggatccctgg cgcacgaagg cctggaagat ggccaggtcg
      841 aagcgggtga aaggccttcc ctccgattcg cggtccaggt acagggcgcc ctggacgccg
      901 ctttcatcga tcatcggggc gcacatgagc gagcctcggt ggagttccac caggctcatg
      961 ccgccgaacc tggggtccgc caggggccgg ttggaaagga ccgccgtgcg ctcccgctcc
     1021 acatagtcga gcacggaccg ggaaagcccg atgccctcct gcacttcccc cacccgatgg
     1081 accgtgcgcc agctgccctc cctctggcgc atcaccagga agccccggtc cccgcccagc
     1141 aggtgcaggg attcgtccag gaggcttctc acctgcgtat ccgaatccac gtgccgcaga
     1201 agcttttccg tggagtggta gagcagttcc acgccacgga tgaacaccat ggcctgggcc
     1261 ggctcgggcc ggacctcctg gaaaaggtcc cccacccgct cggcaaaggt gacgccatcc
     1321 aggcccggaa agccctccgt gaaggacagg tgccagccgc ccagagccag ctcgtccccg
     1381 tcccgcaggg cgctgccgtg gggatggttc agggggagcc cgttcagggt ggtgccgttg
     1441 gcggaatcca ggtccctgac ccaccagccg tccccgttcc gggtgatcgc ggcatgggtc
     1501 cgggacaggg tgcccagggc cggctgcgcc acggcacagg ccacgggatc acggcccagc
     1561 acgcagggat cctccaccac cgcatgccgg aacggctgcg tcccctccag ccaggacagg
     1621 tagggcatcg aacctccacc ctcacctatt cgggaggtgc ggccccagcc ctgaattagg
     1681 acggcaacga gtaccgcgtg tcgcgggtgc ggctgggccg gaagaagagc atggtgtggc
     1741 cgatggtcca gacatgctcc aggccgggca ccgaggcgca cagggccttc gcggcggtgt
     1801 cctcgtcctc gaagctgttg ggattgatct tgaccttcac aagttcaagg ctgtccacca
     1861 tcacgtcgag ttccgcggcc tgggcggggg tgacacctcc cttgcccacg tgcatgacgg
     1921 gcttgagctt gtgggcctgg gccttgagga actggcgctg tttcgaggtg agcatcggat
     1981 ctccagatga tcagtttatc gtgcaaacac cctggtagcc catggttgga ggccctgatg
     2041 gaaaaagggt tcctga
//
LOCUS       DASUDT010000291         4156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2112686, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000291 DASUDT010000000
VERSION     DASUDT010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2112686"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1209
                     /locus_tag="VFV26_05935"
     CDS             <1..1209
                     /locus_tag="VFV26_05935"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEX4845740.1"
                     /translation="AALAKEEVPDAVVKAYSGQKFTFGPEYIIPKPFDPRVLLWVAPA
                     VAKAAMDTGVAKQPITDMQAYKERLEGLQGRSKDVIRSVVHRAKANPKRVVFPEGDHP
                     LILQAVSQMVDEGICVPILVGNPAKVKAVAADHGIDLGDIEILDPASVAWRQEAEDAF
                     LELRKRRGVTRDEAGRKMQERIYFGAMMCRMGKADGLIAGLTMYYPDTIRPCLEVIGT
                     RKGVKRVCGVYTMVLKNRVLFFADTTMNIEPNSEELAEIALLTADLAKDTFNMEPQVA
                     MLSFSDFGSVEHPLVRKVQKAVEIVKAQRPGLKCDGEMQADTALGADILTENYPWVDL
                     PGGPNVLIFPDLTSGNIGYKLVQRLAGAEVIGPITCGMAAPVHVLQRHSDLNDIIHLT
                     ALTVVEAQQK"
     gene            complement(1258..2049)
                     /locus_tag="VFV26_05940"
     CDS             complement(1258..2049)
                     /locus_tag="VFV26_05940"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX4845741.1"
                     /translation="MSLFEYLRRDPECRNLAEGAIHAVAPALEDPDPAATLAQLDDWA
                     FTLAGRMPLPWNTHQAIDALNHLLFGELGFEGDRETYDDPLNALLPSVMARRKGLPIA
                     LSILWVDLARRLGFDAVGVGLPGHFLAALRTDFGLLCFDPFHQGRPVGEEGGAQLVKA
                     ASAGRIEFHRDMLRPAADRQVLVRLVRNLHLRFVQAEDWEEALWTGTHLILLDPGSSR
                     AHKERAFVHLQRGEPGPALADLREALRLSPGPDSEIQAWMQQLET"
     gene            complement(2049..2543)
                     /locus_tag="VFV26_05945"
     CDS             complement(2049..2543)
                     /locus_tag="VFV26_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845742.1"
                     /translation="MTRPALRWTIPALLTLQLAMLWLQGAQLHRQNQALQGLREDIQA
                     LTDSLDAHSQDPGGPEEEGAAVPASFLPRPVPQKKIAVLGVQEEQEAASKEMQASRES
                     AQKAVKDAREVQSKLSFEENARKADEAKKVQAATSIWQRWVYGALALVALAFVARAVI
                     QRRG"
     gene            complement(2540..>4156)
                     /locus_tag="VFV26_05950"
     CDS             complement(2540..>4156)
                     /locus_tag="VFV26_05950"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEX4845743.1"
                     /translation="LLAWSLLQAKYGNSLIFRRQVFIFMLPAPLLPLSFAYAIFRHGL
                     FDVRKALLRWVSYMAILALTVAGYLGGLAWAFSHLSSIPPGWAGALIGLLALPLGWAL
                     RRVLQGIRKRFRRDFSSTRDIVLSAVREPRKRFSEEALLKSLRRALGEAFQPQLLEVL
                     PIEARQIILPPAETTDRDDRRVHFPPQPLHLPPGLLRLARENRELVLGLGSEEADWIR
                     EQGEGLRAHVDALEAQLLLLILAGDHAHSAVLLGGKYAELNYGREDRELLREVALAAG
                     QVLETAVMHQRLLAQERLSQELDTARRIQEGLITSHLPPIPGFQVALRLEPALETGGD
                     LLFVKRRPSGTWLAAVGDICGKGLAAALYMAQATALLEQATQQEDQGLEEMLRSMDHT
                     LRQLLGQRGFLTLVLLEWDDQGNYRLARAGHPGALMLQGVSEDCSTEMVPHGRGLGLR
                     PAGPGDWEVVEGVLPPRGWMVLYSDGLSEAMNREGELYGTDRLCSQLRRLWGTGSPRA
                     ACEAVFQDVAAFDTQNRDDRTLFILGREHP"
BASE COUNT          649 a         1426 c         1487 g          594 t
ORIGIN      
        1 gccgccctgg ccaaggaaga ggttcccgac gccgtggtga aggcctactc gggccagaag
       61 ttcaccttcg gccccgaata catcatcccc aagcccttcg atccccgcgt gctgctgtgg
      121 gtggctcccg ccgtggccaa ggccgccatg gatacgggcg tggccaagca gcccatcacc
      181 gacatgcagg cctacaagga gcgcctcgag ggcctccagg gccgcagcaa ggacgtgatc
      241 cgcagcgtgg tccaccgcgc caaggccaat cccaagcgcg tggtcttccc cgagggcgac
      301 catccgctga tcctccaggc tgtctcccag atggtggatg agggcatctg cgtgcccatc
      361 ctcgtgggca accccgccaa ggtgaaggcc gtggccgcgg accacggcat cgacctgggc
      421 gacatcgaga tcctggaccc ggccagcgtg gcctggcgcc aggaggccga ggacgccttc
      481 ctggaactgc ggaagcgccg gggcgtcacc cgcgatgaag cgggccgcaa gatgcaggag
      541 cggatctact tcggcgcgat gatgtgccgc atgggcaagg ccgacggact catcgcgggc
      601 ctgacgatgt actaccccga caccatccgt ccctgcctgg aagtcatcgg cacccgcaag
      661 ggcgtcaagc gcgtgtgcgg cgtctacacc atggtgctga agaaccgcgt gctgttcttc
      721 gccgacacca ccatgaacat cgagcccaac agtgaggagc tggcggagat cgccctgctc
      781 acggcggacc tggccaagga caccttcaac atggaacccc aggtggccat gctgtccttt
      841 tccgacttcg gcagcgtgga gcaccccctg gtccgcaagg tccagaaggc cgtggagatc
      901 gtcaaggcgc agcgccccgg cctcaagtgc gatggcgaga tgcaggccga caccgcgctg
      961 ggcgccgaca tcctcacgga gaactacccc tgggtggacc tgccgggcgg ccccaacgtg
     1021 ctgatcttcc ccgacctcac cagcggcaac atcggctaca agctggtgca gcggctggcg
     1081 ggcgccgagg tcatcggccc catcacctgc ggcatggcgg ctcctgtgca tgtgctccag
     1141 cggcacagcg acctgaacga catcatccac ctcacggcgc tcaccgtcgt ggaggcgcag
     1201 cagaagtagg attcaatctc cacctttcca ataagcgggg gccttcgggc ccccgcttca
     1261 tgtttccagc tgctgcatcc aggcctggat ctcggagtcc ggaccggggc tgaggcgcag
     1321 ggcttcgcgc aggtccgcga gggccgggcc gggttcgccg cgctggaggt ggacgaaggc
     1381 gcgttccttg tgggcccgcg aactgccggg atccagcagg atgaggtggg tgcccgtcca
     1441 cagggcctcc tcccagtcct cggcctgcac gaagcgcagg tggaggttgc gcacgaggcg
     1501 cacgaggacc tggcggtccg cggcgggccg cagcatgtcc cggtggaatt cgatgcgtcc
     1561 ggcgctggcg gccttcacca gctgggctcc gccttcctcc cccacggggc ggccctgatg
     1621 gaagggatcg aagcagagca ggccgaagtc ggtgcgcagc gcggcgagga agtgccccgg
     1681 caggcccacg cccacggcat cgaaacccag gcgccgggcc aggtccaccc acaggatgga
     1741 cagggcgatg ggcaggccct tccgccgcgc catcaccgaa ggcagcaggg cgttcagcgg
     1801 atcgtcgtag gtctcccggt cgccttcgaa gccgagctcc ccaaagagca ggtgattgag
     1861 ggcgtcgatg gcctgatggg tgttccaggg caggggcatg cggcccgcca gggtgaaggc
     1921 ccagtcgtcc agctgggcga gggtcgccgc cggatcggga tcctccaggg cgggcgccac
     1981 ggcatggatg gcgccttcgg ccaggttccg gcactccggg tccctgcgga ggtattcgaa
     2041 gagggacatc agccccgccg ctggatcacc gcgcgggcca caaaggcgag ggccacgagc
     2101 gcgagggcgc cgtagaccca gcgctgccag atgctggtgg ccgcctggac cttcttggcc
     2161 tcgtcggcct tgcgggcgtt ctcctcgaac gaaagcttgg actggacctc ccgggcgtcc
     2221 ttcacggcct tctgcgcgga ctcgcgggag gcctgcatct ccttggacgc ggcctcctgc
     2281 tcctcctgca cgcccagcac ggcaatcttc ttctggggca ccggccgggg caggaaggac
     2341 gcgggcacgg cggcgccctc ctcctccggg ccgcccgggt cctggctgtg ggcatccagg
     2401 gaatccgtga gggcctggat atcctcgcgc aggccctgga gcgcctggtt ctggcggtgg
     2461 agttgcgctc cctgcaacca gagcatggcc agctggagcg tcagcagggc ggggatggtc
     2521 catcggaggg cggggcgggt catgggtgct cccttcccag gataaacagg gtccggtcat
     2581 cccggttctg ggtatcgaag gcggccacgt cctggaagac cgcttcgcag gcggcccggg
     2641 ggctgccggt gccccagagg cggcggagct ggctgcacag ccggtcggtg ccgtagagct
     2701 cgccctcccg gttcatggcc tcggacaggc cgtcgctgta gagcaccatc cagcccctgg
     2761 ggggaagcac gccctcgacc acctcccagt cgccgggtcc cgccgggcgc aggcccaggc
     2821 cccggccatg gggcaccatc tcggtggagc agtcttcgga taccccctgg agcatcaggg
     2881 cgccggggtg cccggcgcgg gccaggcggt agttcccctg gtcgtcccat tccagcagca
     2941 ccagggtgag gaagccccgc tggcccagca gctggcgcag ggtgtggtcc atggagcgca
     3001 gcatctcctc cagtccctgg tcttcctgct gggtggcctg ttccagcagc gccgtggcct
     3061 gggccatgta cagggccgca gccagcccct tgccgcatat gtcacccacc gccgccagcc
     3121 aggtgccgct ggggcggcgc ttgacgaaga ggaggtcgcc gccggtctcc agggcgggtt
     3181 ccaggcgcag ggccacctgg aagcccggga tgggcggcag gtgcgaggtg atgagcccct
     3241 cctggatgcg gcgggcggtg tccagctcct ggctcaggcg ctcctgggcc agcaggcgct
     3301 ggtgcatcac ggccgtctcc agcacctgtc cggcggccag ggccacctcc cgcagcagct
     3361 cccggtcctc gcggccgtag ttcagctcgg cgtacttgcc gcccagcagc acggcgctgt
     3421 gggcatggtc ccccgcgagg atcagcagga gcagctgggc ctccagggcg tccacatggg
     3481 cgcggaggcc ctcgccctgc tcgcggatcc agtccgcctc ctcgctgccc aggcccagca
     3541 ccagctcgcg gttctcgcgg gccaggcgca gcaggcccgg cggcaggtgg agcggctggg
     3601 gcgggaagtg cacccggcgg tcgtcccggt ccgtggtttc cgccgggggc aggatgatct
     3661 ggcgggcctc gatgggcagg acctccagga gctggggctg gaaggcctcg cccagggcgc
     3721 ggcgcaggga cttcagcagg gcctcttcgc tgaagcgctt gcggggctcg cgcacggcgc
     3781 tgaggacgat gtcccgggtg ctggagaaat cccgccggaa gcgcttccgg atgccctgca
     3841 gcacgcggcg cagcgcccag cccaggggca gggccagcag gccgatgagg gccccggccc
     3901 agcccggggg aatggacgac aggtgggaga aggcccaggc caggccgccc aggtagcccg
     3961 ccacggtgag ggccaggatg gccatgtagc tcacccagcg gagcagcgcc ttccgcacgt
     4021 cgaagaggcc gtggcggaag atggcgtagg cgaagctgag gggcagcagg ggcgcaggca
     4081 gcatgaagat gaagacctgc cgccggaaga tgagactgtt cccgtacttg gcctggagca
     4141 gggaccaggc cagcag
//
LOCUS       DASUDT010000292         2641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2090503, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000292 DASUDT010000000
VERSION     DASUDT010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090503"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VFV26_05955"
     CDS             complement(<1..784)
                     /locus_tag="VFV26_05955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX4845744.1"
                     /translation="MPLGGSPWSDREGRARLVAMARWTLLAVIGLYGVFAGGVFSVSA
                     YGFFPAPAQLAFLAGSAVAVAASGLILQRGWLRAKAFRYSDHVQVLLDLFFITVLIHF
                     SGGPSSWFWPAYMIATMEAAFLLPRRRDVWIMGAAGGAMHGLMLAGHYFRVLPPVAMP
                     FALESLSANPLYLGLAWSWAAILNAAVAFITAHLMAVIRWEHRALKAREAQLQQFVDT
                     ANDLIFCLTPEGRFLYANPLWTRTMGYGLGDLETTTFFDLIDL"
     gene            1095..>2641
                     /locus_tag="VFV26_05960"
     CDS             1095..>2641
                     /locus_tag="VFV26_05960"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX4845745.1"
                     /translation="MPMPPAVPPASYYLIQGADLWTAQGPQSGHALAIQKGKIVAVGP
                     LDTLAKAHPKAQRIDLPGGTLLPGLIEGHAHVAGLGALSRKVDLTGLADLRSAQERIR
                     TWSTAHPQGWLLGRGWDQNRWPDKQFPKATDLDALTGSRPAFLQRVDGHAAWVNSAAL
                     AMAGIGPKTPDPEGGRILRDAAGRPTGILLDAAVDLVGKLIPEPSAAELEARLKAGLT
                     ALRANGFTAVADMGVGARELAAYRRMAAAGTLPIRVFAYLNHDHRLMLRELKQGRARN
                     LSFFQVQGVKFYLDGALGSRGARLLAPYADEPSTQGLWVTDPIKVGMDASITLRAGYQ
                     PAIHAIGDAANRAALDLLAKALKKGRGPLPPRIEHAQIVTAEDAARFGKLGVVASVQP
                     VHCTSDHSWTPARLGPERVDEAFPWRSFASGGALLAFGSDAPVEDPNPYISIAAAETR
                     QDPAGNPPGGFLPAQRLTRLEALRAYTAGNAEALGRAKDLGALQKGAVADLLWVQAPL
                     GNISPEAL"
BASE COUNT          445 a          987 c          846 g          363 t
ORIGIN      
        1 ccaggtcgat gaggtcgaag aaggtggtgg tctccaggtc ccccagaccg tagcccatgg
       61 ttctcgtcca gagcgggttc gcataaagga acctgccctc gggcgtgagg cagaagatca
      121 ggtcgttcgc ggtgtccacg aactgctgca gctgagcctc ccgggccttc agggcccggt
      181 gctcccaccg gatgaccgcc atcaggtggg ccgtgatgaa ggccacggcg gcgttcagga
      241 tcgcggccca ggaccaggcg aggcccaggt agagcggatt ggcgctcagc gattccaggg
      301 caaagggcat ggccaccggc ggcagcaccc ggaagtagtg ccccgcgagc atgaggccat
      361 gcatggcccc gccggcggca cccatgatcc agacgtcccg gcgccggggg aggaggaagg
      421 ccgcctccat ggtggcgatc atgtaggcgg gccagaacca gctggagggt cccccactga
      481 agtggatcag gaccgtgatg aagaagaggt ccagcaggac ctggacgtgg tccgagtatc
      541 ggaaggcctt cgcgcggagc cagcccctct ggaggatcag gcccgaggcc gccacggcaa
      601 ccgccgagcc cgccaagaag gccagttggg ccggagcggg gaagaacccg taggcactga
      661 cggagaagac gcccccggcg aacaccccgt agaggccgat gacggccagc agggtccacc
      721 gggccatggc gaccaggcgg gcccggccct cccggtcgct ccaggggctc cccccaaggg
      781 gcacccgtcc aacgctcagg attgcgcccg attcagtctc cagccagtcg gcgctttcgg
      841 tccagggggg cacagggatc tcctaattta ctacccaatg gtcaactgtc gcggatcccc
      901 agcagtgcgt cagtgatcgg cgtcacccaa ttccagagac aagatcatgt aatacaaata
      961 tttatataaa aattattgcg tttttctacc attcgacctt tagaatggcc tcccataccc
     1021 accccgatcc tcccggtctc ttccggcgtt catcttttgc gaagctatgc ttccagaaca
     1081 cccaggacac acccatgccg atgccccccg ccgtcccgcc cgcctcctac tacctgatcc
     1141 agggtgccga cctctggacc gcccaggggc cccagtccgg ccacgccctg gccatccaga
     1201 aggggaagat cgtcgccgta ggccccctcg ataccctggc gaaggcccac cccaaagccc
     1261 agcgcatcga cctgcccggc ggcacgctgc tgcccggcct catcgaaggc cacgcccacg
     1321 tggccggcct gggcgccctc agccgcaagg tggacctcac cggcctggcg gacctccgca
     1381 gcgcccagga gcgcatccgg acctggtcca ccgcccatcc gcagggctgg ctgctgggcc
     1441 gcgggtggga ccagaaccgc tggcccgaca agcagttccc gaaggccacc gacctggatg
     1501 ccctcacggg ctcccggccc gccttcctcc agcgcgtgga tggccatgcg gcctgggtga
     1561 acagcgccgc cctggccatg gcgggcatcg gccccaagac cccggatccc gaaggagggc
     1621 gcatcctccg ggacgcggcg ggacggccca cgggcatcct gctggatgcg gccgtggacc
     1681 tggtcgggaa gctcattccc gagcccagcg ccgccgaact ggaagcgcgg ctgaaggctg
     1741 gcctcacggc cctgcgggcg aacgggttca ccgccgtggc ggacatgggc gtgggcgccc
     1801 gcgagctggc ggcctaccgc cgcatggccg ccgcgggcac cttgcccatc cgcgtcttcg
     1861 cctacctcaa ccacgaccac cggctcatgc tccgggaact gaagcagggc cgggccagga
     1921 acctgtcctt cttccaggtg cagggcgtga agttctacct ggacggcgcc ctgggaagcc
     1981 gcggcgcccg cctgctcgcc ccctatgccg atgagccttc cacccagggc ctctgggtca
     2041 cggatcccat caaggtcggc atggacgcct ccatcaccct gcgggctggc taccagcccg
     2101 ccatccatgc catcggcgat gccgccaacc gcgccgccct cgacctgctg gccaaggccc
     2161 tgaagaaggg ccgggggccc ctgccccccc gcatcgaaca cgcccagatc gtcaccgccg
     2221 aggatgccgc ccgcttcggg aagctcggcg tggtcgccag cgtccagccc gtgcactgca
     2281 cctcggacca cagctggacg cccgcgcggc tgggccccga gcgtgtggat gaggccttcc
     2341 cctggcgcag cttcgccagc ggtggcgccc tgctggcctt cggcagcgac gcccccgtgg
     2401 aggatcccaa tccctacatt tccatcgccg ccgccgaaac gcgccaggat ccggcgggca
     2461 acccgcccgg cggcttcctg cccgcccagc ggctcacccg gctggaggcc ctccgcgcct
     2521 acaccgccgg caacgccgag gccctgggcc gcgccaagga cctgggcgcc ctccagaaag
     2581 gcgccgtggc cgacctgctg tgggtgcagg cccccctggg gaacatcagc cccgaggccc
     2641 t
//
LOCUS       DASUDT010000293         5849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1229205, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000293 DASUDT010000000
VERSION     DASUDT010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5849
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229205"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VFV26_05965"
     CDS             <1..551
                     /locus_tag="VFV26_05965"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEX4845746.1"
                     /translation="SFTYNLVQAFETLGAPVQVVRHDAITLDGAKALRPEAVVLSPGP
                     GHPTESPAHMALAGSAWDIPLLGVCLGHQALAAASGGQVIRALEPLHGEATALEHDGT
                     GLFLDLPQGLPIGRYHSLIADPATLPACWRVTGRSPGGEIMAMAHRQLPRWGVQFHPE
                     SILTPDGPAMLANFLRLAKASR"
     gene            548..1582
                     /gene="trpD"
                     /locus_tag="VFV26_05970"
     CDS             548..1582
                     /gene="trpD"
                     /locus_tag="VFV26_05970"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEX4845747.1"
                     /translation="MTLLTTHNPIRPLPEATASELMRIFIDQDTDALLVGACLALLAQ
                     RVPEAHELAAFADALSEVAVPFPAVPAGALDTCGTGGDGASTANLSTLAALLLAHLGV
                     PIVKHGNRAATSVCGSADLLEALGYDLARASADLARDLERHGFAFLFAPAYHPLLGRL
                     REIRRRLGIPTIFNLLGPLLNPANPPLQLLGVAREDLLAPMAGALARRPTLRRAFVIH
                     GKDAEGKGLDEASIEGPTTVLTVGEGRVQGAQVLVPRELGIAQPPLHALRVKDRAEAL
                     GVARGLFGGATHPDFRPAVADAVALQAALGLALHRGGSLEEVAPAFREARASLNQGFP
                     LPFSVSGVKP"
     gene            1579..2415
                     /locus_tag="VFV26_05975"
     CDS             1579..2415
                     /locus_tag="VFV26_05975"
                     /inference="COORDINATES: protein motif:HMM:NF012444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol-phosphate synthase"
                     /protein_id="HEX4845748.1"
                     /translation="MNRLPDPAILVRATGLSASSHLQRVLVSELGRLASAAPAPTRSR
                     APLDGPGPFEAALRADAEARGGAVIAEYKQASPSLGPFAAGTPLETQLRAYRDGGAAA
                     FSILAEPAYFRGTAAHLTAAAGFGLPRLYKGFVIAEAQLAEAESCGAEAVLLIARVLK
                     GHTAAFAEAARQRGLEPLVELHDLTEVPFAQAAQARLVGINARDLSTFTLGEPTAAPL
                     RRAFPGAVLIRESGLATPEDARAALAAGFQAVLIGEALMRSPDPKGFLERVFADLRQE
                     AP"
     gene            2412..3047
                     /locus_tag="VFV26_05980"
     CDS             2412..3047
                     /locus_tag="VFV26_05980"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845749.1"
                     /translation="MSLMAKVCGLTSVADAAFAAGQGADLLGFVVHPPSPRHCHDLAV
                     ARDFPDRAVLVMVADRAEAILAVAEAHGFRRVQPHLPAAERARGAALLRRAGRFVLLP
                     WADEAAQEGLPADLYLWEPSPAATGVAGGSGQGHPMAFPPPGPFLLAGGLGGDNLAAR
                     VAMLPSAARAQLRGFDAASRLEAAPGIKDPAKVAAFVAAVKQDIQEGRSHD"
     gene            3040..4224
                     /gene="trpB"
                     /locus_tag="VFV26_05985"
     CDS             3040..4224
                     /gene="trpB"
                     /locus_tag="VFV26_05985"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX4845750.1"
                     /translation="MTDAFALPTRFGTQELGGCYAPETLMQPLLDLESAFRAASVDPA
                     FLAELKAELRHFVGRPTPLTPAPRLAAKLGLRSLFLKREDLTHTGAHKINNALAQALL
                     ARRMGKAEVIAETGAGQHGVATAAACARLGLACTVYMGVTDMARQAPNVARMRLFGAR
                     VEPVAAGQGTLKEAVNEALRAWAGRCDKAHYILGSALGPHPFPTMVRSFQTVIGEEAR
                     AQVLEQSGALPEVVLACAGGGSNGLGLLVPFLGDGLRRVAVEAGGHGPALGEHAARLD
                     GGLMGVLHGCRTLLLQDAHGHTAETASISAGLDYPALGPELAALALDGQVEVRRASDD
                     EALAGARLLCETEGILPALESSHALALLPALAAEGAGTVLLGLSGRGDKDLSTYQSRL
                     GI"
     gene            4226..4978
                     /gene="trpA"
                     /locus_tag="VFV26_05990"
     CDS             4226..4978
                     /gene="trpA"
                     /locus_tag="VFV26_05990"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX4845751.1"
                     /translation="MSLNPLLPFIMAGDPALEALPALLSEAKALGIKALEVGLPHSDP
                     IADGPVLQAAAHRAIARGATPLRVLESLAGLTDSPDLILFTYLNPLLQIGAPKLKALL
                     AATPVKALLVVDLPFGEEPGFEAALRAAGYPMVPLLAPTTTLERARQVLAQRPDPGPS
                     ACFAQRFAYVVARLGVTGTGQGTDLDPVRERVAGLKALTDRPLAVGFGLSDLAGLTAV
                     RALGATPVVGSALVQALAEGKTLSEVLAPGLC"
     gene            5131..>5849
                     /locus_tag="VFV26_05995"
     CDS             5131..>5849
                     /locus_tag="VFV26_05995"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HEX4845752.1"
                     /translation="MTHRSRLTLTALTLIAAGAFAPMAQASGFQLREQSPLAQGNAFA
                     GVSAGSGDISALFFNPAVMTQYSGTQFSFGGTYIGISAKFSEGSASRTPALTALGFNV
                     APVTLAPLSPISGSATHGNAGVPAVLPEFNIMYSASENLKFGLSLNVPFGLTTEYDGN
                     WVGRYHGLKSELKTIDITPSVAYRVNKQFSFGAAFIIRKADAELTNGVDYGTALALKV
                     GSALAAAGMSTTAPGPGQNSPV"
BASE COUNT          768 a         2264 c         1996 g          821 t
ORIGIN      
        1 attccttcac ctacaacctc gtgcaggcct tcgaaacgct gggcgcgccg gtgcaggtgg
       61 tccgccacga cgccatcacc ctcgacgggg ccaaggccct gcggcccgag gccgtggtgc
      121 tgtcgccggg ccccggccac cccacggaaa gccccgccca catggccctg gcggggtccg
      181 cctgggacat cccgctgctg ggtgtctgcc tgggccacca ggccctggcc gcggcctcag
      241 gcggccaggt catccgggcc ctggaacccc tgcacggcga ggccacggcc ctggaacacg
      301 acggcaccgg cctcttcctg gatctgcccc agggcctgcc catcgggcgc taccacagcc
      361 tcatcgcgga cccggccacg ctgcccgcct gctggcgcgt cacgggccgc agccccggcg
      421 gcgagatcat ggccatggcc caccgccagc tgccgcgctg gggcgtgcag ttccaccccg
      481 aaagcatcct cacgccggac ggtccggcca tgctcgcgaa cttcctccga ttggcgaagg
      541 cttcccgatg accctgctca ccacccacaa ccccatccgc cccctgccgg aggccacggc
      601 ctcggagctc atgcgcatct tcatcgacca ggacacggac gccctgctgg tgggcgcctg
      661 cctggccctg ctggcccagc gggtgcccga ggcccacgag ctggcggcct tcgcggacgc
      721 gctgtcggag gtggccgtgc ccttcccggc ggtgcccgca ggcgccctgg acacctgcgg
      781 caccggcggc gatggggcct ccacggccaa cctcagcacc ctcgcggccc tgctgctggc
      841 ccacctcggc gtgcccatcg tcaagcacgg caaccgggcc gccaccagcg tctgcggcag
      901 cgccgacctg ctggaggccc tgggctacga cctggcccgg gccagcgcgg acctggcccg
      961 ggatctggag cgccacggct tcgccttcct cttcgccccg gcctaccacc cgctgctggg
     1021 ccgcctgcgg gagatccgcc ggcgcctggg catccccacc atcttcaacc tgctggggcc
     1081 cctgctgaat ccggcgaacc cgcccctgca gctgctgggc gtggcccggg aggacctgct
     1141 ggcgcccatg gccggggccc tggcccggcg gccgaccctg cgccgcgcct tcgtcatcca
     1201 cggcaaggac gcggaaggga agggcctcga cgaagcctcc atcgaagggc ccaccacggt
     1261 actgaccgtg ggcgaaggcc gcgtccaggg cgcccaggtg ctggtcccca gggaactggg
     1321 catcgcccag ccgcccctcc acgccctgcg cgtgaaggac cgcgccgagg ccctgggcgt
     1381 ggcccggggg ctgttcggcg gcgccacgca cccggatttc cgtcccgccg tggcggatgc
     1441 cgtggccctc caggcggccc tggggctggc cctgcaccgg ggcggttccc tggaggaggt
     1501 ggcaccggcc ttccgggagg cccgggcctc gctcaaccag gggttcccgc tgcccttctc
     1561 cgtctcgggg gtgaagccat gaaccggctc ccggatcccg ccatcctggt gcgtgccacc
     1621 gggctgtccg cgagctccca cctccagcgc gtgctggtgt cggaactcgg ccgcctggcc
     1681 tccgcagctc cggctccgac ccggagccgt gcccccctgg acggccccgg tcccttcgag
     1741 gcggccctgc gggcggatgc cgaagcccgc ggcggcgccg tcatcgcgga gtacaagcag
     1801 gcctcgccgt ccctgggccc cttcgccgcg ggcacgcccc tggaaaccca gctccgagcc
     1861 taccgggacg gcggcgcggc ggccttctcc atcctggcgg agcccgccta cttccggggg
     1921 acggcggccc atctgacggc ggcggcggga ttcggcctgc cgcggctcta caagggtttc
     1981 gtcatcgccg aggcccagct ggcggaagcc gaaagctgcg gcgccgaagc cgtgctcctc
     2041 atcgcccggg tgctgaaggg ccatacggcc gccttcgcgg aagcggcgcg gcagcggggc
     2101 ctggaacccc tggtggaact gcacgacctc acggaagtcc ccttcgccca ggcggcccag
     2161 gcccgcctgg tgggcatcaa cgcccgggat ctctccacct tcaccctggg cgaacccacc
     2221 gcggcgcccc tgcgccgggc cttccccggg gcggtgctca tccgcgaatc cggcctcgcc
     2281 acccccgagg atgcccgggc ggccctggcg gcgggcttcc aggccgtgct catcggcgag
     2341 gcgctgatgc ggagcccgga ccccaagggg ttcctcgagc gtgtcttcgc ggacctccgc
     2401 caggaggcgc catgagcctg atggccaagg tctgcggcct cacctccgtg gccgatgcgg
     2461 ccttcgccgc cgggcagggg gcggacctgc tgggcttcgt ggtccatccg cccagtcccc
     2521 gccactgcca cgacctcgcg gtggcccggg acttcccgga ccgggccgtg ctggtgatgg
     2581 tggcggaccg cgccgaggcc atcctcgcgg tggcagaggc gcacggattc cgccgcgtcc
     2641 agccgcacct gcccgcggcg gaacgcgccc gcggcgccgc cctgctgcgg agggcgggac
     2701 gcttcgtcct gctgccctgg gccgatgaag cggcacagga gggccttccg gcggatctct
     2761 acctgtggga gccgagcccc gcggccacgg gtgtggcggg cggctcggga caggggcatc
     2821 ccatggcctt tccacccccg ggccccttcc tgctggccgg tggactgggg ggagacaacc
     2881 tggcggcgag ggtcgcgatg cttccatccg cggcgcgcgc ccagctgcgc ggcttcgacg
     2941 ccgccagccg cctggaggcc gcgccgggca tcaaggatcc ggcgaaggtg gccgccttcg
     3001 tggcggctgt gaaacaggac attcaggaag gacggtccca tgactgatgc gttcgcgctt
     3061 cccacgcgct tcggcaccca ggagctgggc ggatgctacg ccccggaaac cctcatgcag
     3121 ccgctgctgg acctggaatc ggccttccgc gccgcctcgg tggatcccgc attcctggcg
     3181 gagctcaagg ccgagctgcg ccacttcgtg gggcggccca caccgctcac gcccgcgccg
     3241 cggctggcgg cgaagctggg gctcaggtcc ctcttcctca agcgggagga cctcacccac
     3301 accggcgccc acaagatcaa caacgccctg gcccaggccc tgctggcccg gcgcatgggc
     3361 aaggcggagg tcatcgcgga gaccggcgcg gggcagcacg gcgtggccac cgccgccgcc
     3421 tgcgcccgcc tgggcctggc ctgcacggtc tacatgggcg tcacggacat ggcccgccag
     3481 gcgccgaacg tggcgcgcat gcgcctcttc ggggcgaggg tcgagcccgt ggcggcgggg
     3541 cagggcaccc tcaaggaggc cgtgaacgag gccctgcgcg cctgggcggg ccgctgcgac
     3601 aaggcccatt acatcctggg ctcggccctg ggaccccatc ccttcccgac gatggtgcgc
     3661 agcttccaga ccgtcatcgg cgaagaggcc cgggcccagg ttctggagca gtccggcgcg
     3721 ctgccggagg tcgtcctggc ctgcgcgggc ggtggcagca acggtctggg cctgctggtg
     3781 cccttcctgg gcgatggcct gcgccgcgtg gccgtggaag ccggaggcca tggcccggcc
     3841 ctgggcgagc atgcggcgcg gctcgacggc ggcctcatgg gcgtgctgca cggctgcagg
     3901 accctgctgc tccaggacgc gcacggccac accgccgaga ccgccagcat cagcgccggg
     3961 ctggactacc ccgccctggg gcccgagctg gcggcgctgg ccctggacgg ccaggtggag
     4021 gtgcggcgcg cttccgacga cgaagccctc gctggcgccc gcctgctttg tgaaaccgaa
     4081 ggcatcctgc ccgccctgga gagcagccac gccctggccc tgctgcccgc cctggccgcc
     4141 gaaggcgccg gcaccgtgct gctgggcctc agcggccgcg gggacaagga cctctccacc
     4201 taccagtcgc gcctggggat ctgacatgag cctgaacccg ctgcttccct tcatcatggc
     4261 cggagatccc gccttagaag ccctgccggc cctgctttcc gaagcgaagg ccctgggcat
     4321 caaagccctg gaggtgggcc tgccccattc ggaccccatc gcggacggcc ccgtgctcca
     4381 ggcggcggcc caccgcgcca tcgcccgggg cgccacaccc ctgcgcgtgc tggaaagcct
     4441 ggcgggcctc acggacagcc ccgacctcat tctcttcacc tacctgaacc cactgctcca
     4501 gatcggggct ccgaagctga aggcgctgct ggcggccacg cccgtgaagg ccctgctggt
     4561 ggtggacctg cccttcggcg aggaacctgg gttcgaggcg gctttgcggg cggcggggta
     4621 ccccatggtg cccctgctgg cgcccaccac caccctggag cgggcccggc aggtgctggc
     4681 ccagcggccg gatccgggcc cctcggcatg tttcgcccag cgtttcgcgt acgtggtggc
     4741 gcggctcggc gtcaccggca cggggcaggg cacggatctg gacccggtcc gggagcgtgt
     4801 ggccggactg aaggcgctca cggaccggcc gctggccgtg ggcttcgggc tatccgatct
     4861 tgcgggcctc accgccgtac gggctctggg agccacaccc gtggtgggtt cggcgctggt
     4921 gcaggctctt gcggaaggga agaccttgag cgaagtcctg gcgcccggtc tatgttgacg
     4981 atcatcagat cgtgaatgga tgggccttcc gtcgggctcg gggacggttg caagggccgg
     5041 acgatttggt atcgtgatcc atcttgccct tcggaaacgg ctgtcaccag ccaaccaccc
     5101 cgggattccg ggattaggag ccatgcgccc atgacccatc gttcacgcct gaccctcacg
     5161 gcactgaccc tcatcgccgc cggcgccttc gcccccatgg cccaggcctc cggcttccag
     5221 ctccgcgagc agagccccct cgcccagggc aatgccttcg cgggcgtcag cgcgggcagc
     5281 ggcgacatca gcgccctctt cttcaacccc gcggtgatga cccagtacag cggcacccag
     5341 ttctccttcg gcggcaccta catcggcatc agcgccaagt tctcggaagg ctccgcctcc
     5401 cgcacgcctg cgctgaccgc cctcggcttc aacgtcgccc ccgtgacgct cgcgcccctg
     5461 agccccatct ccggatcagc cacacacggc aacgctgggg tcccggcggt gctgcccgaa
     5521 ttcaacatca tgtacagcgc cagcgagaac ctgaagttcg gcctctccct gaacgtgccc
     5581 ttcggcctga ccaccgagta cgacggcaac tgggtgggcc gctaccacgg cctcaagtcc
     5641 gagctgaaga ccatcgacat cacgcccagc gtggcctacc gcgtgaacaa gcagttctcc
     5701 ttcggcgccg ccttcatcat ccgcaaggcc gatgcggaac tcaccaacgg cgtggactac
     5761 ggcacggccc tggcgctgaa ggtggggagc gcgctcgcag ccgccggcat gtccacgacg
     5821 gcgcccggcc ccgggcagaa cagccccgt
//
LOCUS       DASUDT010000294         2324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1406200, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000294 DASUDT010000000
VERSION     DASUDT010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406200"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..1229)
                     /gene="hppD"
                     /locus_tag="VFV26_06000"
     CDS             complement(120..1229)
                     /gene="hppD"
                     /locus_tag="VFV26_06000"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEX4845753.1"
                     /translation="MSTPSFALTAPTHQKPASNPMGLSRIDHFQLTGTIERLEPLYRR
                     LGFARLASGTHAWGRMVHLRQQRMDILIFEAEASHPAGRYFQAHGEGVCALNFLVENL
                     DVAIAQARAQGARVMLEPEAHNLGSGRVRFAAIQGVGDVWNFLVERKGEPSPFWPGLS
                     PDAAPAFCDPGLVRVDHLTNNVGPAEMDALVDFYERVYGFVVTREFHIRGALGTGLDS
                     KVVQSANHQVIIPINQPTDEKSQVQEYVTRHKGQGVQHIALSTNDIFHTLRTLRTQGF
                     TFLRVPDTYYELLPGRIAKSGYTVRESLAEARELGIQIDGDETGYLLQIFTEDQIGPL
                     FFEIIQRRGNMGFGEGNFQALYDSIELDQKKRGVL"
     gene            complement(1410..>2324)
                     /locus_tag="VFV26_06005"
     CDS             complement(1410..>2324)
                     /locus_tag="VFV26_06005"
                     /inference="COORDINATES: protein motif:HMM:NF023413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845754.1"
                     /translation="VQRGTLKAGDIFVAGATMGRVRAMFDHLGQRVNEAGPSSAVQIL
                     GFEEVPSAGDNFQVVEDEAKARTIATFRQEKAKLAAQQKQRATLETLFSTLKDGQVKE
                     LALIIKADTQGSVESLVGQLERLSTDKVRVRIIHSAAGTVTENDVLLAEASKATIIGF
                     QTRAEKKTEELAREEGVDLRFHDIIYKVTEEIEQAMVGMLDATDKETIHGQAEIRQLF
                     KIGKTVIAGSFVTEGKIQKAYKVRVKRGEEVLFEGGLKNLKRFKEDVTEVKNGLDCGI
                     SLDGFDELKEGDILEFYSREKVIATSLS"
BASE COUNT          358 a          688 c          833 g          445 t
ORIGIN      
        1 cacagcacgc cccgcttttt ctgatccagc tcgatggtcg cgaccactgg gtggtggagc
       61 aggctccggg ggagcctgcg gagccgggac ccggtgagga gcgaatcacg aaaggaggat
      121 cacagcacgc cccgcttttt ctgatccagc tcgatggagt cgtacagggc ctgaaagttc
      181 ccctcgccga agcccatgtt cccccgccgc tggatgatct cgaagaagag cggcccgatc
      241 tggtcctcgg tgaagatctg gagcaggtag ccggtttcgt cgccatcgat ctggatgccc
      301 agctcccggg cctccgccag gctttcgcgg acggtgtagc cgctcttggc gatgcggccc
      361 ggcagcagct cgtagtaggt gtccggcacg cggaggaacg tgaagccctg ggtccggagg
      421 gtgcgcaggg tgtggaagat gtcgttggtg gagagggcga tgtgctgcac cccctggccc
      481 ttgtgccggg tgacgtactc ctgcacctgg ctcttctcgt ccgtgggctg gttgatgggg
      541 atgatcacct ggtggttggc gctctggacc accttggagt cgaggcccgt gcccagggcg
      601 ccgcggatgt ggaactcgcg ggtgacgacg aagccgtaga cgcgctcata gaagtccacc
      661 agggcgtcca tctcggcggg gcccacgttg ttggtgaggt ggtccacccg caccaggccg
      721 gggtcgcaga aggccggggc ggcgtcgggt gagaggccgg gccagaaggg ggacggctcg
      781 cccttccgct ccacgaggaa attccacaca tcgcccacgc cctggatggc ggcgaagcgg
      841 accctgccgc tcccgaggtt gtgggcctcg ggttcgagca tcacccgggc gccctgggcg
      901 cgggcctggg cgatggccac gtccaggttc tccaccagga agttgagggc gcagacgcct
      961 tcgccatggg cctggaaata gcgtcccgcg gggtgcgagg cctccgcctc gaagatgagg
     1021 atgtccatgc gctgttgacg caggtggacc atgcgtcccc aggcgtgggt gccgctggcc
     1081 aggcgggcga agcccaggcg ccggtagagg ggctccagac gctcgatggt gcccgtgagc
     1141 tggaagtggt cgatgcggga aaggcccatg gggttgctgg cgggtttctg atgtgtgggg
     1201 gctgtgagag cgaagctggg ggtggacatg gcatcctcgg cggggtcgat gtcccagtct
     1261 ggaatcgacg gggagtgacg agaatcacat gaatgctgat tactgtaatg taatcaatat
     1321 ttaaacacca ttgagtcaat tatggaaatc aataaaaaac gggcccgcaa tgcgggcccg
     1381 ttcgcgatcc gcgcggagcg cggatcgtgc tagctgagcg aggtcgcgat gaccttctcg
     1441 cggctgtaga actcgaggat gtccccttcc ttcagctcgt cgaagccgtc gagggagatg
     1501 ccgcagtcga ggccgttctt cacctcggtc acgtcctctt tgaagcgctt gaggttcttg
     1561 aggccgccct cgaagaggac ttcctcgccg cgcttcacgc ggaccttgta ggccttctgg
     1621 atcttgcctt cggtgacgaa ggatccggcg atgacggtct tgccgatctt gaagagctgg
     1681 cggatctcgg cctggccgtg gatggtctcc ttgtcggtgg cgtccagcat gccgaccatg
     1741 gcctgctcga tctcttccgt gaccttgtag atgatgtcgt ggaagcgcag atccacgccc
     1801 tcttcgcggg cgagctcctc ggtcttcttc tcggcccggg tctggaagcc gatgatggtg
     1861 gccttggagg cctcggcgag gagcacgtcg ttctcggtga cggtgccggc ggcgctgtgg
     1921 atgatgcgca cgcggacctt gtcggtgctg aggcgctcca gctggcccac cagggattcc
     1981 acggaaccct gggtgtcggc cttgatgatg agcgcgagct ccttgacctg gccgtccttg
     2041 agggtgctga acagggtctc cagggtggcg cgctgcttct gctgcgcggc cagcttggcc
     2101 ttctcctggc ggaaggtggc gatggtgcgg gccttggcct cgtcctcgac cacctggaag
     2161 ttgtcgccgg cggagggcac ctcctcgaag ccgaggatct gcaccgcgct ggaggggccg
     2221 gcctcgttca cgcgctggcc gagatggtcg aacatggcgc ggacgcggcc catggtggcg
     2281 ccggccacga agatgtcgcc ggccttgagg gtgccgcgct gcac
//
LOCUS       DASUDT010000295         5782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_235027, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000295 DASUDT010000000
VERSION     DASUDT010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5782
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235027"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VFV26_06010"
     CDS             <1..432
                     /locus_tag="VFV26_06010"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX4845755.1"
                     /translation="LDRLHGKPAQPPAGPVPKSLPYLKRQLESYFSGNLRDFNIPMVA
                     IGTEFQQRVWRELEKIPYGQAISYLELARRLGDEKCIRAAARASGANPIAILIPCHRV
                     IGSDGSLVGYAGGLDMKEFLLRLEGVLPKAPSQPRLPLEWD"
     gene            501..1913
                     /locus_tag="VFV26_06015"
     CDS             501..1913
                     /locus_tag="VFV26_06015"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HEX4845756.1"
                     /translation="MRWTDEHLYERILAKDASFDGRVLTGVLTTGIYCLPSCPARKPL
                     ARNVRFFPDEAAAQAAGLRPCKRCRPEAFYRGDDADLARLEGAMAQAQADPAAFPEAG
                     ALAEAAGVGLTKLKTLFREHAHTQPAAFLQRARIQAACARLEAQGPALVDLAVAVGFE
                     SPSGFHEAFRRQTGLAPGAYRDMLGSDRFTLALPESTRIADLLRFHGRDPESVSERVQ
                     GTTLRKAAFIGGRPAILSLAFSPGTVAVSLEGPRGPRAMAETHRAALRLLAWQGDPAP
                     FEAAHPPLAQGREGLRVPLTLDPFEALVWAILGQQVNLAFAYALRRDLIRLAGAPVGE
                     LIAHPEAAQIAALDHGDLLARRFSGRKAEYLLHSAAKVAAGELRLDGLLTATGAGKAL
                     QALRGCGPWTAQYVLMRGLGFRDCVPVGDAALTLALQRWFKLDVRPDAPETLRLMAPF
                     APHRSLATFHLWASLKGVPA"
     gene            1910..2440
                     /locus_tag="VFV26_06020"
     CDS             1910..2440
                     /locus_tag="VFV26_06020"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX4845757.1"
                     /translation="MTGIHRLDTSLGPVQAAFDAQCAVIYLGFADHEFRESLLAKLAR
                     LDPVPAAPAGAMARLRDQLEAYATEGRTAFDVPFRLHGSPFEQRVWAELQRIPFGETR
                     SYGQLAAALGDRNLSRAVGRANGANPVSILVPCHRVIGAGGALTGYAGGLARKARLLA
                     LEGAISPGASRPAASR"
     gene            complement(2403..2801)
                     /locus_tag="VFV26_06025"
     CDS             complement(2403..2801)
                     /locus_tag="VFV26_06025"
                     /inference="COORDINATES: protein motif:HMM:NF016211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEX4845758.1"
                     /translation="MSVTPPSRPWLHPLLLAAGLLCLVLAVLGLFLPLLPATPFLLLA
                     AACFAKSSERLHAWMLRHRRFGPLLNDWETQRAIRPAAKRSATAAILASAALTLAFTR
                     MPKVSQAALGLSLAGVLAFIWTRPDGTRPD"
     gene            complement(2798..3157)
                     /gene="speD"
                     /locus_tag="VFV26_06030"
     CDS             complement(2798..3157)
                     /gene="speD"
                     /locus_tag="VFV26_06030"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:TIGR03330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HEX4845759.1"
                     /translation="MSALGRHLLVEFTGCEAAVLADLERITAAMLEAARASGATIVTH
                     SFHHFSPHGVSGAVIIAESHLAIHTWPEHRFAAVDYFSCGAVDTGAALALLQSALGAT
                     ATETLSLTRGPLGRLEG"
     gene            complement(3154..4344)
                     /locus_tag="VFV26_06035"
     CDS             complement(3154..4344)
                     /locus_tag="VFV26_06035"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845760.1"
                     /translation="MAWQGPIERLAWGGKGVGREADGRLLLLEAPFALFPGEVVEATV
                     IWKARHGEGRVTRWITRDPRRASAACPVAGTCGGCELWEAGRHAPELKRQMAADLLRR
                     QLGEEVAWEWRPAPEEARRHRIQLHWDGTGLGYFRRHSHALVPVTACPAAADCLSLAI
                     PRLQAALVAHVLTSRPGRWELSTGTPEGEVLATDERGRTWRLEPDGWHRSAGPLRHRF
                     GAITLEHEPGAFFQVSPPWAAEAFGGLLESWGVGGRTLYDLYGGVGLFSALLGTRFQH
                     RVLVESGDAAVAWARRNLEALGLPSECLVGDVAAWAPECLGEPADVILLDPPRAGLEP
                     ALSDRLCTAGAGTLVLVGCDGAAFCRDLKRLAPAWTLEKLAVLDLFPLTSHVECVALL
                     TKRP"
     gene            4487..>5782
                     /locus_tag="VFV26_06040"
     CDS             4487..>5782
                     /locus_tag="VFV26_06040"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX4845761.1"
                     /translation="MRRVLVFQDGGPADVVLGVPGEGTFADCEAWPGLEAAEALVRAA
                     WARLQDRRDMERLHDVGRALVSEQNLDRLLDLILSKARELLQAEAGSIYLLTGDEGRA
                     ELLFAHTQNARISLPFHRVAMPISRETLAGFVAISRESLNLPDVYQIPAGAPYHFNDS
                     FDRQAGYRTTSALVVPMLDTEGQVLGVLQLLNRLEEDGRAAAFSAADQRMAQSLAGQA
                     AVAVKNAQLREEIERLFEGFVAASVTAIEARDPVTSGHSGRVADLTVGLAEAVNATPN
                     GPYGTLSFSDRQLRELRYASLLHDFGKVGVREQVLVKAKKLDPSQLELILQRLRQREL
                     EGALEALAQAWKGGGTFDLWERTVQDRQAEAERLIHLVRQSNEPTVLPQEVAEGLGLL
                     EGLTYSHWSGERRDLVDGADLASLRIRKGNLSEAERLEIE"
BASE COUNT          821 a         2054 c         2126 g          781 t
ORIGIN      
        1 ttggatcgcc tgcatgggaa gccggcccag cccccggccg gtccagtccc gaagagcctg
       61 ccctacctga agcggcagct ggagtcctat ttttcaggga accttaggga cttcaatatc
      121 cccatggtgg ccatcggcac cgaattccag cagcgggtgt ggcgggaact ggaaaagatc
      181 ccctacggcc aagccatttc atacctggag ctggcgaggc gcctggggga cgagaagtgc
      241 atccgtgcgg cggccagggc gagcggtgcc aaccccatcg ccatcctcat cccctgccac
      301 cgggtcatcg ggtccgacgg ctccctggtg ggctatgccg ggggcctgga catgaaggag
      361 ttcctgttgc gcctggaggg cgtgctgccc aaggccccgt cccagccccg cctgccactg
      421 gaatgggact gaccgctgga aaagaattcc ggcgccgccc atcggaggac ttctccggcc
      481 cgcgctccta gcatggaccc atgcgctgga cggacgagca cctctacgaa cggatcctgg
      541 cgaaggacgc gtccttcgac gggcgggtgc tcacgggggt cctcaccacc gggatctact
      601 gcctgccctc ctgcccggcg cggaagcccc tggcccgcaa cgtgcgcttc ttcccggacg
      661 aagccgcagc ccaggcggcg gggctgaggc cctgcaagcg gtgccgcccc gaggccttct
      721 accggggcga cgatgcggat ctggcccggc tggagggggc catggcgcag gcgcaggcgg
      781 atccggcggc ctttccggag gccggggcgc tggcggaagc cgccggtgtg ggactgacca
      841 agctgaagac gctgttccgc gagcacgccc acacccagcc cgcggccttc ctccagcggg
      901 cccgcatcca ggccgcctgc gcgcggctgg aagcgcaagg cccggccctg gtggatctgg
      961 ccgtcgccgt gggcttcgaa agcccctcgg gtttccacga ggccttccgt cgccagacgg
     1021 ggctggcccc cggcgcctat cgcgacatgc tgggctccga ccgcttcacg ctggccctgc
     1081 cggaaagcac ccgcatcgcc gatctgctgc ggttccacgg ccgcgacccg gagagcgtat
     1141 ccgagcgggt gcagggcacc accctccgca aggccgcttt catcgggggg cgcccggcca
     1201 tcctgagcct ggccttcagc cccgggacgg tggcggtctc cctggagggc ccgcggggcc
     1261 cccgggccat ggccgagacg caccgggccg ccctgcggct gctggcctgg cagggcgacc
     1321 ccgccccctt cgaggcggcc catccgcccc tggcgcaggg ccgggaaggc ctgcgggtgc
     1381 cgctcacgct cgatcccttc gaggccctgg tgtgggccat cctgggccag caggtgaacc
     1441 tggccttcgc ctacgccctg aggcgcgatc tgatccgtct ggcgggcgcg ccggtgggcg
     1501 agctcatcgc tcatccggag gctgcgcaga tcgcggccct ggatcacggg gacctgctgg
     1561 cccggcggtt ctcggggcgc aaggccgagt acctgcttca ctcggccgcg aaggtggcgg
     1621 cgggcgagct gcggctggac ggcctgctca cggccaccgg ggccgggaaa gccctgcagg
     1681 cgctgcgggg ctgcggtccc tggaccgccc agtacgtgct gatgcggggc ctgggcttcc
     1741 gcgactgcgt gcccgtgggg gacgcggccc tcaccctcgc cctccagcgc tggttcaagc
     1801 tcgacgtgcg cccggacgcg ccggagaccc tgcgcctcat ggcccccttc gcgccccacc
     1861 gcagcctcgc caccttccac ctctgggcca gcctgaaggg agtccccgca tgacgggaat
     1921 ccaccgcctc gatacctcgc tcgggccggt gcaggccgcc ttcgatgccc agtgcgccgt
     1981 gatctacctg ggcttcgccg accacgagtt ccgcgagtcc ctgctggcca agctggcccg
     2041 cctggatccc gtgccggcgg ctcccgccgg agccatggcc cgcctgcggg accagctgga
     2101 ggcctatgcc accgagggcc ggacggcgtt cgatgtgccc ttccgcctcc acggcagccc
     2161 cttcgagcag cgcgtctggg ccgagctcca gcgcatcccc ttcggcgaga cccgcagcta
     2221 cggccagctg gccgcagccc tgggcgaccg gaacctcagc cgtgccgtgg gccgggccaa
     2281 cggcgccaac cccgtgtcca tcctcgtgcc ctgccaccgg gtgatcgggg ccggtggcgc
     2341 cctcacgggc tacgcgggcg gcctggcccg gaaggcgcgg ctgctggcgc tggaaggggc
     2401 gatcagtccg ggcgcgtccc gtccggccgc gtccagatga aggccaggac acccgccagg
     2461 ctcaggccca gagccgcctg actgaccttc ggcatccggg tgaaggcgag ggtgagggcg
     2521 gcgctggcca ggatcgcggc ggtggccgaa cgcttggcgg cgggccggat ggcccgctgc
     2581 gtctcccagt cgttcagcag gggcccgaag cgccggtggc gcagcatcca cgcatggagc
     2641 cgctccgagg acttggcaaa gcaggcagcg gccagcagca ggaagggggt ggccggcagc
     2701 aggggcagga agaggcccag gacggccagc acgaggcaca gcaggccggc ggccaggagc
     2761 agggggtgga gccaggggcg ggacggcggg gtcacgctca tccctccagg cggcccaggg
     2821 gcccgcgggt gaggctcagg gtctccgtgg ccgtggcccc cagggccgat tgcagcaggg
     2881 ccagggccgc gcccgtgtcc acggcgccgc aggagaagta gtccacggcg gcgaagcggt
     2941 gctcgggcca ggtgtggatg gccaggtggc tttcggcgat gatcaccgcg ccgctgacgc
     3001 cgtgggggct gaagtggtgg aagctgtgcg tgacgatggt ggcgccggag gcccgggcgg
     3061 cctccagcat ggcggcggtg atgcgctcca ggtcggcgag gacggcggcc tcgcagcccg
     3121 tgaactccac gagcaggtgg cggcccaggg cgctcaaggc cgcttggtca gcagggccac
     3181 gcactccaca tggctggtga gggggaagag gtccagcacg gccagcttct ccagggtcca
     3241 ggccggggcc aggcgcttca ggtcccggca gaaggcggcg ccatcgcagc ccaccagtac
     3301 gagggtcccg gcaccggcgg tgcacaggcg gtcgctgagc gccggttcca ggcccgcccg
     3361 gggcggatcc agcaggatga cgtcggcggg ctcgcccagg cactcgggcg cccaggccgc
     3421 cacatcgccc acgaggcatt ccgaaggcag gcccagggcc tccagattgc gccgggccca
     3481 ggccacggcg gcgtcgccgg attccaccag cacgcggtgc tggaagcggg tcccgagcag
     3541 ggcggagaac agccccacgc ccccgtaaag gtcatagagg gtgcggcccc ccacgcccca
     3601 ggattccagc aggccgccga aggcttcggc ggcccagggc gggctcacct ggaagaaggc
     3661 gccgggttcg tgctccagcg tgatggcgcc gaagcggtgc cgcaggggtc cggcgctgcg
     3721 gtgccagcca tcgggttcca gccgccaggt ccggccccgc tcgtccgtgg ccaggacctc
     3781 gccttccggc gtgccggtgg acagctccca gcggcctgga cgggaggtga ggacgtgggc
     3841 caccagagcc gcctggagcc gcgggatggc cagggacagg caatccgccg cggcggggca
     3901 ggcggtgaca ggcaccaggg catggctgtg gcggcggaag tagccgaggc cggtgccgtc
     3961 ccagtggagc tggatgcggt ggcggcgggc ttcttccggg gcgggacgcc attcccaggc
     4021 cacctcctcg cccagctggc ggcgcaggag gtcggcggcc atctggcgct tgagttcagg
     4081 ggcgtgccga cccgcctccc agagttcgca gccgccgcag gtgccggcca cggggcaggc
     4141 cgcggaggcc cggcgggggt cgcgggtgat ccagcgggtg acgcggccct cgccgtggcg
     4201 cgccttccag atgacagtgg cctccaccac ctcgcccgga aagagggcga agggggcctc
     4261 cagcagcagc agacggccat cggcttcgcg gcccacgccc ttgccgcccc aggccagcct
     4321 ttcgatgggg ccttgccaag ccacggccgg aacaggggaa ctccgatatg ctggcggcac
     4381 cttcgccgtc gttttcgtca tcctggagcc tgattccgcc ttgcgattca cggtagccgt
     4441 ccccccagag caccgtagca tcctcctgga gcgcatggcc ggggagatgc gccgggtcct
     4501 ggtcttccag gatggtggcc ccgcggacgt ggtcctgggc gtccccgggg agggcacctt
     4561 tgcggactgc gaggcctggc ctggcctgga ggccgccgag gccctggtgc gggcggcctg
     4621 ggcccggctc caggaccggc gggacatgga gcggctccac gacgtggggc gggccctggt
     4681 gtccgagcag aacctggacc ggctgctgga cctgatcctc agcaaggccc gggaactgct
     4741 gcaggccgag gcggggtcca tctacctgct caccggcgac gagggccgcg cggaactgct
     4801 cttcgcccac acccagaacg cccggatcag cctgcccttc caccgggtcg ccatgcccat
     4861 ctcccgggag accctggcgg gcttcgtggc gatcagccgg gaaagcctca acctccccga
     4921 tgtgtaccag atcccggcgg gtgcccccta ccatttcaat gacagcttcg accgtcaggc
     4981 tggatatcgc accacctctg ccctggtggt gcccatgctc gataccgaag gacaggtcct
     5041 gggcgtcctg cagctgctca accgtctgga ggaggatggg cgggccgccg ccttctccgc
     5101 cgcagaccag cggatggccc agagcctggc gggccaggcg gcggtggccg tgaagaacgc
     5161 ccagctgcgc gaggagatcg agcggctctt cgaaggcttc gtggccgcct ccgtgaccgc
     5221 catcgaggcc cgggatcccg tcaccagcgg ccattcgggc cgggtggcgg acctcaccgt
     5281 gggcctggcg gaggccgtca atgccacgcc caacgggccc tatgggaccc tgtcgttctc
     5341 ggaccgccag ctgcgggaat tgcgttatgc cagcttattg cacgatttcg ggaaagtcgg
     5401 cgtccgcgag caggtgctgg tgaaggccaa gaagctggat cccagccagc tggagctcat
     5461 cctccagcgg ctccgccagc gggagctgga aggggccctc gaggccctgg cccaggcctg
     5521 gaagggcggg gggaccttcg acctctggga acggaccgtc caggaccgcc aggccgaggc
     5581 ggagcggctc atccacctgg tgcgccagag caacgaaccc acggtgttgc ctcaggaggt
     5641 ggctgagggc ctgggtctgc tggagggcct cacctattcg cactggagcg gcgagcggcg
     5701 ggacctggtg gacggggcgg acctggccag cctccgcatc cgcaagggga acctttccga
     5761 ggcggagcgc ctggagatcg aa
//
LOCUS       DASUDT010000296         3326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_80576, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000296 DASUDT010000000
VERSION     DASUDT010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3326
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80576"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1012
                     /locus_tag="VFV26_06045"
     CDS             <1..1012
                     /locus_tag="VFV26_06045"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX4845762.1"
                     /translation="PWLRNVTFKAEGSAPDLPEDAQQIRLPGGRWRLVRAAEPTAAEA
                     TQPPVAGIPPESERRYLAPSPLVPFRDPAFDGLIKRMALPPGLPRWELARRVTASVFD
                     WISDKDFTVGFASALEVCRTPRGDCTEHGVLAVALLRRLGVPARGVTGWVGLGETLGL
                     HFWVEVKLRDRWVPVDPTFDQAPASALRIKLGDTDLADLGGVGWEGAASAFSGVRWVA
                     EREGAAPWGAGIRIEGDQVTASDGSRLRLPGGRWTLVRGKLTLNGTWALEAALRPGHA
                     QLAGARRLAGPRTLREGWWIPASRSLWMDLGQGRWLRLEGVSEPSAYQLLDQLMAPAR
                     VS"
     gene            complement(982..1485)
                     /locus_tag="VFV26_06050"
     CDS             complement(982..1485)
                     /locus_tag="VFV26_06050"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4845763.1"
                     /translation="MSLQEELQMSTLPAPGIQVMLQLMLTREAVVRVQERLFEAHGLT
                     IQQYNVLRIVRGGPTKGHPIYEIERRMIYRFANVTRLVDRLEAQGLLKRVADAKDRRV
                     SRVVISPKGKRLMERLDEPVQAMATQLTSCCDEQECLAMSNWLERLREHCQQQEGLHE
                     TLAGAIN"
     gene            1628..>3326
                     /locus_tag="VFV26_06055"
     CDS             1628..>3326
                     /locus_tag="VFV26_06055"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX4845764.1"
                     /translation="MSLGLFQGEKVGLIGRNGAGKSTLFRLLTGDEIPDSGEVVITQG
                     QRIARLSQEPHFAPGASVRQALEAALADHSALLDRHQEIHEILHGASAQAESRLLDEL
                     QNVEHQIERWGWDLAPRLKAAATTWGLEDLDAEVESLSGGWRKRVALAQAWLKEPDVL
                     VLDEPTNHLDPDQVEKLEAWLQAYDGALLLITHDRHLLDAVATRMLELDEGALRSYEG
                     GYSDYLLEKSDREFREARLTEHMQNRLRREMAWLRRGAKARTRKSKLRIQDVLDLKDD
                     VEDRTRLDIRQGLSFASGLNRSDALIRAEGLGFAYPGGAELLDGLDLSLQRGMRIALL
                     GPNGCGKSTLLKVLLGDLEPTAGEVVRHPKISITTISQGRGELDGARSILDNLAERAS
                     VVDTGNGTVLAHVYLTRFGFPVDQQARPAATLSGGERNRLLLAKAMLSPADLLVLDEP
                     TNDLDIPTLQNLEEALLGFQGTLLLVSHDRFFLDQVATHTLAWNGAGTPRWELYEGAP
                     TTVRSLREARAAAQEAPKAEASRSAVKAESARSRKPGLSQKEQRRLAEVEQAMDALHT
                     "
BASE COUNT          492 a         1209 c         1140 g          485 t
ORIGIN      
        1 gccctggctg cggaatgtga ccttcaaggc ggagggctcc gcgccagacc tccccgagga
       61 tgcccagcag atccggcttc ccggcgggcg gtggcggcta gtgcgcgcgg cggaacccac
      121 ggcggccgag gcaacccagc cccccgtggc gggcattccg ccggagagtg aacgccgcta
      181 cctggccccc agccccctgg tgcccttccg cgatcccgcc ttcgacgggc tcatcaagcg
      241 catggccctt ccccccggtc tgccccgctg ggagctcgcc aggcgggtga cggcctcggt
      301 cttcgactgg atctccgaca aggacttcac cgtgggcttc gcctcggccc tggaggtctg
      361 ccgcacgccg cgcggcgact gcaccgagca tggcgtgctg gccgtggccc tcctgcggcg
      421 cctgggcgtc ccggcccgcg gcgtcaccgg ctgggtgggg ctcggcgaaa ccctgggcct
      481 gcacttctgg gtggaggtga agctgaggga ccgctgggtg ccggtggatc ccaccttcga
      541 tcaggccccg gcctcggccc tccgcatcaa gctcggggac acggatcttg ccgatctcgg
      601 gggcgtgggc tgggagggcg ccgcctccgc cttctcaggc gtccgctggg tggcggaacg
      661 cgaaggcgcc gcgccctggg gcgcgggcat ccgcatcgaa ggcgaccagg tcacggcctc
      721 cgacggaagc cggctgcgcc tgcccggcgg acgctggacc ctggtccgcg ggaagctcac
      781 cttgaacggc acctgggccc tggaagccgc cctgcggcca ggccacgccc agctggctgg
      841 cgcccgccgg ctggcgggtc cgcggaccct gcgggagggg tggtggattc cggcttcccg
      901 cagcctgtgg atggatctgg gccagggccg ctggctgcgc ctggagggag tctccgagcc
      961 ttccgcctac cagcttctcg atcagttgat ggcgcccgcc agggtttcgt gaagcccctc
     1021 ctgctgctgg cagtgctccc gcaggcgctc cagccagttc gacatggcca ggcattcctg
     1081 ctcatcgcag cagctggtga gctgcgtggc catggcctgc acgggctcgt ccagccgctc
     1141 catgaggcgc ttccccttgg gggagatgac cacgcggctc acgcggcggt ccttggcatc
     1201 ggccacccgc ttgagcaggc cctgcgcctc caggcggtcc accagccgcg tcacgttggc
     1261 gaagcggtag atcatccgcc gctcgatctc atagatgggg tggcccttgg tgggcccgcc
     1321 ccggacgatg cgcaagacgt tgtactgctg gatcgtcagg ccgtgggcct cgaaaagccg
     1381 ctcctggacg cggaccacgg cctcccgcgt gagcatcagc tggagcatca cctggatccc
     1441 cggggccggg agcgtcgaca tctggagttc ttcctgtagg gacatgcctg cctcacggat
     1501 tctttggggg caaggatcgc cccatccgtg ggattctgga aggtcgtagg agcccttctt
     1561 gccatccatc gccctgagtt tgatcaatgt cacgaaacgt tatggcgcga cacccattct
     1621 ggatggattg agcctcggtc tcttccaggg cgaaaaggtc ggcctcatcg gccgcaacgg
     1681 cgccggcaag agcacgctgt tccggctgct gaccggggac gagatccccg actccgggga
     1741 agtcgtcatc acccagggcc agcgcatcgc ccgcctgagc caggagcccc acttcgcccc
     1801 gggcgccagc gtccggcagg ccctggaggc cgcgctggcg gaccacagcg cgctgctgga
     1861 ccgccatcag gagatccacg aaattctcca cggcgcctcc gcccaggcgg agagtcggct
     1921 ccttgacgaa ctgcagaacg tggagcacca gatcgagcgc tggggctggg atctggcccc
     1981 gcggctcaag gcggccgcca ccacctgggg cctggaggac ctcgacgccg aagtggaatc
     2041 cctgtccgga ggctggcgca agcgcgtggc cctggcccag gcctggctca aggaacccga
     2101 tgtgctggtg ctggacgagc ccaccaacca cctggaccct gaccaggtgg agaagctgga
     2161 ggcctggctc caggcctacg acggggccct cctcctcatc acccacgacc gccatctgct
     2221 ggatgcggtg gcgacgcgga tgctggaact ggacgaaggg gccctccgga gctacgaggg
     2281 cggctacagc gactacctgc tggagaaatc cgaccgcgag ttccgcgagg cgcggctcac
     2341 cgaacacatg cagaaccgcc tgcggcggga gatggcctgg ctgcggcgcg gcgccaaggc
     2401 ccgcacccgc aagtccaagc tgcgcatcca ggatgtgctg gacctcaagg acgacgtgga
     2461 ggaccgcacg cgcctggaca tccgccaggg cctgtccttc gcctcgggcc tcaaccgcag
     2521 cgacgccctc atccgcgccg agggcctggg cttcgcctat ccgggcgggg ccgagctgct
     2581 ggatggcctc gacctcagcc tccagcgcgg catgcgcatc gccctgctgg gccccaacgg
     2641 ctgcgggaaa tcgaccctgc tcaaggtgct cctgggggat ctggaaccca ccgccggcga
     2701 ggtggtccgc catcccaaga tctccatcac caccatctcg caggggcgcg gcgagctcga
     2761 cggggcccgc agcatcctgg acaacctcgc ggagcgggcc tccgtagtgg acacggggaa
     2821 cggcaccgtg ctcgcccacg tctacctcac gcggttcggc ttcccggtgg accagcaggc
     2881 ccgccctgcg gccaccctca gcggcggcga gcggaaccgg ctgctgctgg ccaaggccat
     2941 gctcagcccc gccgacctgc tggtgctgga cgaacccacc aacgacctgg acatccccac
     3001 cctccagaac ctcgaagagg ccctgctggg cttccagggc accctgctgc tggtgagcca
     3061 tgaccgcttc ttcctggacc aggtggccac ccacaccctg gcctggaacg gggccggcac
     3121 cccccgctgg gagctgtacg agggggcccc cacgacggtg cgcagcctgc gggaggcccg
     3181 ggccgcggcc caggaggctc cgaaggccga ggcctcccgc tccgcggtga aggcggagtc
     3241 ggcccgttcc cgcaagcccg ggctctccca gaaggagcag cggcgcctgg cggaagtgga
     3301 gcaggcgatg gacgccctcc acaccc
//
LOCUS       DASUDT010000297         2012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1582708, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000297 DASUDT010000000
VERSION     DASUDT010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582708"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..965)
                     /locus_tag="VFV26_06060"
     CDS             complement(171..965)
                     /locus_tag="VFV26_06060"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845765.1"
                     /translation="MRPHISIRGVHKVFQSGGQDVYALKAIDLEVARGEFVCLLGPSG
                     CGKSTLLNAVAGFSLPTSGGIDVEGAPITAPGPDRGMVFQEYALFPWMTVEQNIAFGL
                     QIKGEAKEAIQTRVGSLLELLHLQDFRRRFPKDLSGGMRQRVAIARVLALDSPIMLMD
                     EPFGALDALTRRNLQDELLRLWTELRKTILFVTHSIEEALYLADRTVVMTYRPGTIKR
                     DLRVDLPRPRDVASPAFNALKKELSLLLMEEQNRHEQDEFKGAAVD"
     gene            complement(1123..1941)
                     /locus_tag="VFV26_06065"
     CDS             complement(1123..1941)
                     /locus_tag="VFV26_06065"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845766.1"
                     /translation="MKRYRHAASGILVPLAALGFWQLLSTMGWVNATILPSPMQVLIK
                     WWAYLRPLEVFDPAQGSYLAWCFSGELIQDALGSLYRVLVGFLIGGGLALPLGLAMGY
                     SKVAYGLFNPLIQVLRPIPPIAYIPLSILWFGLGNPPAVFLISIGAFFPVLMNTVAGV
                     QNVDSIYLRVGRNLGASRLTQFTRIILPAATPYIFTGARIGMGTAFIVVIVSEMIAVN
                     NGLGYRILEAREYLWSDKIIAGMFTIGLLGLGIDTLMSRLSSRLLRWHRGLEQG"
BASE COUNT          360 a          608 c          703 g          341 t
ORIGIN      
        1 attcaggtcg ccacgtcccc acagatgatc tccatccagg tcgcccagca tgatcaattc
       61 cgacctgatt tcgacgcgat agacggggat taccttccgg tagtaataga agccaaccga
      121 aagcaggaaa gcgccagcgc cccatttgac ccaagtcttc atcacagtcc tcaatccacc
      181 gcggcgccct tgaactcgtc ctgctcgtgg cggttctgct cttccatgag gagcaggctc
      241 agctccttct tcagggcgtt gaaggcgggg ctggccacgt cgcgggggcg gggcaggtcc
      301 acgcgcaggt cgcgcttgat ggtgcccggg cggtaggtca tcaccaccgt gcggtccgcc
      361 aggtagaggg cctcctcgat gctgtgggtg acgaagagga tggtcttcct cagctcggtc
      421 cacagccgca gcagctcgtc ctgcaggttg cggcgggtga gggcgtccag ggccccgaag
      481 ggctcgtcca tgagcatgat gggcgaatcg agggccagca cccgggcgat ggccacgcgc
      541 tggcgcatgc cgccgctgag gtccttgggg aagcgcctcc ggaaatcctg gaggtgcagc
      601 agctccagca ggctgcccac cctggtctgg atggcctcct tggcttcgcc cttgatctgg
      661 agcccgaagg cgatgttctg ctccacggtc atccagggga acagcgcgta ttcctggaac
      721 accatgccgc ggtcgggacc gggggcggtg atgggggcgc cctcgacatc gatcccgccg
      781 gaggtgggca ggctgaagcc cgccaccgcg ttgagcaggg tggatttccc gcagcccgag
      841 gggcccagca ggcagacgaa ctcgccccgg gcgacctcga gatcgatggc cttgagggcg
      901 tagacatcct ggccgccgct ctggaagacc ttgtgcacgc cgcggatgga gatgtggggc
      961 ctcattccgt ttttccttct gcggtgaagg attcaccacg gagacacgga gggagaagga
     1021 ggttcacgga gaaagatcct ttcttctctg cggttctccc gttgttcctc cgtgttctct
     1081 gtgtctccgt ggtggatctt ttgttttgaa cgcagcgtgg catcatccct gctccagtcc
     1141 gcgatgccac cgcagcaggc gtgagctgag gcggctcatg agggtgtcga tgcccaggcc
     1201 cagcaggccg atggtgaaca tgcccgcgat gatcttgtcg gaccagaggt actcgcgggc
     1261 ctccaggatg cggtagccca ggccgttgtt cacggcgatc atctcggaga cgatcaccac
     1321 gatgaaggcc gtgcccatgc cgatgcgcgc ccccgtgaag atgtagggcg tggcggcggg
     1381 caggatgatg cgggtgaact gggtgaggcg cgaggcgccc aggttgcggc ccacgcgcag
     1441 gtagatgctg tccacgttct gcaccccggc cacggtgttc atcagcaccg ggaagaaggc
     1501 cccgatgctg atgaggaaga ccgcgggcgg gttgcccagg ccgaaccaga ggatcgacag
     1561 cgggatgtag gcgatgggcg ggatgggccg cagcacctgg atgagcgggt tgaagaggcc
     1621 gtaggccacc ttgctgtagc ccatggccag ccccaggggc agcgccaggc cgccgccgat
     1681 gaggaagccc accagcacgc ggtagaggct gccgagggcg tcctggatga gctcgcccga
     1741 gaagcaccag gccaggtacg agccctgggc gggatcgaag acctccaggg ggcgcaggta
     1801 ggcccaccac ttgatgagca cctgcatggg ggagggcagg atggtggcgt tcacccagcc
     1861 catggtggac agcagctgcc agaagcccag ggccgccagc gggacgagga tgccggaggc
     1921 ggcgtgtcgg tagcgtttca taccagtccg tcttcaagtg ttaaggattc accacggaga
     1981 cacggaacat aggcacaggg gaggcgccgg gt
//
LOCUS       DASUDT010000298         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_323637, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000298 DASUDT010000000
VERSION     DASUDT010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323637"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1189
                     /locus_tag="VFV26_06070"
     CDS             <1..1189
                     /locus_tag="VFV26_06070"
                     /inference="COORDINATES: protein motif:HMM:NF014869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M4 family metallopeptidase"
                     /protein_id="HEX4845767.1"
                     /translation="PRGAYAHTPSSELVVANLSRPTLAYYVHTELENEVDGTRHTDFL
                     VDAHTGAILESWNALHTSAANGTGRSQYSGTVTLNTNLNGATYELFDTTRGAGVKTYN
                     LNHATTGTGTLYTDADNTWGDGLNYVEGSSTTADNGQTAGVDAHYGVQTTWDMYQNVF
                     GRNGIDGTGSATYSRVHYSNSYDNAFWSDSCFCMTYGDGNSFKTLTSMDVAGHEMTHG
                     VTSRTAALTYRGESGGLNESMSDIFGTLAEFYRGTTGTTIPATGGNWTIGEQLRTTPL
                     RYMYKPSLDGASKDAWSKTLGRLDVHYSSGPMNRCFYFLSQGTGTGNYASTYLPGGMT
                     GIGNDKAGRIVYKALTAYMTSSTTYAGAKTACLNAAVALGYPAGSVEYTAVVNAFKAI
                     NVN"
     gene            1269..1985
                     /locus_tag="VFV26_06075"
     CDS             1269..1985
                     /locus_tag="VFV26_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845768.1"
                     /translation="MDSSTRRTCPSCQTRLSPLAAECPECGLALAPPRQGRPFLFQAS
                     ALAQASFEAPPRALTAPALGRVAAVAVDISPEELERPLTEAPSPIAGPPRAALGFEDP
                     VASFWPLVKVEATEALLLVLVQALALALPAWLAGVSPVRLLTGAWLLVVPYLLAVSWM
                     LFMAPLVLTGRSPFMGRFGVTLPENTPERRMTFSLVHMLSVLCFPLSFLCMVLSPRHQ
                     TLAELLSGQELLARPVGRMR"
     gene            complement(1992..>2999)
                     /locus_tag="VFV26_06080"
     CDS             complement(1992..>2999)
                     /locus_tag="VFV26_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX4845769.1"
                     /translation="LLSKLNKAILGDVTRGLPKLVYYVVQGFTFAILVVAANTAFADF
                     PRLAALQARDGFLPRQFASQGDRLVFSNGILILFFFSGLLVWLFHANTDMLLPLYAAG
                     VFMGFTISQTGMVAHWRKVRGRHWQAKAAINGLGALTAFVVLLDIAITKFIHGAWIVI
                     LLVPILVVIHFNIRRHYVRVKSRLAASRTDAFLPAKHHALVLVNGIHRGVVQSLLYGR
                     LIAGDRVEALTVDLGSDGARESPAMEKLRADWTIYGVGVPLRCLPSPYRKIVEPILEE
                     VDRIRSAEPELALTVILPEFIAPRWWQQFLHNQSALRIKAALLMKPGIIVTSVPMHLP
                     E"
BASE COUNT          488 a         1130 c          930 g          451 t
ORIGIN      
        1 cccccggggc gcctacgccc acacccccag ctccgagctg gtggtcgcca acctctcccg
       61 ccccaccctg gcctactacg tccacacgga gctcgagaac gaggttgatg ggacgcgcca
      121 cacggacttc ctggtggacg cccacaccgg cgccatcctg gaatcctgga acgccctcca
      181 caccagcgcc gccaacggca cgggccgcag ccagtacagc ggcaccgtca ccctgaacac
      241 caacctcaac ggcgccacct acgagctgtt cgacaccacc cgcggcgcgg gcgtgaagac
      301 ctacaacctg aaccacgcca ccaccggcac cggcaccctc tacacggatg ccgacaacac
      361 ctggggtgat ggcctcaact acgtggaggg ttcctccacc accgccgaca acggccagac
      421 cgccggcgtg gatgcccact acggcgtcca gaccacctgg gacatgtacc agaacgtctt
      481 cggccgcaac ggcatcgacg gcaccggcag cgccacctac agccgcgtcc actacagcaa
      541 cagctacgac aatgccttct ggtccgacag ctgcttctgc atgacctacg gcgatggcaa
      601 ctccttcaag accctcacct ccatggatgt ggcgggccac gagatgaccc acggcgtgac
      661 ctcccgcacc gccgccctca cctaccgcgg cgagtccggc ggcctgaacg agtccatgtc
      721 cgatatcttc ggcaccctgg ccgagttcta ccgcggcacc acgggcacca ccattcccgc
      781 caccggcggc aactggacca tcggcgagca gctccgcacc acgcccctgc gctacatgta
      841 caagcccagc ctggatggcg ccagcaagga tgcctggtcc aagaccttgg gccgcctgga
      901 cgtgcactac agctccggcc ccatgaaccg ctgcttctac ttccttagcc agggcaccgg
      961 cacgggcaac tacgcctcca cctacctgcc cggcggcatg accggcatcg gcaacgacaa
     1021 ggccggccgc atcgtctaca aggccctcac ggcctacatg acctccagca ccacctacgc
     1081 cggcgcgaag accgcctgcc tgaacgcggc cgtggccctg ggctaccccg cgggctctgt
     1141 ggaatacacg gccgtggtga atgccttcaa ggccatcaac gtcaactagt ggccgctttc
     1201 ccaagcacag cgccccggtc tgccggggcg ctgttgtttt ggccaccggc gcccgagtag
     1261 tgtgggtcat ggattcctcc acccggcgca cctgccccag ctgccagacc cgcctttccc
     1321 ccctcgcggc ggagtgcccg gagtgcggtc tggccctggc cccgccccgg cagggccgcc
     1381 ccttcctctt ccaggcctcg gccctggccc aggcctcctt cgaggcgcct ccccgggcct
     1441 tgacggcccc cgcactgggc cgggtggcgg cggtggccgt cgacatctcc cccgaggagc
     1501 tggagcgccc tctcacggag gccccctccc ctattgccgg accgcctcgc gcggccctgg
     1561 gcttcgaaga ccccgtcgcc agcttctggc ccctggtgaa ggtggaggcc accgaggccc
     1621 tgctcctggt cctggtccag gccctggccc tggccctccc cgcctggctg gcgggcgtgt
     1681 cgcccgtccg cctgttgacc ggagcctggc tcctggtggt cccctacctg ctggccgtct
     1741 cctggatgct gttcatggcg cccctggtgc tcacgggccg gtcgccgttc atgggccgtt
     1801 tcggtgtgac cctgcccgaa aacacccccg agcgccggat gaccttctcc ctggtgcaca
     1861 tgctgtcggt gctctgcttc cccctcagct tcctctgcat ggtgctgagc ccccgccacc
     1921 agaccctggc agagctgctc agcggccagg agctgctggc gcggcccgtg gggcggatgc
     1981 gctaagggtg actactccgg caggtgcatg ggcaccgagg tcacgatgat cccgggcttc
     2041 atcagcaggg cggccttgat gcggagggcg ctctggttgt ggaggaactg ctgccaccag
     2101 cgcggcgcga tgaactccgg caggatcacc gtgagggcca gttccggctc ggcggaccgg
     2161 atccggtcca cctcctcgag gatgggctcc acgatcttcc ggtaggggct gggcaggcag
     2221 cgcagcggca cgcccacgcc gtagatggtc cagtccgccc gcagcttctc catggcggga
     2281 ctttcgcggg cgccatccga gcccaggtcc accgtgaggg cctccacccg gtcccccgcg
     2341 atgaggcgcc cgtagagcag ggactgcacc acgccccggt ggatgccgtt caccagcacg
     2401 agggcgtggt gcttggcggg caggaaggcg tccgtgcggc tggccgccag gcgggacttc
     2461 acccgcacat agtggcgccg gatattgaag tggatcacca ccaggatggg caccagcagg
     2521 atcacgatcc aggccccgtg gatgaacttg gtgatggcga tgtccagcag caccacaaag
     2581 gccgtgaggg cgcccaggcc gttgatggcg gccttcgcct gccagtgccg cccccggact
     2641 ttccgccagt gcgccaccat ccccgtctgg ctgatggtga accccatgaa cacgcccgcc
     2701 gcgtagaggg gcagcagcat gtccgtgttg gcgtggaaga gccagaccag caggcccgag
     2761 aagaagaaca ggatcaggat gccgttggag aagaccaggc ggtcgccctg gctggcgaac
     2821 tggcggggca ggaagccgtc ccgggcctgg agggccgcca ggcgcgggaa gtccgcgaag
     2881 gccgtgttgg ccgccaccac caggatggcg aacgtgaagc cctggaccac gtaatagacc
     2941 agcttcggca ggcccctggt cacgtcgccg aggatggcct tgttcagctt cgacagcag
//
LOCUS       DASUDT010000299         2575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_588574, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000299 DASUDT010000000
VERSION     DASUDT010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588574"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1298
                     /gene="bioA"
                     /locus_tag="VFV26_06085"
     CDS             <1..1298
                     /gene="bioA"
                     /locus_tag="VFV26_06085"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: protein motif:HMM:TIGR00508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEX4845770.1"
                     /translation="VHEADPPVPVIGGDGCDLLLANGERVLDGISSWWTCLHGHGHPR
                     LVSALERQAAKLDHVMFAGFTHEPALELVARLKPKLPAKLTRAFFSDNGSTAVEVALK
                     MAFQAQLQRGEKGRDRFGALRGGYHGDTLGAVGVGELENFMTGLFRPLLLACERLEVP
                     EDPRRELTPDLAGWPARLEASRQAVRAFFTAHGERLAAFIAEPLIQCAGGMRMWPPEL
                     LQELRAQCDAHGVYLILDEVATGFGRTGTFLACEQAGVAPDLLCLSKGLTGGTLPLSL
                     TWATDELYGHFWGTPASGRAFLHGHSYTGNATACAVACASLALFDDEPVLAKAAALNE
                     AMMAAFTTLSAHPAVRQARVMGAIGACRLVDPATGAAHDPEARFGWRLHRRALDHGLL
                     VRPIGDCLYLLPPLSTPPSRLAEAASTLLDLLEGMTTRE"
     gene            1342..2361
                     /locus_tag="VFV26_06090"
     CDS             1342..2361
                     /locus_tag="VFV26_06090"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX4845771.1"
                     /translation="MKLVTFLKAGTEGIGAVMADGRILDFAAAEPRLAVDMLTLIRRQ
                     DELMPLARALAAAPPAPALVDPAAVRLLAPVPRPVSMRDGYAFRQHVMTARRNRGLEM
                     IPEFDLFPVTYFTNHLAVTGPGEVLVQDHHLTRLDFELEVAIVTGRPLKNATLEEADA
                     AIFGYMVMNDWSARMLQMEEMKLSLGPCKGKDFATSLGPWLVTRDELPLEKTATGELL
                     RARMTCDVNGHRLSDGNVGSMNWTFAQILQRTSYGIQMHPGEVIGSGTVGTGCLLELN
                     GSKVTDNLWLKAGDEVVLEIEGLGRLVNTITHAPERLADVPPTLVGGTLPDLYAGSPT
                     GEAGD"
     gene            2391..>2575
                     /locus_tag="VFV26_06095"
     CDS             2391..>2575
                     /locus_tag="VFV26_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845772.1"
                     /translation="MRRVLALLLAVLAASHAPAQKAPSLRSYFADASPVREGGVKVIP
                     IQTPKGTFKVWTKRFGN"
BASE COUNT          367 a          975 c          846 g          387 t
ORIGIN      
        1 aggtccacga ggccgatccc ccggtgccgg tgatcggcgg ggacggctgt gacctgctgc
       61 tggccaacgg cgagcgggtg ctggacggca tctccagctg gtggacctgc ctgcacggcc
      121 acggccaccc caggctcgtc agcgccctgg agcggcaggc cgcgaagctc gaccatgtga
      181 tgttcgcggg cttcacccac gaacccgccc tggagctggt ggcgcggctg aagccgaagc
      241 tgcccgcgaa gctcacccgc gccttcttct cggacaacgg cagcaccgcc gtggaggtgg
      301 ccctcaagat ggccttccag gcccagctgc agcggggcga gaagggccgc gaccgcttcg
      361 gcgccctgcg gggcggctac cacggcgaca ccctgggcgc cgtgggcgtg ggcgagctgg
      421 agaacttcat gacgggcctc ttccggcccc tgctgctggc ctgcgagcgg ctggaggtgc
      481 ccgaggatcc gcgccgcgag ctgacgcccg atctcgcggg atggcccgcg cgcctggagg
      541 cctcccgcca ggcggtccgc gccttcttca cggcccatgg cgaacgcctt gccgccttca
      601 tcgccgagcc cctcatccag tgcgccgggg gcatgcgcat gtggccgccg gagctgctgc
      661 aggagctgcg cgcccagtgc gatgcccatg gcgtctacct gatcctggat gaggtggcca
      721 cgggcttcgg ccgcacgggc accttcctgg cctgcgagca ggcgggcgtg gcgccggacc
      781 tgctctgcct ctccaagggc ctcacggggg gcaccctgcc cctctcgctc acctgggcca
      841 cggacgagct ctacggccac ttctggggca cccccgcctc cggccgggcc ttcctccacg
      901 gccacagcta caccggcaac gccacggcct gcgccgtcgc ctgcgccagc ctcgccctct
      961 tcgacgacga accggtgctg gcgaaggccg ccgccctgaa cgaagccatg atggcggcct
     1021 tcaccacgct gtccgcccat cccgccgtgc gccaggcccg cgtgatgggt gccatcggcg
     1081 cctgccgcct ggtggatccc gctacgggcg ccgcccatga tcccgaggcc cggttcggct
     1141 ggcgcctcca ccgccgggcc ctggaccacg gcctgctggt gcgccccatc ggggactgcc
     1201 tctacctgct gccgcccctc agcacgcccc cttcccgtct cgcggaagcc gcttccaccc
     1261 tgctggacct cctggaggga atgacgaccc gggagtgatg tttattgttg tgtacactgg
     1321 ccttttaggt tggagcaccc catgaagctg gtcacgttcc tgaaggctgg caccgagggg
     1381 atcggcgccg tgatggcgga tggccgcatc ctcgatttcg cggcggccga gccccgcctg
     1441 gccgtggaca tgctcacgct catccgccgc caggacgagc tcatgcccct ggcccgggcc
     1501 ctcgccgccg cgccaccggc cccggccctg gtcgatcccg ccgcggtccg cctgctggcc
     1561 cccgtgcccc ggcccgtctc catgcgcgac ggctacgcct tccgccagca cgtgatgacc
     1621 gcccgccgca accgcgggct ggagatgatc cccgagttcg acctcttccc cgtcacctac
     1681 ttcaccaacc acctggccgt gaccggtccc ggcgaagtgc tggtgcagga ccaccacctc
     1741 acgcgcctcg acttcgagct ggaggtcgcc atcgtcacgg ggcggcccct gaagaacgcc
     1801 accctggagg aagcggacgc cgccatcttc ggctacatgg tgatgaacga ctggagcgcc
     1861 cgcatgctcc agatggagga gatgaagctc tcgctgggtc cctgcaaggg caaggacttc
     1921 gccaccagcc tgggcccctg gctcgtcacc agggatgaac tgccgctgga gaagactgcc
     1981 acgggcgagc tgctccgcgc ccgcatgacc tgcgacgtga atggacaccg gctgtcggac
     2041 gggaacgtgg gcagcatgaa ctggaccttc gcccagatcc tccagcgcac cagctacggc
     2101 atccagatgc acccgggcga ggtcatcggc agcggcaccg tggggaccgg ctgcctgctg
     2161 gagctgaacg gatcgaaggt caccgacaac ctgtggctca aggccgggga tgaggtggtg
     2221 ctggagatcg aaggcctggg ccgcctggtg aacaccatca cccatgcccc cgaacggctg
     2281 gcagacgtgc ccccgaccct ggtgggcggc acgctcccgg acctctatgc gggctcgccc
     2341 accggcgagg ccggggactg actagactgg ggcatcctcc cggagttccc atgcgccgcg
     2401 tcctcgccct cctgctcgcc gtgctggctg catctcacgc cccggcccag aaagcgccca
     2461 gcctgcgctc gtattttgcg gacgcctccc cggtgcgcga aggcggcgtg aaggtcatcc
     2521 ccatccagac gcccaagggc acgttcaagg tctggaccaa gcgcttcggg aacca
//
LOCUS       DASUDT010000300         2835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1737660, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000300 DASUDT010000000
VERSION     DASUDT010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1737660"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..535)
                     /locus_tag="VFV26_06100"
     CDS             complement(89..535)
                     /locus_tag="VFV26_06100"
                     /inference="COORDINATES: protein motif:HMM:NF013500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEX4845773.1"
                     /translation="MDWSRFATARDPWIHLWRGTAADLVDAAPTGKGPLLCWLRGSRM
                     RTRAALMDEWAAAAQFPPHFGATWDGLRDCLADLPGGGIFLILEADQLLRDAPPEEGL
                     TLMAVLAEVVEDLAPQPFHLVLQVEPARHGALVEGLRTLNVAFREG"
     gene            complement(535..945)
                     /locus_tag="VFV26_06105"
     CDS             complement(535..945)
                     /locus_tag="VFV26_06105"
                     /inference="COORDINATES: protein motif:HMM:NF012755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease domain-containing protein"
                     /protein_id="HEX4845774.1"
                     /translation="MTRWRRTLAHLAGGLVALVALLSPVACGPETPPPTAPQALVEVA
                     PKDPVPAHARATLAYIQQHRYAPPGHMGGRVFGNYEGLLPRYNDRRKRIEYREWDVHP
                     RAEGRTRGAERLVTGSDGRAWYTADHYRTFIEVR"
     gene            complement(974..2275)
                     /locus_tag="VFV26_06110"
     CDS             complement(974..2275)
                     /locus_tag="VFV26_06110"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845775.1"
                     /translation="MTSEATVRALPAPPPAFRWLVLVVISLAMFGNYYVYDAISPLAD
                     VLQKQLGFTDGNIGLLQGIYSVPNILMVLVGGILIDRIGVKKATFLFGVLCFAGALLT
                     ALSPKLWVMASGRLVFGLGAESLIVAVTAAVAQWFRGKELSFAFGINLLIARLGSFAA
                     LNSPTWAKGAFGSWRTPLLIAAVFGFVCVIAAAIYWIMENRAAKHYTLGGQGGTDKVV
                     WGDLLKFSPTYWYVVALCITFYSGIFPFQTFAVKFFQDAHGVSREAGGFLSSMLTLFA
                     MIGTPLFGLMVDRVGKRALFMMAGSLLLIPVYLLMGYTHVSLYVPMALMGIAFSLIPA
                     VMWPSVAYLVPEEKLGTAYGLMTLIQNVGLAGFNFLIGWANDHAAASAANPAGYRLGM
                     WIFSSLGFFGFLFAWLLRRAETGPDAKGLETITTANQPGQQ"
     gene            2466..>2835
                     /locus_tag="VFV26_06115"
     CDS             2466..>2835
                     /locus_tag="VFV26_06115"
                     /inference="COORDINATES: protein motif:HMM:NF019145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845776.1"
                     /translation="MPSRLALRLAAAALLVIPGLAARSVENPVADEARRHLDARVFQL
                     GLDRNHSFGTKNLFEEATGEAHVRMNQFYKGVRVFEGETIVHMRGGAIAGRTDALVRG
                     LNLNVAPSLGAAEALAATHQA"
BASE COUNT          483 a          953 c          966 g          433 t
ORIGIN      
        1 gcgtggatca actggaagcg gaactggcct ccctgcgcga ggagctcggg gccctgcgcg
       61 cggccttcga agccttcaag gcgcagttct agccttccct gaaagccacg ttcaacgtac
      121 gcaagccctc caccagggcc ccatggcggg cgggctccac ctggagcacc aggtggaagg
      181 gctggggcgc caggtcctcc acgacttccg ccagcacggc catgagcgtg aggccttctt
      241 cgggcggcgc atcccgcagc agctgatccg cctccaggat caggaagatg ccgcccccgg
      301 gaaggtcggc caggcagtcc cgcagcccgt cccaggtggc tccgaagtgg ggcgggaact
      361 gcgcggcggc ggcccattcg tccatgagcg ccgcccgcgt ccgcatgcgg ctaccccgca
      421 gccagcagag caggggcccc ttcccggtcg gggcggcatc cacgagatct gccgctgttc
      481 cgcgccacag gtggatccac ggatccctgg cggtggcgaa gcgggaccag tccatcaccg
      541 cacttcgatg aaggtgcggt agtggtcggc ggtgtaccag gcgcggccat cgctgcccgt
      601 gacaagccgt tccgcgccgc gggttcgccc ctccgcacgg gggtgcacgt cccattcgcg
      661 gtattcgatg cgcttgcgcc ggtcgttgta gcgggggagg aggccttcgt agttgccgaa
      721 gacgcggccg cccatgtggc ccggcggggc ataccggtgc tgctggatgt aggccagggt
      781 ggcccgggca tgggcgggga caggatcctt cggcgccacc tccaccaggg cctggggggc
      841 cgtgggcggc ggcgtttcgg gaccgcaggc caccggcgac agcagcgcga ccagggcgac
      901 caggccgcca gccaggtgcg cgagggtcct ccgccagcgg gtcattgggc ctccatggtt
      961 gcggatagca agtctactgc tgcccgggct ggttggcagt ggtgatggtc tcgagcccct
     1021 tcgcgtccgg ccccgtttcc gcccggcgga gcagccaggc gaagaggaag ccgaagaagc
     1081 ccaggctgct gaagatccac atgcccagcc ggtagcctgc cgggttcgcc gcgctggcgg
     1141 cggcatggtc gttggcccag ccgatgagga aattgaagcc cgccagcccc acgttctgga
     1201 tgagcgtcat gaggccatag gctgtgccca gcttctcctc gggcaccagg taggccaccg
     1261 agggccacat caccgcgggg atcaggctga aggcgatgcc catgagggcc atgggcacgt
     1321 agaggctgac gtgggtgtag cccatgagca ggtagacggg gatgagcagc aggctgcccg
     1381 ccatcatgaa gagggcccgc ttgcccacgc ggtccaccat gaggccgaag agcggcgtgc
     1441 cgatcatggc gaagagggtg agcatggacg acaggaagcc gccggcctcg cggctcacgc
     1501 catgggcgtc ctggaagaac ttcacggcga aggtctggaa ggggaagatg ccgctgtaga
     1561 aggtgatgca gagggccacc acgtaccagt aggtggggct gaacttcagc aggtcccccc
     1621 acaccacctt gtcggtgccg ccctggccgc ccagggtgta gtgcttggcg gcgcggttct
     1681 ccatgatcca gtagatggcc gcggcgatga cgcagacgaa gccgaagacg gcggcgatga
     1741 gcagcggcgt gcgccaggag ccgaaggccc ccttggccca ggtggggctg ttgagggccg
     1801 cgaaagaacc caggcgggcg atgagcaggt tgatgccgaa ggcgaagctc agctccttgc
     1861 cacggaacca ctgggccacg gcggcggtga cggccacgat gaggctttcg gcccccaggc
     1921 cgaagaccag acggcccgag gccatgaccc acagcttcgg gctcagcgcc gtgaggagcg
     1981 ccccggcgaa acacaggacc ccgaagagga aggtggcctt cttcacgccg atgcggtcga
     2041 tgaggatgcc acccaccagc accatgagga tgttcggcac gctgtagatg ccctggagca
     2101 gcccgatgtt gccgtccgtg aagcccagct gcttctgcag cacgtccgcc agggggctga
     2161 tggcgtcata gacgtagtag ttgccgaaca tggccaggct gatgaccacc agcaccagcc
     2221 agcggaaggc gggcggcgga gccggaaggg cgcggacggt ggcttcggag gtcatggggc
     2281 tcccggaggg tttctccgat ggtgacaggt gccgggatca acctctaaat agaactgatt
     2341 ctcataaaaa ttaacatctc ttaacgctgc ccctttgcct tccatcatct agcctttctc
     2401 cacaccccct tgccctttct ttcccaccca cccttaccgg agcttttgct ccccggaggt
     2461 cttttatgcc atcccgtctt gcccttcgcc tcgccgccgc cgccctcctg gtgattccag
     2521 gtctcgcggc ccgctcggtc gagaaccccg tcgccgatga ggcccgccgc cacctcgacg
     2581 cccgcgtctt ccagctgggc ctggaccgca accacagctt cggcaccaag aacctcttcg
     2641 aagaggccac cggcgaagcc catgtccgca tgaaccagtt ctacaagggc gtgcgcgtct
     2701 tcgaaggcga gaccatcgtc catatgcgcg gtggcgccat cgccggccgc acggacgcgc
     2761 tggtgcgggg cctcaacctg aacgtggccc cctccctggg cgccgctgaa gccctcgccg
     2821 ccacccacca ggccc
//
LOCUS       DASUDT010000301         2206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_36746, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000301 DASUDT010000000
VERSION     DASUDT010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36746"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1646)
                     /locus_tag="VFV26_06120"
     CDS             complement(<1..1646)
                     /locus_tag="VFV26_06120"
                     /inference="COORDINATES: protein motif:HMM:NF025158.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4178 domain-containing protein"
                     /protein_id="HEX4845777.1"
                     /translation="MSPLASCPSCGAPLAFRPGTMVAVCPYCKALAARRDRDPELIGK
                     VADLVDTGSPLGLGASGRYTGRSFTLAGRVQLKHPLGGVWDEWYLALDDGRWGWLAEA
                     QGRFYLTFTQAPHGTLPALESLQAGGLADLGPDGLWTVGELSEATFHSAEGEIPWAVE
                     PGGTYAFADLSGRNGAFATLDYSEDPPLFFLGREIPLAELGIQGGSRKPPKVGVQSLN
                     CPTCGGTLALRAPDQTQRVGCPSCGSLLSAENGKLAFLKSLKQPRQDVVIPLGAEGLL
                     AGEKVTCIGQLRRSCTVDDTAYPWNEYLLLDSQHGFRWLVQSDGHWSIAEAVAPGEIP
                     QAHDGQKSLWALGATWRRFQDVEAVVEGVWGEFYWAVEQGERVEVTEFVAPPRSLTRE
                     RQTHKGGGAEVNWSLSTYLEPQEVWAAFKLEGAPPAPFNVASFQPNPHKAALAKTALW
                     VVGALGLLLILVMVESMTHRKVELFRQRLDLFDLARIQPGAAEAARNGIPARRPAPAS
                     APPSAEAQEPVYFSGPIEIRNGRQNLAVTLSAPVNNAWIGL"
     gene            complement(1673..>2206)
                     /locus_tag="VFV26_06125"
     CDS             complement(1673..>2206)
                     /locus_tag="VFV26_06125"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4845778.1"
                     /translation="PADGLPTALADASPPCPVFLLSGLSKVAALPQLKLGWIAVRGPG
                     AAEHLEALAFLADQYLSVSAPVQAAASTLLALAPAIRQQVQARLRANLRSLDAALAHH
                     PHLTRLPVEGGWSVLLRRPAVDADEACALRLLEDTATLAHPGSFFDLPGDGHLVLSLL
                     TPEKTFHDGLLRIFPCL"
BASE COUNT          309 a          734 c          863 g          300 t
ORIGIN      
        1 aggccgatcc aggcgttgtt cacgggggcg ctcagggtga cggccaggtt ctggcggccg
       61 ttgcggatct cgatggggcc ggagaagtag acgggctcct gggcctcggc ggagggaggc
      121 gcggatgccg gcgcaggcct ccgggccggg atgccgttcc gggcggcctc ggcggctccg
      181 ggctggatgc gcgccaggtc gaagaggtcc aggcgctggc ggaagagctc caccttgcgg
      241 tgggtcatgg attccaccat gaccaggatc agcagcaggc ccagggcccc cacgacccag
      301 agggcggttt tcgccagcgc ggccttgtgg gggttgggct ggaaggaggc gacgttgaac
      361 ggcgcgggcg gcgcgccttc cagcttgaag gcggcccaga cctcctgggg ctccaggtag
      421 gtggagaggc tccagttcac ctccgcaccg ccgcccttgt gcgtctgtcg ctcgcgggtg
      481 aggctgcggg gcggggccac gaattcggtg acttccaccc gctcgccctg ctccacggcc
      541 cagtagaact cgccccacac gccttcgacg acggcttcca catcctggaa acgccgccag
      601 gtggcgccca gggcccacag gctcttctgg ccgtcgtggg cctgggggat ctcgcccggg
      661 gccacggctt ccgcgatgct ccagtggccg tcgctctgca cgagccagcg gaaaccgtgc
      721 tggctgtcca gcagcaggta ctcgttccag ggataggccg tatcgtccac ggtgcagctg
      781 cgccgcagct ggccgatgca ggtgaccttc tctccggcca gcaggccttc cgcgcccagg
      841 gggatcacca cgtcctggcg cggctgcttc aggctcttga ggaaggccag cttgccgttc
      901 tccgccgaaa gcaggctgcc gcagctgggg cagcccaccc gctgggtctg gtccggcgcc
      961 cgcagggcca gcgtcccgcc gcaggtgggg cagttgaggc tctgcacgcc caccttgggg
     1021 ggcttccggc tgccgccctg gatgccgagt tccgccaggg ggatctcgcg gcccaggaag
     1081 aagaggggcg ggtcttcgct gtaatcgagg gtggcgaagg cgccgttccg gcccgacaga
     1141 tccgcgaagg cgtaagtccc gcccggttcc acggcccagg ggatctcgcc ctcggcgctg
     1201 tggaaggtgg cctcgctgag ctcgcccacg gtccagaggc cgtcgggccc caggtccgcg
     1261 aggccgccgg cctggaggct ctccagggcg ggaagcgtcc cgtgcggggc ctgggtgaag
     1321 gtgaggtaga agcggccctg ggcttcggcc agccagcccc agcggccgtc gtccagcgcc
     1381 aggtaccatt cgtcccagac gccgcccagg gggtgcttga gctgcacgcg gcccgcgagc
     1441 gtgaaggagc ggccggtgta gcggcccgag gcgcccaggc ccaggggcga gcccgtgtcc
     1501 accaggtccg ccaccttgcc gatgagctcg ggatcgcggt cccgccgggc cgccagggcc
     1561 ttgcagtagg gacagacggc caccatggtc ccgggccgga aggcgagggg ggcaccgcag
     1621 ctggggcagg aggcgagggg gctcatgggg gtccggtgat tatgcaggcc gctcagaggc
     1681 aggggaagat gcggagcagg ccgtcatgga aggttttttc cggtgtgagg aggctcagca
     1741 ccaggtgccc gtcccccggg aggtcgaaga aggagcccgg atgggccagc gtggcggtgt
     1801 cctcaagcag cctcagggcg caggcctcgt ccgcgtccac cgcgggacgc cgcaggagga
     1861 cggaccaccc gccttctacc ggcaggcggg tgaggtgggg gtggtgggcc agggcggcat
     1921 cgaggctccg gaggttggcc cgcaggcggg cctggacctg ctggcggatc gccggggcca
     1981 gcgccaggag cgtcgaagcg gcggcctgca cgggggcgga cacggacagg tactggtccg
     2041 ccaggaaggc cagggcctca agatgctccg ccgcgccggg gccccgcacg gcgatccacc
     2101 cgagcttcaa ctggggcagg gccgccacct tgctgaggcc cgacaggagg aagaccgggc
     2161 agggcggcga ggcgtcggcc agggccgtgg gcaggccgtc cgccgg
//
LOCUS       DASUDT010000302         4947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2179300, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000302 DASUDT010000000
VERSION     DASUDT010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2179300"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..498
                     /locus_tag="VFV26_06130"
     CDS             175..498
                     /locus_tag="VFV26_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845779.1"
                     /translation="MFVLRRLPALLALLMLGALSLRLGLPFLAALPLTLVALVLLFIP
                     KPALQVGLAVVLGCGSLAWVGMAWLRVNERLAAAQPWTRLALIFGGVTLFTAWAAWLI
                     RPEKD"
     gene            complement(937..1848)
                     /locus_tag="VFV26_06135"
     CDS             complement(937..1848)
                     /locus_tag="VFV26_06135"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002133.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase"
                     /protein_id="HEX4845780.1"
                     /translation="MDLQALLDDLAAEAAPFAAQGKVADYIPALAAVDPSRFGIALAT
                     VDGQLLGSGDWREPFSIQSVSKAFALALVLARDGEALWRRVGREPSGNPFNSLVQLEY
                     EKGIPRNPFINAGALILIDRLLSLTGDSLGTLRDFLRAESGNPGVDVDAGVAASEAGH
                     GHRNAALAHFMASCGNLENPVERVLDHYFRQCSLAMSCADLARAGLFLANHGLRADGS
                     RLLTRSEAKRINSIMLTCGTYDAAGDFAYRVGLPGKSGVGGGILAVLPGRGVLCVWSP
                     ALDPHGNSIAGVEALDRFTTRTGWSVF"
     gene            1964..2467
                     /locus_tag="VFV26_06140"
     CDS             1964..2467
                     /locus_tag="VFV26_06140"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX4845781.1"
                     /translation="MTPLAADLLPIFRRDLRCLMREVALFPDDASLWRTLPGLANSAG
                     NVALHVAGNLQHFVGAVLGATGYARQREREFTQREGSRASVIAELEAALTAVEAGLAA
                     LTPDVQAAPFPAPVGAHRPATGIFLVHLATHLAFHLGQAGYLRRALTGDAASAGGMSL
                     AELLETP"
     gene            2464..2988
                     /locus_tag="VFV26_06145"
     CDS             2464..2988
                     /locus_tag="VFV26_06145"
                     /inference="COORDINATES: protein motif:HMM:NF025227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4199 domain-containing protein"
                     /protein_id="HEX4845782.1"
                     /translation="MNDRTATDPIPASEEALLVPLRAGALLGVLVALWTFVMGFTGWY
                     RHPSLLFLFWLVIPLQILVLVLTLRKTAPTAGYLRQVQNGVGASVIASIIIFASSLLF
                     TMVVFPSYFAELEALGRLQMAKQGLSPEQIEAVVKAQAPMQKPLGSAFAGALGTWITG
                     LFTSLIAAAWLRKR"
     gene            complement(2990..3457)
                     /locus_tag="VFV26_06150"
     CDS             complement(2990..3457)
                     /locus_tag="VFV26_06150"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX4845783.1"
                     /translation="MSGEQQEPAWALTVAAIIEREGRFLFVEETDGASPDRVLNQPAG
                     HVEPGEGLLEAVRREVREETGLAFTPEALVGLYQLQARNGRDYCRVCFRGTVPAGAEA
                     VPEDPEILGCRWLTRAELAATPLRSGLVLQCLDDALAGAAHPLSLVEAVRRER"
     gene            3664..4542
                     /locus_tag="VFV26_06155"
     CDS             3664..4542
                     /locus_tag="VFV26_06155"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX4845784.1"
                     /translation="MLHRTALCVGINQYQNFPSATLNGCVNDAHNMASLLKDLLGFED
                     SDITRLTDQTATKTNIMRELRRMVEGALAGRYNHLVFSFSGHGTQVPDLNLDEFDRAD
                     EAFCPHDLAQSGAQWDRDHLIVDDELHDLFVQLPPTVILEVFLDTCHSGAGLRAADLL
                     MDRKPRYLPPPTVDAFRDIEYRRARPAHIKLLEKGLSHHILWTACKDSQTAADAFLQG
                     DWHGAFTWHFCREALASGNHLSRAKVLAKVRQDLSTAHFTQTPQLDCEAVTRHAVLKA
                     IEVPPNVMPLPTEMPS"
     gene            complement(4626..>4947)
                     /locus_tag="VFV26_06160"
     CDS             complement(4626..>4947)
                     /locus_tag="VFV26_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX4845785.1"
                     /translation="SEGKPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTLAQI
                     ELWTKKADYPVGVYTLPKHLDEQVARLQLQTLNAKLTALRPDQAKYIGVPLEGPYKTD
                     HYRY"
BASE COUNT          735 a         1805 c         1608 g          799 t
ORIGIN      
        1 tctacgggga gccctggtcc cgcctggcgg gcatcctggc gggcgtcacc ctgttcaccg
       61 cctgggccgc ctggctggtg tgggacagcc ggaaggcgga ccggcaccgg cccggggcgt
      121 ccgcaggatc ccgccgcccc gatccctccg ccgtctagcg ccgaggacct tcccatgttc
      181 gtcctccgcc gcctgcccgc cctcctcgcc ctgctgatgc tgggcgccct ttccctgcgc
      241 ctgggcctgc ccttcctggc ggccctgccc ctgaccttgg tggccctggt cctgctcttc
      301 atcccgaagc ctgcgctgca agtcgggctc gccgtggtgc tcgggtgcgg cagcctcgcc
      361 tgggtgggca tggcctggct gcgcgtgaac gagcgcctgg ccgcggccca accctggaca
      421 cgtctggccc tgatcttcgg cggcgtgacg ctcttcaccg cctgggcggc atggctgata
      481 cggccggaaa aggactgatt tctccacaga ttccacagat ccacacagat tccaaacatg
      541 cccagtcacg aaatctgtgc cgtctatgga atctgtggat aaagctcttc ccgattatcg
      601 accacactca gccctgaaag cattcagccg cagatgtcgc cgaaaaggct gtgaatccac
      661 agatttcacc gattcacaca gattcaatgc gcaaagcgcg aggctgttct ggctggcccg
      721 tcgcgggcat gggctctcgt gtgggcgccg gggtcgcgct ttttttggat gcgcggcacc
      781 ggcacccacg cgaacctccg gcagggccgg aggccgcctt cggcgggccc atgccggttg
      841 ggtcggcgcc catctgtgaa atctgtgtca tctgtggttt cagtttttga tcttgaaagg
      901 ggtggctgag cctctccgat aaccaggaag ctcttttcag aacaccgacc agcccgtgcg
      961 ggtggtgaag cggtccaggg cctcgactcc cgcgatgctg ttgccgtggg gatccagggc
     1021 ggggctccac acgcagagga cgccgcgccc gggcagcacc gccaggatgc cgccgcccac
     1081 gccgctcttg cccggcaggc ccacgcggta ggcgaagtcc ccggcggcgt cgtaggtgcc
     1141 gcaggtgagc atgatcgagt tgatgcgctt ggcctcgctg cgggtgagca ggcggctgcc
     1201 gtccgcccgc aggccgtggt tggccaggaa gagccccgcc cgggccaggt ccgcacagct
     1261 catggccagg gagcactggc ggaagtagtg gtccagcacc cgctccacgg ggttctccag
     1321 gttgccgcag ctggccatga agtgggccag ggccgcgttg cggtggccgt ggcccgcctc
     1381 ggaggcggcc accccggcat ccacgtccac gcccgggttg ccgctttcgg cccgcaggaa
     1441 gtcccgcagg gtgcccaggg agtcccccgt gagggagagc agccggtcga tgaggatgag
     1501 ggccccggcg ttgatgaagg ggttccgcgg gatgcccttc tcgtattcca gctgcaccag
     1561 cgaattgaag gggttgcccg agggctcccg gcccacgcgc cgccacaggg cctcgccgtc
     1621 ccgggccagc accagggcca gtgcgaaggc cttggacacg ctctggatgg agaagggctc
     1681 ccgccagtcc ccgctgccga ggagctgccc gtccaccgtg gccagggcga tgccgaagcg
     1741 ggacggatcc accgccgcca gcgccgggat gtagtccgcc accttcccct gcgccgcgaa
     1801 gggcgcggct tccgccgcca agtcgtcgag gagggcctgc agatccatga aaggcagaat
     1861 aagccacaga tggacacaga tgaactcaga tgaggcgcga cccaccccat ccgtgttcat
     1921 ctgtgttcat ccgtggtcga tctttccttc tccgggagcg cccatgaccc ccctcgccgc
     1981 cgacctgctg cccatcttcc gccgcgacct gcgctgcctc atgcgcgagg tggccctgtt
     2041 tcccgatgac gcaagcctgt ggcgcaccct gccgggcctc gccaacagcg ccggcaacgt
     2101 ggccctgcac gtggcgggca acctccagca ctttgtgggt gccgttctgg gcgccacggg
     2161 ctacgcgcgg cagcgcgagc gcgaattcac ccagcgggaa ggcagccgcg cctcggtgat
     2221 cgctgaactg gaggccgccc tgaccgcggt ggaggcgggc ctggcggccc tcacccccga
     2281 cgtccaggcc gcccccttcc ccgcgcccgt gggggcccac cggcccgcca cggggatctt
     2341 cctcgtgcac ctggccacgc acctggcctt ccacctgggc caggcgggct acctgcgccg
     2401 ggccctcacg ggcgatgccg ccagcgccgg gggcatgtcc ctggccgaac tcctggagac
     2461 cccatgaacg accgcaccgc gaccgatccc atccccgcct ccgaagaggc cctgctggtg
     2521 cccctgcggg ccggggccct cctgggcgtc ctggtggccc tgtggacctt cgtcatgggc
     2581 ttcacaggct ggtaccgcca ccccagcctg ctcttcctct tctggctggt gatccccctc
     2641 cagatcctcg tgctggtgct gacgctccgc aagacggccc ccacggcggg ctacctgcgc
     2701 caggtgcaga atggcgtggg cgcctcggtc atcgcctcca tcatcatctt cgccagcagc
     2761 ctgctcttca ccatggtggt gttccccagc tacttcgcag aactggaggc cctgggccgc
     2821 ctccagatgg cgaagcaggg cctcagcccc gaacagatcg aggccgtggt gaaggcccag
     2881 gcccccatgc agaagcccct cggcagcgcc ttcgcgggtg ccctgggcac ctggatcacg
     2941 ggcttgttca cgtcgctcat cgccgccgcg tggctgcgga aacgataggt cagcgctctc
     3001 gccggacggc ttccaccagt gacaggggat gggccgcccc ggccagggcg tcgtccaggc
     3061 actgcagcac caggcccgag cgcaggggcg tggcggccag ttcggcgcgg gtgagccagc
     3121 ggcagccgag gatctccgga tcctccggaa cggcttcggc accggcgggc acggtgccgc
     3181 ggaaacagac gcggcagtag tccctcccgt tgcgggcctg cagctggtag aggcccacca
     3241 gggcctccgg cgtgaaggcc aggcccgtct cctcgcgcac ctcgcggcgc acggcctcca
     3301 gcagaccttc gccgggctcc acatgacccg cgggctggtt gaggacgcgg tcaggcgagg
     3361 cgccatccgt ctcctccacg aagaggaagc ggccttcgcg ctcgatgatg gccgcgacgg
     3421 tgagggccca ggccggttcc tgctgttcgc cgctcatggg actccgccgc aatgggcttc
     3481 catgatgccc caaaacgcgc cgggcgcttg atccggcgct gccggggcct atcgtgggaa
     3541 ctggagccct ccgggatgtg cgcggaatgc cgcagtcctc ctccgatccg gccgggatcg
     3601 ctcgttccta cgacgagtcc gtgcggctcg tctccctgaa ccccgcgcaa ggaggaggct
     3661 cccatgctgc atcgcaccgc gctttgcgtc gggatcaacc agtaccagaa cttcccttca
     3721 gccaccctga acgggtgcgt caacgacgcc cacaacatgg cgtcgctgct gaaggatctc
     3781 ctgggcttcg aggattccga catcacccgg ctgacagacc agaccgccac gaaaaccaac
     3841 atcatgcgcg agctgcggcg catggtggaa ggcgccctgg cgggccggta caaccacctg
     3901 gtcttcagct tctccggcca cggcacccag gtgccggacc tcaacctcga cgaattcgac
     3961 cgggccgacg aggccttctg cccccacgat ctggcccaga gcggagccca gtgggaccgc
     4021 gaccacctca tcgtggacga cgagctgcac gacctgttcg tgcagctgcc cccgaccgtg
     4081 atcctggagg tgttcctgga cacctgccac agcggcgcgg gcctgcgggc cgcggacctg
     4141 ctcatggacc gcaagccccg ctacctgccg ccgcccaccg tcgacgcctt ccgggacatc
     4201 gagtaccgcc gggcccgtcc cgcccacatc aagctcctgg agaaggggct gtcccaccac
     4261 atcctctgga ccgcctgcaa ggacagccag accgccgcgg acgccttcct ccagggggac
     4321 tggcacggcg ccttcacctg gcacttctgc cgggaggccc tggccagcgg caaccacctc
     4381 tcccgcgcca aggtgctggc caaggtgcgg caggacctca gcaccgccca cttcacccag
     4441 accccccagc tggactgcga ggccgtcacc cgccacgccg tgctgaaggc catcgaagtg
     4501 ccgccgaatg tcatgcccct gcccacggag atgccgagct gagggttgag cgtggttcca
     4561 ccaggcctac agacaagcac ggcgcctcgc ggcgccgtgc tatctgaaac gcgcagcgtt
     4621 tcagcctagt agcggtagtg gtccgtcttg tacggccctt caagcggcac gccgatgtac
     4681 ttggcctggt cgggccgcag ggccgtcagc ttcgcgttca gggtctgcag ctggagccgc
     4741 gccacctgct cgtccaggtg cttgggcagg gtgtagacgc ccacgggata gtcggccttc
     4801 ttcgtccaca gctcgatctg ggccagggtc tggttggcga aactgctgct catcacgtag
     4861 ctggggtggc cggtgccgca gcccaggttc accaggcggc ccttggccag caggatgatg
     4921 cgcttgccat ccggcttgcc ctcgcta
//
LOCUS       DASUDT010000303         5563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1118829, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000303 DASUDT010000000
VERSION     DASUDT010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5563
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118829"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /gene="raiA"
                     /locus_tag="VFV26_06165"
     CDS             complement(<1..287)
                     /gene="raiA"
                     /locus_tag="VFV26_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEX4845786.1"
                     /translation="MKVHYTGRHVELTEPLKQFTKERLDKMATYLDDIIDVHVILSVE
                     KHRHEAEITLKTRASAFVASATTDDMYGSITQAIEKLDVQAHKLQDKRHSRP"
     gene            complement(358..1923)
                     /gene="rpoN"
                     /locus_tag="VFV26_06170"
     CDS             complement(358..1923)
                     /gene="rpoN"
                     /locus_tag="VFV26_06170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX4845787.1"
                     /translation="MAGPFLSQRLAQSQTLALTPAMQLKLKLWQMNLQELSQTVEREL
                     EENPLLELAEDGDEVPTLEALEEGRESDVTEGSADQTADGVELPEGVDTVDLGPMLDA
                     AGEMNPEGDLEKFTEEGVAQVQETELGAENSWDTDLPRTSNLPEEDRLSWEDRLSAYE
                     SLQDHLLGQLYETLEHGDPRALIVERLIDRLDPKGFLRMDPDQPSVEATSAALAADFG
                     ITEEALRAALDVLQEFDPSGVGCFTVQESLLLQLRHAGAEPDDLAVRIIQDHSALLSQ
                     RESAKLRRALGCTEEELSLAMEQLKHLNPSPGRAFDPDGERVVKPDVVVLKGEDGNWK
                     IYLNDEGLPRLKVNGDYQRFLASSDAKADKDFIRERFRSARDFIRGVEDRNRTVLRVS
                     AQIVDLQKEFLEHGIERLRPMVLRDVAEATGFHESTISRVVKAKTIHTPQGLYDLNYF
                     FSARPKDSDVSATVVKHRIKAFVQAEDPAKPLSDEAIAGLLERDGIKVARRTVNKYRE
                     ELKIPPASQRRRR"
     gene            complement(1923..2660)
                     /gene="lptB"
                     /locus_tag="VFV26_06175"
     CDS             complement(1923..2660)
                     /gene="lptB"
                     /locus_tag="VFV26_06175"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX4845788.1"
                     /translation="MTEPTPCLEAVNLQKRYGDRTVVRDVSLCVGTGEVVGLLGPNGA
                     GKTTTFYMVVGVEAPDQGSIRWLGQDVTALPMHRRARLGIGYLAQESSVFRGLTVWEN
                     LMALGELQPIPKDEQKARCERLLADFHLDKVRDTLGMSLSGGERRRCELARALVTEPR
                     IMLLDEPFAGVDPKSVLEIQGLIGNLKARGIGVLITDPNVRETLQIADRAYILADGMI
                     MKHGLPSEIAEDPDIRRVYLGDRFRLD"
     gene            complement(2734..>5563)
                     /locus_tag="VFV26_06180"
     CDS             complement(2734..>5563)
                     /locus_tag="VFV26_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845789.1"
                     /translation="SEHIAKILVDPRDSRVVFVASQGPLWKEGGERGLYRTTDGGKTW
                     KAVLTVDAHTGVTDVLMDPRNPDVLYAATYQRRRHVWGMVNGGPGAGIHKSLDGGQTW
                     TKLTEGLPKEDMGRIGLAIPAGEPDTVYATIEAANKAGGFFRSLDGGRTWERRNEQVS
                     GSAQYYQELFCDPKDPKRVYSMDTWMQVTEDGGKTWRRVGETSKHVDNHALWIDPANS
                     DHLISGCDGGVYESRDRGATWEFKANLPVIQYYRVAVDNAKPFYTIYGGTQDNFSMGG
                     PSRTRNLHGSTNYDWFVTQGGDGFYSQVDPDDPNTVYSESQYGGLARFDRRTGERVEI
                     QPQPAPGEEPFRWNWDSPLMLSPHNGKRLYFAAQKLFRSDDRGDSWTAVSPDLTRKID
                     RSRLKIMDKVWGVDAVARNASTSFYGNIVAFTESPRAEGLLYVGTDDGLLQVSEDGGK
                     AWRKVERFPGVPDLTYVASLEASPHRADTLYAAFNNHKNGDFRPYLLRSKDRGRTWES
                     LAAGLPERGSIYTLREDPAREGLLYCGTEFGLFFSLDAGKSWSKFTGLPTIAVKDLAI
                     QAREGDLVVATFGRGFYVLDDLTPLREAKPEHLEADAHLFGLRPALAYIQAVPFGGPG
                     KSFQGDALYLAPNPPFGAVFTYHVKAEPKTLKKQRQAREKEAAKAGQDPVIPTWEALR
                     AEDREAAPAAVLTITAGDGQVVRRITGKPEKGLHRLAWDLRLQNPAPIRLKAPGERDP
                     WDYGAHGALAAPGRYQASLAFQVDGVLKPVAGPVSFDVKPLDADRLTPAQWAEYSAFC
                     TRMGEAQRQAMGASERLNDAQNRLDHVRKALLETPAADPAQLARARALHGDLKDLRDQ
                     LSGDRVIAARQEPTVPGILGRIQDVTGSVWSTTQLPTAMQRQNLAWAEEGLKALQGRF
                     DTALGALKALEDALEAAKAPHTPGRSTR"
BASE COUNT          751 a         1866 c         1946 g         1000 t
ORIGIN      
        1 gggcgggaat ggcgcttgtc ctgcagcttg tgcgcctgca cgtccagctt ttcgatggcc
       61 tgcgtgatgc ttccgtacat gtcgtccgtg gtggcggagg ccacgaaggc gctggcgcgg
      121 gtcttcagcg tgatctcagc ctcgtggcgg tgcttttcca cgctcaggat cacgtggacg
      181 tcgatgatgt cgtccaggta ggtggccatc ttgtccagcc gctccttggt gaactgcttc
      241 aggggctcgg tgagctccac gtggcggccg gtgtagtgga ccttcatggg acactcctga
      301 aaggggccgg gcggcccgta gatcgtggat ccggcacccg gagggggatc agccctgtta
      361 tcggcgccgg cgctgggaag ctggaggaat cttcagctcc tcccggtact tgttcacggt
      421 gcggcgggcg accttgatgc cgtcccgctc caggaggcct gcgatggcct cgtccgacag
      481 cggcttggca ggatcctcgg cctgcacgaa ggccttgatg cggtgcttga ccacggtggc
      541 cgacacatcg gagtccttgg gccgcgcgga gaagaagtag ttcaggtcgt agagcccctg
      601 gggcgtgtgg atggtcttgg ccttcaccac ccggctgatg gtgctttcgt ggaaacccgt
      661 ggcctcggct acgtcccgca gcaccatggg ccgcaggcgc tcgatgccgt gctccaggaa
      721 ctccttctgg agatccacga tctgggccga gacgcgcagc accgtgcggt tccggtcctc
      781 cacgccgcgg atgaagtccc gggcgctgcg gaagcgttcg cggatgaaat ccttgtccgc
      841 cttggcgtcg ctggaggcca ggaaccgctg gtagtcgccg ttcaccttga gccggggcag
      901 gccttcgtcg ttgaggtaga tcttccagtt gccgtcctcg cccttgagca ccaccacgtc
      961 gggcttcacc acgcgttcgc catcgggatc gaaggcccgg cccggcgagg ggttgaggtg
     1021 cttgagctgc tccatggcca gggacagttc ctcctcggtg cagcccaggg cgcggcgcag
     1081 cttggcgctt tcccgctggg acagcagcgc cgagtggtcc tggatgatgc gcacggccag
     1141 atcatcgggc tcagcgcccg catggcggag ctggagcagc aggctctcct gcaccgtgaa
     1201 gcagcccacg ccggaggggt cgaattcctg gaggacgtcc agggcggcgc gcagggcctc
     1261 ctcggtgatc ccgaagtccg ccgccagggc cgcggacgtg gcttccaccg agggttgatc
     1321 gggatccatg cgcaggaaac ccttcgggtc gaggcggtcg atgaggcgtt ccacgatcag
     1381 ggccctggga tccccatgct ccagcgtttc gtacagctgg cccagcaggt ggtcctggag
     1441 cgattcgtag gcactgagcc ggtcctccca ggagaggcgg tcctcttcgg gcaggttgct
     1501 ggtgcggggc agatccgtat cccagctgtt ctcggcgccc agctcggttt cctggacctg
     1561 ggccacccct tcttccgtga atttctccag atcgccttcg gggttcatct cacccgccgc
     1621 gtccagcatg ggtcccagat ccaccgtgtc caccccttcg ggcagttcca cgccatcggc
     1681 ggtctggtcg gcggagccct cggtcacatc ggattcgcga ccctcctcca gggcctccag
     1741 cgtcggcacc tcgtcgccgt cttccgccag ttccagcagg gggttctcct ccagctcgcg
     1801 ctcgacggtc tgcgacagtt cctgcaggtt catctgccac agcttgagct tcagctgcat
     1861 ggcgggggtg agcgcgaggg tctggctctg ggccaggcgc tgggagagga aggggccggc
     1921 catcaatcca acctgaaccg gtcgcccaga tagacccggc ggatgtccgg atcctctgcg
     1981 atctcgctgg gcaggccgtg tttcatgatc atcccgtccg ccaagatata ggccctgtcg
     2041 gcgatctgca aggtctcgcg gacgttgggg tcggtgatca gcaccccgat gcctcgcgcc
     2101 ttgaggttgc cgatgaggcc ctggatctcc agcacggact tggggtccac gccggcaaag
     2161 ggctcgtcca gcagcatgat gcgcggctcg gtcacgaggg cccgggccag ttcgcagcgc
     2221 cgccgttctc cgccggacag gctcatgccc agggtgtcac gcaccttgtc caggtggaag
     2281 tccgccagca ggcgctcgca gcgggccttc tgctcgtcct tgggaatggg ctgcagttcc
     2341 cccagggcca tgaggttctc ccagaccgtc agcccccgga acacgctgga ttcctgggcc
     2401 aggtagccga tgcccagccg cgcccggcgg tgcatgggca gggccgtcac atcctggccc
     2461 agccagcgga tgctgccctg gtccggcgcc tccaccccca ccaccatgta gaaggtcgtg
     2521 gtcttgccgg cgccgttggg acccagcagc cccaccacct cgcccgtgcc cacgcagagg
     2581 ctcacgtcgc gcaccacggt gcggtcgcca tagcgcttct ggaggttcac ggcctcgagg
     2641 cagggggtcg gctctgtcat agctctatca gaacatgatc gcccgcccct ttcgccgcgc
     2701 gccctgaatg gcgcgcggcg ggagcggccc gtgtcagcgg gtgctgcgcc cgggcgtatg
     2761 cggagccttg gcggcctcca gggcatcctc cagggccttg agcgccccca gggccgtgtc
     2821 gaagcggccc tgaagggcct tcagcccctc ctcggcccag gccaggttct ggcgctgcat
     2881 ggcggtgggc agctgggtgg tggaccagac gctgcccgtc acatcctgga tgcgcccgag
     2941 gatgccggga accgtgggtt cctgccgggc cgcgatgacg cggtcgccac tcaattgatc
     3001 gcgaaggtcc ttcaggtcgc cgtggagcgc ccgggccctg gccagctgcg cggggtccgc
     3061 cgccggggtc tccagcaggg ccttccgcac gtggtcgagg cggttctggg cgtcattcag
     3121 gcgctcggag gcccccatgg cctggcgctg ggcctcgccc atccgggtgc agaaggcgct
     3181 gtactcggcc cactgggcgg gcgtgagacg gtccgcgtcc aggggcttca cgtcgaagga
     3241 cacggggccc gccacgggct tcagcacgcc gtccacctgg aaggccaggc tggcctggta
     3301 gcggcccggg gcggccaggg ccccgtgggc gccgtaatcc cagggatccc gctcgccggg
     3361 ggccttcagg cggatggggg ccgggttctg gaggcggagg tcccaggcca ggcgatggag
     3421 gcccttctcc ggcttcccgg tgatgcgccg caccacctgg ccgtcacccg ccgtgatggt
     3481 cagcacggcg gcaggcgccg cctcccggtc ctcggcccgg agggcttccc aggtggggat
     3541 gacgggatcc tggccggcct tggcggcctc cttttcccgc gcctggcgct gcttcttcag
     3601 ggtcttgggc tcggccttca cgtggtaggt gaagacggcg ccgaaggggg gattgggggc
     3661 caggtagagg gcatcgccct ggaaggattt cccggggccg ccgaagggga cggcctggat
     3721 gtaggccagg gccggccgca ggccgaagag gtgggcatcc gcctccaggt gctccggctt
     3781 cgcctcgcgc agcggggtga ggtcatccag gacgtagaag ccgcggccga aggtggccac
     3841 caccaggtcg ccctcccggg cctggatggc caggtccttc acggcgatgg tgggcagccc
     3901 ggtgaacttc gaccagctct ttccggcatc caggctgaag aagaggccga attccgtgcc
     3961 gcagtagagc aggccctccc gggccggatc ttcgcgcagg gtgtagatgc tgccccgctc
     4021 cggcagcccc gcggccaggg attcccaggt gcgcccccgg tccttcgagc gcagcaggta
     4081 ggggcggaag tcgccgttct tgtggttgtt gaaggcggcg tagagcgtat ccgcccgatg
     4141 cgggctggcc tcgagggagg cgacataggt caggtcgggc acgccgggga agcgctcgac
     4201 cttgcgccag gccttgccgc catcctcgct cacctggagc aggccgtcgt cggtgcccac
     4261 gtagagcagg ccttcggccc tggggctttc cgtgaaggcc acgatgtttc cgtagaagct
     4321 ggtggaggcg ttgcgggcca cggcatccac cccccacacc ttgtccatga tcttcaggcg
     4381 gctgcggtcg atcttccgcg tcaggtcggg gctcacggcg gtccagctgt cgccgcggtc
     4441 gtcgctgcgg aagagtttct gcgcggcgaa gtagagccgc ttgccattgt gggggctgag
     4501 catcaacggc gaatcccagt tccagcggaa cggctcctcg ccgggcgcgg gctggggctg
     4561 gatctccacg cgctcgcccg tgcggcggtc gaagcgggcc aggccgccgt actggctttc
     4621 ggaatacacc gtgttcggat catccggatc cacctggctg tagaagccgt cgccgccctg
     4681 ggtcacgaac cagtcgtagt tggtggagcc gtgcaggttc cgcgtgcggc tggggccgcc
     4741 catggagaag ttgtcctggg tgccgccgta gatggtgtag aagggcttcg cattgtccac
     4801 ggccacccgg tagtactgga tgaccggcag gttggccttg aactcccagg tggcgccccg
     4861 gtcgcggctt tcgtacacgc cgccgtcgca tcccgagatc aggtggtcgc tgttggccgg
     4921 atcgatccac agggcgtggt tgtccacgtg cttggatgtc tcccccaccc gccgccaggt
     4981 cttgccgccg tcctcggtca cctgcatcca ggtgtccatg ctgtagacgc gcttcgggtc
     5041 cttcggatcg cagaagagct cctggtagta ctgggcgctg ccggacacct gctcgttgcg
     5101 ccgctcccag gtccggccgc catccagact gcggaagaag ccgccagcct tgttggcggc
     5161 ctcgatggtg gcgtagaccg tatccggctc gcccgccgga atggccaggc cgatgcggcc
     5221 catgtcctcc ttgggcaggc cctccgtgag cttggtccag gtctggccgc cgtccaggct
     5281 cttgtggatg cccgcgccgg ggccgccgtt caccatgccc cacacatggc gccgccgctg
     5341 gtaggtggcc gcgtacagca cgtcggggtt ccggggatcc atgagcacgt ccgtgacgcc
     5401 cgtgtgggca tccacggtga gcaccgcctt ccaggtcttg ccgccgtccg tggtcctgta
     5461 gaggccgcgc tcgccgccct ccttccacag cgggccctgg gaggccacga agaccacgcg
     5521 gctgtcgcgg ggatccacga ggatcttcgc gatgtgctca ctg
//
LOCUS       DASUDT010000304         2153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1030479, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000304 DASUDT010000000
VERSION     DASUDT010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1030479"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..965
                     /locus_tag="VFV26_06185"
     CDS             <1..965
                     /locus_tag="VFV26_06185"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4845790.1"
                     /translation="QRALADMEEAASHDRLTGAWNRRYFDEMVAAETSLARRRRAPLC
                     LILLDLDHFKRINDDYGHPAGDTVLAGAVTAFRSVLRASDALVRWGGEEFLVLSPATS
                     LEGALRLAERLRAALEATAFPAARPVTLSAGVAEYQEDESVAAWVERADKALYQAKAL
                     GRNQVAASPGRADGAATPGSSLLELVWEEAYGSGHRLIDEQHILLFDLSNALFSALME
                     GRPAPDIEERLDALLIHAEKHFRDEERLLERAGYPNLPEHRGIHAGLVATARHLQEDL
                     KSGRVDFGKLVSYLATDLVKGHLLTEDRNYFSHLVKVQGPASRP"
     gene            complement(954..2057)
                     /locus_tag="VFV26_06190"
     CDS             complement(954..2057)
                     /locus_tag="VFV26_06190"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HEX4845791.1"
                     /translation="MGWMGRVAVGLVMVVPVQAQEADLALTDAAADRFAALALKCVRQ
                     EYPNKLDHVMNGAGEVQSPKALHPAFYGCFDWHSSVHGHWMLVRLLRTRPGMAKAAAI
                     RAALDENLAPERIAAEVAYLDQPNRRSFERTYGWAWLLKLAAELKTWDAPEARRWSAA
                     LEPLALRIAAAYRDFLPKQTYPIRTGVHPNSAFGLDLALDYARAAGDTKLEAAVLERA
                     GAWFGQDRRGPLAWEPGGEDFLSPCLEEAALMARLLPRDRFHRWLDGFLPGLPGPLAP
                     ATVSDRTDPKIVHLDGLNLSRARALYALAGTFGAKDPRRAALIRSADRHARASLPHLA
                     SGSYEGEHWLATFAVRMLEARAEGLTNPRRSGP"
BASE COUNT          316 a          779 c          756 g          302 t
ORIGIN      
        1 tgcagcgcgc cctcgcggac atggaggaag ccgccagcca tgaccgcctc accggggcct
       61 ggaaccggcg ctacttcgat gagatggtgg ccgccgagac gagcctggcc cgccgccgcc
      121 gggcccccct gtgcctcatc ctgctggacc tcgaccactt caagcggatc aacgatgact
      181 acggccaccc ggcgggagac acggtgctcg ccggggcagt gacggccttc cggtccgtac
      241 tccgcgcatc ggatgccctg gtgcgctggg gcggcgagga attcctggtc ctttcgccgg
      301 ccaccagcct ggagggggcc ctccggctcg cggagcgtct gcgggccgcg ctggaggcca
      361 cggcctttcc cgccgccagg cccgtcaccc tcagcgccgg ggtggcggaa taccaggagg
      421 acgaatccgt ggccgcctgg gtggagcggg cggacaaggc gctctaccag gccaaggccc
      481 tggggcggaa ccaggtggcc gccagccccg ggcgcgccga tggcgccgcc accccgggct
      541 ccagcctcct cgaactggtg tgggaggagg cctatggcag cggccaccgc ctcatcgacg
      601 aacagcacat cctgttgttc gacctttcga acgccctctt ttccgcgctc atggagggcc
      661 ggcccgcccc ggacatcgag gagcggctgg atgccctcct gatccatgcc gagaagcatt
      721 tccgcgacga ggagcgcctg ctggagcggg ccggctatcc gaatctcccc gagcaccggg
      781 ggatccatgc cggtctcgtg gccacggccc gccacctcca ggaggacctg aagtcgggcc
      841 gggtggattt cgggaagctg gtgtcctacc tcgccacgga cctcgtcaag ggccacctcc
      901 tcaccgagga ccggaactac ttcagccacc tggtgaaggt ccagggcccg gcgtcacggc
      961 cctgagcgcc ggggatttgt caggccctct gcgcgcgcct ccagcatccg cacggcgaag
     1021 gtggcgagcc agtgctcgcc ctcatagctg ccggaggcca ggtgcggcag cgaggcccgg
     1081 gcgtggcggt cggcggagcg gatcagggcc gcgcggcggg gatccttcgc gccgaaggtc
     1141 ccggccaggg cgtagagcgc ccgggcccgg ctcaggttca ggccgtcgag gtggacgatc
     1201 ttgggatccg tgcgatccga aacggtggcc ggggccaggg gcccaggcag ccccggcagg
     1261 aatccgtcca gccaccggtg gaagcggtcc cggggcagca gccgggccat gagggccgcc
     1321 tcctccaggc agggcgacag gaaatcctct ccgcccggct cccaggccag ggggccccgg
     1381 cggtcctggc cgaaccaggc gccggcccgt tccagcaccg ccgcctccag cttcgtgtct
     1441 ccggcggccc gggcgtagtc cagcgccaga tccaggccga aggccgagtt gggatgcacg
     1501 ccggtacgga tggggtaggt ctgcttcggc aggaagtccc ggtaggccgc ggcgatcctc
     1561 agggccagag gctccagggc cgcggaccag cgccgggctt cgggcgcgtc ccaggtcttc
     1621 agctccgccg ccagcttgag gagccaggcc cagccgtagg tgcgttcgaa gctccgccgg
     1681 ttgggctggt ccaggtaggc cacctccgcg gcgatgcgct ccggcgccag gttctcgtcc
     1741 agcgccgcgc ggatggccgc cgccttcgcc atgcccgggc gcgtgcgcag caggcgcacc
     1801 agcatccagt ggccatgcac cgaggagtgc cagtcgaaac agccgtagaa ggccggatgg
     1861 agggccttcg gggactgcac ctcccctgcc ccgttcatca cgtgatccag cttgttgggg
     1921 tattcctgcc gcacgcactt cagcgccagc gccgcgaaac ggtccgccgc cgcgtccgtc
     1981 agcgccaggt ccgcctcctg ggcctggact ggcaccacca tcaccaaccc cacggccacc
     2041 cgccccatcc agcccatagg atcctccggg ctggattcta tcggctggtt tgctagaatg
     2101 ggcgtcccgg agagatggcc gagtggttga tggcaccgca ctcgaaatgc gga
//
LOCUS       DASUDT010000305         4059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_522727, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000305 DASUDT010000000
VERSION     DASUDT010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522727"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            143..499
                     /locus_tag="VFV26_06195"
     CDS             143..499
                     /locus_tag="VFV26_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845792.1"
                     /translation="MKVLFPLLLGVTLALPAQVPSKADLKGVADATVDKGKAKADAKA
                     DQAKAKGDEKASGAKAKVDAKAGAVPMAGDQVKAATAKGEGAAKAGADKAKAKSKKGT
                     TKGADKAKTVAEKAVK"
     gene            complement(560..1417)
                     /locus_tag="VFV26_06200"
     CDS             complement(560..1417)
                     /locus_tag="VFV26_06200"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4845793.1"
                     /translation="MSESEAKNLQTYISGPLRLAVLKRDPVPAKLLPARDAWTLLQPT
                     HAVRVCTSEDREEGVIRSGDLALLLPGFGHTLKRHHPNSPFGFTALFMEGPFPEPLLS
                     SLQNPPRKWQESSFAVLRSLSLKQLFSIFSQELANPDGVQLMTRELFLILLGAELARL
                     TEKEDRGRFPYRLNRSTLQLVLDHMEVHIGAKNSVPELATMARCTPDHFIRLFREATS
                     TTPHQYLIERRLQRAVTLLANGERPSDVAKILGFYDASAFTRAFKRRFGVPPSEYAQE
                     AYDRQFPKK"
     gene            complement(1524..2222)
                     /gene="purQ"
                     /locus_tag="VFV26_06205"
     CDS             complement(1524..2222)
                     /gene="purQ"
                     /locus_tag="VFV26_06205"
                     /inference="COORDINATES: protein motif:HMM:NF002957.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX4845794.1"
                     /translation="MRVAVPVFPGSNCDHDALHACGTVMGWDTIPVWHQESRLPENTD
                     LVFVPGGFSYGDYLRCGAIAALAPIMADVKRHADNGGLVLGVCNGFQILCEAQLLPGA
                     LLRNESLRFIHADVHLRVERADLPFTRAMKAGEVFRVPIAHAEGNFTLDPADLADLEA
                     RGGVAFRYCSDRGEIGADHVPNGAMNGIAGIVNIRGNVLGMMPHPERAVDPKLGPTGG
                     LGVFRSLVEAFARA"
     gene            complement(2222..2458)
                     /gene="purS"
                     /locus_tag="VFV26_06210"
     CDS             complement(2222..2458)
                     /gene="purS"
                     /locus_tag="VFV26_06210"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEX4845795.1"
                     /translation="MKVRVSVQLKPGILDPQGKAVEQGLHGFGFAVEHVRIGRLIEMD
                     VPGTDAADVKAKALAMCEKLLVNPVMEKASIEVL"
     gene            complement(2589..2972)
                     /locus_tag="VFV26_06215"
     CDS             complement(2589..2972)
                     /locus_tag="VFV26_06215"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HEX4845796.1"
                     /translation="MPKPRPARRIEPPTPTRDFRAEVMAVVARIPEGRLASYGQVALL
                     AGFPQRPRQVGMVLSGLPEGTDLPWHRVVNTRGYVPSRGRWWGAFEQIGRLRDEGIEV
                     DDLGNLDLEAHRWQPDTTETRRTRR"
     gene            complement(2977..3339)
                     /locus_tag="VFV26_06220"
     CDS             complement(2977..3339)
                     /locus_tag="VFV26_06220"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HEX4845797.1"
                     /translation="MGRIFTLDEARALMPQVKSVTEPVYTLAASLAEELSQAEDAKDE
                     TRAEELRDRLQLLVRTWQQSMQDLEADVKGLWLVDFDSGDGYWCWAYPEESLDHWHSY
                     EGGFRSRVPADQRPGVQA"
     gene            3368..4054
                     /locus_tag="VFV26_06225"
     CDS             3368..4054
                     /locus_tag="VFV26_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845798.1"
                     /translation="MRFVPLIPSSSDPAPWSPLAPLVLRWTGDLHAGWTPALRRTLAV
                     HAIQLPGQAPVEEGLEALHHGLSPDFLIFPATLPATREAGFRLLGHLEALLEATSGRG
                     VKLALQVEGGAEAAVVELLRQARAEAVGFCWHPGTADAEALADRLWCGFCEAGSDLRG
                     LQRLGYRWDMALAAEDPARYGAQAAALEAAHPPVLFPAEMPATALGRPVVPDDSVVFG
                     RHLEREGGHA"
BASE COUNT          636 a         1349 c         1435 g          639 t
ORIGIN      
        1 ggagcgaggg cacgctcctc cggctgggct tcgccttcga gaaggccggc ggcgcacgcc
       61 aggctcccgg gttcaggcct tccgcccgtt gacagccccc tccccaggac ggaccctggc
      121 ctcactgcta ccggaggctc ccatgaaggt gctctttcct ctcctgctgg gcgtgaccct
      181 ggcccttccg gcccaggtcc cgtcgaaggc cgatctcaag ggcgtcgcgg atgccaccgt
      241 ggacaagggc aaggccaagg cggacgccaa ggccgatcag gccaaggcca agggcgatga
      301 aaaggcctcg ggcgccaagg ccaaagtgga tgccaaggct ggcgcggtcc ccatggctgg
      361 cgatcaggtg aaggccgcta cggccaaggg cgagggtgcc gccaaggccg gcgctgacaa
      421 ggccaaggcc aagtcgaaga agggcaccac caagggtgcc gacaaggcca agaccgtggc
      481 tgagaaagcc gtcaaatagg ttgttcctca cgcagaaaaa gggcgccaac cggcgccctt
      541 tttctgcgta tgggaaagcc tacttcttgg ggaactgccg gtcgtaggct tcctgggcgt
      601 attcgctggg ggggacgccg aagcggcgct tgaaggcgcg ggtgaaggcg ctggcatcgt
      661 agaagcccag gatcttcgcc acgtcgctgg ggcgctcgcc gttggccagc agcgtcacgg
      721 cccgctggag gcggcgctcg atgaggtact ggtggggcgt ggtgctggtg gcttcgcgga
      781 agaggcggat gaagtggtcc ggcgtgcagc gggccatggt ggccagctcg ggcacgctgt
      841 tcttggcgcc gatgtggact tccatgtgat ccagcaccag ctgcagggtg gagcggttca
      901 ggcggtaggg gaagcggccc cggtcctcct tctccgtcag gcgggccagc tcggcgccca
      961 gcaggatgag gaagagctcc cgggtcatga gctgcacgcc atcgggattc gccagttcct
     1021 ggctgaagat gctgaagagc tgcttgaggc tcaggctgcg cagcacggcg aagctggact
     1081 cctgccactt gcggggcggg ttctgcagcg aggacagcag cggctcgggg aaggggcctt
     1141 ccatgaacag cgccgtgaag ccgaaggggc tgttggggtg gtgccgcttc agcgtgtggc
     1201 cgaagcccgg cagcagcagg gccaggtcgc cggagcggat gacgccctct tcgcgatcct
     1261 cgctggtgca gacgcgcact gcatgcgtgg gctggagcag cgtccacgca tcccgcgcgg
     1321 gcagcagctt cgcaggcacg ggatcgcgct tgagaacggc caggcggagg gggccgctga
     1381 tgtaggtctg gagattcttg gcttcagatt cgctcatagg ctcaggaaga aacagacatg
     1441 cccaccgggg cgtcccagga aggatgacag gaaatcttct tgaatgacct gtaattttca
     1501 caagatgcca agccacaccg tggtcaggct ctggcaaagg cctccaccag gctccggaac
     1561 acgcccaggc cccccgtggg gcccagcttg gggtccacgg cccgctcggg gtggggcatc
     1621 atgcccagca cattcccgcg gatgttcacg atgcctgcga tgccgttcat ggccccgttg
     1681 ggaacgtggt ccgcaccgat ctcgccccgg tcggagcaat agcggaaggc cacgccgccc
     1741 cgggcctcca gatccgccag atcggcggga tcgagggtga agttcccctc ggcatgggcg
     1801 atgggtaccc ggaacacctc gccggccttc atggcgcggg tgaagggcag atcggcccgc
     1861 tccacccgca ggtggacatc cgcgtggatg aagcgcaggg attcgttgcg cagcagggcc
     1921 ccgggcagca gctgggcctc gcagaggatc tggaagccgt tgcagacgcc cagcaccagg
     1981 ccgccgttgt cggcgtggcg cttcacgtcg gccatgatgg gggccagggc cgcgatggcg
     2041 ccgcagcgca ggtagtcgcc gtagctgaag ccgccgggca cgaagaccag gtcggtgttc
     2101 tccggcaggc ggctctcctg gtgccagacg gggatcgtgt cccagcccat cactgtgccg
     2161 caggcatgga gcgcgtcgtg atcgcagttg gagcccggga agaccggaac ggccacgcgc
     2221 atcacagcac ctcgatggag gccttctcca tcacgggatt gaccaggagt ttctcgcaca
     2281 tggccagggc cttggccttc acatcggcgg catcggtgcc cgggacgtcc atctcgatga
     2341 ggcggccgat gcgcacgtgc tccacggcga acccgaaacc gtgcagcccc tgctccaccg
     2401 ccttgccctg gggatcgaga atccccggct tcaactgcac cgacacgcga accttcatgg
     2461 agccctccgt gctccagttt acctgtaaag agccaccacg gaggcacgga gggcactgag
     2521 aagggcatcg agaaaagcac ggagaaacga aggagtggcg cgaatctctc cgcgggcttc
     2581 tccgtgttct acctccgcgt cctccgtgtc tccgtggtgt ccggttgcca ccggtgggcc
     2641 tccaggtcca ggttgcccag atcatccacc tcgatgccct cgtcgcgcag gcggccgatc
     2701 tgctcgaagg cgccccacca gcggccccgg ctgggcacgt agccgcgggt gttcaccacc
     2761 cggtgccagg gcaggtccgt gccctcgggc aggcccgaca gcaccatgcc cacctggcgc
     2821 gggcgctggg ggaagcctgc cagcagggcc acctggccgt aggaggccag ccgcccttca
     2881 gggatccgcg ccaccacggc catcacctcc gcccggaagt cccgggtggg cgtgggcggt
     2941 tcgatgcgcc tggcggggcg gggcttcggc attccgctag gcctgcacgc ccggccgctg
     3001 gtccgcgggc acgcgggagc ggaaaccgcc ctcgtagctg tgccagtggt cgagggattc
     3061 ctcgggatag gcccagcacc agtagccgtc gccggaatcg aaatccacga gccagaggcc
     3121 cttcacgtcg gcctccaggt cctgcatgct ctgctgccag gtccgcacga ggagctgcag
     3181 gcggtcacgc agctcctcgg cgcgggtctc gtccttggcg tcctccgcct ggctcagttc
     3241 ctcggccagg ctcgcggcga gtgtgtagac aggttctgtg acggacttca cctggggcat
     3301 gagggcccgc gcttcatcca gggtgaaaat gcggcccatg gtgcctccga tccctcatga
     3361 taaacccatg cggttcgtcc ccctgattcc gtccagttcc gaccctgcgc cctggtcccc
     3421 cctcgcgccc ctcgtgttgc ggtggaccgg ggacctgcat gcgggatgga cccccgccct
     3481 gcgccggacc ctcgcagtcc atgccatcca gctgccgggc caggcgcccg tggaggaagg
     3541 gctggaggct cttcatcacg gcctgagtcc tgatttcctc atttttcccg cgacccttcc
     3601 ggccacccgg gaggcgggct tccgcctgct gggccacctg gaggccctgc tggaggccac
     3661 cagtggccgg ggcgtgaagc tggcgctgca ggtcgagggc ggggccgagg ccgccgtggt
     3721 ggagctgttg cggcaggccc gggccgaggc cgtgggcttc tgctggcatc cgggcaccgc
     3781 cgatgcggaa gccctggcgg accgcctctg gtgcggcttc tgcgaggcgg gttcggatct
     3841 gcggggcctc cagaggctgg gctatcgctg ggacatggcc ctggccgcgg aggatcctgc
     3901 ccgctatggc gcgcaagccg cggcgctgga ggcggcccat cccccggtgc tcttcccggc
     3961 ggagatgccc gccaccgccc tgggccgccc ggtggtgccc gacgacagcg tggtgttcgg
     4021 ccggcacctg gagcgtgagg ggggccacgc gtgacccag
//
LOCUS       DASUDT010000306         6242 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1097144, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000306 DASUDT010000000
VERSION     DASUDT010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6242
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097144"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..758
                     /locus_tag="VFV26_06230"
     CDS             297..758
                     /locus_tag="VFV26_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HSP20 family small heat-shock protein"
                     /protein_id="HEX4845799.1"
                     /translation="MTILRTRNPQTLPATAASLEPFRLMRDFLRWDPLRDYDLGAPAA
                     AFMPSFDVKESPDAYQFRADLPGILEADLEISLEGTRLTVAGKRDDETLKDGERVHLS
                     ERSHGRFSRTFTLPEDVEGEKVVAELRNGVLTLMVPKRPEVRPRKINVSLG"
     gene            complement(805..2040)
                     /locus_tag="VFV26_06235"
     CDS             complement(805..2040)
                     /locus_tag="VFV26_06235"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEX4845800.1"
                     /translation="MRPRVSLSLGTLGILALLGCSGTDYVYGPSSSYLVNAIAVADID
                     ANGQSDILGLVSTDFGGAPTQGYVSTRLQGPAGSFAMPTRFGVGMEPANLVVSDVNAD
                     GRPDLVVVNTHDRSVSVRLADPARPGFFLPATVLPTTGSIPLDVAVGDVNGDGLVDIV
                     VAAYPEVTAAVVPPPPPVVTVFRQVVPTVPTPNQVTFGPATTYTIGGQPQAVTVADLD
                     GNGFADIAVATTANTVSVLLQTSAGVFASAVDYSTGVQPVAIKAADINGDGKPDLLTA
                     NYGAALSPDSQGLSVLLQGTAGAFLPPVHYTTGYRSAALAVGDLNGDGKVDVAVANAG
                     LPGDPGSVSVLLQDSATAGTLLAPTNYLGAWGPMGVAFGDMDGDGHPDLVLADGDIVV
                     RLNNPAAPGTFGPRQYFYN"
     gene            complement(2103..3461)
                     /locus_tag="VFV26_06240"
     CDS             complement(2103..3461)
                     /locus_tag="VFV26_06240"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX4845801.1"
                     /translation="MSKLVRIANGQGFWGDSIDAPVRLVEAGGIDYLTLDYLAEVTLS
                     IMQKQRRKDPQLGYATDFVDLMKRVLPQLKAKGIRVVANAGGVNPEACRAAVLEVARK
                     LGVKGLKVATVTGDDVLARLPEFQAQGLKLANMDTGEGLFDAPREILSANVYLQTQAM
                     VEALDTGADIVLTGRCTDPGLTLAPLIHEFKWAADDWNRLAAGTVAGHILECGAQSTG
                     GNFTRWWEVPDLWNVGYPIAECSEDGTFVITKHAGTGGMVTVDTVSEQLVYEMGDPEN
                     YITPDVVAEFTSIHLEQAGPDRVRVSGITGKPRTPFLKVSGAYLRGYKATGQLTLCGP
                     RALEKAQLCADIVWKRLKAAGFEYEHTDAEFLGASTVHAGMAPAPADPAEIVLRLSVK
                     DSDRKKVERFGREIAPLVTAGPAGVTGFAGGRPKAQEIVAYWPALLPRELVTWQVSVE
                     SV"
     gene            complement(3492..4718)
                     /locus_tag="VFV26_06245"
     CDS             complement(3492..4718)
                     /locus_tag="VFV26_06245"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845802.1"
                     /translation="MDVREPLSAAVRALKANKLRSALTTLGIIIGVAAVIVVVSLVQG
                     LKTSVLKQVEKAGSQTLFVRPVFPGELPPEEFARLKDRDLTLDHMRALAKDMPQLTHL
                     TPVFFAGYEVKLAGRTSNTRVVMTDDSYLELNSVNLSAGRNFVPSDLRLASKVAILGP
                     TLVEKLGIQGNPIGRTLVVNKNLSLEIVGLLEPQGGSLGNDPDDVIMVPLSTGISQLT
                     ETQRRQLFFQARVDPRLSADDGADMVTDALRRIKGLRGKQPNSFRVFSPKQITGIVSG
                     ITGTITAVAGGMVSIALLVGGIGIMNIMLVSVTERTREIGVRKAVGAKRRDIMLQVLI
                     EAAFLCLLGGAIGVGLGFILGAILGKALMGTMGSVPLWAIVSALAVPGAIGLIFGLYP
                     AAKASKLDPIEALRYE"
     gene            complement(4718..5965)
                     /locus_tag="VFV26_06250"
     CDS             complement(4718..5965)
                     /locus_tag="VFV26_06250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4845803.1"
                     /translation="MASRKTKLLLGGAAALLVLIVLGVAFGGAKDEDSAFSWDAISRG
                     DIRETITASGEIRAKTQINIGTSVAGEIKAIHVKDGQNVKAGDLLVTIDQERLRQSMA
                     QATAALEAVRQDAARLEGAMRRSVDSFPRYEALRQQGLMSDEDFRQQKLAKESAVLSY
                     SSAKANVAQSEANLKAMQDGLSKATLRAPITGRVTSLKAEKGETAIPGMSNLPGATLM
                     IISDMSEMQAEIKVNESEVVRTKVGQTAQVTVESLPGKVFHGSVIEVATGTEKTGTDA
                     NLYKVKVLLQGQRADLDNLRPGMSARAVILTQEAKGVLRVPLQAVLEREGTLEDAQKQ
                     GLLAPSTRNVSMAYKDGKALEVVVQVGIANTQFFELKGGLAEGDKVLTGPLRKLKELK
                     DKAAVKLRARSDSELAKAKDPKK"
     gene            complement(5966..>6242)
                     /locus_tag="VFV26_06255"
     CDS             complement(5966..>6242)
                     /locus_tag="VFV26_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845804.1"
                     /translation="HLLLVAVICLVRPIGGLTPDKIAPTSLGYFLQVESLRIQALLYA
                     LDLFYLAEAVLAYLALRYLVRMKTAGALICVLLPLIISLGFRLLGAR"
BASE COUNT          976 a         2039 c         2194 g         1033 t
ORIGIN      
        1 ccaccgcccg cggcttcgcc aggctggggg tgagggcatg gccgcaccag cctgccaaga
       61 gacctaaaga cagcaggccg aggatgaggg cactccggcg catggaacct ccaaagcgga
      121 acccaatcta tctgtttggg gaaatcggtc aaccccttgg aatcgaagga ttaggatttt
      181 ctgaaacagg tgcttgacat gtgacttcaa cacactaata ttttattcgg caacagtgtc
      241 atggcctgtg tctcaggcgc atggacgact gggtgcccca ttcacaggag gaactcatga
      301 ccatccttcg cacccgcaac ccccagaccc tgccggccac ggccgccagc ctggagccct
      361 tccgcctcat gcgggacttc ctgcgctggg atccgctccg ggactacgac ctcggcgctc
      421 ccgccgcggc cttcatgccg agcttcgacg tgaaggaaag tccggacgcc taccagttca
      481 gggcggacct gccgggcatc ctggaggccg atctggagat cagcctcgag ggcacccgcc
      541 tcacggtggc cggcaagcgc gatgacgaga ccctgaaaga cggcgagcgc gtccacctgt
      601 cggaacgcag ccacggccgg ttcagccgca ccttcacgct gcccgaggat gtggagggcg
      661 agaaggtggt ggccgaactc cgcaacggcg tcctcaccct catggtgccg aagcgcccgg
      721 aggtgcggcc ccgcaagatc aacgtcagtc tgggatgagc ctcccgccta cgaaaaaggc
      781 cccggaaacg gggccttttt cgcatcagtt gtagaagtac tggcgggggc cgaaggtccc
      841 cggtgcggct ggattgttga gacgcaccac gatatcgccg tccgcgagaa ccaggtccgg
      901 gtggccatcc ccgtccatgt caccgaaggc cacgcccatg gggccccagg cgccaaggta
      961 gtttgtgggg gccagcaggg ttcctgcggt ggcggaatcc tggagaagca cggacacgct
     1021 gcccgggtcg ccgggaagcc ccgcattcgc cacggccacg tccaccttgc catcgccgtt
     1081 cagatccccc acggccaggg cggcggagcg gtagcccgtg gtgtagtgga ccggcggcag
     1141 gaaggcgccg gccgtgccct ggagcagcac gctgagcccc tggctgtcgg ggctgagagc
     1201 cgcgccatag ttggcggtca ggaggtccgg cttgccatcg ccgttgatgt ccgcggcctt
     1261 gatggccacg ggctggacgc ccgtggagta gtccacggcg gaagcgaata caccggcgct
     1321 ggtctggagc agtacggaca cggtgttggc ggtggtggcc acggcgatgt cggcgaaccc
     1381 gttgccgtcc agatccgcca cggtcacggc ctggggctgg cccccgatgg tgtaggtggt
     1441 ggcaggcccg aaggtgacct ggttcggtgt gggcaccgtg gggaccacct ggcggaagac
     1501 cgtcacgacc gggggcgggg ggggcaccac ggcggcggtg acttccggat aggcggccac
     1561 cacgatatcc acgaggccgt cgccgttcac atcgcccacg gccacatcca ggggaatgct
     1621 gccagtggtg ggaaggacgg ttgcgggcag gaagaacccg ggccgggccg ggtccgccag
     1681 cctcacgctc acggaccggt catgggtgtt gaccaccacg agatcggggc ggccgtcggc
     1741 attcacatcc gacaccacca ggttggccgg ctccatgccc acgccgaagc gggtgggcat
     1801 ggcgaagctg cccgcggggc cctggaggcg cgtggagaca tagccctggg tgggggcccc
     1861 gccgaagtct gtggacacca ggcccaggat gtcggactgc ccgttggcgt cgatgtccgc
     1921 caccgcgatg gcgttcacca gatagctcga tgagggcccg tacacgtaat ctgtgcctga
     1981 gcagcccagc agggccagga tgccgagggt tccgagggag agggagacgc ggggacgcat
     2041 gtggactcca tgaacctgtg gaaacaaggg tgtgtggcct ggcgtgattc cgcaagggcc
     2101 catcagacgg actcgacgct cacctgccag gtgaccagct cccggggcag cagggcgggc
     2161 cagtaggcca cgatctcctg ggccttgggg cggcccccgg cgaagcccgt gacgcctgcg
     2221 gggccggcgg tgacgagggg ggcgatctcc cggccgaagc gttccacttt tttccgatcg
     2281 gaatccttca cgctcaggcg caggacgatc tcggcgggat ccgcaggggc cggtgccatg
     2341 cccgcatgga ccgtgctggc gcccaggaac tcggcatccg tgtgctcgta ctcgaagccc
     2401 gccgccttca gccgcttcca gacgatgtcc gcgcagagct gggccttctc cagggcccgg
     2461 gggccgcaga gggtcagctg gcccgtggcc ttgtagcccc gcaggtaggc cccgctcacc
     2521 ttgaggaagg gcgtgcgggg cttgccggtg atgcccgaga cgcgcacccg gtccgggcct
     2581 gcctgttcga ggtggatgct ggtgaattcc gccaccacgt ccggcgtgat gtagttttcc
     2641 ggatccccca tttcgtagac cagctgctcg ctcaccgtat ccactgtcac catgccgccg
     2701 gtgcccgcgt gcttggtgat gacgaaggtg ccgtcctccg aacattccgc gatggggtag
     2761 cccacgttcc agaggtcggg cacctcccac cagcgggtga agttgccgcc cgtgctctgg
     2821 gcgccgcact ccaggatgtg cccggccacg gtgcccgcgg ccagccggtt ccaatcatcg
     2881 gcggcccact tgaactcatg gatgaggggc gccagggtga ggccgggatc cgtgcagcgg
     2941 cccgtgagga cgatgtcggc gccggtgtcc agggcctcca ccatggcctg ggtctggagg
     3001 tagacgttgg cgctgaggat ctcccggggc gcatcgaaga ggccctcgcc cgtgtccatg
     3061 ttggccagct tcagcccctg cgcctggaac tcgggcagcc gcgccagcac atcatcgccg
     3121 gtcaccgtgg cgaccttcag gcctttcacg cccagcttcc gcgccacctc cagcacggcg
     3181 gcccggcagg cctcgggatt cacgccgccg gcgttcgcca ccacgcggat gcccttggcc
     3241 ttgagctggg gcagcacgcg cttcatcagg tccacgaagt ccgtggcgta gcccagctgc
     3301 ggatccttcc gccgctgctt ctgcatgatg gacagcgtca cttccgccag gtaatccagc
     3361 gtcaggtagt cgatgccgcc cgcctccacc agacgcaccg gggcatcgat gctatcgccc
     3421 cagaaacctt ggccattggc aatgcggacg agcttggaca tggagactcc ggttgggggg
     3481 gagcctccag tctactcgta gcgcagcgcc tcgatgggat ccagcttgct ggccttggcg
     3541 gcggggtaga ggccgaagat gaggccgatg gcgccgggga cggcgagggc gctgacgatg
     3601 gcccacaagg gaaccgagcc catggtgccc atgagggcct tgcccaggat ggcgcccagg
     3661 atgaagccca ggcccacgcc gatggctccg cccaggaggc acaggaatgc ggcctcgatg
     3721 aggacctgca gcatgatgtc gcggcgcttg gcgcccacgg ccttgcgcac gccgatctcg
     3781 cgggtgcgct cggtgacgct caccagcatg atgttcatga tgccgatgcc gcccaccagc
     3841 agggcgatgg agaccatgcc cccggccacg gcggtgatgg tgcccgtgat gccgctcacg
     3901 atccccgtga tctgcttggg gctgaacacc cggaagctgt tgggctgctt gccgcgcagc
     3961 cccttgatgc ggcggagggc gtccgtcacc atgtcggcgc cgtcgtcggc cgacaggcgg
     4021 ggatccaccc gggcctggaa gaagagctgg cggcgctggg tttcggtcag ctgggagatg
     4081 cccgtgctga gggggaccat gatgacgtcg tccggatcgt tgccgaggga gccgccctgg
     4141 ggctcgagca gccccacgat ctcgaggctg aggttcttgt tcaccaccag cgtgcggccg
     4201 atgggattgc cctggatgcc gagcttctcc acgagggtgg ggcccaggat ggccaccttg
     4261 ctggccaggc gcaggtccga cggcacgaag ttccggccgg cggagaggtt gacgctgttc
     4321 agctccaggt agctgtcgtc ggtcatgacc acgcgggtgt tcgaggtccg gcccgcgagc
     4381 ttcacctcgt agccggcgaa gaacaccggg gtcaggtggg tgagctgggg catgtccttg
     4441 gccagggccc gcatgtggtc cagggtgagg tcgcggtcct tcaggcgggc gaactcctcc
     4501 ggcggcagtt cgccggggaa cacgggccgg acgaagaggg tctggctgcc ggccttctcc
     4561 acctgcttca gcacgctggt cttgaggccc tgcacgaggc tcaccaccac gatcaccgcc
     4621 gccacgccga tgatgatgcc cagggtggtg agcgccgagc ggagcttgtt cgccttcagg
     4681 gcgcggacgg cggcggagag gggttcgcgg acgtccatta cttcttcggg tccttggcct
     4741 tcgccagctc gctgtcggag cgggcgcgga gcttcacggc ggccttgtcc ttcagctcct
     4801 tcagcttgcg gagggggccc gtgagcacct tgtcgccctc cgccagaccc cccttcagct
     4861 cgaagaactg ggtgttggcg atgcccacct gcaccaccac ctccagggcc ttgccatcct
     4921 tgtaggccat ggagacgttg cgggtggagg gcgccaggag gccctgcttc tgggcatcct
     4981 ccagggtgcc ttcacgctcc agcacggcct gcaggggcac gcgcagcacg cccttggcct
     5041 cctgggtgag gatgacggcg cgggcgctca tgcccgggcg gaggttgtcc agatccgccc
     5101 gctgaccctg gagcagcacc ttcaccttgt agaggttggc gtccgtgccg gtcttctcgg
     5161 tgcccgtggc cacctcgatg accgagccat ggaagacctt gcctggcagg gattccaccg
     5221 tcacctgggc ggtctggccc accttggtgc ggaccacttc gctttcgttg accttgatct
     5281 ccgcctgcat ctcgctcatg tcggaaatga tcatgagggt ggcgcccggc aggttgctca
     5341 tgccggggat ggcggtctcg cccttctcgg ccttcaggct cgtgacgcgg ccggtgatgg
     5401 gcgcgcggag ggtggccttg gacaggccgt cctgcatggc cttcaggttg gcctcgctct
     5461 gggccacgtt ggccttggcg ctgctgtagg acagcacggc gctttccttg gcgagcttct
     5521 gctgccggaa atcctcgtcg gacatgaggc cctgctgccg gagggcttcg tagcgcggga
     5581 agctgtccac actgcgccgc atggcgccct ccagacgggc ggcgtcctgg cggacggcct
     5641 cgagggcggc ggtggcctgg gccatggact gccgcagccg ctcctggtcg atggtgacga
     5701 gcaggtcgcc ggccttcacg ttctggccat ccttcacatg gatggccttg atctcgcccg
     5761 ccacggaagt gccgatgttg atctgggtct tggcgcggat ctcgccgctg gccgtgatgg
     5821 tctcgcggat gtcgccccgg ctgatggcat cccaggagaa ggcgctgtcc tcgtccttgg
     5881 cgccgccgaa ggcgacgccg aggacgatca ggacgaggag ggcggcggcg ccgccgagca
     5941 ggagcttggt cttcctggaa gccatctacc tggctccaag gagccggaag cccagtgaga
     6001 tgatcagggg cagcagcacg cagatcaggg cgccggcagt cttcatgcgg accaggtagc
     6061 ggagtgccag gtaggccagg accgcctcgg ccaggtagaa gaggtccagg gcgtagagga
     6121 gcgcctggat ccggaggctc tccacctgca ggaagtagcc cagggaggtg ggtgcgatct
     6181 tgtcgggcgt gaggccgccg atgggccgca ccaggcagat caccgccacc agcagcaggt
     6241 gg
//
LOCUS       DASUDT010000307         6742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_478940, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000307 DASUDT010000000
VERSION     DASUDT010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6742
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478940"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2254)
                     /gene="infB"
                     /locus_tag="VFV26_06260"
     CDS             complement(<1..2254)
                     /gene="infB"
                     /locus_tag="VFV26_06260"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEX4845805.1"
                     /translation="MLRINQLAKELGVANQEVIEACEKRLGLQGKSHSSNLTDDQADQ
                     LRRGFQGKHKGESDAPPLALHKPSAAVKVVKAAEPRPEPQPEAPKAAPAVLVKKAEPR
                     PEPPVEGEAPAAPAPAPQAAPQTKATEPAASAEPAAAPAQPAAEAPQETFSRLKVSSG
                     AAPAPREDKPARYIQLPPARPAGGAPQRPAQPSGSGPRPEAGARPIVQRPGQAPVPTN
                     VQRSGMPQKEKAVLQMATNTGRGEVRHDIPAPVTPSRRPYIPPAITEMRPDQGFSRIK
                     TSDTPAPAPRSTEPARYIQLPQARPAPGSRPSGPGSRPSGPGSRPGGPGMGSRPGGGP
                     GRPGMGSRPGGPGGRPGGPGRGPSIPASGPIDPNSQKGPGRGAHVGGKKKKGGYVRSK
                     EEELDLKLRQPRSRAQQVASEYIEEEIGIVMLSEGVTVKELAEKCNRPAKDVVAKLLH
                     RGIFATINQPLDTEMAKDIAREFGFLADIVTFEEDVQIAADESGEVVGEKRPRPPVVT
                     IMGHVDHGKTSLLDAIRKTKVAAGEAGGITQHVGAYHVEVKDPNTGEMRKVVFLDTPG
                     HEAFTKMRARGAKVTDIAVLVVAADDGVMPQTVESINHAKAADVPLVIAVNKIDKPGA
                     NPDKVQQGLLQYSVQTEAYGGDVPAVLVSAKTRQGLDELLETLLLVADMKELKAVYDC
                     PAAGSIIEGRLDRGRGPVATVLVQRGTLKAGDIFVAGATMGRVRAMFDYLGQRVTEVG
                     PSSAVQILGFE"
     gene            complement(2313..3641)
                     /gene="nusA"
                     /locus_tag="VFV26_06265"
     CDS             complement(2313..3641)
                     /gene="nusA"
                     /locus_tag="VFV26_06265"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX4845806.1"
                     /translation="MANVATTFFDSVKMIAAEKGIPEEDVFAAVEEALAKAADKYFNA
                     QDFYGNFQAQMDRETGEFHVYALKQVVAEVEEEDLEISLAEAQTLNPDAAEGDTLWLP
                     QDTSQLGRIAAQAAKQVLVQKVREAERERIFTEFADRIGEVVVAEVKRFEKSAIILEI
                     DRVESMLRRNEALRGDRFDKGQRIKVVIVSVDRSAKDPQVQVSRTDPRLLIKLFENEV
                     PEIHDGTVVIRNCVREAGDRAKVAVHSLDPDVDPVGACVGLKGSRVQAIIRELKNEKI
                     DIVRYSDDAAQFIANALNPAKAIRVNLGDPESRRVEVIVDDEQLSVAIGKRGQNVRLA
                     AKLTGWNIDVRSEADKRREAEVAMGLALPAANAEEASAVEAAAPASTLLDEIQAEGLD
                     AALASQLAAAGFPNAKSLYTVTAEQLMQVDGMDQDLAFRLIDAVQAHFGE"
     gene            complement(3643..4212)
                     /locus_tag="VFV26_06270"
     CDS             complement(3643..4212)
                     /locus_tag="VFV26_06270"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEX4845807.1"
                     /translation="MDLKKAQPPIERQLALLGYELVHLETVREGRDEMLRLYIDHLDG
                     EATGRKVTLDDCTAAHEGLLLWMDVEFPDLREKLGVEVSSPGMERPLTRGDHFRRFAG
                     RLCRVQTAAPINGQKRFKGWIGPVEGDSITLEEDGVLKTVPIEAIQKARLAPFDEDKT
                     PRPKHLTARFTEMPDADGVETSAAEDEEA"
     gene            4396..5310
                     /gene="folD"
                     /locus_tag="VFV26_06275"
     CDS             4396..5310
                     /gene="folD"
                     /locus_tag="VFV26_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEX4845808.1"
                     /translation="MATILDGKAHADRMLEAVRQGVEARAARGLRAPALAVVLVGDDP
                     ASQVYVRNKAAACAKVGITSLEHRLAADTPQADLDALIDRLNADPAVDGILVQLPLPK
                     GLDSKEALHRISPAKDVDGFHPMNQGLLLEGLPGLRPCTPSACMSLLAHHGVDLKGLR
                     AVVLGRSEIVGKPMALMLLEQHATVTIAHSRTKDLPAVCREADLLVAAVGRPGLVEGS
                     WIKPGAVVVDVGINRVEDLALGEKIFAAEPKKLEALRAKGGVLCGDVRFGEAMDVASA
                     VTPVPGGVGPLTIAGLLTNTLQAANQQG"
     gene            complement(5324..6082)
                     /locus_tag="VFV26_06280"
     CDS             complement(5324..6082)
                     /locus_tag="VFV26_06280"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEX4845809.1"
                     /translation="MPFNQPPLLGRIAFVTGSSRGIGRAIAVEFARWGADVVVHAQKN
                     GDLAEAVAEEIRGMGRRSLAVLADVRVKAELEAAADRVKAELGPVDILVNNAGTRQDG
                     PFILMGDEKWEEVMNVNLRGTVYATKAFVRGMMARKWGRIVNIVSPTGIIGKAGQTNY
                     GASKGAVIALTRSLAREMAPFGVLVNAVNPGLIHTELTQDVPEEVRRQMLAPTILQRE
                     GEPEEVAGVVAFLCSDWASYMSGQIINVDGGLCP"
     gene            6129..6437
                     /locus_tag="VFV26_06285"
     CDS             6129..6437
                     /locus_tag="VFV26_06285"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX4845810.1"
                     /translation="MSKDLVSPDAMEAFLKAHPDWVAQGDSHGLTLRRRYVFSAYPRG
                     LGFVVAAAEHAEKVDHHPDLTLGYRWVVAVLTTHVARGVTQRDLDLAEALDRMYLEHL
                     "
     gene            complement(6448..>6742)
                     /locus_tag="VFV26_06290"
     CDS             complement(6448..>6742)
                     /locus_tag="VFV26_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845811.1"
                     /translation="PSDRPSRPRPEGDDRPRRPFGAADRPARPRREDGEARPRRSSDP
                     SDRPSRPRPEGDDRPRRSFSATDRPSGPRREGPGDRPARKPAPRTGKPKPRKF"
BASE COUNT          899 a         2203 c         2519 g         1121 t
ORIGIN      
        1 cctcgaaacc gaggatctgc acggcgctgg aggggccgac ttcggtgacg cgctggccca
       61 ggtagtcgaa catggcgcgg acgcggccca tggtggcgcc agccacgaag atgtcgccgg
      121 ccttgagggt gccgcgctgc accagcaccg tggccacggg gccccggccg cggtcgaggc
      181 ggccttcgat gatggacccg gcggcggggc agtcgtagac ggccttcagt tccttcatgt
      241 ccgccacgag cagcagggtc tcgaggagct cgtcgaggcc ctgcctggtc ttggcgctga
      301 cgaggacggc cggcacatcg ccgccgtagg cctcggtctg gacgctgtac tggagcaggc
      361 cctgctggac cttgtccggg ttggcgccgg gcttgtcgat cttgttgacg gcgatgacga
      421 ggggcacgtc ggcggccttg gcgtggttga tggattccac ggtctggggc atgacgccgt
      481 cgtcggcggc caccaccagg acggcgatgt ccgtgacctt ggcgccgcgg gcgcgcatct
      541 tggtgaaggc ctcgtggccc ggggtgtcga ggaagaccac cttgcgcatc tcgccggtgt
      601 tcggatcctt cacttccacg tggtaggcgc ccacgtgctg cgtgatgccg ccggcctcgc
      661 ccgcggccac cttggtcttg cggatggcgt ccagcagcga ggtcttgccg tggtccacgt
      721 ggcccatgat ggtcacgacg ggggggcggg ggcgcttctc gcccaccact tcgccggatt
      781 catcggccgc gatctggaca tcctcttcga aggtgacgat gtcggccagg aagccgaatt
      841 cgcgggcgat gtccttggcc atctcggtgt cgaggggctg gttgatggtg gcgaagatgc
      901 cgcggtggag gagcttggcg accacgtcct tggcggggcg gttgcacttc tcggcaagct
      961 ccttgaccgt cacgccctcg gagagcatga cgatgccgat ttcctcttcg atgtattcgc
     1021 tggccacctg ctgggcgcgg gagcggggct ggcggagctt gaggtcgagt tcctcttcct
     1081 tgctccggac gtagccgccc ttcttcttct tgccgcccac atgggcgccg cggccggggc
     1141 ccttctggct gttgggatcg atggggccgg aggccgggat ggacggaccg cggccgggac
     1201 cgccggggcg gccgccaggg ccgccgggac gggagcccat gccgggacgg ccggggccgc
     1261 cgccgggacg ggagcccatg ccgggaccgc caggacggct gccagggccg ctggggcggc
     1321 tgccggggcc gctggggcgg ctgccgggcg cagggcgggc ctggggcagc tggatgtagc
     1381 gggcgggctc tgtggaccgg ggcgcggggg ccggagtgtc cgaggtcttg atgcgggaga
     1441 agccctggtc gggtcgcatc tccgtgatgg cgggggggat gtagggacgc cgggagggcg
     1501 tgaccggagc cgggatgtcg tggcggactt cgccgcggcc cgtgttggtg gccatctgga
     1561 ggacggcctt ttccttctgg ggcatgccgg accgctgcac gttggtgggc acgggggcct
     1621 ggccggggcg ctgcacgatg ggacgggcgc cggcctcggg acggggaccg gagccggagg
     1681 gctgggccgg gcgctgcgga gcgccacccg ccgggcgggc cggaggcagc tggatgtagc
     1741 gggcgggctt gtcctcccgg ggggccggag cggctccgct cgacaccttc aggcgggaga
     1801 aggtctcctg cggggcctcg gcggccggct gggcgggagc ggcagcgggc tcggcagagg
     1861 ccgccggctc ggtggccttg gtctgggggg cggcctgggg cgccggggcg ggggcggccg
     1921 gagcttcgcc ctccaccggg ggctcgggcc ggggttcggc cttcttcacc agcacggccg
     1981 gggccgcctt gggcgcctcg ggctggggct cgggacgggg ttcggcggcc ttcaccacct
     2041 tcacggcggc ggagggcttg tgcagcgcga ggggcggcgc atcgctctcc cccttgtgct
     2101 tgccctggaa accgcggcgc agttgatccg cctggtcatc ggtgaggttg gagctatggc
     2161 tcttcccttg gaggcccaga cgcttctcac aggcctcgat gacctcctga ttggcgactc
     2221 cgagctcttt ggcgagttgg ttgatacgca gcatgtaagc ggattacctc ggcctggggg
     2281 gtggggaacg ggaagggctg caggactaca gcctactccc cgaaatgagc ctgcacggca
     2341 tcgatgagac ggaaggccag atcctgatcc atgccgtcca cctgcatgag ctgctcggca
     2401 gtgacagtgt aaagggattt ggcattgggg aagcccgcgg cggccagctg ggacgcgagg
     2461 gcggcatcca gcccctcggc ctggatctcg tccagcaggg tggaggcggg ggcggcggct
     2521 tccacggcgg aggcctcctc ggcgttcgcc gccggaaggg ccaggcccat ggcgacctcg
     2581 gcctcgcggc gcttgtcggc ctcgctgcgg acatcgatgt tccagcccgt gagcttggcg
     2641 gccaggcgga cgttctgtcc gcgcttgccg atggcgacgc tgagctgctc gtcgtccacg
     2701 atgacctcga cccggcggga ttcgggatcg ccgaggttca cccggatggc cttggcgggg
     2761 ttcagggcgt tggcgatgaa ctgggcggcg tcgtcggagt agcggacgat gtcgatcttc
     2821 tcgttcttca gctcgcggat gatggcctgg acgcggctgc ccttgaggcc cacgcaggcg
     2881 cccacgggat ccacatcggg atcgaggctg tggacggcca ccttggcgcg gtcgccggct
     2941 tcgcggacgc agttgcggat gaccacggtg ccgtcatgga tctcggggac ttcgttttcg
     3001 aagagcttga tgagcagccg cggatccgtg cggctgacct gcacctgggg atccttggcg
     3061 ctgcggtcca cgctcacgat gacgaccttg atgcgctggc ccttgtcgaa gcggtcgcca
     3121 cgcagggcct cgttgcggcg cagcatggac tccacccggt cgatctcgag gatgatggcg
     3181 ctcttctcga agcgcttgac ctcggccacc accacctcgc cgatgcggtc ggcgaattcg
     3241 gtgaagatgc gctcgcgctc ggcctcgcgg accttctgca ccagcacctg cttggcggcc
     3301 tgggcggcga tgcggcccag ctggctggtg tcctggggca gccagagggt gtcgccctcg
     3361 gcggcgtcgg gattcagggt ctgggcttcg gccaggctga tctccagatc ctcctcctcc
     3421 acctcggcca ccacctgctt cagggcgtag acatggaact cgccggtctc ccggtccatc
     3481 tgggcctgga agttgccgta gaagtcctgg gcattgaagt acttgtccgc cgccttggcg
     3541 agggcttcct ccaccgcggc aaagacatcc tcctcgggga tgcccttttc agcggcaatc
     3601 atcttcacgc tgtcgaaaaa ggtcgttgcc acattcgcca tctcaggcct cctcgtcttc
     3661 ggcggcgctt gtctctacgc cgtcggcatc tggcatttca gtgaaccggg ccgtcaagtg
     3721 cttgggccgc ggggtcttgt cttcgtcaaa gggcgccagg cgcgccttct ggatggcctc
     3781 gatgggcacg gtcttcagga cgccgtcctc ttcgagggtg atgctgtcgc cctccacggg
     3841 cccgatccag cccttgaagc gcttctggcc gttgatgggg gcggcggtct gcacgcggca
     3901 gagccggccc gcgaagcggc ggaagtgatc gcccctggtg aggggccgct ccatgccggg
     3961 gctgctgact tccacaccga gcttttcgcg gaggtcgggg aattcgacat ccatccacag
     4021 gagcaggccc tcgtgggcgg cggtgcagtc gtccagggtg accttgcggc cggtggcctc
     4081 gccgtccaga tggtcgatgt agaggcgcag catctcgtcc cggccttcgc ggaccgtctc
     4141 caggtgcacc agctcgtagc ccagcagggc cagctggcgc tcgatggggg gctgggcttt
     4201 cttcagatcc aaggagactc cggacgaaca acaaaaaagg tgggtcgaac ccacccagtc
     4261 ttggcacccg gttccgggac gccatggccg aattgaattc caagtctagc gctcctttcc
     4321 aggaatctca atgaaagaga atcttgatga gggccacagc cgccatggga ttcaatggaa
     4381 cctaggagtt ctgatatggc cacgatcctg gatggcaagg cgcacgcgga ccgcatgctg
     4441 gaggcggtgc gccagggggt ggaggcccgg gcggcccggg ggctgcgggc cccggccctg
     4501 gcggtggtcc tggtgggaga cgaccccgcc agccaggtct acgtgcgcaa caaggccgcc
     4561 gcctgcgcca aggtgggcat cacctccctg gagcaccggc tggcggcgga cacgccccag
     4621 gcggacctgg acgccctcat cgaccgcctg aacgccgatc cggccgtgga cggcatcctg
     4681 gtgcagctgc ccctgcccaa ggggctggat tccaaggagg ccctgcaccg catcagcccc
     4741 gccaaggacg tggacggctt ccaccccatg aaccagggcc tgctgctgga gggcctgccg
     4801 ggcctgcgcc cctgcacccc cagcgcctgc atgtccctgc tggcccacca cggcgtggac
     4861 ctgaagggcc tgcgggccgt ggtgctgggg cgcagcgaaa tcgtgggcaa gcccatggcc
     4921 ctcatgctgc tggagcagca cgccaccgtg accatcgccc acagccgcac caaggacctg
     4981 ccggccgtct gccgcgaggc cgacctgctg gtggccgccg tgggccgtcc ggggctggtg
     5041 gagggctcct ggatcaagcc cggcgccgtg gtggtggatg tgggcatcaa ccgggtggag
     5101 gacctggccc tgggcgagaa gatctttgcc gccgaaccca agaagctgga ggccctcagg
     5161 gccaagggcg gggtgctgtg cggcgacgtg cgctttggcg aggccatgga cgtggcctcc
     5221 gccgtgacgc ccgttcccgg cggcgtgggg cccctcacca tcgcggggct gctgaccaac
     5281 accctccagg cggcgaatca gcagggctga tccgccaggg gcgttacggg cacaatccgc
     5341 cgtccacatt gatgatctgg ccgctcatgt agctggccca gtccgagcag aggaaggcca
     5401 ccacgccggc cacctcctcc ggttcaccct cccgctggag gatggtgggc gcgagcatct
     5461 ggcggcgcac ctcctcgggc acgtcctggg tgagctccgt gtggatgagg ccggggttca
     5521 cggcattcac cagcacgccg aagggggcca tctcccgggc caggctgcgg gtgagggcga
     5581 tgacggcgcc cttgctggcg ccgtagttgg tctggcccgc cttcccgatg atgcccgtgg
     5641 ggctgacgat gttgacgatg cggccccact tgcgggccat catgccgcgc acgaaggcct
     5701 tggtggcgta cacggtgccg cggaggttca cgttcatgac ctcctcccac ttctcgtcgc
     5761 ccatgaggat gaaggggccg tcctgacggg tgccggcgtt gttcacgagg atgtcgacgg
     5821 ggcccagctc ggccttcaca cggtccgcgg cggcctccag ttcggccttc acgcgcacgt
     5881 ccgccagcac cgccagggag cggcggccca tgccgcggat ctcctcggcc acggcctcgg
     5941 ccagatcccc gttcttctgg gcatgcacca ccacgtccgc cccccagcgg gcgaattcca
     6001 cggcgatggc ccgcccgatg ccccgggagg acccggtgac gaaggcgatg cggccgagca
     6061 ggggaggctg gttgaagggc atggcgcgat tccaagacaa cggactagga tgccccaggg
     6121 gggaaagcat gtccaaggat ctggtgagcc ctgatgccat ggaggccttc ctgaaggccc
     6181 accccgactg ggtcgcgcag ggggattccc acggcctcac cctgcgccgc cgttatgtct
     6241 tctcggccta tccccggggc ctgggtttcg tggtggccgc cgcggagcac gcggagaagg
     6301 tggatcacca cccggacctc acgctcggct accgctgggt cgtggccgtc ctcaccaccc
     6361 acgtggcccg gggcgtcacg cagcgggacc tggacctggc ggaggccctg gaccggatgt
     6421 acctggagca cctgtaggcg ccgccggcta gaacttccgc ggcttgggct tgcccgtgcg
     6481 gggcgcgggc ttgcgggcgg ggcggtcccc ggggccttcg cggcgcggcc ctgagggccg
     6541 gtccgtggcg ctgaagctgc ggcggggacg gtcatcgcct tcgggccggg gacggctggg
     6601 gcgatccgag gggtcggaac tgcggcgggg ccgcgcctca ccgtcctcgc gacggggccg
     6661 ggcgggacga tccgcggcgc cgaaggggcg gcggggacgg tcatcgcctt cgggccgggg
     6721 acggctgggg cgatccgagg gg
//
LOCUS       DASUDT010000308         2071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1450758, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000308 DASUDT010000000
VERSION     DASUDT010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450758"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2012
                     /locus_tag="VFV26_06295"
     CDS             <1..2012
                     /locus_tag="VFV26_06295"
                     /inference="COORDINATES: protein motif:HMM:NF005829.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HEX4845812.1"
                     /translation="PGAVLRLIIAEKPSMGRALAEALGLPGRGRSLIEGNGLVVTWCV
                     GHLVEALNPEGYDPAWKAWRWDRLPIFPEPFRYAPIEQTKEQFDVVARLLNREDITEI
                     VNATDAGREGELIFDLVYRLAECAKPVKRFWTSSLTPEAIQAAYAAMKPGEAYTGLRD
                     AARSRQEADWLVGINATRAQTLRMRRAGAEDGVWSVGRVQTPTLALLVRRELEIRDFK
                     PQPFWTLRARFAHPNGSYEGRWFKEQDGQTQERFATEAEAKALAAALAGRPGKIRSAT
                     GRTEKKKPELLYDLTALQKEANRRFGFTAEGTLGLAQNLYEKQLISYPRTNSRHLTEA
                     DVLKAPQWIKALAQGQLTELQPFLDQLRKQWPVKLDKRFVNDKEVEDHAALVPTEKPA
                     RGLAGDELRIYELIARRFLGAYFPDRVEAKTTLITEVEGETFKTSGTVVKEEGWSAVD
                     PPYRRKKAEKAVDPAEADEDAEDDVEGGLPVVKKGDAVEVSSLHPKEGKTTPPKRMSE
                     GDLLSAMQGAGRDLDDEALRGAMRDCGLGTPATRANMIETLIKRAYIERKRNILLPTD
                     KGIRLIQGLPAEALRSAELTGSWEARLERMRRGEETRAAFMTDIRGFVSGVVAELQDA
                     PAPQVHGAPCPACGQPMRIIPSTRRGEFFHRCSPCNVMEPVVKGP"
BASE COUNT          355 a          734 c          732 g          250 t
ORIGIN      
        1 tcccgggagc cgtcctgcgc ctgatcatcg ccgagaaacc cagcatgggc cgcgccctgg
       61 cggaggccct gggcctgccg ggaaggggcc ggagcctcat cgaaggcaac gggctggtgg
      121 tgacctggtg cgtgggacat ctggtggagg ccctgaatcc cgaaggctac gatcccgcct
      181 ggaaggcctg gcgctgggac cgcctgccca tcttcccgga gcccttccgc tacgcgccca
      241 tcgagcagac gaaggagcag ttcgacgtgg tggcgcgcct gctcaaccgg gaggacatca
      301 ccgagatcgt gaacgccacg gacgccgggc gcgaggggga gctgatcttc gacctcgtct
      361 accgcctggc ggagtgcgcc aagcccgtga agcggttctg gacgtccagc ctcacgccgg
      421 aggccatcca ggcggcctat gcggccatga agcccggcga ggcctacacc ggcctccggg
      481 acgccgcccg cagccgccag gaggcggact ggctggtggg catcaacgcc acccgggccc
      541 agaccctgcg catgcgccgc gccggggccg aagacggcgt gtggagcgtg ggccgcgtgc
      601 agacgcccac cctggccctg ctggtgcgcc gcgagctgga gatccgcgac ttcaagcccc
      661 agcccttctg gaccctccgg gcccggttcg cccaccccaa tggaagctac gaaggccgct
      721 ggttcaagga gcaggatggt cagacccagg agcgcttcgc caccgaggcc gaggcgaagg
      781 ccctggccgc ggccctggcg ggcaggcccg ggaagatccg cagcgccacg ggccggacgg
      841 aaaagaagaa gcccgagctg ctctacgacc tcacggccct gcagaaggag gccaacaggc
      901 gcttcggctt cacggccgag ggcacccttg ggctggcgca gaacctgtat gaaaagcagc
      961 tcatctccta cccccgcacc aacagccgcc acctcaccga ggccgatgtg ctgaaggcgc
     1021 cccagtggat caaggccctg gcccagggcc agctcacgga gctgcaaccc ttcctcgatc
     1081 agctgcgcaa gcagtggccc gtgaagctgg acaagcgctt cgtcaacgac aaggaggtgg
     1141 aggaccacgc ggcgctggtg cccacggaga agcccgcccg gggcctcgcg ggcgacgagc
     1201 tgcgcatcta cgagctcatc gcccggcgct tcctgggggc ctacttcccg gaccgggtgg
     1261 aggccaagac caccctcatc accgaggtcg aaggcgagac cttcaagacc agcggcacag
     1321 tggtgaagga ggagggctgg tccgccgtgg atccccccta ccggcgcaag aaggcggaga
     1381 aggcggtgga tcccgcggag gcggacgagg acgccgagga tgacgtcgag ggggggcttc
     1441 ccgtggtgaa gaagggggac gccgtcgagg tcagctccct gcatcccaag gagggcaaga
     1501 ccaccccgcc caagcgcatg agcgagggcg acctgctgtc ggccatgcag ggcgcggggc
     1561 gggatctgga cgacgaggcc ctgcgcgggg ccatgcggga ctgcggcctg ggcacgccgg
     1621 ccacgcgggc caacatgatc gagaccctca tcaagcgcgc ctacatcgag cgcaagcgca
     1681 acatcctgct gcccacggac aaaggcatcc ggctcatcca ggggcttccc gccgaggccc
     1741 tgcgcagcgc cgagctgacc ggcagctggg aggcccgcct ggaacgcatg cggcgcggcg
     1801 aggagacccg cgccgccttc atgaccgaca tccgcggctt cgtgtccggg gtggtggccg
     1861 agctccagga cgcgcccgcc ccgcaggtcc acggcgcccc ctgtcccgcc tgcggccagc
     1921 ccatgcggat catccccagc acccggcgcg gggagttctt ccaccgctgc tccccgtgca
     1981 acgtcatgga gcccgtggtg aaggggccgt gagccccatt ccgccgggtg gctgcggcgc
     2041 gcccgggctt gcctggaaac ggagcccggt c
//
LOCUS       DASUDT010000309         2933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1494881, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000309 DASUDT010000000
VERSION     DASUDT010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494881"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VFV26_06300"
     CDS             <1..210
                     /locus_tag="VFV26_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845813.1"
                     /translation="AEQEWQRATARYRVQAFSTTPGLNVVPTLNGVEIRARYITRAFE
                     RHETRLRLNQAVVELMHGPRTESPA"
     gene            375..2006
                     /locus_tag="VFV26_06305"
     CDS             375..2006
                     /locus_tag="VFV26_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX4845814.1"
                     /translation="MISFSNVSKQYGKQVLFIEADFQLNPGEKVGLVGPNGAGKSTLF
                     RMIMGEESPDEGSVTLPKKLTLGYFRQEVDEMAGRPVLDEAIAGSGRLGELHHELLDL
                     EHAMSDPERGDELEAILERFGHVQEEYQHLGGYELEARARACLHGLGFEDEQIDGDVG
                     ALSGGWKMRVSMAKVLLGNFDVLLMDEPTNHLDIESILWLEGFLKSVPATLLMTSHDR
                     DFMNRIVTKVLEIDGGDIVTFSGNYDFYVKEREQREANQEAAYARQQAKLAKEQRFIE
                     RFSAHAAKAAQVQSRVKALDKIERIEPPKKRRVVKWDFRIPGRSGDDVAMLEGVCKAY
                     GKRRLYDQFAFHIRRGERWCVMGKNGAGKSTLLKMISGAIQPDSGNVKLGASLKLGYF
                     SQQALDLLDPELTVIEQMQQDFPMEGLGVLRNLLGAFQFSGDDVDKRIRALSGGEKSR
                     LVMARMLFDPPNFLVLDEPTNHLDLATKEMLIEALKDFEGTMIFVSHDRTFLRGLASR
                     VLELGGEEHDGPLVFGGSYAEYVERMGREAPGVHN"
     gene            complement(2094..>2933)
                     /locus_tag="VFV26_06310"
     CDS             complement(2094..>2933)
                     /locus_tag="VFV26_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX4845815.1"
                     /translation="HLPIRHPRATAAEWQARIEAGQVLLDGRIATGGEILRAGQWLTW
                     DRPPWAEPEVPLATAILFEDGDLLAVAKPSGLPTLPGGGEFLDHTLLALVRRRHPEAS
                     PMHRLGRGTSGVVLFAPTEGARGPLQAAFQDPRARKVYRALCGGRPAEDAFEVAAPIG
                     ELPYGPLGVLHGACPEGRPSLSRVTVLERREGASLLDVEILTGRPHQIRIHLAFAGHP
                     LVGDPLYGPGGTPRHGTTALPGDPGYLLHAHRLELEHPRTGAWLTLECQPPPSLRMID
                     SMK"
BASE COUNT          485 a          988 c         1015 g          445 t
ORIGIN      
        1 gccgagcagg agtggcagcg ggccacggcg cgctaccggg tgcaggcctt ctccaccacc
       61 ccggggctga acgtggtgcc caccctgaac ggcgtcgaaa tccgggcccg ctacatcacc
      121 cgggcctttg agcgccacga gacccggctg cgcctgaacc aggccgtggt ggagctcatg
      181 cacggcccgc gcaccgaatc tccggcctga tcgcgcgcag gcgccgggtg gggatgcctg
      241 gacggcgggg cccctgtggt accctggagg ccccgtaggc ttgaggatcc tgctttccgc
      301 gacctcgatc ccctgtctct ggatcttccg ccgcccagac tcgccgggcg ccccaccttg
      361 cgcatcggat tcccatgatc tcgttttcca acgtcagcaa gcagtacggc aagcaggtcc
      421 tgttcatcga ggcggacttc cagctcaacc ccggcgagaa ggtgggcctg gtgggtccca
      481 acggggccgg gaagtccacc ctcttccgca tgatcatggg cgaggaatcg ccggacgagg
      541 gctccgtcac cctgccgaag aagctcaccc tgggctactt ccgccaggag gtggacgaga
      601 tggctgggcg tcccgtgctg gacgaggcca tcgccggcag cggccgcctg ggcgagctgc
      661 accacgagct gctcgacctg gaacacgcca tgtccgatcc ggagcggggc gacgagctgg
      721 aggccatcct ggagcggttc ggccatgtgc aggaggagta ccagcacctg ggcggctacg
      781 agctggaggc ccgggcccgg gcctgcctgc atggcctcgg cttcgaggac gagcagatcg
      841 acggcgacgt gggcgccctc tccggcggct ggaagatgcg tgtttccatg gccaaggtgc
      901 tgctgggcaa cttcgatgtc ctgcttatgg acgagcccac caaccacctg gacatcgaat
      961 ccatcctctg gctggaaggc ttcctgaagt ccgtgcccgc caccctgctg atgaccagcc
     1021 acgaccggga cttcatgaac cgcatcgtca ccaaggtgct ggagatcgac ggcggcgaca
     1081 tcgtcacctt ctcgggcaac tacgatttct acgtgaagga gcgggagcag cgcgaggcca
     1141 accaggaggc cgcctacgcc cgccagcagg ccaagctggc caaggagcag cggttcatcg
     1201 agcgcttctc cgcccacgcc gccaaggccg cccaggtgca gagccgcgtg aaggccctgg
     1261 acaagatcga gcgcatcgag ccgcccaaga agcggcgcgt ggtgaagtgg gacttccgca
     1321 tccccggccg gtccggcgat gacgtggcca tgctggaggg cgtctgcaag gcctacggca
     1381 agcggaggct gtacgaccag ttcgccttcc acatccgccg cggcgagcgc tggtgcgtca
     1441 tgggcaagaa cggcgcgggc aagtccaccc tgctgaagat gatctccggc gccatccagc
     1501 cggattcggg aaacgtcaag ctgggcgcca gcctcaagct gggctacttc tcccagcagg
     1561 ccctcgacct gctggatccc gagctcaccg tgatcgagca gatgcagcag gacttcccca
     1621 tggagggcct gggcgtgctg cgcaacctcc tgggcgcctt ccagttctcc ggcgacgatg
     1681 tggacaagcg catccgcgcg ctctccggcg gcgagaagtc acggctggtg atggcccgca
     1741 tgctcttcga tccgcccaac ttcctggtgc tggacgagcc caccaaccac ctggacctgg
     1801 ccaccaagga aatgctcatc gaggccctga aggatttcga aggcaccatg atcttcgtgt
     1861 cccacgaccg caccttcctg cgcggactcg cgagccgcgt gctggaattg ggcggggagg
     1921 agcacgacgg ccccctggtc ttcggcggct cctacgccga gtacgtcgag cgcatgggcc
     1981 gcgaggcacc gggcgtgcac aactgaactg aaaagattta tccacagatt tcacagattc
     2041 cacagactgg gttcttgggg ggaaatctgt gtaaatctgt gaaatctgtg gatctatttc
     2101 attgaatcaa tcatccgcaa tgatggcggt ggctggcatt caagagtgag ccaggccccc
     2161 gtgcggggat gttcgagttc cagccggtgg gcatgcagca ggtagcccgg gtcgccgggc
     2221 agggcggtgg tcccgtgccg gggcgtgccg ccggggccgt acagcggatc gcccaccagg
     2281 ggatgccccg cgaaggccaa gtggatgcgg atctggtggg ggcggcccgt gaggatctcc
     2341 acgtccagca gggaggcccc ctccctccgc tccaggacgg tgacgcggct gagggaggga
     2401 cgcccttccg ggcaggcccc gtggaggacg cccagggggc cgtagggcag ctctccgatg
     2461 ggggccgcca cctcgaaggc atcctctgct ggacgcccgc cgcacagggc ccggtagacc
     2521 ttgcgggccc gcggatcctg gaaggcggcc tggagggggc cgcgcgcccc ctccgtgggg
     2581 gcgaacagca ccacgcccga ggttccccgg cccaggcggt gcatggggct ggcctcggga
     2641 tgccgccgcc gcacgagggc caggagcgtg tggtccagga actccccgcc gccgggcagg
     2701 gtgggcaggc cgctgggctt ggccacggcc aggaggtccc cgtcctcgaa caggatggcc
     2761 gtggccaggg gcacctcggg ctcggcccag ggcggccggt cccaggtgag ccactggccg
     2821 gcccggagga tctccccgcc cgtggcgatc cggccgtcga gcagaacctg cccggcctcg
     2881 atccgcgcct gccactcggc ggcggtggct ctgggatgcc gaatgggaag gtg
//
LOCUS       DASUDT010000310         5265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1848746, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000310 DASUDT010000000
VERSION     DASUDT010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5265
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1848746"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..849
                     /locus_tag="VFV26_06315"
     CDS             <1..849
                     /locus_tag="VFV26_06315"
                     /inference="COORDINATES: protein motif:HMM:TIGR01250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline iminopeptidase-family hydrolase"
                     /protein_id="HEX4845816.1"
                     /translation="PRIKLLLLHGGPGSTHEYFESMEGFLPAEGIEFIYYDQLGSARS
                     DQPKDRDLWTTERFVEEVEQVRKALGLDKDNFYLLGHSWGGILAAEYALKYGANLKGL
                     IISNMMMSIPDYNRYAAEVLAKGMDPAVVKEVKELEAKGQYENPRYMELLIPHFYAKH
                     LCRLPEWPDAFKRSSAHANNDIYVLMQGPSEFGASGRLETWDRKADLPKLAMPTLVIG
                     GTHDTMDPAHMKWVSTQVRHGSFLLCPQGSHMSMWDDQRTYHEGLIRFLKETDAGRKT
                     VTFGAP"
     gene            846..1706
                     /locus_tag="VFV26_06320"
     CDS             846..1706
                     /locus_tag="VFV26_06320"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX4845817.1"
                     /translation="MSLRTILPADLSPIEANALLCGGVAPRPIALASTVSADGIRNLS
                     PFSFFNAFGSNPPTVAFAPNRRGRDGTVKHTYLNAVATGEFVIAAVSYAMLHPMNVAS
                     AEWPDGVDEFPKSGLTPLPAQLVKPALVAESPFQMECRLQQVVELGTGPGSGLMLIGE
                     VLAFHVREDCFVDGILHPDVLDLVGRNGGAFYTRASGAAVFQVPKPAGKPLGYDALPG
                     ALKASRVLTANDLGQLANSPGLPDLDAMVRRPGDPEDAEALEHAIQAALARNDSGEAW
                     RLAGLRIQIR"
     gene            1846..3828
                     /locus_tag="VFV26_06325"
     CDS             1846..3828
                     /locus_tag="VFV26_06325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX4845818.1"
                     /translation="MPLRDAEARKTAEAAWRDTEERYLGLFLNSPDAIFWIGVSEDGS
                     FILESINPAQEASLGRPGREILGKPLDAWLPHEIAEPLNANYRRCLDTGHPITYEESA
                     DIGQGLRTYQTLLVPIRNPQGRFHRIVGISTDITDRRRSEEELLERERLFRLLFERSG
                     DANLLIDGSCFVDCNQATVDLLGAAGKSEVLGMHPSELSPPFQPDGRSSKDKADDILA
                     LAHRLGSHHFEWVHRRRDGTDFTVEVLLTAVPWKGKQILHTTWRDRTEARRAEEQRRH
                     LEAQFQQAQKLESLGVLAGGIAHDFNNLLTAILGNLNLAQFNLNPESPAAPFLENAEK
                     TVLKASDLTKQMLAYSGKGRFVVKLHDVNAVVEEMAHLLQVSISKKAVLRLHLAKGLP
                     PIEADGAQFQQVVMNLVTNASEALGDQEGTIAITTGMAELDADFIASTFPAQPMLPGR
                     YITLEVSDTGQGMSPEVLARIFDPFFTTKPTGRGLGLSAMLGILRGHQAGLKIYSEVG
                     RGSSFKAFFPAAPGHASPVEPPEAPEAVPLAGRVLLVDDEAVILDTIGPALEALGLEV
                     VLAQDGLEAVEQFRSDPGAFDLVLMDLTMPRMDGREAFQVMRRLRPGVRVVLSSGYNE
                     QESVQALAGKELAGFLQKPYTLQALRTVLRNAFREG"
     gene            complement(3829..4701)
                     /locus_tag="VFV26_06330"
     CDS             complement(3829..4701)
                     /locus_tag="VFV26_06330"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX4845819.1"
                     /translation="MLFAAGPTLDSFLRWMERTGWTKLQHLLLVALAGLALMLAVKLV
                     ARAVRRAVDDGNDGVTSDAERRAETLGSVLTNTARVAVTAFVLLMVLSEFGVNIGPLV
                     AGAGIAGVALGFGAQSLVKDVISGFFLLMENQFGVGDIVNVDDKHTGTVERMTLRITQ
                     LRDAEGRAHFVPNGSIVRVVVLSKDFARALVDVEVGYGTDPDLAFEVLRAVGQRLHEE
                     RPDQAVEPLEVKGIEILGPSGFVIRTLTKTAPGAQWEVARELRRRILLAFRESGIEIP
                     YPQRVVHHRGGSEE"
     gene            complement(4742..>5265)
                     /locus_tag="VFV26_06335"
     CDS             complement(4742..>5265)
                     /locus_tag="VFV26_06335"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: protein motif:HMM:NF016125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006570 - tyrosine metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase domain-containing
                     protein"
                     /protein_id="HEX4845820.1"
                     /translation="PREWAVHIKRENQITRVFYPFNPLDAVGWKGDLTVWRINVKDIR
                     PILSARYHLPPSAHSTFIANNFVICSFLPRPFEEEEGAMRVPFFHSNIDYDEVLFYSA
                     GHFFSRDGIGPGMMTWHPQGIHHGPHPKAIPLSRTKDRTDEVAVMVDTFRPLKATPAA
                     EMVENQNYWASWK"
BASE COUNT          911 a         1858 c         1680 g          816 t
ORIGIN      
        1 ccccgcatca agcttctcct gctccacggc gggcccggct ccacccacga gtacttcgag
       61 tccatggagg ggttcctgcc cgccgagggc atcgagttca tctactacga ccagctgggc
      121 tccgcccgct cggaccagcc caaggaccgg gacctgtgga ccacggagcg ctttgtggag
      181 gaagtcgagc aggtgcggaa ggccctgggc ctggacaagg acaacttcta cctgctgggc
      241 cactcctggg ggggcatcct ggccgcggag tacgcgctga agtacggcgc caacctcaag
      301 ggcctgatca tctcgaacat gatgatgagc atccccgact acaaccgcta cgccgccgag
      361 gtgctggcca agggcatgga tcccgccgtg gtgaaggagg tgaaggaact cgaggccaag
      421 ggacaatacg agaacccgcg ctacatggag ctgctcatcc cccacttcta cgccaagcac
      481 ctctgccgcc tgccggaatg gcctgacgcc ttcaagcgat cctccgccca cgccaacaac
      541 gacatctatg tgctcatgca gggtcccagc gaattcggcg cctccggccg gctggagacg
      601 tgggaccgca aggccgatct gccgaagctg gccatgccca cgctggtcat cggcggcacc
      661 cacgacacca tggaccccgc ccacatgaag tgggtctcca cccaggtgcg gcacggcagc
      721 ttcctcctct gcccccaggg cagccacatg tccatgtggg acgaccagcg cacctaccac
      781 gagggcctca tccgcttcct gaaggagacg gatgcgggcc ggaagacggt caccttcgga
      841 gccccatgag cctccgcacc atcctgcccg ccgacctctc gcccatcgag gccaacgccc
      901 tgctctgcgg gggcgtggcc ccgcgtccca tcgccctggc cagtaccgta tccgcggacg
      961 gcatccggaa cctgtcgccc ttcagcttct tcaatgcctt cggctcgaac ccgcccacgg
     1021 tggctttcgc gcccaaccgc cggggccgcg acggcaccgt gaagcacacc tacctgaacg
     1081 ccgtggccac gggcgagttc gtcatcgccg ccgtgagcta cgccatgctg caccccatga
     1141 acgtggccag cgccgaatgg cctgacggcg tggacgagtt ccccaagagc ggcctcacgc
     1201 ccctgcccgc gcagctcgtg aagcccgccc tggtggccga aagccccttc cagatggagt
     1261 gccggctgca acaggtggtg gaactgggca cggggcccgg atcgggcctc atgctcatcg
     1321 gcgaagtgct ggccttccac gtgcgggagg actgcttcgt ggacgggatc ctccatcccg
     1381 atgtcctcga cctcgtgggg cgcaatggcg gcgccttcta cacgcgggcc agcggggcgg
     1441 cggtgttcca ggtgcccaag cccgccggga agcccctggg ctacgacgcc ctgcccgggg
     1501 ccttgaaggc cagccgcgtg ctcaccgcca acgacctggg ccagctggcc aacagccccg
     1561 gactgccgga ccttgacgcc atggtccgtc gccccggtga cccggaagac gccgaggcgc
     1621 tggaacacgc catccaagct gccctcgccc ggaacgactc cggggaggcc tggcgtctgg
     1681 cggggctgcg catccagatc cgttgaagcg gcggcccgtg ggggccgtgg cgcttacggc
     1741 ggcgggaatt atcgttatga caggcgaatg tcgatgagaa gggatcttcg agcatccatg
     1801 ccacgccgag ccgccagaac ccttctttcc cgcctgctcc ggtcaatgcc gttgcgcgat
     1861 gccgaagcca gaaagaccgc cgaggccgcc tggcgggata cggaagagcg gtacctgggt
     1921 ctcttcctga attcgccgga cgccatcttc tggatcggcg tctccgagga cggctccttc
     1981 atcctggaaa gcatcaaccc cgcccaggag gcctccctcg gccggcccgg ccgcgagatc
     2041 ctcggaaaac cgctggatgc ctggctcccc catgaaatcg cggagcccct gaatgccaac
     2101 taccggcgct gcctggacac gggccatccc atcacctatg aggaatccgc cgacatcggg
     2161 cagggcctca ggacatacca gaccctgctg gtgcccatcc ggaaccccca gggccggttc
     2221 caccgcatcg tgggcatcag cacggacatc accgaccgcc ggcgttccga ggaggaactc
     2281 ctggagcgcg agcgcctgtt ccgcctcctc ttcgagcgtt ccggggacgc caaccttctg
     2341 atcgacggaa gctgcttcgt ggactgcaac caggccaccg tggacctcct gggcgccgcc
     2401 ggcaaatccg aggtcctggg catgcacccc tcggagctct ctccgccctt ccagcccgac
     2461 ggcaggtcct cgaaggacaa ggcggacgac atcctcgcct tggcccaccg gctgggcagc
     2521 catcacttcg aatgggtcca ccgcaggcgc gatggcacgg acttcaccgt ggaggtgctg
     2581 ctcaccgcgg ttccctggaa ggggaaacag atcctgcaca ccacttggcg ggaccgcacc
     2641 gaagccaggc gcgcggagga gcagcggcgc cacctggagg cccagttcca gcaggcccag
     2701 aagctggaga gcctcggcgt cctggcaggg ggcatcgccc atgacttcaa caacctgctc
     2761 acggccatcc tcgggaacct gaacctggcc cagttcaacc tgaaccccga atccccggcg
     2821 gcccccttcc tggagaacgc ggagaagacc gtcctgaagg cctcggacct caccaagcag
     2881 atgctggcct attccggaaa agggcggttc gtggtgaagc tccacgacgt caacgcggtg
     2941 gtggaggaga tggcccacct gctccaggtg tccatctcca agaaggcggt gcttcgactc
     3001 cacttggcca agggccttcc tcccatcgag gccgacggcg cccagttcca gcaggtggtg
     3061 atgaacctcg tgaccaacgc ctcggaggcc ctgggggacc aggagggcac catcgccatc
     3121 accaccggca tggcggaact ggacgcggac ttcatcgcct cgaccttccc cgcccaaccc
     3181 atgcttccgg ggcgctacat caccttggag gtgagcgaca cgggccaggg catgagccct
     3241 gaggtcctgg cacgcatctt cgatccgttc ttcaccacca agcccacggg ccggggcctg
     3301 ggtctctccg ccatgctcgg catcctgagg ggacaccagg ccgggctgaa gatctacagc
     3361 gaggtcggcc ggggatcctc cttcaaggcc ttcttcccgg cggccccggg ccatgcgagc
     3421 cccgtggagc cccccgaggc gcccgaggcg gtccccctgg ccggtcgggt cctcctggtg
     3481 gatgacgagg ccgtcatcct ggacaccatc ggccccgccc tggaggccct cgggcttgag
     3541 gtggtgctgg cccaggacgg gctcgaagcc gtcgagcaat tccggtccga tcccggagcc
     3601 ttcgatctgg tgctcatgga cctcaccatg ccccgcatgg atggccggga ggccttccag
     3661 gtcatgcgcc gcctgcgtcc tggtgtgcgg gtggtcctca gcagcgggta caacgaacag
     3721 gaatccgtcc aggccctcgc gggaaaggag ctcgccggtt tcctgcagaa gccctacacc
     3781 ctccaggcac tgaggaccgt cctccggaac gccttccgcg aaggctgatc attcttcgga
     3841 gccgccccgg tggtgcacca cgcgctgggg gtagggaatc tcgatgccgg attcgcggaa
     3901 ggccagcagg atgcggcggc gcagctcccg ggccacttcc cattgggcgc cgggcgcggt
     3961 cttcgtgagg gtccggatga cgaagccact gggcccgagg atctcgatgc ccttcacctc
     4021 cagcggctcc acggcctggt ccggccgctc ctcgtgcagc ctctgcccca ccgccctcag
     4081 cacctcgaag gccaggtcag gatcggtgcc gtagcccacc tccacatcca ccagggcccg
     4141 ggcgaaatcc ttggacagca ccaccacgcg aacgatggag ccgttgggaa cgaagtgcgc
     4201 gcggccctcg gcatcccgca gctgggtaat gcgcagcgtc atgcgctcca ccgtgcccgt
     4261 gtgcttgtcg tccacattca cgatgtcgcc caccccgaac tggttctcca tgagcaggaa
     4321 gaacccgctg atgacgtcct tcaccaggct ctgggcaccg aagcccaggg ccacaccggc
     4381 gatgcccgca ccggccacca gggggccgat gttcacgccg aactcggaca ggaccatcag
     4441 cagcacgaag gccgtgacag ccacccgggc cgtgttggtc aggacactgc cgagggtctc
     4501 ggcgcggcgc tctgcgtcgg aggtgacacc atcgttccca tcgtccaccg cccggcgcac
     4561 agcccgggcc accagcttca ccgccagcat cagggccagg cccgccaggg ccaccagcag
     4621 caggtgctgg agcttggtcc agccggtgcg ctccatccag cggaggaagg aatcaagggt
     4681 ggggccggcg gcaaagagca tggacgaacc gtcagaaaca ggttggggaa cggttgggcg
     4741 cctacttcca gctcgcccag tagttctgat tctccaccat ttccgccgcc ggtgtggcct
     4801 tcaggggccg gaaggtgtcc accatgacgg ccacctcgtc cgtgcggtcc ttggtgcggc
     4861 tgagggggat ggccttgggg tggggcccgt ggtggatgcc ctggggatgc caggtcatca
     4921 tcccggggcc gatgccgtcc cgcgagaaga agtggcccgc ggaatagaac agcacctcgt
     4981 cgtagtcgat gttgctgtgg aagaagggca cgcgcatggc gccttcctcc tcctcgaagg
     5041 gccggggcag gaaggagcag atgacgaagt tgttcgcgat gaaggtgctg tgggccgagg
     5101 gcggcaggtg gtaccgggcg ctcaggatgg gccggatgtc cttcacgttg atgcgccaga
     5161 ccgtgaggtc gcccttccag ccgacggcat ccaggggatt gaacgggtag aacaccctgg
     5221 tgatctggtt ctcgcgcttg atgtgaacgg cccattccct cggaa
//
LOCUS       DASUDT010000311         4886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1583485, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000311 DASUDT010000000
VERSION     DASUDT010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583485"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            499..873
                     /locus_tag="VFV26_06340"
     CDS             499..873
                     /locus_tag="VFV26_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4845821.1"
                     /translation="MAVVGPDADLTERILGCAFRVHAVLGCGFLEKVYENALLHELRK
                     SGLAAESQRPIQVHYDGVLVGDYFADILVEGRVILELKAAKSFEGIHIAQTLNYLKAS
                     DLRTALLLNFGTRSLEIKRFLL"
     gene            924..1667
                     /locus_tag="VFV26_06345"
     CDS             924..1667
                     /locus_tag="VFV26_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845822.1"
                     /translation="MDRFGSSKLRIGWTLLCLFLAGLVLMGVRGEQGADGSQLVVFGT
                     QVPLGADSLRAYVLGSIQGVMYWVVSLVVLLGAFVPVSQWTAAAARGERLKGFFAGTG
                     LGFVHGLFLSQVALIPVWVLSWRLLGEAWPPELLRADLHGLLLGLQMLLWAVLLSRLL
                     KSSAGLALLITLLLRELGPRLSFFLDFGQDLGWSAGQVKALEVIVRLLPMAQLPSDPF
                     SPLALPLSIGGPLLLGALAMLLPPGGGRK"
     gene            1672..2811
                     /locus_tag="VFV26_06350"
     CDS             1672..2811
                     /locus_tag="VFV26_06350"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX4845823.1"
                     /translation="MRRGLSFILPVILLGQTAQDPAALRQKLAAIQGRLGQVDQQLAA
                     LKKRRKGVLVEIQGISLQRDRAKAQVEGARLRRDQAQSEVQVISREQARIQGEVLKLQ
                     GGLRKQVRWMQALGPWGDLGMYATFKDLEAWLVRGRMLAWARLQERKRLDQIHRLQGD
                     LAAKEKALKEVLARLASEEREAAQLQAALRLQEEKLNGFLDGLQKDEAAQKQAQSELA
                     EEAVQLERLLAGLLGKPKGEAFEAAVSFASLQGGLPQPVEGTLAQGFGEHLHPRFRTK
                     TVQSGLLIAANGGAPVAAVADGKVAFADYYQSYGPVVILDHGAGWFSLYTHLLGLQVA
                     KGQVLKAGEPVGAVGDTVDGPRLGFEIRHQAQPQDPQKWLKRKYR"
     gene            2869..4038
                     /locus_tag="VFV26_06355"
     CDS             2869..4038
                     /locus_tag="VFV26_06355"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845824.1"
                     /translation="MIPRLAGTTLVEMAQGFPFLALTGPRQSGKTTLARAMFPEKPYV
                     SLEDPDARDFADGDPRGFLAQFPDGAVLDEVQRCPALFSYLQTLSDLDGRPGLFVLTG
                     SQQFGLFSGLSQTLAGRVGLVQLLPFSSEELTVTGSMPPDLDGALSKGMYPPLYDRTL
                     DPGRWFASYVATYVERDVRQMVNVRDLSTFQRFVRLCAGRTGQLLNLSGLASDAGITH
                     NTAKAWVSILEASYLVHLLAPHHENFNKRLVKTPKLYFLDTGLAAWLLGIQEPGQLAT
                     HPLRGPLFETWVVAELLKRRFNRGLPSNLSFWRDRGGREVDVLMDEGTRLVPVEIKAG
                     RTVNADFFAGLKAWTALAGPRAGRGRLVYGGDSPQARSEMEVLSWRNLTGLTAEA"
     gene            complement(4062..>4886)
                     /locus_tag="VFV26_06360"
     CDS             complement(4062..>4886)
                     /locus_tag="VFV26_06360"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX4845825.1"
                     /translation="IYRSNVVAGERSGTMPEVLARWLSFQKFAQHSRRRITEALFYPA
                     FLVLVLILALGVIFNVVLPRFAEFYAGGDIDMPFFTKLLLGMGKAISSTLWLQGLAVI
                     GLIVFARWMAASEAGRKLAERLLLMIPKVGTLYRMYHSSVFSRTLGVLLSGGLPVVQA
                     LEVVQRTSPSERMKAGLLTVTEKVRAGSSLNLALEQAKILDPLATEMVRVGEQSSALP
                     EMLDHVADFFDQEVEKATTAVTSLIGPVLILFMGVVVLALLLAIYMPLFNASSVVQ"
BASE COUNT          788 a         1550 c         1705 g          843 t
ORIGIN      
        1 cacacggatt gaaaaacccg tggttctgtg tgaggtgttc ccaggcatgg gctccagtgg
       61 gggtgctggg atcgcacctt ttggaagcac ggtcccggaa cccccactga cctgcggtgg
      121 gcccatgcgt gttgggccgg cgcacatccg tgcaatccgt gaacctggtt atcggcctga
      181 ctcagccaga aaagcaagca accgcgaatg acgcgaatgg gcgcgaaatg cggcggagat
      241 gggccgcctg ggccttcggc ccccagtcgc gcggtgcgcg gctggccaca cgcgaggcgg
      301 gcatgtcggc tcctgaaggc cgccaggcca gcctcgcatg tggaggcgga agcaggatcg
      361 ttcgccattc gcgcgcccgc agggcgattc gcgtcattcg cggttcgatc attcctggct
      421 gaggctcgcc gataatcaga tccgtgaaat ccgtggctaa tttgaattca cacattcctg
      481 cgaatgaagg aggcagacat ggccgtggta ggcccggatg cagatttgac ggagcggatc
      541 ctcggttgtg ctttccgagt gcatgcagtc ctcggttgcg gctttctgga aaaggtctat
      601 gagaacgcgc tcctgcatga gctgcggaag tccgggctcg ccgccgaatc gcagcggccc
      661 atccaggtcc actacgacgg ggtgctggtg ggagactact tcgcggacat tctggtcgaa
      721 gggcgggtca tcctcgaact caaagccgcc aagagtttcg aaggcattca catcgctcag
      781 accctcaatt acctcaaggc cagcgacctg agaacagctc tgcttctgaa tttcggaacc
      841 cgaagcctgg agatcaagcg gttcctgctc tgagtggact gccgccgggc ccggtatgat
      901 cgttccattc gctgggagcc ctcatggacc gtttcgggag ttcgaagctg cgcatcggct
      961 ggacgctgct ctgcctgttc ctcgcggggc tggtgctcat gggcgtccgg ggcgagcagg
     1021 gggcggatgg gtcgcagctg gtggtcttcg gcacccaggt gcccctgggg gcggattcgc
     1081 tgcgggccta cgtgctgggc agcatccagg gggtgatgta ctgggtggtg tccctggtgg
     1141 tgctgctggg ggcctttgtc cccgtgagcc agtggaccgc cgcggcggcc cgcggcgagc
     1201 gcctcaaggg cttcttcgcg ggcacgggcc tgggcttcgt ccacgggctg ttcctgtccc
     1261 aggtggccct gatccccgtg tgggtgctga gctggcgcct gctgggagag gcctggccgc
     1321 cggaactgct gcgggcggac ctgcatggcc tgctcctggg cctccagatg ctgctgtggg
     1381 ccgtgctgct gtcacggctg ctgaaatcca gcgcgggcct ggcgctgctc atcaccctgc
     1441 tgctccgcga gctgggcccc cggttgagct tcttcctgga tttcgggcag gacctgggct
     1501 ggagcgccgg gcaggtgaag gcgctggagg tcatcgtccg cctgctgccc atggcccagc
     1561 tgccctcgga ccccttctcg ccgctggcgc tgcccctgtc catcggcggc ccgctgctgc
     1621 tgggagccct ggccatgctg ctgccgccgg gtggtggacg gaaatagccg ggtgcgccgc
     1681 ggtctgagct tcatcctccc ggtgatcctg ctgggccaga cggcccagga tccggcggcg
     1741 ctgcgccaga agctcgcggc catccagggg cggctggggc aggtggacca gcagctggcg
     1801 gccctgaaga agcggcgcaa gggtgtgctg gtggagatcc agggcatctc gctgcaacgg
     1861 gaccgggcca aggcccaggt ggaaggcgcc cggctgcggc gggaccaggc ccagagcgag
     1921 gtccaggtca tcagccgcga gcaggcgcgc atccagggcg aggtgctgaa gctccagggg
     1981 gggctccgca agcaggtgcg ctggatgcag gccctggggc cctgggggga cctgggcatg
     2041 tacgccactt tcaaggacct ggaggcctgg ctcgtgcggg gccgcatgct ggcctgggcg
     2101 cgcctgcagg aacgcaagcg cctggaccag atccatcggc tgcaggggga cctggcggcc
     2161 aaggaaaagg ccctcaagga ggtgctggcg cgcctggctt ccgaagagcg ggaggccgcc
     2221 cagctccagg ccgcgctccg gctccaggag gaaaagctca acggcttcct cgacggcctc
     2281 cagaaggacg aagcggccca gaagcaggcc cagtccgagc tggcggagga ggcggtccag
     2341 ctggagcgcc tgctggcggg cctgctgggc aagcccaagg gcgaggcctt cgaggccgcc
     2401 gtgagcttcg cctccctgca gggcggcctg ccccagcccg tggagggcac cctggcccag
     2461 ggcttcggcg agcacctgca cccgcgcttc cgcacgaaga ccgtgcagag cggcctgctc
     2521 atcgcggcca acggcggcgc ccccgtggcc gccgtggccg acggcaaggt ggccttcgcg
     2581 gactactacc agagctacgg gcccgtggtg atcctggacc acggcgccgg gtggttcagc
     2641 ctctacaccc acctcctggg cctccaggtg gccaagggcc aggtgctcaa ggccggggag
     2701 cccgtgggcg ccgtgggcga cacggtggat ggcccccgcc tgggcttcga gatccgccac
     2761 caggcccagc cccaggatcc gcagaagtgg ctgaagcgga aataccggtg aattaggctg
     2821 attgataatt caattgacaa ttagccacat gatcccaaaa ttaggcccat gatcccccgt
     2881 cttgcaggca ccacccttgt ggagatggcc cagggcttcc ccttcctggc cctgacgggg
     2941 ccccggcaat cgggcaagac cacgctggcc cgcgcgatgt ttccggaaaa accctacgtg
     3001 tctctggaag accccgatgc ccgggacttc gccgatgggg atccgcgggg cttcctcgcg
     3061 cagtttccgg atggcgctgt actggatgaa gtgcaacggt gtccagcctt gttctcgtac
     3121 cttcagaccc tgtcggacct ggatgggcgg ccggggctgt tcgtgcttac gggatcccag
     3181 caattcggcc ttttctctgg tttgagccag actctcgccg gacgtgtggg gctggtgcag
     3241 cttcttccct tttcgtccga ggaactgacc gtcaccggtt ccatgccgcc cgatctggat
     3301 ggggccctgt ccaagggcat gtacccgccc ttgtacgacc ggaccctgga cccgggtcgg
     3361 tggttcgcct cctatgtggc aacctatgtg gaacgggacg tgcgccagat ggtgaatgtg
     3421 cgcgatctct ccacgttcca gcggttcgtc cggctgtgcg caggacggac cggccagttg
     3481 ctgaacctgt cgggactggc ctcagatgcc ggcatcaccc acaacaccgc caaggcctgg
     3541 gtctcgatcc tggaagccag ctacctggtg catctgctgg ccccgcatca cgaaaacttc
     3601 aacaagcggc tggtcaagac accgaagctc tacttcctgg acacgggctt ggccgcctgg
     3661 ctcctgggca tccaggaacc gggacaattg gccacccatc ctctgcgggg gccccttttt
     3721 gaaacctggg tggtggccga acttctcaag cgccgcttca accggggact cccctccaat
     3781 ttgtctttct ggcgggaccg cggcgggcgc gaagtggatg tgctgatgga tgaaggcacc
     3841 cgcttggttc cggtggagat caaggccggg cgcaccgtga acgcagattt ctttgccggg
     3901 ctgaaggcat ggaccgcgct cgcaggaccc agagctgggc gaggcaggct cgtctacggg
     3961 ggggactcgc cccaggcaag atcggagatg gaggtgctct cctggaggaa cctcaccggc
     4021 ctcaccgcgg aagcctgaat tccaagggct gagggcaccc tttactgcac cacgctgctg
     4081 gcattgaaca gcggcatgta gatggccagc aggagggcga ggacgacgac gcccatgaag
     4141 aggatgagca cggggccgat gaggctggtg acggcggtgg tggccttctc cacttcctgg
     4201 tcgaagaagt cggccacgtg gtcgagcatc tcgggcaggg cgctgctctg ctcgcccacg
     4261 cggaccatct cggtggccag gggatcgagg atcttcgcct gctccagggc caggttcagg
     4321 ctgctgcccg cgcgcacctt ctcggtcacg gtgagcaggc cggccttcat gcgctcgctg
     4381 gggctggtgc gctgcaccac ttcgagggcc tgcaccacgg gcaggccgcc ggacagcagc
     4441 acgcccaggg tccgggagaa gacgctggag tggtacatgc ggtagagcgt tcccaccttg
     4501 gggatcatca ggagcagccg ttccgccagc ttgcgcccgg cctcggaggc cgccatccag
     4561 cgggcgaata cgatcagtcc gatgacggcc aggccctgga gccagagggt ggagctgatg
     4621 gccttgccca tgcccagcag gagcttggtg aagaacggca tgtcgatgtc gccgccggcg
     4681 tagaactccg cgaagcgggg cagcaccacg ttgaagatca cgcccagggc gaggatcagc
     4741 accagcacca ggaaggcggg atagaacagg gcctcggtga tgcggcggcg gctgtgctgg
     4801 gcgaatttct ggaaggacag ccaccgggcc agcacttcgg gcatggtgcc gctgcgctcc
     4861 cccgccacca cgttgctgcg gtagat
//
LOCUS       DASUDT010000312         5639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_545291, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000312 DASUDT010000000
VERSION     DASUDT010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5639
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545291"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..509
                     /locus_tag="VFV26_06365"
     CDS             156..509
                     /locus_tag="VFV26_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX4845826.1"
                     /translation="MRGYASILLLILVAVALPIIIWNLSWLLRPSWPSAAKYATYECG
                     IATTSEAREKFSVRYYLVAVMFLVFDVETVFLMPWAIQMKELALFGFIELGLFLFLLL
                     FGYGYIWSKGALTWE"
     gene            512..1015
                     /locus_tag="VFV26_06370"
     CDS             512..1015
                     /locus_tag="VFV26_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX4845827.1"
                     /translation="MNQPSTLEHILITTKVEKVMNWSRATSVWPVTFGLACCAIEMMA
                     AGASRFDFDRFGAGIFRATPRQADLMIVAGTVTYKMAPIIKTLYDQMPEPKWVIAMGS
                     CATAGGPFDSYHTVQGVDKVIPVDVYIPGCPPRPESLIYGFLKLQDKIMTSSLADRYK
                     DIFEEVG"
     gene            1015..1893
                     /locus_tag="VFV26_06375"
     CDS             1015..1893
                     /locus_tag="VFV26_06375"
                     /inference="COORDINATES: protein motif:HMM:TIGR01961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX4845828.1"
                     /translation="MTDPNVPQAPEVPEAPAGPYVYDYKAAPNRQIVMPKTVPLPSYR
                     TYLAEQKAAAEADEAKWQKSLADYETAKAKAEAEGKDAPKPPVRPVPRKDDNDLKTPW
                     PQEAKDADLLHLQACLGDKVEEIFEQAGELVCQVAKEAIFEALMLCRDDGKLAYEMLA
                     DQTATHYPAADGFAFSVVYHLTSISRRKRLRLRILVPEGFAPESACAAYPSANWMERE
                     AYDMLGIRFANHPDMTRILCPEDWEGYPLRKDYPTVGWGQRDISFREDRGGMLDRIAL
                     QKAGQLGINLKQPKAE"
     gene            2061..3161
                     /locus_tag="VFV26_06380"
     CDS             2061..3161
                     /locus_tag="VFV26_06380"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX4845829.1"
                     /translation="MFKNEEMEINLGPQHPSTHGVLRVKLRLDGETITHCRPVIGYLH
                     RGVEKICENQSFFQGQVWTDRMDYCSAVANNLGWVEANEKLFGITVPRRAQYIRTMLN
                     EFNRLASHLIWLATHALDIGAMTVFLYAFREREDILDLNEAFCGSRLTTTAFRIGGLR
                     EDLPPGFEKMARKFLAKFPACIEEYENLLSENRIWKKRTIGVAKLNAEDAIAMGVTGP
                     VLRAAGVAYDIRKAFPYAAYAEMDFEVPTRTEADTYARYLVRMAEMRQSARIIQQCLD
                     GMPEGPVMAKLPKILRSEVNEVYHATESPKGEIGYYLVGEKGSLNPYRFHVRAPGFIN
                     LQSLPKMAEGALIADIVAAIGTLDIVLGEIDR"
     gene            3181..4347
                     /locus_tag="VFV26_06385"
     CDS             3181..4347
                     /locus_tag="VFV26_06385"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX4845830.1"
                     /translation="MPTPTLTQSLVITLIQCVLVVIFVFVVVPLTVFAERKVLGYLQQ
                     RLGSTRVASGHVGITGWMNRGMWKWGRIPVLSYWRGIPGLVADVLKLILKEDIIPAKA
                     DKFVFFIAPALSMVAAVVVFAAISFVPGTFFTFPAWFPYVGGLPVSGGIADINVGLLW
                     ILGVASVGVYGIVLAGWASNSKYPLLGGLRSAAQMVSYEVPLALSLLAPVVLSSSLNF
                     SEMSARMATGLPAWALVPQVIGFLLYLTCGFAETNRLPFDMPEAENELVAGFHTEYSG
                     MKFGFFYLAEYINMTVVAALASGFFLGGPWLLPFGLQGLLNPYLPSFLSWFGEPHAIF
                     FVAKIIFILFTYIWVRGTIPRYRYDQVMSVAWKYLIPMTLFNLLLAALVRCFAV"
     gene            4357..4860
                     /locus_tag="VFV26_06390"
     CDS             4357..4860
                     /locus_tag="VFV26_06390"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEX4845831.1"
                     /translation="MNKILRTLIPFDIAKGLAITGKHFSKVFFTANRRKVPFHIVSEY
                     PEVPVKVQPRYRGRLTLLKDEQGEVKCVCCLACEKICPTQVITIEKGKKEGRKMPFPV
                     RYDFEMERCIFCEFCVESCGFDSIILNHQFELATYNREDFSLGMEGLGQNMFEPSPTG
                     KFSVADD"
     gene            4895..5446
                     /locus_tag="VFV26_06395"
     CDS             4895..5446
                     /locus_tag="VFV26_06395"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX4845832.1"
                     /translation="MEHLFETIGRNMFAIFGVMALCGAAFMIASRSAVHSVLGFLFAM
                     LCVAGCFLSMEAEFLGMAQILVYAGGIVVLFLFVVMLVEMSKKKEKEVFQLQSRYAVA
                     AVLIGAAAFVGVFRKVIFGAASPEALVLRPELAKGLDVAHQNAQAVSRGLFADYLLPF
                     EILSVILLVALVGAVVLAKTERV"
     gene            5446..>5639
                     /gene="nuoK"
                     /locus_tag="VFV26_06400"
     CDS             5446..>5639
                     /gene="nuoK"
                     /locus_tag="VFV26_06400"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX4845833.1"
                     /translation="MVNLNAVLLISFLLFSIGIAGVLIRRNALVILMCVELMLNAANL
                     NFIAFARHSGSVSGQAFALLV"
BASE COUNT          948 a         1948 c         1723 g         1020 t
ORIGIN      
        1 ggggattcga aagggccatg ggatcatcct actggaaggt gtgctgggct ggatgaccgg
       61 aatcgggcat gggtcacaat ggatgcagcg gtcggcttcc agcgttgacc cgcccgcgac
      121 ccgcgggcca caattgcttt cgtcctggag gctccatgcg tgggtacgcg tccatcctgc
      181 ttctgatcct ggtagcagtg gccctgccga tcatcatctg gaatttgtcg tggctcctgc
      241 ggcccagctg gcccagtgcc gcgaaatatg cgacctacga atgcggcatc gccacgacca
      301 gcgaggcccg ggagaagttc tccgtccgct actacctggt ggcagtgatg ttcctggtgt
      361 tcgacgtgga aacggtgttc ctgatgccct gggccatcca gatgaaggaa ctggcccttt
      421 tcgggttcat cgaactgggt ctgttcctct tcctgctgct gttcgggtac ggctacatct
      481 ggtccaaggg agccctgaca tgggaatgag catgaatcag ccctccaccc tggagcacat
      541 cctcatcacc accaaggtgg agaaggtcat gaactggtcc cgcgccacca gcgtgtggcc
      601 cgtgaccttc ggcctggcct gctgcgccat cgagatgatg gccgcgggcg ccagccgctt
      661 cgacttcgac cgcttcggcg ccggcatctt ccgggccacc ccccgccagg cggatctgat
      721 gatcgtggcg ggcaccgtga cctacaagat ggcgcccatc atcaagaccc tctacgacca
      781 gatgcccgag cccaagtggg tgatcgccat gggctcctgc gccaccgcgg gcgggccctt
      841 cgattcctac cacacggtcc agggcgtgga taaggtcatc cccgtggatg tctacatccc
      901 gggctgcccg ccccggcccg agtcgctcat ctacgggttc ttgaagctgc aggacaagat
      961 catgaccagc agcctggccg accggtacaa ggacatcttc gaggaggtcg gctgatgacg
     1021 gacccgaacg tcccccaggc cccggaagtc ccagaggccc cggccggccc ttacgtctac
     1081 gactacaagg ccgccccgaa ccgccagatc gtcatgccga agaccgtgcc cctgccgagc
     1141 taccggacct acctggccga gcagaaggcc gccgccgagg ccgacgaggc caagtggcag
     1201 aagtccctgg cggactacga gactgccaag gccaaggccg aagccgaggg caaagatgcg
     1261 cccaagcccc ccgtccggcc cgtgccccgc aaggatgaca acgacctgaa gaccccgtgg
     1321 ccccaggagg ccaaggacgc ggacctcctg cacctccagg cctgcctggg cgacaaggtg
     1381 gaggagatct tcgagcaggc cggggagctg gtctgccagg tggccaagga ggcgattttc
     1441 gaggcgctga tgctctgccg ggacgacggc aagctggcct acgagatgct ggcggaccag
     1501 accgccaccc actatccggc cgcggacggc ttcgccttca gcgtggtcta ccacctgacc
     1561 agcatcagcc gccgcaagcg cctgcgcctg cgcatcctcg tgcccgaggg cttcgcgccc
     1621 gagagcgcct gcgccgccta tcccagcgcc aactggatgg agcgcgaggc ctacgacatg
     1681 ctcggcatcc gcttcgcgaa ccaccccgac atgacccgca tcctctgccc cgaggactgg
     1741 gaaggctacc ccctgaggaa ggactacccc accgtgggct gggggcagcg cgacatctcc
     1801 ttccgggagg accgcggcgg catgctcgat cgcatcgccc tccagaaggc cggccagctg
     1861 ggcatcaacc tgaagcaacc caaggcggag tgagaaatga tccaccacgg agtcacggag
     1921 ggcacagaga tgttcacgaa ggaaagcacg gagaagggat ggggggcgga attccgcact
     1981 gctctctctg tgacctcctc cgtgtttttt ctccgtgatc tccgtgcctc cgtggtgagt
     2041 cttttcaact aggagcgctc gtgttcaaga acgaggaaat ggagatcaac ctgggcccgc
     2101 agcacccgtc cacgcacggc gtgctccggg tgaagctgcg gctggatggc gagaccatca
     2161 cgcactgccg gccggtcatc ggctacctgc accgtggcgt cgagaagatc tgcgagaacc
     2221 agtccttctt ccagggccag gtctggacgg atcgcatgga ctactgctcc gccgtggcca
     2281 acaacctggg ctgggtggaa gccaacgaga agctgttcgg catcacggtg ccccggcgcg
     2341 cccagtacat ccggacgatg ctcaacgagt tcaaccgcct ggcctcgcac ctgatctggc
     2401 tggccacgca cgccctggac atcggggcca tgacggtctt cctctacgcc ttccgcgagc
     2461 gcgaggacat cctggacctc aacgaggcct tctgcggctc ccgcctcacc accacggcct
     2521 tccgcatcgg cggcctgcgc gaggacctgc ctcccggctt cgagaagatg gcccggaagt
     2581 tcctggccaa gttccccgcg tgcattgagg agtacgagaa cctcctcagc gagaaccgca
     2641 tctggaagaa gcgcaccatc ggcgtggcca agctcaacgc cgaggacgcc atcgccatgg
     2701 gcgtcaccgg ccccgtgctg cgcgccgcgg gcgtggccta cgacatccgc aaggccttcc
     2761 cctacgcggc ctacgccgag atggatttcg aggtgcccac ccgcaccgag gccgacacct
     2821 acgcccggta cctggtgcgc atggcggaga tgcgccagag cgcccgcatc atccagcagt
     2881 gcctggacgg catgcccgaa gggcctgtca tggccaagct gcccaagatc ctgaggtccg
     2941 aagtcaacga ggtctaccac gcgaccgagt cccccaaggg cgagatcggg tactacctcg
     3001 tgggcgagaa aggctcgctg aacccctacc ggttccacgt gcgcgccccc ggattcatca
     3061 acctccaatc cctgcccaag atggctgagg gagccctgat cgccgatatc gtggcggcca
     3121 tcggcaccct ggacatcgtg ctcggcgaga tcgaccgcta gccgacgagg atcccaagcc
     3181 atgccgactc cgaccctgac ccagtccctc gtgatcacgc tcatccagtg cgtgctggtg
     3241 gtgatcttcg tattcgtcgt cgtccccctc acggtgttcg ccgagcgcaa ggtgctcggc
     3301 tacctccagc agcgcctcgg ttccacccgc gtggccagcg gccatgtggg catcaccggc
     3361 tggatgaacc gcggcatgtg gaagtggggc cggatcccgg tcctctccta ctggcgcggc
     3421 atccccggcc tggtggccga cgtgctgaag ctgatcctga aggaggacat catcccggcg
     3481 aaggcggaca agttcgtctt cttcatcgcc ccggccctga gcatggtggc cgccgtggtg
     3541 gtgttcgccg ccatctcctt cgtgcccggg accttcttca ccttcccggc ctggttcccc
     3601 tacgtggggg ggctgccggt gtccggcggc atcgccgaca tcaacgtggg cctgctctgg
     3661 atcctgggcg tggccagcgt gggggtctac ggcatcgtcc tcgccggctg ggcctcgaac
     3721 tccaagtatc ccctgctggg cggcctgcgc agcgcggccc agatggtgag ctacgaagtg
     3781 ccgctcgccc tcagcctcct ggcccccgtg gtcctctcct ccagcctcaa tttcagcgag
     3841 atgtcggcgc gcatggccac cgggcttccg gcctgggccc tggtgcccca ggtcatcggc
     3901 ttcctgctct acctcacttg cggcttcgcg gagaccaacc gcctcccctt cgacatgccc
     3961 gaagccgaga acgaactggt ggcgggcttc cacaccgaat attccggcat gaagttcggc
     4021 ttcttctacc tggccgagta catcaacatg accgtcgtgg ccgccctggc ctcgggcttc
     4081 ttcctgggcg ggccctggct gctgcccttc ggcctgcagg gcctgctgaa tccctacctg
     4141 cccagcttcc tgtcctggtt cggcgagccc cacgcgatct tcttcgtggc gaagatcatc
     4201 ttcatcctat tcacctacat ctgggtccgc ggcaccatcc cccgctaccg gtatgaccag
     4261 gtcatgagcg tggcgtggaa atacctgatc cccatgaccc tgttcaacct cttgctggcg
     4321 gccctcgtcc gctgcttcgc cgtctagggg ccgtccatga acaagatcct gaggaccctc
     4381 atccccttcg acatcgccaa gggcctggcc atcaccggca agcacttcag caaggtgttc
     4441 ttcacggcca accggcggaa ggtgccgttc cacatcgtct ccgagtaccc cgaggtgccc
     4501 gtcaaggtcc agccccgcta ccggggccgc ctgacgctgc tcaaggatga gcagggcgag
     4561 gtcaagtgcg tgtgctgcct ggcctgcgag aagatctgcc ccacccaggt gatcaccatc
     4621 gagaagggca agaaggaggg gcgcaagatg cccttccccg tgcgctacga cttcgagatg
     4681 gagcgctgca tcttctgcga gttctgtgtg gagagctgcg gtttcgactc catcatcctc
     4741 aaccaccagt tcgagctggc cacctacaac cgcgaggact tctcgctggg gatggagggc
     4801 ctgggccaga acatgttcga gccctcccct acgggcaagt tcagcgtggc tgacgactga
     4861 ttccaatccc ttcgcgcatt tccgaggacg ccccatggaa catctattcg aaacgatcgg
     4921 ccggaacatg ttcgccatct tcggcgtcat ggccctctgc ggcgccgcgt tcatgatcgc
     4981 ctcccggagc gccgtgcaca gcgtgctcgg cttcctcttc gcgatgctgt gcgtggcggg
     5041 gtgcttcctc tcgatggaag cggagttcct gggcatggcc cagatcctgg tctacgccgg
     5101 cggcatcgtc gtgctcttcc tcttcgtggt catgctcgtc gagatgagca agaagaagga
     5161 gaaggaggtc ttccagctgc agtcgcgcta cgcggtggcg gcggtcctga tcggcgcggc
     5221 ggccttcgtg ggcgtcttcc gcaaggtgat cttcggggcc gcctcgcccg aagccctggt
     5281 cctgcggccc gagctggcca aggggctgga tgtggcccat cagaatgccc aggccgtcag
     5341 ccgcggcctg ttcgccgact acctcctgcc cttcgagatc ctcagcgtga tcctgctggt
     5401 ggccctggtg ggcgcggtgg tgctggcaaa aacggagcgg gtgtgatggt caacctgaac
     5461 gcggtcctcc tcatctcctt cctgctgttc tccatcggca tcgcgggcgt cctcatccgc
     5521 cgcaacgccc tggtgatcct catgtgcgtg gagctcatgc tcaacgccgc gaacctgaac
     5581 ttcatcgcct tcgcccgcca cagcggctcc gtctccggcc aggccttcgc gctgctggt
//
LOCUS       DASUDT010000313         2388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_412738, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000313 DASUDT010000000
VERSION     DASUDT010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412738"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VFV26_06405"
     CDS             <1..200
                     /locus_tag="VFV26_06405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845834.1"
                     /translation="PGLTPDVLGDIYVYRPSFTEIAVAAGIFATGFLAFTLMLKAAVP
                     MMLGEFTITRRGPRAEVPPPA"
     gene            complement(214..1296)
                     /locus_tag="VFV26_06410"
     CDS             complement(214..1296)
                     /locus_tag="VFV26_06410"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4845835.1"
                     /translation="MGEDFQVVPQQVRVLIVDDVPIIRLSLQRILAKAGYHCREAEDV
                     PQALKALEEEAADLVLCDIQMPGASGLDLVKALQPRIPDTSVVMVSSTEDAETAIECL
                     QQGAFGYVLKPFQPREILVQVNAALRRRMLEIAFRDREAQLARKVREQTEEIRNSREE
                     VALRLIAASEHRDHETGSHVRRIGLYAAEMADLLGWSQERIDAIRSAAPMHDIGKIGV
                     PDAILQKPGALTDEEWITMRRHTSMGATILKGSAVPFIQMGARIAIGHHEKWDGTGYP
                     KGLAGEAIPIEARITTLVDVFDAASSRRHYKESWPEGQVIELIQKGSGVHFDPSLVAL
                     FLANLERFRKILADNPDEAEDETDEL"
     gene            complement(1422..1868)
                     /locus_tag="VFV26_06415"
     CDS             complement(1422..1868)
                     /locus_tag="VFV26_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845836.1"
                     /translation="MAKRNEPVRKSVKDVLEDLLAGHRESAFNGPESALKYLRRTFEG
                     QASLPNAVKAVAYDLAADAQAQSGQWEDCAASVDTALGYLPDLEAAFPHEYRRMLEGM
                     ACLERGIQAHSELGDFHAALELCERAIALELGAHYTAKRDSLEWAR"
     gene            complement(1986..>2388)
                     /locus_tag="VFV26_06420"
     CDS             complement(1986..>2388)
                     /locus_tag="VFV26_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX4845837.1"
                     /translation="LPEEMNQRHPFPGPGLAVRLPGAITRERATILQNADAIFMQELK
                     ESGWYRKTSQAFAVLLPVQTVGIMGDERTFEWMCALRAVTSEDFMTADWARLPHELMD
                     RIAQRIVREVKGINRVVYDITSKPPATIEYE"
BASE COUNT          378 a          814 c          762 g          434 t
ORIGIN      
        1 tccccggcct cacgcccgac gtgcttgggg acatctacgt ctaccgccca tccttcacgg
       61 aaatcgccgt ggccgcggga atcttcgcca ccggcttcct ggccttcacc ctgatgctga
      121 aggccgcggt gcccatgatg ctgggtgagt tcaccatcac caggcggggc ccccgggcgg
      181 aggtgccgcc tccggcctag catctgcccc ggcctaaagt tcgtcggtct cgtcctcggc
      241 ctcatccgga ttatccgcga ggattttccg gaaccgctcc aggttggcca ggaacagcgc
      301 caccagactc gggtcgaagt ggacaccgct gcccttttgg atcagctcga tgacctgccc
      361 ttcgggccag gattccttgt agtgccgccg gctgctcgcc gcgtcgaaca catccaccag
      421 ggtcgtgatg cgggcctcga tggggatggc ctcgcccgcc agccccttgg ggtagcccgt
      481 gccatcccat ttctcgtggt ggccgatggc gatgcgagcc cccatctgga tgaagggcac
      541 cgcggagccc ttcaggatgg tggcgcccat gctggtgtgc cgccgcatgg tgatccattc
      601 ctcatccgtg agggccccgg gcttctggag gatggcgtcc ggcacgccga tcttcccgat
      661 gtcgtgcatg ggcgcggcgg accggatcgc atcgatgcgc tcctggctcc agcccaggag
      721 gtccgccatc tcggccgcat agaggccgat gcgccgcaca tggctgccgg tttcatgatc
      781 ccggtgctcg ctggccgcga tgaggcgcag ggccacctct tcccgggagt tccggatctc
      841 ctcggtctgc tcacggacct tccgggccag ctgggcttcc cggtcccgga aggcgatctc
      901 cagcatgcgc cggcgcaggg cggcgttcac ctgcaccagg atttcccgcg gctggaaggg
      961 cttcagcaca tagccgaagg cgccctgctg gaggcactcg atggccgtct ccgcgtcttc
     1021 ggtggagctc accatgacca cggacgtatc gggtatccgg ggctggaggg ccttcaccag
     1081 gtcgagcccc gatgccccag gcatctggat gtcgcagagc accaggtccg cggcctcttc
     1141 ctccaaggcc ttcagcgcct gcggcacatc ctccgcctca cggcagtggt agcccgcctt
     1201 ggccaggatc cgctgaaggg acaaccggat gatgggcaca tcatccacga tcaggacgcg
     1261 gacctgctgc ggaaccacct ggaaatcctc gcccatggcc ctcccctgga tccatcttca
     1321 acggctcatg gaccggatga gtgtagttcc tgatgatcgc acaggcataa aaaaccggcc
     1381 aacccgcgcc tgaagcaact tcggatgttc cagagcccgg gtcagcgggc ccactcgagg
     1441 gaatcgcgct tggccgtgta gtgggcgccc agctccaggg cgatggcccg ctcgcagagt
     1501 tccagcgccg cgtggaaatc ccccagctcg ctgtgggcct ggatgccccg ctccaggcag
     1561 gccatcccct ccagcatccg ccggtattca tgggggaagg cggcctccag gtccggcagg
     1621 tagcccaggg ccgtgtccac cgaggccgcg cagtcctccc actgcccgct ctgggcctgg
     1681 gcatccgcgg ccaggtcgta ggcgacggcc ttgacggcgt tgggcaggct ggcctgtccc
     1741 tcgaaggtgc ggcgcaggta cttcagggcg gactcgggcc cgttgaaggc cgactcgcgg
     1801 tgccccgcca gcagatcctc cagcacatcc ttcaccgact tgcggacggg ttcattgcgc
     1861 ttggccattg atttcctaac aaggaaaagc atttgaaacc gcagatgccg cagatggccg
     1921 cagataaagg agaaaaaaca tcctgctttt catctgcgca atctgcgtca tctgcggtta
     1981 aaaactcatt cgtattcgat cgtcgcgggc ggcttggacg tgatgtcgta gaccacgcgg
     2041 ttgatgccct tcacctcgcg gacgatgcgc tgggcgatgc ggtccatcag ctcgtggggg
     2101 agccgcgccc agtcggcggt catgaagtcc tccgacgtca cggcccgcag ggcgcacatc
     2161 cattcgaagg tgcgctcgtc gcccatgatg cccacggtct gcaccggcag cagcacggcg
     2221 aaggcctggc tggtcttgcg ataccagccg ctctccttca attcctgcat gaagatggca
     2281 tcggcgttct ggaggatggt ggcccgctcc cgggtgatgg cgccgggcag gcgcacggcc
     2341 aggccgggac ccgggaaggg atggcgctgg ttcatctcct cgggcagg
//
LOCUS       DASUDT010000314         4830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1163965, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000314 DASUDT010000000
VERSION     DASUDT010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4830
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163965"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VFV26_06425"
     CDS             complement(<1..1123)
                     /locus_tag="VFV26_06425"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4845838.1"
                     /translation="MELFERAAYYGLNSVLAVYLTNQVSAGGLGFTEQSVGFLQSLIY
                     AITYVVPIAGGALADRYGYRRMLLFAFSILSAGYFIAGNVTTYGAVFAALLVMATGAG
                     LFKPIISGTLARTTTEENSGFGFGIYYWMINIGAFLAPLIVSVLKGFSWRYVFIASAL
                     YCAAMLVPTVFLFKDPPKPANTKSLREVAHGAAMVLGDARFMLMIVVYSGFWILYFQN
                     FGSVLWYLRDFVDATPVNAFFASLGIPLKFDAEHVTVVNGGTIILLQVIVSRLVKNVR
                     PLPTMVTGIVIGTIGFLCLAASTNAWVFILGISIFSIGEMTAHPKYYSYVGLVAPQDK
                     KAVYMGYAFLYGVIGSLIGSSLGGMLYGSMLKPLVGQAGG"
     gene            complement(1236..1517)
                     /locus_tag="VFV26_06430"
     CDS             complement(1236..1517)
                     /locus_tag="VFV26_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845839.1"
                     /translation="MILILEMSLSREEFLRLLPGAVGLPAVAEEGSLFQHADGDRRWA
                     IRLEPLGDRRLGPMSLPRHRVEIRLEGFGEKEAEAFMARFHRGFQRGGG"
     gene            complement(1514..1768)
                     /locus_tag="VFV26_06435"
     CDS             complement(1514..1768)
                     /locus_tag="VFV26_06435"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX4845840.1"
                     /translation="MKITLKLFASLAVHLPVEARSRHRMDLEVEAGTTVAEVIQRQGI
                     PPGQCAIVLVDGVWLAAAGQATRALAEGEVLAIWPPVAGG"
     gene            complement(1765..3009)
                     /locus_tag="VFV26_06440"
     CDS             complement(1765..3009)
                     /locus_tag="VFV26_06440"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4845841.1"
                     /translation="MRHLIIGSGPAGVTAAETLRKADPAAEITLLCGEGEPPYSRMAI
                     PYLLKGDIAEAGTHLRQDAGHYDRLRIQLVQARARAIDTAGRTVDLGGGRSLAYDRLL
                     IATGSRPSRETILGMDLPGVHSCWTLEDARALLAQARPGTRVVQMGAGFVGCIIMEGL
                     LSRGVDLTILVRSGYMVRRMMNPTASGLIRKWCEGRGVKILTRTQPQGLSLKDRVLQV
                     DLGEGRVLPADLYLSAVGVDPNLGFLDGSGIETGQGILVDGTLQSSVQGVYAAGDVAE
                     ATDCLTGRRQLNAIQPNAVEQGRIAALNMAGRPAQFRGSFVFNVLTTLGLVSSSFGEW
                     QGVPGGESAEALDEARFRYLNLQFDGDRLVGANCVGFADHVGAFRGLIEGRVRLGRWK
                     QRLLDDPTQIMKAYLAAAHQVA"
     gene            complement(3025..>4830)
                     /locus_tag="VFV26_06445"
     CDS             complement(3025..>4830)
                     /locus_tag="VFV26_06445"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEX4845842.1"
                     /translation="TCTTEPLNMQWAQDYLGQRGLATKYLVSEIDPKVDPFSPENKLI
                     FVTGPLTGTMAATGGRYSVVTKGPLTGAIACSNSGGYFGAELKFAGWDMVIFEGASPK
                     PVYLLITDEKAELVDAAHLWGRTVWDTEETIKLQHQDPQIRVAAIGRAGENRVLYAAI
                     VNDLHRAAGRSGVGAVMGSKNLKAVAVRGTRTDAYHLADPEGFFAATEAGKKVLAANG
                     VTGQGLPTYGTQVLMNVINELGALPTRNHRDVQFEGAHDISGEAMHEKRPTDGKANLV
                     TNGACFGCTIACGRISRMDPGHFSVKDKPQYHGASGGVEYEAAWALGAANGVKDLEAL
                     TYANFLCNEDGFDPITFGATVGAAMELYEMGVLTEEETGLKMPFGSTEALVKLAEMTA
                     RGDGFGKVMGLGSKRLCAKYGHPELSMTVKSQEFPAYDGRALQGMGLAYATSNRGACH
                     LRGYMVSPEVLGIPVKMEPQATEGKPAMLKAFQDLTAVVDSAGICLFTTFAWGLADIQ
                     PQLQTACEGDWSEERLLLVGERIWNLERQFNLAAGLTAKDDNLPPRLMKEPAKTGPQK
                     GAVSKLDLMLPEYYQVRGWTPEGVPTAETRSRLGV"
BASE COUNT          770 a         1613 c         1693 g          754 t
ORIGIN      
        1 ggccgccggc ctggcccacc aggggcttca gcatggagcc gtagagcatg ccgcccaggc
       61 tggagccgat gaggctgccg atgacgccgt agaggaaggc gtagcccatg tagacggcct
      121 tcttgtcctg gggggcgacg aggccgacgt agctgtagta cttcgggtgg gccgtcatct
      181 cgccgatgga gaagatcgag atgccgagga tgaagaccca ggcattggtg gaggcggcca
      241 ggcagaggaa gccgatggtg ccgatgacga tgcccgtcac catggtgggc aggggccgga
      301 cgttcttcac caggcgactg acaatgacct gcagcaggat gatggtcccg ccgttgacca
      361 ccgtgacgtg ctcggcatcg aacttcaggg ggatgcccag ggaggcgaag aaggcgttca
      421 ccggggtggc atccacgaag tcgcgcaggt accagagcac ggatccgaag ttctggaagt
      481 agaggatcca gaagccggag tagaccacga tcatcagcat gaagcgggcg tcgcccagca
      541 ccatggccgc gccgtgcgcg acttcgcgca ggctcttggt gttggcgggc ttcggcggat
      601 ccttgaacag gaagaccgtg ggcaccagca tggccgcgca gtagagggcc gaggcgatga
      661 agacgtagcg ccaggagaag cccttcagca cgctcacgat gaggggcgcc aggaaggccc
      721 cgatgttgat catccagtag tagatgccga agccgaaccc ggagttctcc tcggtggtgg
      781 tccgggccag cgtccccgag atgatgggct tgaacaggcc cgccccggtg gccatcacca
      841 ggagcgccgc gaacacggcc ccgtaggtgg tgacgttccc ggcgatgaaa taccccgccg
      901 acaagatcga gaaggcgaag agcagcatgc gccggtagcc gtagcggtcc gccagggcgc
      961 cgcccgcgat gggcaccacg taggtgatgg cgtagatcag gctctggagg aagcccacgg
     1021 actgttccgt gaagcccagg ccgcccgcgg acacctggtt cgtgaggtag accgccagga
     1081 ccgagttcag gccgtagtac gcggcccgct cgaagagctc catgacgttc gccagccaga
     1141 agaccggcgg aaaggatcgg aggattccag tggggcgctg agtttgcatc cggggattat
     1201 acgggacttc cccgggacct ccccgggaag aatcgctacc ccccgccccg ctggaagccc
     1261 cggtggaagc gggccatgaa ggcttccgcc tccttttccc caaagccctc caggcggatc
     1321 tccacccggt ggcggggcag gctcatcggg cccaggcggc gatccccaag gggctcaagc
     1381 cggatcgccc agcgccggtc cccatcggcg tgctgaaaga ggctcccttc ttccgccacc
     1441 gccggcaggc ccaccgcccc cggcagcaag cgcaggaatt cctcccggct gaggctcatc
     1501 tccaggatca ggatcatcca cccgccaccg ggggccagat ggccaggacc tcgccctcgg
     1561 ccagcgcccg cgtggcctgc ccggccgcgg ccagccagac gccatccacc agcacgatgg
     1621 cgcactggcc cgggggaatg ccctgccgct ggatcacctc agccacggtg gttccggcct
     1681 ccacctccag gtccatgcgg tggcgggacc gcgcctccac cggcaggtgg acggccaggg
     1741 aggcgaagag cttgagggtg atcttcatgc cacctggtgg gccgcggcca ggtaggcctt
     1801 catgatctgg gtggggtcat ccagcaggcg ctgcttccac cggcccagcc tcacccggcc
     1861 ctcgatgagc ccccggaagg cgcccacgtg gtcggcgaag cccacgcagt tggcgcccac
     1921 gagccggtcg ccgtcgaact gcaggttcag gtaccggaag cgggcctcat ccagggcctc
     1981 ggcggattcc ccgccgggaa cgccctgcca ctccccgaag gacgaggaca ccaggccgag
     2041 ggtggtgagc acgttgaaga cgaagctgcc gcggaactgg gcaggccttc cggccatgtt
     2101 cagcgccgcg atgcgcccct gctccacggc gttgggctgg atggcgttga gctgccgccg
     2161 gcccgtgagg cagtccgtgg cctcggccac gtcccccgcc gcgtagacac cctggacgct
     2221 gctctgcagg gtgccatcca ccaggatccc ctggccggtc tcgatgccgc tgccgtccag
     2281 gaaccccagg ttggggtcca cgcccacggc gctgaggtac agatccgcgg gcaggacgcg
     2341 gccttcaccc aggtccacct ggaggacgcg gtccttgagg ctgagcccct gcggctgggt
     2401 gcgggtgagg atcttcaccc ccctgccctc gcaccatttg cggatgagcc cgctggcggt
     2461 ggggttcatc atgcggcgca ccatgtagcc gctgcggacg aggatggtga gatccacccc
     2521 ccgcgacagc aggccctcca tgatgatgca gcccacgaag cccgcgccca tctggacgac
     2581 gcgggtgccg gggcgggcct gggcgaggag ggcgcgggcg tcctccagcg tccagcagct
     2641 gtggacaccc ggcaggtcca tgcccaggat cgtctcccgg ctggggcgcg agccggtggc
     2701 gatgagcagc cggtcgtagg ccaggctgcg tccgccgccc aggtccacgg tgcggccggc
     2761 cgtgtcgatg gccctggcgc gggcctgcac cagctggatg cgcaggcggt cgtagtggcc
     2821 ggcgtcctgg cgcaggtggg tgccagcctc cgcgatgtcc cccttcagca ggtaggggat
     2881 ggccatgcgg gagtagggcg gctccccctc gccgcagagc agggtgatct ccgcggcggg
     2941 gtcggccttg cgcagagtct ccgcggccgt cacccccgcg ggtccgcttc cgatgatgag
     3001 gtgccgcata tgagcctgcg ccgttcatac gccgagacgc gaacgcgtct cggcggtagg
     3061 aacaccctcg ggtgtccaac cacggacttg gtagtactcg ggcagcatga ggtcgagctt
     3121 ggacacggcg cctttctgcg ggccggtctt ggcgggttcc ttcatgagcc gcgggggcag
     3181 gttgtcatcc ttggccgtga ggcctgcggc caggttgaac tggcgttcca ggttccagat
     3241 ccgctcgccc accagcagca gccgctcctc ggaccagtcg ccttcgcagg cggtctggag
     3301 ctgcggctgg atgtccgcca ggccccaggc aaaggtggtg aagaggcaga tgccggcgga
     3361 atccaccacg gcggtgaggt cctggaaggc cttcagcatg gcgggcttcc cttccgtggc
     3421 ctggggctcc atcttcacgg ggatgcccag cacctcgggg gacaccatgt agccgcgcag
     3481 atggcaggcg ccgcggttgc tggtggcata ggccaggccc atgccctgga gggcgcggcc
     3541 gtcgtaggcc ggaaactcct ggctcttcac ggtcatggac agctcgggat ggccgtactt
     3601 cgcgcagagc cgcttggagc caaggcccat gaccttgccg aagccatcgc ccctggcggt
     3661 catttccgcc agcttgacca gggcctccgt ggagccgaag ggcatcttga ggcccgtttc
     3721 ctcctccgtg agcacaccca tctcgtagag ctccatggcc gcgcccacgg tggccccgaa
     3781 ggtgatggga tcgaagccgt cctcgttgca gaggaagttg gcgtaggtga gggcctccag
     3841 gtccttcacg ccattggcgg cccccagggc ccaggccgcc tcgtactcca cgccgccgga
     3901 ggcaccgtgg tactggggct tgtccttgac gctgaagtgg ccgggatcca tgcgggagat
     3961 gcgcccgcag gcgatggtgc agccgaagca ggcgccgttg gtgacgaggt tcgccttgcc
     4021 gtccgtgggc cgcttctcgt gcatggcctc gccggagatg tcgtgggcgc cctcgaactg
     4081 cacatcccga tgattgcggg ttggcagcgc ccccagctca ttgatgacgt tcataagtac
     4141 ctgcgtgccg taggtgggga gcccctgccc cgtcaccccg ttggccgcca gcaccttctt
     4201 cccggcctcg gtggccgcga agaagccttc gggatcggcc agatggtagg cgtccgtgcg
     4261 ggtgccgcgc acggccacgg ccttgaggtt cttggagccc atgacggcgc ccacgccgga
     4321 ccggcccgcg gcccggtgaa ggtcgttcac gatggccgcg tagagcacgc ggttctcgcc
     4381 cgcccggccg atggccgcca cgcggatctg gggatcctga tgctgcagct tgatcgtctc
     4441 ttccgtgtcc cagacggtcc tgccccagag gtgggcggcg tccaccagct cggccttttc
     4501 atcggtgatg aggaggtaga cgggcttcgg agaggccccc tcgaagatca ccatgtccca
     4561 gcccgcgaac ttcagctcgg cgccgaagta gcccccggag ttggagcagg cgatggcgcc
     4621 cgtcagcggt cccttggtga ccacggagta gcgcccgccc gtggcggcca tggtgcccgt
     4681 gagcgggccc gtcacgaaga tgagcttgtt ctcgggggag aagggatcga ccttcggatc
     4741 gatctcggac acgagatact tggtggcgag gccccgctgg cccaggtagt cctgggccca
     4801 ctgcatgttc agcggctccg tggtgcaggt
//
LOCUS       DASUDT010000315         3608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_235923, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000315 DASUDT010000000
VERSION     DASUDT010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235923"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..301)
                     /locus_tag="VFV26_06450"
     CDS             complement(5..301)
                     /locus_tag="VFV26_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845843.1"
                     /translation="MIVHDLDDLILESDEESGIQELGRRFLARGPWTTVAFLVKTKTD
                     PEGDWAGPFLWLHRYQKVAQGWKLVSRFRTTETAQLEKLGEALEGWKGYFSADR"
     gene            331..1557
                     /locus_tag="VFV26_06455"
     CDS             331..1557
                     /locus_tag="VFV26_06455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HEX4845844.1"
                     /translation="MRIECIAIGTELLTTRRLDTNSVWLGERLAALGLAFHRKTAVGD
                     SHEDLAGLFREALTRSDLIITTGGLGPTFDDFTKECFAEVLGVDLREDAQSREDMLAF
                     YAARKRVPPASNFKQALLPAGAEALRNPVGTAPGVWWQDPPAHPGVRIVMLPGVPREM
                     KRMWEEQVEPRLRALAGAPVHTLRMVVAGVPESALDERTRDVRERHGHLDWTILASLT
                     QVELLARGTDPAALEAARMDFLPVLGEDLVGVGTDNLEDVVLAGLKARGESLAVAESM
                     TGGLLAARLSAIPGASEAFLGGATVYSATAKAALLGLDAGRLAREGTVSESTSRALAE
                     SVRTRLAATWGLGLTGNAGPGAEGEAPVGTVFIALAGPGGTVCQSYTLPGDRADVQLR
                     STAWALDLLRRAIRNG"
     gene            1573..2196
                     /gene="plsY"
                     /locus_tag="VFV26_06460"
     CDS             1573..2196
                     /gene="plsY"
                     /locus_tag="VFV26_06460"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX4845845.1"
                     /translation="MPSGSQPLILGCLAAFLCGSIPFGLLLVKLAGKGDVRAHGSGNI
                     GATNVSRVGGKALGIVTLLLDILKGFLPVFLARQAGLGDGALSLVALAAVLGHVFTPW
                     LKFQGGKGVATALGVALAFRASMVVPPLAVFLVLVLAFRYVSLGSVAAAAALPATLLM
                     RGGPVAVVLPWTALALLVIVKHHDNIRRLLKGTESPLWGAKKESANV"
     gene            2189..3190
                     /locus_tag="VFV26_06465"
     CDS             2189..3190
                     /locus_tag="VFV26_06465"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX4845846.1"
                     /translation="MSSRADIGVFGSGAWGTALAITWARAGAKVALWGSFPDEMAQMA
                     ATRRHLRLKDVAFPDGLETSDDPSAAFAAPLWISAMPTQVTPEAWRALRPQAPRAPEL
                     VIHVSKGILQSTHQTLSQALTGVLDVPVGALSGPTFADEVARGVPSAIVLALPGTVSD
                     ERATALQAQLASEKLRIYLSRDVLGTELCGALKNVLAIAAGLVDGLQLGYNARAALIT
                     RGLAEMARLVEVLGGQPATVMGLAGMGDLLLTATGPQSRNRTFGELVGKGNSVETARD
                     ALGGQVIEGMFTTEAALALAGEHGLDLPIAAEVQRLLNGERPEEAVRRLMTRSLKSE"
     gene            3200..>3608
                     /locus_tag="VFV26_06470"
     CDS             3200..>3608
                     /locus_tag="VFV26_06470"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX4845847.1"
                     /translation="MATPFRFRILQHGEAGSPVRESFSPAEPRPGWVRLALKAMALNH
                     LDLWTTFGLPGFPLPLPLTPGCDGAGTVEAVGEGTVLPPGVVAGGSVMIAPGLSCGVC
                     PACLRGDDMLCPGYGVLGHVCDGTAATHVLVPAA"
BASE COUNT          464 a         1281 c         1302 g          561 t
ORIGIN      
        1 agcgctacct gtccgcgctg aagtagccct tccagccttc cagtgcttcc cccagctttt
       61 ccagctgggc ggtttccgtg gtgcggaagc ggctcaccag cttccagccc tgggccacct
      121 tctggtagcg gtgcagccac aggaaggggc ccgcccagtc cccttcggga tcggtcttcg
      181 tcttcaccag gaaggccacc gtggtccagg ggccccgggc gaggaagcgg cggcccagct
      241 cctggatgcc ggactcctcg tcggattcca ggatcaggtc gtcgagatca tgcacgatca
      301 tgcgggctcc ttctggggca tgattctacg atgcgcatcg aatgcatcgc catcgggacg
      361 gaactcctca ccacgcggcg cctggacacc aactccgtgt ggctgggcga gcggctggcc
      421 gccctgggcc tggctttcca tcgcaagacc gccgtggggg acagccacga ggacctggcc
      481 ggactgttcc gcgaggcgct gacgcgctcg gatctcatca tcaccaccgg gggcctgggc
      541 cccaccttcg atgacttcac gaaggaatgc ttcgcggagg tcctgggagt ggatctgcgc
      601 gaggacgccc agagccggga ggacatgctg gccttctacg ccgcccggaa gcgggtgccg
      661 cccgcttcga acttcaaaca ggccctgctg cccgccgggg cggaggcgct ccgcaacccc
      721 gtgggcactg cccccggcgt gtggtggcag gatccgccgg cccatcccgg cgtgcgcatc
      781 gtgatgctgc cgggggtgcc ccgggagatg aagcgcatgt gggaggagca ggtggagccc
      841 cgcctgcggg ccctggcggg ggcccccgtg catacgctgc gcatggtcgt ggccggggtt
      901 cccgagagcg cgttggacga gcgcacccgc gatgtccgcg agcgccacgg gcacctggac
      961 tggaccatcc tcgccagcct cacccaggtg gagctgctgg cccggggcac ggacccggcg
     1021 gccctggagg ccgcccgcat ggacttcctg ccggtgctgg gggaggatct cgtgggcgtg
     1081 gggacggaca acctggagga tgtggtgctg gctggattga aggcccgcgg ggaatccctg
     1141 gccgtggcgg aaagcatgac cggcggcctg ctggcggccc gcctttcggc cattcccggt
     1201 gccagcgaag ccttcctcgg tggcgccacg gtctattccg ccacggccaa ggccgcgctc
     1261 ctgggcctgg atgctgggcg cctggcccga gaggggacgg tgtctgaatc caccagccgc
     1321 gcgctggcgg aatccgtgcg caccaggctc gccgccacct ggggcctggg cctgacgggg
     1381 aatgcgggcc ccggcgccga aggcgaggct cccgtgggca ccgtgttcat cgccctggcc
     1441 gggcccgggg gcaccgtctg ccagtcgtac accctgccgg gcgaccgggc ggatgtgcag
     1501 ctgcgcagca cggcctgggc gctggacctg ctgcgccggg ccatccggaa cggctgatac
     1561 actgcatcca tgatgccttc cggttcccaa cccctgatcc tcgggtgcct cgccgccttc
     1621 ctctgcggca gcatcccctt cggcctcctg ctggtgaagc tggcgggaaa gggcgatgtc
     1681 cgggcccatg gcagcggcaa catcggggcc accaacgtga gccgcgtggg cggcaaggcc
     1741 ctgggcatcg tcaccctgct gctggacatc ctgaagggtt tcctgccggt attcctggcc
     1801 cggcaggcgg gcctgggcga tggggcgctg tcgctcgtgg cgctggcggc ggtgctgggc
     1861 catgtcttca cgccgtggct gaagttccag ggcggcaagg gagtggccac ggccctgggt
     1921 gtggccctgg ccttcagggc ctccatggtg gttccgcccc tggcggtctt cctggtcctg
     1981 gtgctggcct tccgctatgt gagcctgggc agcgtggccg cggcggcggc cctccccgcc
     2041 accctcctca tgcggggcgg gcccgtggcc gtggtgcttc cctggacggc cctggccctg
     2101 ctggtgatcg tgaagcatca cgacaacatc cggcgcctgc tcaagggcac cgaatcgccg
     2161 ctttggggcg ccaagaagga gagtgcgaat gtctagccgg gccgatatcg gcgtcttcgg
     2221 ttccggcgcc tggggcacgg ccctggccat cacctgggcc cgggcgggcg cgaaggtcgc
     2281 gctctggggc agcttccccg acgagatggc ccagatggcg gccacccggc ggcacctgcg
     2341 cctgaaggat gtggccttcc cggatgggct ggagacctcg gacgatccct ccgcggcctt
     2401 tgccgcgccc ctgtggatct ccgccatgcc cacccaggtg acgcccgagg cctggcgcgc
     2461 cctgcgtccg caggcgccca gggcccccga gctggtgatc catgtgagca agggcatcct
     2521 ccagagcacg caccagaccc tctcccaggc cctcacgggc gtgctggatg tgcccgtggg
     2581 cgccctgtcc gggcccacct tcgccgacga ggtcgcccgg ggcgtcccct ccgccatcgt
     2641 gctggcgctg cctgggacgg tctccgatga acgcgccacg gccctgcagg cccaactcgc
     2701 ctccgagaag ctgcgcatct acctcagccg cgacgtcctg ggcacggagc tctgcggcgc
     2761 cctcaagaac gtgctggcca tcgccgcggg cctggtggac ggcctccagc tgggctacaa
     2821 cgcccgggcg gccctcatca cccgggggct ggccgagatg gcccgcctgg tggaagtcct
     2881 cggcggccag cccgccacgg tgatgggcct ggccggcatg ggcgacctgc tgctcacggc
     2941 cacggggccc cagagccgga accgcacctt cggcgaactg gtggggaagg ggaacagcgt
     3001 ggagacggcc cgggacgccc tgggcggcca ggtcatcgaa ggcatgttca ccaccgaggc
     3061 ggccctggcc ctggccgggg agcacggtct cgacctgccc atcgcggcgg aggtgcagcg
     3121 cctgctcaac ggcgagcgcc ccgaagaggc cgtgcggcgg ctgatgacgc gatcgctgaa
     3181 gtccgagtag ggaggcccca tggccacgcc gttccgtttc cgcatcctcc agcacggcga
     3241 ggcgggatcg ccggtgcggg agtccttcag tccggcggag cccaggccag gctgggtccg
     3301 gctcgcgctg aaggccatgg ccctgaacca cctggacctc tggaccacct ttggcctgcc
     3361 gggcttcccg ctgcccctgc cgctgacgcc gggttgtgac ggcgccggca cggtggaggc
     3421 cgtgggcgag ggcaccgtcc tgcctcccgg cgtggtggcg gggggcagcg tgatgatcgc
     3481 gccgggcctc agctgcggtg tctgccccgc ctgcctgcgg ggcgacgaca tgctctgtcc
     3541 aggctacggt gtgctgggtc acgtctgcga cggcacggcc gccacccatg tgctggtgcc
     3601 cgcggcca
//
LOCUS       DASUDT010000316         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_235963, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000316 DASUDT010000000
VERSION     DASUDT010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235963"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1370
                     /gene="sdhA"
                     /locus_tag="VFV26_06475"
     CDS             <1..1370
                     /gene="sdhA"
                     /locus_tag="VFV26_06475"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="succinate dehydrogenase (quinone) flavoprotein
                     subunit"
                     /protein_id="HEX4845848.1"
                     /translation="MHNRHEMLELIVVDGVAKGIVTRDMVTGEIESHLADAVILSTGG
                     YGNVFYLSTNAMGCNGTAVWRAYKKGAAFGNPCFTQIHPTCIPVTGDHQSKLTLMSES
                     LRNDGRVWVPKKKEDCKKNPNDIKEEDRDYYLERKYPSFGNLAPRDISSRAAKQVCDE
                     GRGVGETGLGVYLDFSDAIRRLGKAKIEEKYGNLFEMYERITDENPYETPMRIYPAVH
                     YTMGGLWVDYNLQSTIPGLFVAGEANFSDHGANRLGASALMQGLADGYFVLPATVSNY
                     LAGLKPGVRPAADHPEVAETLATVKTRVEKLLSIKGTKSPTHFHRELGKIMWEYCGMA
                     RNEAGLKKALELIPKLREEFWKDVRVVGENESLNQSLEMAARVADFLELGELMCLDAL
                     QRRESCGGHFREEFQTEDGEALRDDENFCHVAVWEYKGEGQAPERHIESLTFDNVHLA
                     TRSYK"
     gene            1382..2173
                     /locus_tag="VFV26_06480"
     CDS             1382..2173
                     /locus_tag="VFV26_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEX4845849.1"
                     /translation="MSHKSMNLTLHVWRQKNAKCDGKFVEYKADGVSPDMSFLEMLDV
                     VNEGLIAKGEEPIEFDHDCREGICGMCSMVINGRPHGPKERTTTCQLHMRSFKDGDSI
                     TLEPWRAEAFPVIRDLVVDRTAFDRIIAAGGFISAPAGSPQDANALPIPKENADLSMD
                     AAACIGCGACVAACPNASAMLFVSAKISHLGLLPQGQPERYLRVRDMVAQMDAEEFGT
                     CTNHGECEAACPKGIKMENIARMNRDFIKASLTYRPATTSGGGAG"
     gene            2258..>2907
                     /locus_tag="VFV26_06485"
     CDS             2258..>2907
                     /locus_tag="VFV26_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HEX4845850.1"
                     /translation="MRTPSRQFRELLDMIKFEHTVFALPFAFLGALGAAQGMLPPLRT
                     ILWILAAMIGARTAAMTFNRLVDADVDAENPRTADRALPAGRVSKAGATTLLGAGVVL
                     FGLAAGALGPLTWALSPLALVIILGYSLCKRFTSWAHVVLGLSLSGAPLGAWIAVSGR
                     IEPPALWLSGGVLAWTAGFDILYALQDQGYDRSKGLHSVPARLGTAGSLALSRAFHV"
BASE COUNT          512 a         1069 c          882 g          444 t
ORIGIN      
        1 agatgcataa ccggcacgag atgctggagc tcatcgtggt cgacggcgtg gccaagggca
       61 tcgtcacccg cgacatggtc accggcgaga tcgagtccca cctcgccgat gccgtgatcc
      121 tctccaccgg cggctacggc aatgtcttct acctgtccac caacgccatg ggctgcaacg
      181 gcacggccgt ctggcgggcg tacaagaagg gcgccgcctt cggcaacccc tgcttcacgc
      241 agatccaccc cacctgcatc cccgtgacgg gcgaccatca gagcaagctg acgctcatgt
      301 ccgagtcgct gcggaacgac ggccgcgtgt gggtgcccaa gaaaaaggaa gactgcaaga
      361 agaaccccaa cgacatcaag gaagaggacc gcgactacta cctcgagcgg aagtacccct
      421 ccttcggcaa cctggccccc cgcgacatct ccagccgcgc cgccaagcag gtctgcgacg
      481 agggccgcgg cgtgggcgag accggcctgg gcgtctacct cgacttctcc gacgccatcc
      541 ggcgcctggg caaggccaag atcgaggaga aatacgggaa cctcttcgag atgtatgagc
      601 gcatcacgga cgagaacccc tacgaaaccc ccatgcgcat ctaccccgcc gtgcactaca
      661 ccatgggcgg cctgtgggtg gactacaacc tccagagcac cattcccggc ctcttcgtgg
      721 cgggtgaagc gaacttcagc gatcacggcg ccaaccgcct gggggcctcg gcgctcatgc
      781 agggcctggc cgacgggtac ttcgtgctgc ccgccacggt cagcaactac ctggctggcc
      841 tcaaacccgg tgtccgtccc gccgcggacc accccgaggt ggcggaaacc ctggccaccg
      901 tgaagacccg cgtggaaaag ctcctgtcca tcaagggcac caagagcccc acgcacttcc
      961 accgcgagct gggcaagatc atgtgggagt actgcggcat ggcccgcaac gaggccggcc
     1021 tcaagaaggc gctcgaactc atccccaagc tccgcgagga attctggaag gatgtccgcg
     1081 tggtcggcga gaacgagagc ctcaaccaga gcctggagat ggccgcccgc gtggccgact
     1141 tcctggaact gggcgagctg atgtgcctcg acgcccttca gcgccgcgag agctgcggcg
     1201 gccacttccg cgaggagttc cagaccgagg atggcgaggc gctccgcgac gacgagaact
     1261 tctgccacgt cgccgtctgg gaatacaagg gcgagggcca ggctccggag cgccacatcg
     1321 agtccctgac cttcgacaac gtccacctcg ccacccgcag ctacaagtga gggcctgagc
     1381 catgtcccat aaatccatga atctcaccct ccacgtgtgg cgccagaaga acgccaagtg
     1441 cgacggcaag ttcgtcgagt acaaggccga cggcgtcagc cccgacatgt ccttcctgga
     1501 gatgctggat gtcgtgaacg agggcctcat cgccaagggc gaggagccca tcgagttcga
     1561 ccacgactgc cgcgaaggca tctgcggcat gtgcagcatg gtcatcaacg gacgccccca
     1621 cggccccaag gagcgcacca ccacctgcca gctgcacatg cgcagcttca aggatggcga
     1681 cagcatcacc ctggaaccct ggcgcgccga ggctttcccc gtgatccgcg acctcgtggt
     1741 ggatcgcacg gccttcgacc gcatcatcgc cgccgggggc ttcatctccg cccctgcggg
     1801 ctcgccccag gatgccaacg ccctgcccat ccccaaggag aacgccgacc tctccatgga
     1861 cgccgccgcc tgcatcggct gcggagcctg cgtggccgcc tgccccaacg ccagcgccat
     1921 gctcttcgtc tccgcgaaga tcagccacct gggcctcctg ccccagggtc agcccgagcg
     1981 ctacctccgc gtccgcgaca tggtcgccca gatggacgcc gaggagttcg gcacctgcac
     2041 caaccacggc gagtgcgagg ccgcctgccc caagggcatc aagatggaga acatcgcgcg
     2101 catgaaccgc gacttcatca aggccagcct cacctaccgt cccgccacca ccagcggcgg
     2161 cggcgcgggc tgaacctgac ccgtttcccg gcaggacgcc cggcatccgc cgggcgttct
     2221 gtttcacggt ccggcctatg gctatcctgg atgtcccatg cgcacccctt cccgccagtt
     2281 cagagaactc ctcgacatga tcaagttcga acacacggtg ttcgcgctgc ccttcgcgtt
     2341 cctgggcgcc ctgggggcgg cgcagggaat gcttccgccc ctgcggacca tcctctggat
     2401 cctggcggcc atgatcgggg cccgcacggc ggccatgacc ttcaaccggc tggtggacgc
     2461 ggatgtggat gcggagaacc cccgcactgc agaccgggcc ctgcccgcgg ggcgggtctc
     2521 caaggccgga gccaccaccc tgctcggcgc gggcgttgtg ctcttcggcc tcgccgccgg
     2581 tgcgctgggg ccgctcacct gggccctctc gcccctggcc ctggtcatca tcctgggcta
     2641 ctccctctgc aagcgcttca cctcctgggc ccacgtggtg ctgggcctgt ccctatccgg
     2701 agcgcccctg ggggcctgga tcgcggtatc ggggcgcatc gagccgccgg ccctctggct
     2761 ttccggcggc gtgctggcct ggaccgcggg cttcgacatc ctctacgcgc tccaggacca
     2821 gggctatgac cgcagtaagg gccttcattc tgttccggcc cggctcggca ccgccggatc
     2881 cctcgccctc tcccgcgcct tccatgt
//
LOCUS       DASUDT010000317         5617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_589406, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000317 DASUDT010000000
VERSION     DASUDT010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5617
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589406"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFV26_06490"
     CDS             complement(<1..509)
                     /locus_tag="VFV26_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845851.1"
                     /translation="MRSIPIRAPLLGAALCVIAMTGSAQSWDAAVNASSWAKQDRDDS
                     FAFYDSAAKSLRIWIRDGGLLGTIPTGRLDGQPERWAIDPRGNAWVAHGTTLTYVDRT
                     GRTMGSVKLPAEVGDLCWDAKGIILSYRTPEPYLEKRDFRSADVLWSFGAKPVKHEGT
                     LAHYRRPIVL"
     gene            complement(593..2518)
                     /gene="dxs"
                     /locus_tag="VFV26_06495"
     CDS             complement(593..2518)
                     /gene="dxs"
                     /locus_tag="VFV26_06495"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEX4845852.1"
                     /translation="MNDSIRPYPLLDSLAAPQQVRHFSPAQLEQLAAEVRAFIIASVS
                     ETGGHFSSNLGTVELTVALFHHFDFLQDRIVWDVGHQAYPHKILTGRMDRFPTLRMHH
                     GLSGFLKRDESPYDHFGAGHASTSISAALGMAKARDLQKQDHACIAVIGDGSMTAGMA
                     FEGLNQAGYLEAKNFLVILNDNDMSINPNVGSLQGYLNQIMSGQYYQRWRDRIEHAIK
                     AIPLEGLSKGVAKAAKWSEESFKRLMVPGLLFEDLGFRYLGPVNGHDVAATTKALAEA
                     KEKMKDGPVLLHVQTKKGYGYEPAVQDPLKWHGVTAFDAESGEIIKTQVDPAKPAPPS
                     YTSVFGKALVDLAKKDEKIVGITAAMLDGTGLNLFQKAFPDRCFDVGIAEQHAVTFAA
                     GLAAQGMRPVCAIYSTFLQRGFDQVAHDVCIQDLPVTFALDRAGIVGADGPTHHGLYD
                     LAYLRCLPNILLMAPKDENELRRMLMTAVYSGHPAALRYPRGNGLGVAMEEPIAALPL
                     GKGELLREGTDLVLCALGAMVDPAVRIAEALAADGISCAVINARFVKPLDGPLIHAWA
                     GRCRGVVTLEEGCAPGGFSGAVAESLADAGLARPLLRCAVPDHLVHHGDPKRLLEEEG
                     LSPRAIEARIRNFFRDI"
     gene            complement(2527..3414)
                     /locus_tag="VFV26_06500"
     CDS             complement(2527..3414)
                     /locus_tag="VFV26_06500"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEX4845853.1"
                     /translation="MNGAAALVQADLDRLLPLLDASLTAPFRDGEALRLGEAMRYSLE
                     AGGKRVRPVLCLLAAEAVGGTVAQALPGALALEYVHTYSLIHDDLPAMDDDDLRRGRP
                     TNHKVYGEGHAILAGDALLTEAFGVLAAADLDPIKRAEALALLAEGAGWRGMAGGQAL
                     DLEGETLATYDLDHLRLIHRLKTGALLRASLEIGAVLGGAAPAEQAALRAYGEAIGLA
                     FQIQDDILDATATDADLGKRAGKDAGRGKITYPSLLGLDGARTALSEATETALCHLAT
                     LPHHHSLAAWARYLAQRAK"
     gene            complement(3411..3650)
                     /gene="xseB"
                     /locus_tag="VFV26_06505"
     CDS             complement(3411..3650)
                     /gene="xseB"
                     /locus_tag="VFV26_06505"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEX4845854.1"
                     /translation="MNANPSFDDGLDRLEALVQQLESGSLSLEEALARFEEGVQLSQS
                     LQKQLSEAQRRVEVLKAGLGGEYRADPLDDAKESR"
     gene            complement(3693..4427)
                     /locus_tag="VFV26_06510"
     CDS             complement(3693..4427)
                     /locus_tag="VFV26_06510"
                     /inference="COORDINATES: protein motif:HMM:NF025729.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4412 domain-containing protein"
                     /protein_id="HEX4845855.1"
                     /translation="MRMLTTIAFGAILSAANLLATDLTITSQVTGKGALAKDGAQVQY
                     LSATRMRVNHAGSKTDSLVDYGKEVIYNIDHGKKVITKITFKDMQETLQALEGQMAGM
                     PEMVTKMMFGDVSEVKVEQLGPDTVLGRPCKKVRITLGKMVEELSVDPSLQFPLKDYA
                     KSMAMLNRAPGPMGALFKRVYQETAKLKGVPLRTRITGLMGMDVTTLATAVSTTPIPE
                     SAWALPPGYAEKDGGKEMKESMKGKR"
     gene            4514..>5617
                     /locus_tag="VFV26_06515"
     CDS             4514..>5617
                     /locus_tag="VFV26_06515"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4845856.1"
                     /translation="MARVLVVDDSKETCEFLEELLGGMGLEVTKATHPDRAIELLRKG
                     AFDLLLSDINLEAKKDGLDLLREAKPLGVDTILLSGFGTLETAIEAVREGAFDFLSKP
                     WNNEELKALVARALARRQSSGHGSAQCASPKGKRSLMIGSSPKMMVVYKTIASLQNSR
                     ATVLITGESGTGKELVARSIHLSSDRRDRAFVAVNCGALTETLLESELFGHVKGSFTG
                     AVGEKPGLFEEASGGTIFLDEIGETSPSFQVRLLRVLQEQEIRRVGGNKTIKVDSRVI
                     AATNRDLQQMVKAGTFREDLYYRLSVVELAVPPLRERREDMGALLDHFLAEFGQKDQQ
                     VYELHPEARRVLESYSWPGNVRELSNAVENLTQL"
BASE COUNT          878 a         1753 c         2028 g          958 t
ORIGIN      
        1 aggacgatgg ggcggcggta atgggctaag gtgccctcgt gtttgacagg cttggccccg
       61 aaggaccaca gcacatccgc gctgcggaaa tcccgtttct cgaggtaggg ctccggtgtg
      121 cggtaggaga ggatgatgcc cttggcatcc cagcagaggt cgccgacctc cgcagggagc
      181 ttcacgctgc ccatggtccg cccggtccgg tccacatagg tcagggtggt gccgtgggca
      241 acccaggcat tgccccgagg gtcgatggcc cagcgttcgg gctggccatc caggcgcccg
      301 gtggggatgg tgcccagcaa gcccccgtcc cggatccaga tgcgcaggct cttggcggcg
      361 gaatcgtaga aggcgaagga atcatcccgg tcctgcttgg cccagctgga ggcgttgaca
      421 gcggcatccc aggactgggc cgaaccggtc atggcgatga cgcagagggc tgcgcccagg
      481 aggggtgcgc ggatgggaat agacctcacg ggtgcctcca gaaagggggg aactgcctgg
      541 gtgggttggg actcacctta ggaatttatg aggccttccg caaggcattc ttttagatgt
      601 cacgaaagaa gttccggatc cgggcttcga tggcccgggg gctgagtccc tcttcttcga
      661 gcaggcgctt ggggtccccg tggtggacca ggtggtcggg cacggcgcaa cgcagcaggg
      721 ggcgggccag gcccgcatca gccagggatt ccgctacggc cccgctgaag ccgcccggcg
      781 cgcaaccttc ctccagggtc acgacgcccc ggcagcgtcc agcccaggcg tggatgaggg
      841 ggccgtccag gggcttcacg aaccgggcat tgatgacagc acaggagatg ccgtccgccg
      901 ccagggcttc tgcaatgcgt acagccggat ccaccatggc gccgagggcg cagaggacca
      961 ggtccgttcc ttcgcggagc agttccccct tgcccaaggg cagggcggcg atgggctcct
     1021 ccatggccac gcccaggccg ttgccgcggg ggtagcgcag ggcggcggga tgcccgctgt
     1081 agaccgcggt catgagcatg cgccgcagct cgttctcgtc cttgggggcc atgaggagga
     1141 tgttcggcag gcagcgcagg taggccagat cgtagaggcc gtggtgggtg gggccgtcgg
     1201 cgcccacgat gcccgcccgg tccagggcga aggtcacggg caggtcctgg atgcagacgt
     1261 catgggccac ctggtcgaag ccccgctgga ggaaggtgct gtagatggca cagacggggc
     1321 gcatgccctg ggcagccagg cccgcggcga aggtgacggc gtgctgctcg gcgatgccca
     1381 cgtcgaagca gcggtcgggg aaggccttct ggaagaggtt cagcccggtg ccgtccagca
     1441 tggcggcggt gatgccgacg atcttctcgt ccttcttcgc caggtccacg agggccttgc
     1501 cgaagacgct ggtgtagctg gggggggcgg gcttcgccgg gtccacctgg gtcttgatga
     1561 tctcgccgga ctcggcgtcg aaggcggtga cgccatgcca cttcagggga tcctgcacgg
     1621 cgggttcgta gccgtagccc ttcttggtct gcacatgcag cagcaccggg ccgtccttca
     1681 tcttctcctt ggcctcggcc agggccttgg tggtggcggc cacgtcgtgg ccgttcacgg
     1741 gtcccaggta gcggaagccc aggtcctcga agagcagccc cggcaccatg agccgcttga
     1801 agctctcctc gctccatttg gcggccttgg cgacgccctt gctcaggcct tcgaggggga
     1861 tggccttgat ggcgtgctcg atgcggtccc gccagcgctg gtagtactgg ccggacatga
     1921 tctggttcag gtagccctgc agcgacccca cgttgggatt gatgctcatg tcgttgtcgt
     1981 tgaggatcac caggaagttc ttcgcctcca ggtagcccgc ctggttgagg ccctcgaagg
     2041 ccatgcccgc ggtcatggag ccatcgccga tgacggcgat gcaggcatga tcctgcttct
     2101 ggagatcgcg ggccttggcc atgccaaggg ccgcggaaat gctggtgctg gcgtgcccag
     2161 cgccgaagtg gtcgtagggg ctctcgtcgc gcttcaggaa tcccgacagg ccatggtgca
     2221 tgcgcagggt ggggaagcgg tccatgcggc ccgtgaggat cttgtgcgga taggcctggt
     2281 ggcccacgtc ccacacgatg cggtcctgga ggaagtcgaa gtggtggaag agggcgaccg
     2341 tcagctccac ggtgccgagg ttggagctga agtgcccccc ggtttccgag acggaggcga
     2401 tgatgaaggc ccgcacttcg gcggccagct gctccagctg tgccggggag aaatggcgca
     2461 cctgctgggg ggcggccagg gagtccagca ggggataggg gcggatggaa tcgttcacgc
     2521 gtgttcctac ttcgcccgct gggccagata ccgggcccag gctgccaagg aatgatgatg
     2581 gggaagggtg gctagatggc atagggcagt ctcggtggct tcactcaggg cggtgcgggc
     2641 gccgtccagg cccaggagcg acgggtaggt gatcttaccc ctgcctgcat ccttcccggc
     2701 ccgcttgccc agatcggcgt cggtggcggt ggcatccagg atgtcgtcct ggatctggaa
     2761 ggccaggccg atggcctcgc cgtaggcccg cagggcggcc tgttccgcgg gggccgcgcc
     2821 gcccagcacg gcgccgatct ccagcgaggc ccgcaggagg gcgccggtct tgaggcggtg
     2881 gatgaggcgc aggtggtcga gatcgtaggt ggcgagcgtt tcgccctcca ggtccagggc
     2941 ctggcccccg gccatgccgc gccagccggc gccctcggcc agcagcgcca gggcctcggc
     3001 ccgcttgatg ggatccaggt ccgccgccgc cagcacaccg aaagcctcgg tgagcagggc
     3061 gtcgcccgcg aggatggcgt ggccttcgcc gtagaccttg tgattggtgg gccgtccgcg
     3121 ccgcaggtcg tcgtcgtcca tggcgggcag gtcgtcgtgg atgagggaat aggtgtggac
     3181 gtactccagg gccagggccc cgggcagggc ctgggccacg gtgccgccca cggcctcggc
     3241 ggccagcagg cagagcacgg gccgcacgcg cttgcccccg gcctccaggc tgtagcgcat
     3301 ggcctcgccc aggcggaggg cctcgccgtc ccggaagggg gccgtgaggg aggcgtccag
     3361 cagggggagc aggcggtcca ggtcggcctg gaccagcgcg gccgccccgt tcatcgggat
     3421 tccttcgcat catcaagggg atcggcccga tactcgccgc ccaggcccgc cttgaggact
     3481 tcgacccggc gctgggcctc ggacagctgc ttctggagcg actggctcag ctggaccccc
     3541 tcttcgaagc gggccagggc ttcctccagg ctgaggctgc cggattccag ctgctgcacg
     3601 agggcctcca gccggtccag gccatcatcg aaggaggggt tggcgttcat ggggggtccg
     3661 aaggaagggg cccgcgaggg gccccaccca gtctatcgct tccccttcat gctttccttc
     3721 atctccttgc cgccgtcctt ttcggcatag ccagggggca gggcccaggc gctttcgggg
     3781 atgggggtgg tggatacggc ggtggccagg gtggtcacat ccatgcccat gagtccggtg
     3841 atgcgggtgc ggaggggcac gcccttgagc ttggcggtct cctggtagac gcgcttgaag
     3901 agggccccca tgggtccggg cgcccggttc agcatggcca tggacttggc gtagtccttc
     3961 agcgggaact ggagggaggg atcgacgctc agttcctcca ccatcttgcc gagggtgatg
     4021 cgcaccttct tgcatggccg ccccaggacg gtgtcggggc cgagctgctc caccttcacc
     4081 tcggagacat cgccgaacat catcttcgtg accatctcgg gcatgccggc catttgaccc
     4141 tccagggcct ggagggtttc ctgcatgtcc ttgaaggtga tcttcgtgat gaccttcttc
     4201 ccgtggtcga tgttgtagat gacctccttg ccgtagtcca ccaggctgtc ggtcttcgac
     4261 cccgcatgat tcacgcgcat ccgcgtggcg ctgagatact gcacctgggc gccgtccttg
     4321 gccagggcgc ccttgcccgt gacctgtgac gtgatggtga ggtctgtggc caagaggttg
     4381 gccgcagaca ggatggctcc aaaagcaatg gttgtaagca tcctcatggg aattctccgt
     4441 ggaaggggtg ccccgagcat acgcctggtc ctggtccggg gccaggtggg gtaccttcat
     4501 ggtgggggtg gccgtggccc gtgtgcttgt ggtggacgac agcaaggaga cctgcgagtt
     4561 cctggaggag ctgctgggtg gcatggggct ggaggtcacc aaggccacgc atcctgaccg
     4621 agccatcgaa ctgctgcgga agggggcctt cgatctgctg ctttccgaca tcaacctgga
     4681 ggccaagaag gatggcctgg acctgctgcg ggaagccaag cccctggggg tggacacgat
     4741 cctgctctcg gggttcggga ccctggagac cgccatcgag gccgtgcggg aaggggcctt
     4801 cgacttcctc agcaagccct ggaacaacga ggagctgaag gccctggtgg cgcgcgccct
     4861 ggcccgccgc caatccagcg gccatggcag cgcccagtgc gcctcgccca aggggaagcg
     4921 cagcctcatg atcggttcca gccccaagat gatggtggtc tacaagacca tcgccagcct
     4981 ccagaacagc cgggccactg tgctcatcac gggggagagc ggcacgggca aggagctggt
     5041 cgcccggagc atccacctgt ccagcgatcg ccgggaccgg gcctttgtgg ccgtgaactg
     5101 cggcgccctg acggaaacac tcctggaatc cgagctcttc ggccacgtga agggctcctt
     5161 cacgggcgcc gtgggcgaaa agccgggcct tttcgaggaa gcctccggcg gcaccatctt
     5221 cctggatgag atcggggaga ccagccccag cttccaggtg cgcctgctgc gcgtgctcca
     5281 ggagcaggag atccgccgcg tgggcggcaa caagaccatc aaggtggatt ccagggtcat
     5341 cgcggccacc aatcgggatc tccagcagat ggtgaaggcc gggaccttcc gcgaggatct
     5401 ctactaccgc ctcagcgtgg tggaactggc ggtgccgccc ctccgcgaac ggcgggagga
     5461 catgggcgcc ctgctggatc acttcctggc cgaattcggc cagaaggacc agcaggtcta
     5521 cgagctgcat cccgaggccc ggcgggtgct cgagtcatac tcctggccgg ggaatgtccg
     5581 ggaattgagc aacgccgtgg agaacctgac ccagctg
//
LOCUS       DASUDT010000318         2235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_501407, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000318 DASUDT010000000
VERSION     DASUDT010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501407"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VFV26_06520"
     CDS             complement(<1..586)
                     /locus_tag="VFV26_06520"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845857.1"
                     /translation="MNRNIMFALAGGIAAGFLAGYAVGTSGAKDSGPTVAAPTTAVVM
                     PAPSLGGGVPAGAAAPGPIPAGMGLPNAEMQARIIRLEGLVKADPKNHDAWVDLGNTY
                     FDTHQAQKSVDAYAKALALKPGNPDVLTDQGVMYRELSQFDKAIANFQKASQLNPTHT
                     QSLFNLGIVYASDLHKPEEAAKVWNKILVLAPNSP"
     gene            707..>2235
                     /locus_tag="VFV26_06525"
     CDS             707..>2235
                     /locus_tag="VFV26_06525"
                     /inference="COORDINATES: protein motif:HMM:NF015859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4845858.1"
                     /translation="MVHPFPPQPIEIFVNQTPLRPPAAGRSRVAIVLLAGVAVSLAGF
                     FMVRDAYRRQVEAQFHAVARDRAESVAQGLRHGFEDVLALRSFFEASDDVTPADFQAF
                     TSLPLGLHPYIKAFQWLPGVGPEDRARLELEARKTHPGFRFFSRDGEGREVVIPQGGR
                     FHGVYFVNPYRGNEVTLGYSASHLATRQQALERALRTGELSASGRVRLIQESGAQFGL
                     LVMASVRNREGRPLGVVQGVFRAGDLVAKSLAILEPRGVELRLMDASAPDSESLLHAE
                     PSALPAAGTARSPLRLTRSFELAGRTWRVEVLPAPGHYLPGAGWRAWGVLTGGLAFSL
                     LLAGYVRTLVARQEQIRSQVDSRTQELARETESHRRDAQALRESEARFRHLVEVMGEG
                     MWVLDPEGLTTFVNRRMAEMLGYTPEEMVGRPLFWFMFEEDQPQARRNLAQRREGVGA
                     QHDSRFRRKDGTEIWTIVTGNPVLDEEGRVVSVLGIVTDITERRRAEQSQLQSQKLES
                     LG"
BASE COUNT          318 a          723 c          828 g          366 t
ORIGIN      
        1 gggggctgtt cggggcgagg accaggatct tgttccagac cttggcggcc tcctcgggct
       61 tatgaaggtc gctggcgtac acgatgccga ggttgaagag gctctgggtg tgggtgggat
      121 tgagctggct ggccttctgg aagttggcga tggccttgtc gaactggctg agctcgcggt
      181 acatcacgcc ctggtccgtg aggacatccg ggttgccggg cttcagggcc agggccttgg
      241 cgtaggcatc caccgacttc tgggcctggt gggtgtcgaa gtaggtgttc ccgagatcca
      301 cccaggcatc atggttcttg ggatccgcct tcacgaggcc ttccagccgg atgatgcggg
      361 cctgcatctc ggcattgggc aggcccatgc ccgccgggat cgggccgggc gcggcggcgc
      421 cggcgggcac gccgccgccg agggaggggg cgggcatgac gacggcagtg gtgggggcgg
      481 ccacggtggg gccgctgtcc ttggcgccgc tggttccgac ggcgtagccc gccaggaatc
      541 ctgcggcgat gcctccagcc agggcgaaca tgatgttccg gttcaaacgc cacctcctga
      601 ggaccttccg gtcacctgta attctcccac aggtcatgcc cgggactgaa cggccgatga
      661 aggtaaggcc tgccgggttt cccctaacag cgggcgccct gccaggatgg ttcatccttt
      721 cccgccccag cccatcgaga tcttcgtgaa ccagaccccg ctccgccccc ctgctgccgg
      781 ccggtcccgg gttgccatcg tgctgctggc gggggtcgcg gtatccctgg cgggcttttt
      841 catggtccgg gatgcctacc gccggcaggt ggaggcccag ttccatgcgg tggcccggga
      901 ccgggccgaa agcgtggccc aggggctgag gcacggcttc gaggatgtcc tggccctccg
      961 cagcttcttc gaagccagcg acgacgtgac tccggcggat ttccaggctt tcacctcgct
     1021 gcccctgggg ctgcacccct atatcaaggc cttccagtgg ctgccgggcg tggggccgga
     1081 ggaccgggcc cgtctggagc tggaggcccg gaagacccac cccggattcc gcttcttcag
     1141 ccgcgatggg gagggccgcg aggtggtgat tccccagggc ggacggttcc acggcgtgta
     1201 tttcgtgaac ccctaccggg gcaacgaggt gacgctgggg tattccgcca gccacctggc
     1261 cacgcgccag caggcgctgg agcgggcgct tcgcaccggg gagctgtccg ccagcgggcg
     1321 ggtgcgcctc atccaggaat ccggggccca gttcggcctg ctggtgatgg cttcggtgcg
     1381 gaaccgggaa gggcgccccc tgggggtggt ccagggggtc ttccgcgcgg gcgacctggt
     1441 ggcgaaatcc ctcgccatcc tggagccccg tggggtggaa ctgcgcctga tggatgccag
     1501 cgccccggat tcagaatcgc tgctgcacgc ggaaccctcg gcgctgcccg cggccggaac
     1561 ggcccggtcg cccctgcggc tcacccggag cttcgagctg gcaggccgga cctggcgcgt
     1621 ggaggtgctc cccgcaccag gccattacct cccgggcgcg gggtggcgcg cctggggtgt
     1681 cctcaccgga gggctggcct tcagcctcct cctggcgggc tacgtgcgga ccctggtggc
     1741 gcgccaggag cagatccgca gccaggtcga cagccgcacc caggaactgg cccgggagac
     1801 ggaaagccac cgccgggacg cccaggccct gcgggagagc gaggcgcggt tccggcacct
     1861 ggtggaggtg atgggcgaag gcatgtgggt gctggacccg gagggcctca ccaccttcgt
     1921 caaccgccgc atggccgaga tgcttggata cacccccgaa gagatggtgg ggcgtcccct
     1981 cttctggttc atgttcgagg aggatcagcc ccaggcccgg cggaacctgg cccagcggcg
     2041 cgagggggtc ggcgcccagc atgattcgcg gttccggagg aaggacggca cggagatctg
     2101 gaccatcgtc accggaaatc ccgtgctgga tgaggaaggg cgcgtggtga gcgtgctggg
     2161 catcgtcacg gatatcaccg agcggcgccg ggcggagcag tcgcagctcc agagccagaa
     2221 gctggaaagc ctggg
//
LOCUS       DASUDT010000319         4135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_302370, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000319 DASUDT010000000
VERSION     DASUDT010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4135
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302370"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="VFV26_06530"
     CDS             <1..704
                     /locus_tag="VFV26_06530"
                     /inference="COORDINATES: protein motif:HMM:NF014703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX4845859.1"
                     /translation="RRELFRVAMGCVGRDSEGRKLALWLFIAMIPTGILGLATRGVKE
                     AAKDHLWVYGLGLVCTSGLLYLANRLSQQRINLLGVDQAGRGIGDLRASDALAVGAIQ
                     GLGGGFGLSRSGSTIAMGVFQGLRLPASARFSFLLGVPTIAAAAVLELRGLLKPLFLH
                     QPLPAELAFPAGSASPALLCAAGVAASAISGYLAIGLLDRFTQKPRLNGFAVYCQGLG
                     LVMLALGATGALGHH"
     gene            810..1571
                     /locus_tag="VFV26_06535"
     CDS             810..1571
                     /locus_tag="VFV26_06535"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845860.1"
                     /translation="MIQLNEVHKSFEVKDRKTRTVKRIDAVRGISLAVKPGEIYGLLG
                     PNGAGKSTTLRMIAGLMDPDAGTVHVCGMDARQKPEAVRGCLGYLSTDMGVYVRFTPR
                     ELLRIFGEFQDVDPVVAERRGLHLLEKLQLADFADVKMEGFSSGQKQKVSIARALLHD
                     PKVVIFDEPTTGLDVLTAKTVLDLLRIMREEGRTVIVSTHVMPMVEDICDRVGIIFDG
                     KLHGDAPPRDILQARRAKTLDEVFFQLAAESEGGN"
     gene            1571..2761
                     /locus_tag="VFV26_06540"
     CDS             1571..2761
                     /locus_tag="VFV26_06540"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845861.1"
                     /translation="MRGALLIAKKEFLELSKDRKTLFFAFVLPFLLYPAIFGMMAKMG
                     KRDEAQNRNKASRIYVSDPSGILDGILASDPKRFERVARPEGDLRQALRDQKLELAIE
                     VAPTAAEALQKHATFIVTATVDESERASELALKRLKESLKGQEKTWVQGRLQTLGASL
                     QLAEPVKLDVKDAADAALKAGKFIGMLLPYLLMTMMYTGAMQHGIYATAGEKERNTLL
                     SLMATRLPRNQIILGKLLYIFSMGVIAALLNLLSMGLSIPFIGGGSAGSMQAMAAIAN
                     PMTLGLTFLIMVPLGLFFANFILLMGIQAKNTIEAGSAIMPGIFLVVFLGMFTMAPGV
                     DKIPALAYVPVVNVCLALRKMFGQQPNWTEYAIAFAMTVGLAGLMTLVSTRILNREKA
                     LFKA"
     gene            2848..3378
                     /locus_tag="VFV26_06545"
     CDS             2848..3378
                     /locus_tag="VFV26_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845862.1"
                     /translation="MATKAKSEQAPKSAPAPAAQPSPLAGAFAKAVKLVDSGKHAEAV
                     KALDTLMEDAQAAGDWAVKRRAQIYRTLSEAKLHPAKAVAADAVTEIQACLNRRDTDG
                     ALKLAEKAIKAHPAQANLHYLRAVAFAQAENTEGSAESMKKAMELDGDLVFQWHMEPD
                     FNSVRKSPLFAFTEGR"
     gene            3397..>4135
                     /locus_tag="VFV26_06550"
     CDS             3397..>4135
                     /locus_tag="VFV26_06550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconeogenesis factor YvcK family protein"
                     /protein_id="HEX4845863.1"
                     /translation="MSGPLGLHADQPLKVVALGGGTGLAALLRSLKREAGRSRDPWKL
                     TGIVTVSDNGGSSGRLRDELGGLPPGDLRNCLSALTLEDSALSDLLNYRFKGDGSLAG
                     HSLGNLMLWALADLTGDWVRAIRQLSGVLVTVGRLFPSTVVPITLCAEDMNGHRYEGE
                     TAVGSCRPPLARLWMEPTDAEPLPEAVLALLRADLVILSPGSLYTSTISNLLLPELQE
                     AVAISRAPVVYVANLMTEPGESAGLDLL"
BASE COUNT          661 a         1489 c         1310 g          675 t
ORIGIN      
        1 tccgccggga gctgttccgg gtggccatgg gctgcgtggg ccgggattcc gagggacgca
       61 aactggccct gtggctgttc atcgccatga tccccacggg catcctcggg ctggccaccc
      121 ggggcgtgaa ggaggcggcc aaggaccacc tctgggtgta cggcctcgga ctggtctgca
      181 cttcgggcct gctctacctc gccaaccgcc tgagccaaca gcggatcaac ctgctcggcg
      241 tggatcaggc cgggcgcggc atcggtgacc tccgggcctc ggatgcgctg gccgtgggag
      301 ccatccaggg cctcggcggc gggttcgggc tgtcccgctc cggctccacc atcgccatgg
      361 gcgtcttcca gggcctgcgc cttccggcct cggcgcggtt cagcttcctc ctgggcgtgc
      421 ccaccatcgc cgccgccgcc gtgctggaac tgcgcggcct gctgaagccc ctgttcctgc
      481 atcagcccct tccggcagaa ctggcctttc ccgccggatc ggcctccccg gccctgcttt
      541 gcgcggccgg ggtcgcggcc tcggccatct ccggctatct ggccatcggc ctcctggacc
      601 gcttcaccca gaagcccagg ctcaacggtt tcgcggtcta ctgccagggc ctggggctgg
      661 tgatgctggc cctcggagcc acgggggccc tcggccacca ctgaaagtca tcgcaccgcc
      721 gttcaccggc ccggtccttc cgttcgccgg tcacggaccg tgagggcggt cccggcctct
      781 acactggggc cttcccatcc ggaggcccgg tgatccagct gaacgaggtc cacaaatcct
      841 tcgaggtgaa ggaccggaaa acccggacgg tgaagcgcat cgatgcggtg cgcggcatct
      901 cgctggccgt gaagcccggc gagatctacg ggctgctggg gcccaatggc gccggcaagt
      961 ccacgaccct gcggatgatc gcgggcctca tggatccgga tgccggcacc gtccatgtct
     1021 gcggcatgga cgcccgccag aagcccgagg ccgtgcgtgg ctgcctgggc tacctgagca
     1081 cggacatggg cgtgtacgtg cgcttcacgc cccgcgagct gctgcggatc ttcggggagt
     1141 tccaggatgt agaccccgtc gtcgccgagc gccggggcct gcacctgctg gagaagctcc
     1201 agctggcgga cttcgcggac gtgaagatgg agggcttctc ctcgggccag aagcagaagg
     1261 tgagcatcgc ccgcgccctg ctgcacgatc ccaaggtggt gatcttcgac gagcccacca
     1321 cgggcctgga cgtgctcacg gccaagaccg tgctggacct gctgcgcatc atgcgcgaag
     1381 aggggcgcac agtgatcgtg tccacccacg tcatgcccat ggtggaagac atctgcgacc
     1441 gcgtgggcat catcttcgac ggcaagctcc acggcgacgc cccgccccgc gacatcctgc
     1501 aagccaggcg tgccaagacg ctggatgagg tcttcttcca actcgcagcc gaatcggaag
     1561 ggggcaactg atgcgcggcg ccctgctcat cgccaagaag gagttcctgg aactctcgaa
     1621 ggaccggaag acgctcttct tcgccttcgt gctgcccttc ctgctctatc ccgccatctt
     1681 cggcatgatg gccaagatgg ggaagcggga cgaggcccag aaccgcaaca aggccagccg
     1741 gatctatgtc tccgatccct ccgggatcct ggacgggatc ctcgcctcgg atccgaagcg
     1801 cttcgagcgt gtggccaggc ccgagggcga tctgaggcag gccctccggg accagaagct
     1861 ggaactggcg atcgaggtgg cgcccaccgc cgccgaagcc ctccagaagc acgcgacctt
     1921 catcgtcacc gccaccgtgg acgagagtga gcgggcctcc gaactggccc tcaagcggct
     1981 caaggagtcc ctcaagggcc aggagaagac ctgggtgcag gggcgcctcc agaccctggg
     2041 cgcttccctg cagctggccg agcccgtcaa gctggacgtg aaggatgccg cggacgcggc
     2101 cctgaaggcc gggaagttca tcggcatgct gctgccctac ctcctgatga ccatgatgta
     2161 caccggcgcc atgcagcacg gcatctacgc caccgcggga gagaaggagc ggaacacgct
     2221 cctgagcctc atggccacgc gcctgcccag gaaccagatc atcctcggca agctgctcta
     2281 catcttcagc atgggcgtca tcgcggccct gctgaacctg ctcagcatgg gcctctccat
     2341 ccccttcatc gggggcggct ccgcgggctc catgcaggcc atggcggcca tcgccaaccc
     2401 catgaccctg ggcctcacct tcctgatcat ggtgcccctg ggcctgttct tcgcgaactt
     2461 catcctgctc atgggcatcc aggccaagaa caccatcgag gccggcagcg ccatcatgcc
     2521 cggcatcttc ctggtggtct tcctcggcat gttcaccatg gccccgggcg tggacaagat
     2581 ccccgccctc gcctacgtgc ccgtggtgaa cgtctgcctg gccctccgca agatgttcgg
     2641 ccagcagccg aactggaccg aatatgccat tgccttcgcc atgaccgtgg gcctggcggg
     2701 cctcatgacc ctggtctcca cccggatcct gaaccgcgaa aaggccctgt tcaaagcctg
     2761 aatcccgcct tcgccgccat gcggccggga tttgcccggg gaaacctgtc actctatagt
     2821 ttctccaagg cttccagagg atcccgcatg gcgacgaagg ccaagtcaga acaagctccc
     2881 aagtccgccc ccgctccggc cgcgcagccc tctccgctcg ctggcgcctt cgcgaaggct
     2941 gtcaagctcg tggattcggg caagcacgcc gaggccgtga aggccctgga cacgctgatg
     3001 gaggacgccc aggccgccgg cgactgggcc gtgaagcgcc gggctcagat ctaccgcacc
     3061 ctgtctgaag ccaagctcca ccccgccaag gccgtggccg ccgatgccgt caccgagatc
     3121 caggcctgcc tgaaccggcg cgacacggat ggcgccctga agctcgccga gaaggccatc
     3181 aaggcccatc ccgcgcaggc caacctgcac tatctccgcg ccgtggcctt cgcccaggcg
     3241 gagaacaccg aaggttccgc cgaaagcatg aagaaggcca tggaactgga tggcgacctg
     3301 gtcttccagt ggcacatgga accggacttc aactccgtcc ggaaatcgcc tctcttcgcc
     3361 ttcaccgaag gccgctaggc cctgccggac cacgccatgt ccggcccgct gggtctccac
     3421 gccgaccagc cactgaaggt ggtggccctg ggcggaggca ccggcctggc ggcgctcctg
     3481 cgatccctga agcgcgaagc gggccgcagc cgcgacccct ggaagctcac gggcatcgtc
     3541 accgtctccg acaatggagg ttcctccggg cggctccgcg acgaactggg cggccttccc
     3601 cccggggatc tccggaactg cctttcggcc ctgaccctgg aggattctgc cctctcggat
     3661 ctcctgaact accggttcaa gggggacggc agcctcgccg gacattcgct cggcaacctc
     3721 atgctgtggg ccctggcgga cctcacgggc gattgggtgc gggccatccg gcagctgtcg
     3781 ggcgtgctgg tgacggtggg ccggctcttc ccctccaccg tggtgcccat caccctctgc
     3841 gcggaggaca tgaacgggca tcgctacgag ggcgaaaccg ccgtgggctc ctgccgcccg
     3901 cctctggcgc ggctgtggat ggagcccacc gatgcagagc ccctgcccga ggcggtcctc
     3961 gccctcctgc gggccgatct cgtgatcctg agccccggca gcctctacac ctcgaccatc
     4021 tccaacctgc tcctccccga actgcaggag gccgtggcga tctcacgggc gccggtggtc
     4081 tatgtggcca acctgatgac cgaacccggc gagtccgccg ggctggacct gctgg
//
LOCUS       DASUDT010000320         5921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_103618, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000320 DASUDT010000000
VERSION     DASUDT010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5921
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103618"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VFV26_06555"
     CDS             complement(<1..211)
                     /locus_tag="VFV26_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845864.1"
                     /translation="MPPPVPFGPDIRLLFATRAARMASYGFLSVVLVLYLAGLGFSQA
                     RIGLLLTLTLVGDTLISLGITLHADR"
     gene            262..849
                     /locus_tag="VFV26_06560"
     CDS             262..849
                     /locus_tag="VFV26_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845865.1"
                     /translation="MPPLSRPAFRWSVLIGLWALVGAVLWILLVQAFLLALNPFCHTQ
                     RPGVAHVQVRSVDQDRESQITDFVTVKDGGAERVLRLAKAEAGELRVDDEVWILDAWY
                     ADGLRPTQFRLTPLRVLLEYPVLLLLPAAWGLWRVRRAKRVADAAPPPPVRRTFTDDF
                     HLRAQRFSKPEAEKAPPAQGPPPDPFVPTPPGGTP"
     gene            846..1376
                     /locus_tag="VFV26_06565"
     CDS             846..1376
                     /locus_tag="VFV26_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845866.1"
                     /translation="MTRTWTRPWLSRILPALLLLAAPAFAEQCPDCRQLVHTKDIGTC
                     QLCTNPTQSGQFPLCMTCSDRLRECERCRKALPATTPKLDGSADQTFKSGRWTYRVET
                     FNQGTRSEGTRGTLTFAGQPLPVPAAVNDHVRTPWGLLYWVGEPGTAFGGRGWMLRAK
                     PSRPLGKPVAPPLTHA"
     gene            1497..2669
                     /locus_tag="VFV26_06570"
     CDS             1497..2669
                     /locus_tag="VFV26_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845867.1"
                     /translation="MRPILVLPLLLAPTLAAQSLGNLQDLSDAYNKARSLAQSYRGSS
                     RTWHEPAWSASPGPSFTKELTKTPEEKAIEKRQEVLKKRIAKLSSSREHWRVALERLQ
                     QNQDWRQELKYWAEESQAAQFGAIIASVSLLVGASGPLEAAVETHTWNSVEFWKRLAP
                     CEEKLRRAQALLDKAGRNPALGPQGRVALERIAQQHRELVAAMKGQMALKEFCARLRT
                     LADRTLDGATTLELADDMIVKQDLALALKLVQDAVIDILKEAGLVKLKRVGFQDAAQA
                     GRLATFAIDYSYQGARFFDAWWNVDRILSQEEDRRMMADRMGRTIVQLTDKVVELKGD
                     LGKLDGAMKADAERQKQLLYEQRAKDYRQAHLMGEWFANESGIRAAGEPIYQEDTP"
     gene            2666..3028
                     /locus_tag="VFV26_06575"
     CDS             2666..3028
                     /locus_tag="VFV26_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HEX4845868.1"
                     /translation="MKWSIAGIGLAAALLCGCASAHRPNANPAPSKLSYGTVRIFSDP
                     PGAHIYADGEYWGETGPDKPVIRVMWNTGNRGWANLTLKKRGYKATPYRLVLRLEHDT
                     RDASERNPQKVVIVMDTE"
     gene            3079..3576
                     /locus_tag="VFV26_06580"
     CDS             3079..3576
                     /locus_tag="VFV26_06580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845869.1"
                     /translation="MLPVLLVSPVAPASTEPRPVFHQPVAAPAARLVVMVKVLAADRG
                     RPAAEDWIRKALVALGATGDVGVQADWFPLGAETVPLHDSKHFGQAALALRDPGDGKP
                     LMVEISGSHPATVALARRAGEQRLVRHTIASSIASLDFYLAFRVEAAATSPGAPSPAP
                     GGAAE"
     gene            3667..3957
                     /locus_tag="VFV26_06585"
     CDS             3667..3957
                     /locus_tag="VFV26_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2164 domain-containing protein"
                     /protein_id="HEX4845870.1"
                     /translation="MEIQLQPDVEKRLHGAIQRFVSEEYGESIGELGAGTFLRFCLVE
                     LGPAIYNQAVADAQACLQERVTDLENICFAEEASYWDRGGRKTVAHKPAGRR"
     gene            3954..4436
                     /locus_tag="VFV26_06590"
     CDS             3954..4436
                     /locus_tag="VFV26_06590"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEX4845871.1"
                     /translation="MTGVPAFRLSPVRPGEGPALLDLWRASVRATHTFLRDGDLERLV
                     PIVAATLAERTDLLCARGDWDQPLAFMGVRAGELEMLFVDPAHRGRGLGAALLTHAIQ
                     TLGVNRVDVNEQNGQAVGFYGRFGFSVAGRSPVDGLGLAYPILHMRLDGRAPLAHLEG
                     "
     gene            4470..4835
                     /locus_tag="VFV26_06595"
     CDS             4470..4835
                     /locus_tag="VFV26_06595"
                     /inference="COORDINATES: protein motif:HMM:NF014958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HEX4845872.1"
                     /translation="MPHCILEASDNLLDEPQWEALLREINQTLIATGLFTAADIKSRA
                     LRHPTFAIGDGAADQAFVTLNVQILSGRTDEVKAQLSEALLPVLARAFPRTVAQMRCS
                     LTVQITDIHRPSYRRQISP"
     gene            4844..5050
                     /locus_tag="VFV26_06600"
     CDS             4844..5050
                     /locus_tag="VFV26_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845873.1"
                     /translation="MVDAITSRQLTLLQVVAKHPDVPRDHLVKAGATDADLAYLERHD
                     LIRERAIGRYRVTHMGQAVLKRSL"
     gene            5190..>5921
                     /locus_tag="VFV26_06605"
     CDS             5190..>5921
                     /locus_tag="VFV26_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEX4845874.1"
                     /translation="MPLLTRAEATRYEETSRHADVMAFLAGLEAKGDKRLHITSFGAS
                     PQGRELPLLVLSARGAKTPEEARSLGLPVVLVISGIHAGEVEGKEGCLMLVRDLLEDK
                     PGLDAGQILAELTLVVVPLFNPDGNDTIDPGNRRLHLPKLSGQLGPDSGVGTRVNAAK
                     INLNRDYLKYESAEMRLLQTRVCQPWAADLTIDNHATNGSVHRFSMTYDIPHTVESGR
                     AEPIEYMRNRLLPPVTAALKRNHGLD"
BASE COUNT          936 a         2203 c         2008 g          774 t
ORIGIN      
        1 ggcggtccgc atggagggtg atccccaggg agatgagcgt gtcgcccacc agggtcagcg
       61 tcagcagcag cccgatgcgg gcctggctga agcccaggcc cgccaggtac agcaccagca
      121 ccacggaaag gaagccgtac gaggccatcc gcgccgcgcg ggtggcgaag agcaggcgga
      181 tgtcgggacc gaagggaacc gggggcggca tgggtcatcc agggtagcgc cggccgcggc
      241 cggtcctggg atactcgtcc catgcccccc ctgtcccgcc ccgccttccg ctggtccgtc
      301 ctcatcggcc tctgggccct ggtgggcgcg gtgctgtgga tcctgctggt gcaggccttc
      361 ctgctggccc tgaacccctt ctgccacacc cagcgcccgg gcgtggcgca cgtgcaggtg
      421 cgcagcgtgg accaggaccg ggagagccag atcaccgact tcgtgacggt gaaggacggc
      481 ggggcggagc gggtgctgcg cctggccaag gccgaggccg gggagctgcg ggtggacgac
      541 gaggtgtgga tcctcgacgc ctggtacgcg gacggcctgc ggcccacgca gttccggctg
      601 acgcccctgc gggtgctgct ggagtacccc gtcctgctgc tgctgcccgc ggcctggggc
      661 ctctggcgcg tgcgccgggc gaagcgggtg gccgacgccg ccccgccccc gcccgtgcgc
      721 cgcaccttca ccgatgactt ccacctgcgg gcccagcgct tctcgaagcc ggaggcggaa
      781 aaggcgcccc cggcccaggg cccgccgccc gatcccttcg tcccaacccc tcccggaggc
      841 accccatgac ccgaacctgg acccgaccct ggctttcccg gatccttccg gccctcctgc
      901 tcctggccgc acccgccttc gcggagcaat gcccggactg ccgccagctg gtccacacca
      961 aggacatcgg cacctgccag ctctgcacga accccaccca gagcggccag ttccccctct
     1021 gcatgacctg ctcggaccgc ctgcgggaat gcgagcggtg ccgcaaggcc ctgcccgcca
     1081 ccacgcccaa gctggatggg agcgccgacc agaccttcaa atccgggcgc tggacctacc
     1141 gcgtcgagac cttcaaccag ggcacccgca gcgagggcac ccggggcacg ctgaccttcg
     1201 ccggccagcc cctgcccgtc cccgcggcgg tgaacgacca tgtgcgcacg ccctggggcc
     1261 tcctctactg ggtgggggag cccggcacgg ccttcggcgg ccgcggctgg atgctgagag
     1321 ccaagcccag ccgccccctg ggaaaacccg tggcgccgcc cctgacgcac gcgtagacgc
     1381 cggagacggc ccaatggatc ctctggaaca tcggcggagg cggggtctat catgatgcgt
     1441 ccgtcccctt ccatccgacc cgtcgtatcc gccaggccct ctccggaggc accgccatgc
     1501 gtccgatcct cgtgctgccc ctgctgctgg cgcccaccct ggcggcccag tccctgggga
     1561 acctgcagga cttgagcgac gcctacaaca aggcccgcag cctcgcccag agctaccgcg
     1621 gcagctcccg cacctggcac gagcccgcct ggagcgcctc gccggggccc agcttcacca
     1681 aggagctgac caagactccg gaggagaagg ccatcgagaa gcgccaggag gtgctcaaga
     1741 agcgcatcgc caagctgtcc tccagccggg agcactggcg ggtcgccctg gaacggctcc
     1801 agcagaacca ggactggcgc caggagctga agtactgggc cgaggagagc caggcggccc
     1861 agttcggcgc catcatcgcc tcggtcagcc tcctggtggg cgcctccggt cccctcgagg
     1921 cggccgtgga gacccacacc tggaacagcg tggaattctg gaagcgcctc gccccctgcg
     1981 aggagaagct ccgccgggcc caggcgctcc tcgacaaggc gggccggaat ccggccctcg
     2041 gtccccaggg ccgggtggcc cttgaacgca tcgcgcagca gcaccgggag ctggtggccg
     2101 cgatgaaagg gcagatggcg ctgaaggaat tctgcgcccg gctgaggacc ctcgcggacc
     2161 gcaccctgga cggcgccacc accctggagc tggccgacga catgatcgtg aagcaggatc
     2221 tcgccctggc cctgaagctg gtccaggacg ccgtcatcga catcctgaag gaggccgggc
     2281 tcgtgaagct gaagcgggtc gggttccagg atgccgcgca ggccggccgg ctggccacct
     2341 tcgccatcga ctacagctac cagggggccc ggttcttcga cgcctggtgg aacgtggacc
     2401 ggatcctttc gcaggaggag gaccggcgca tgatggcgga ccggatgggc cgcaccatcg
     2461 tgcagctcac ggacaaggtg gtggagctca agggggatct cgggaagctg gacggggcca
     2521 tgaaggcgga cgcggagcgg cagaagcagc tgctctacga acagcgcgcc aaggactacc
     2581 gccaggccca cctcatgggc gagtggttcg ccaacgaatc gggcatccgg gcggccggag
     2641 agcccatcta ccaggaggac accccatgaa atggtccatc gccgggatcg gcctggccgc
     2701 cgccctgctc tgcggctgtg cgtcggcgca ccgccccaac gccaatccag ccccctcgaa
     2761 actctcctac gggaccgtca ggatcttctc ggacccgccc ggggcccaca tctacgccga
     2821 cggggagtac tggggggaga cgggcccgga caagcccgtg atccgggtca tgtggaacac
     2881 cggcaaccgg ggctgggcga acctgaccct gaagaagcgc ggctacaagg ccacgcccta
     2941 ccggctcgtc ctccggttgg agcacgacac gcgggacgct tccgagcgga acccccagaa
     3001 ggtggtgatc gtgatggata cggaataggc gccgcgcgcg gggaggggac catggcttgg
     3061 catgggtggc tttccggaat gctcccggtt ctgctggtgt cccccgtggc ccccgcctcc
     3121 acggagcccc gccccgtctt ccaccagccc gtggcggctc cggcggccag gctggtggtc
     3181 atggtcaagg tcctggcggc ggatcgcggc aggcccgccg ccgaggactg gatccggaaa
     3241 gccctggtgg cgctgggggc caccggcgac gtgggcgtcc aggcggactg gttccccctg
     3301 ggcgcggaga cggtccccct tcacgactcc aagcatttcg gacaggccgc cctggccctg
     3361 cgggatcccg gagacgggaa gcccctgatg gtggagatct ccggatccca ccccgccacc
     3421 gtggccttgg cgcgccgggc gggggaacaa cgcctggtca ggcacaccat cgccagctcc
     3481 atcgcctccc tggacttcta cctggccttc cgcgtggagg cggcggctac gtctccggga
     3541 gctccctccc cggcgccggg cggtgccgcg gagtgagcca tcccgccagg gctccttggc
     3601 gcagcgtttc gccccccggt caatcaccgc cacactggag gacgaagacg attctgcgag
     3661 gcccccatgg agatccagct gcaacccgac gtcgagaagc gcctgcacgg cgccatccag
     3721 cgcttcgtgt cggaggagta cggcgaaagc atcggcgagc tgggcgcggg gaccttcctc
     3781 cgcttctgcc tggtggaact cggccccgcc atctacaacc aggcggtggc cgacgcccag
     3841 gcctgcctgc aggagcgcgt cacggacctg gagaacatct gcttcgccga agaggccagc
     3901 tactgggaca ggggcggccg gaagaccgtg gcgcacaagc ccgcgggcag gcggtgaccg
     3961 gagtccccgc cttccgcctg tcgccggtgc gccccggcga ggggcccgcg ctcctggacc
     4021 tctggagggc ctcggtgcgg gccacccaca ccttcctgcg ggacggggac ctggagcggc
     4081 tcgttcccat cgtggcggcc acgctggcgg agcggacgga cctgctctgc gcccggggcg
     4141 actgggacca gcccctggcc ttcatgggcg tccgggcggg ggagctggag atgctcttcg
     4201 tggacccggc gcaccggggc cggggcctcg gggccgccct gctgacccac gccatccaga
     4261 ccctgggggt gaaccgggtg gacgtcaacg agcagaacgg ccaggcggtg ggcttctacg
     4321 ggcgcttcgg cttctccgtg gcgggccgct cgccggtgga cggcctgggc ctggcctacc
     4381 ccatcctgca catgaggctg gacggacgcg ccccgctcgc ccaccttgaa ggttgacccc
     4441 actcatggcc cccgaccgaa gagcgcccca tgccccactg catcctcgaa gcctcggaca
     4501 acctgctgga tgagccccag tgggaggccc tgctgcggga gatcaaccag acgctcatcg
     4561 ccacgggcct cttcacggcg gcggacatca agagccgggc cctgcggcac ccgaccttcg
     4621 ccatcggcga cggcgcggcg gaccaggcct tcgtcaccct caacgtgcag atcctcagcg
     4681 gccgcacgga cgaggtgaag gcccagctca gcgaggccct gctgccggtg ctggcgcggg
     4741 ccttcccccg caccgtcgcc cagatgcgct gcagcctcac ggtccagatc accgacatcc
     4801 accgccccag ctaccgccgc cagatcagcc cctaggagcc cccgtggtcg acgccatcac
     4861 ctcccgccag ctcaccctgc tccaggtggt ggccaagcac ccggacgtgc cccgggacca
     4921 cctggtgaag gccggcgcca cggacgcgga cctggcctac ctggagcgcc acgacctcat
     4981 ccgcgagcgg gccatcggac gctaccgcgt cacccacatg ggccaggccg tgctgaagcg
     5041 gagcctctga gcccgcccgc accaccgtgg ccgtggcgga gctgcccctg ggggcctccg
     5101 tggagatcga gctggtggcg aaacgctgag ggtcccgtgg acgcgggccc ccggcggcgt
     5161 gagaataccc gtcccacccc ggagccctca tgcccctgct cacccgcgcc gaagccaccc
     5221 gctacgaaga gaccagccgc cacgcggatg tcatggcctt cctcgccggg ctcgaagcca
     5281 agggcgacaa gcgcctgcac atcaccagct tcggcgcgag cccccagggc cgggagctgc
     5341 ccctgctggt gctgtcggcc cgcggggcga agacccccga ggaggcccgc agcctgggcc
     5401 tgcccgtggt gctggtcatc agcgggatcc atgcgggcga ggtggagggc aaggaaggct
     5461 gcctcatgct ggtgcgcgac ctgctggagg acaagccggg cctggacgcg gggcagatcc
     5521 tggcggagct caccctcgtg gtggtgcccc tcttcaaccc cgacgggaac gacaccatcg
     5581 atcccggcaa ccgccggctg cacctgccca agctcagcgg ccagctgggc ccggacagcg
     5641 gcgtgggcac ccgcgtgaac gccgccaaga tcaacctgaa ccgcgactac ctgaaatacg
     5701 aaagcgccga gatgcgcctg ctccagaccc gcgtgtgcca gccctgggcg gcggacctca
     5761 ccatcgacaa ccacgccacg aacggctccg tgcaccgctt ctccatgacc tacgacattc
     5821 cccacacggt ggagagcgga cgggccgagc ccatcgagta catgcgcaac cgcctgctgc
     5881 cacccgtcac cgcggccctg aaacgcaacc acggcctgga t
//
LOCUS       DASUDT010000321         2066 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_170242, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000321 DASUDT010000000
VERSION     DASUDT010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170242"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VFV26_06610"
     CDS             complement(<1..228)
                     /locus_tag="VFV26_06610"
                     /inference="COORDINATES: protein motif:HMM:NF037832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HEX4845875.1"
                     /translation="MRLLLDQNLSQRLITRLAAEYPGICHVSQWGLASASDAEVWEAA
                     RREECIIVTKDSDFVDLQVMRGFPPKVLWLRF"
     gene            complement(225..455)
                     /locus_tag="VFV26_06615"
     CDS             complement(225..455)
                     /locus_tag="VFV26_06615"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HEX4845876.1"
                     /translation="MDRSLLERITLEPGKRGGKPCIRGLRITVYDVLSYLSSGMSTAD
                     LLADFPDLVEEDVRACLAYAADRERQQYRLGA"
     gene            complement(532..930)
                     /locus_tag="VFV26_06620"
     CDS             complement(532..930)
                     /locus_tag="VFV26_06620"
                     /inference="COORDINATES: protein motif:HMM:NF013483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845877.1"
                     /translation="MDQLILQLLETHPIADQTDLLDRLSAEGHDLTQSTLSRRLKRLG
                     VQKVQGRYRRVEGSAQILPDVTIAEVPPNLLVLRTAPGFAQALGLSVDADPIPGQMGT
                     LAGDDTVFVAVLPERLAEVKAHLLRAVAGR"
     gene            1071..>2066
                     /locus_tag="VFV26_06625"
     CDS             1071..>2066
                     /locus_tag="VFV26_06625"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4845878.1"
                     /translation="MHAYAQDFRMTATLPVPALLPTYAPYPFPLVRGEGDRVFDDRGQ
                     AWWDFYGGHCVCATGHSHPKVVKAVADQAASLLFYSAAAALPVRDAAAARITAFAGMD
                     SVFFCNSGAEANENALKVALLLTGRKTLAAFDGGWHGRTTLALSVTDDPRITEPFADS
                     LTPCRRLPFGDLAALAAANFSEVAGVILEPIQSMAGIKTASKAWFEALRAKCDASGTL
                     LIFDEIQTGMGRMGTPFAAQFYGVRPDLMTSAKGLASGVPMGALLMTEDVARALRAGD
                     LGSTFGGGPLACAALLATLQVLQAEALPERALRVEAQLRARLAGSVVTEVRGTGLL"
BASE COUNT          332 a          725 c          670 g          339 t
ORIGIN      
        1 gaaccgaagc cagagcacct tgggcgggaa tcccctcatc acctgaaggt ccacgaaatc
       61 cgaatccttg gtaacgatga tgcattcctc gcgccgggcc gcttcccaaa cctccgcatc
      121 gctggcggag gccagccccc attgagagac gtggcagatg ccggggtatt cagcggccaa
      181 tcgtgtgatc agccgctggg acaggttctg gtccagcagg agtctcatgc tccgagtcgg
      241 tactgctggc gttcgcgatc cgcggcgtag gccaggcacg cccggacatc ctcctccacc
      301 agatcgggga agtcagccag cagatcagcc gtgctcatcc cggacgagag gtacgaaagc
      361 acatcgtaga ccgtgatgcg caggccccgg atacaaggct tcccgccccg cttgccgggt
      421 tccagcgtga tccgttcgag aagactccgg tccatgggat tcgatcctga caggtccagg
      481 gtaggtcatc acggttggcg cgccaatggc aaggacagga gatcccagtc tttaccgccc
      541 cgccaccgcc cgcagaagat gggccttcac ctcggccagg cgctcgggca gcaccgccac
      601 gaacacggtg tcgtcgcccg ccagggtgcc catctggccg gggatggggt cggcgtccac
      661 gctgaggccc agggcctggg cgaagcccgg cgcggtgcgc agcaccagca ggttgggcgg
      721 cacttcggcg atggtcacat ccggcaggat ctgggcggag ccctccaccc ggcggtagcg
      781 gccctggacc ttctgcaccc ccaggcgctt gaggcgtcgc gacagggtgg actgggtgag
      841 gtcgtggcct tcggcggaca ggcggtccag caggtccgtc tggtccgcga tggggtgggt
      901 ctccagcagc tggaggatga gctgatccaa gtccatgcat gaatgttgca tgaatttgca
      961 tgagtctgca agtcgcgtgc atcaaaaatc aacatttcat gaaatttcgc ttgattcacg
     1021 tgattcaatc tgtgcatatt atgcattcga ttgcatgaat atgcatcacc atgcacgcct
     1081 atgcacagga cttccgcatg accgccaccc ttcccgtccc cgccctgctc cccacctacg
     1141 ccccctatcc ctttcccctg gtgaggggcg agggcgaccg ggtcttcgac gaccggggcc
     1201 aggcctggtg ggacttctac ggcggccact gcgtgtgcgc cacgggccac agccacccca
     1261 aggtggtgaa ggccgtggcg gaccaggcgg cctcgctgct cttctactcc gccgccgcgg
     1321 ccctgcccgt gcgggatgcc gccgccgcga ggatcacggc cttcgccggg atggactcgg
     1381 tcttcttctg caacagcggc gccgaggcca acgagaacgc cctgaaggtg gcgctgctcc
     1441 tcacgggccg gaagacgctc gccgccttcg acggcggctg gcacggccgg accaccctgg
     1501 ccctgtccgt caccgacgat ccaaggatca cagagccctt cgcagacagc ctcaccccct
     1561 gccggcgcct gcccttcggc gacctggcgg ccctcgccgc ggcgaacttc tccgaggtgg
     1621 ccggcgtcat cctcgagccc atccaaagca tggccggcat caagaccgct tcgaaggcct
     1681 ggttcgaggc cctgcgggcc aagtgcgacg ccagcggcac cctgctcatc ttcgacgaga
     1741 tccagacggg catgggtcgc atgggcacgc ccttcgccgc ccagttctac ggcgtgcgcc
     1801 ccgacctcat gacctccgcc aagggcctgg cctccggcgt gcccatgggc gcgctcctga
     1861 tgaccgagga cgtggcgcgc gcgctgcgcg ccggagacct cggctccacc ttcggcggcg
     1921 gcccgctcgc gtgcgccgcg ctcctggcca ccctgcaggt gctgcaggcc gaggcgctgc
     1981 ccgagcgcgc cctgcgcgtg gaggcgcagc tgcgcgcgcg gctcgcgggc agcgtcgtca
     2041 cggaggtgcg tgggacgggg ctcctg
//
LOCUS       DASUDT010000322         4980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1340562, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000322 DASUDT010000000
VERSION     DASUDT010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4980
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340562"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VFV26_06630"
     CDS             <1..482
                     /locus_tag="VFV26_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011551594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEX4845879.1"
                     /translation="FDVVCKVDLDEVKNAVSQAMKEIGQRYDFKGSVSKIELKDDKVL
                     VLNSDDEVKLKAVIDVLQTKLHKRGVSIRSMEYGKIEPASKGTVRQEVTIHQGIPVDK
                     AKGLIKAVKDAKIKVQASIQGDQLRVSGKSRDDLQEVIALFKKDDQGLDLQFTNYRG"
     gene            484..1479
                     /locus_tag="VFV26_06635"
     CDS             484..1479
                     /locus_tag="VFV26_06635"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX4845880.1"
                     /translation="MSRLDLSRYFLPIAPKLAGVEAELQRILQSDVEVVQKLADHVRG
                     GQGKRLRPALVMLASRFCGVSSEEDVRFGAVFELIHTATLVHDDVIDHAQLRRGMPTL
                     NRLWGNTLTVLFGDLLYLVAMNEAIAGRSWRMMEIFAEVTTRMIEGELIQNDVLFKLD
                     TTRKDYFDIQERKTALLFSGCTETGAVLTGRSQDECAAMRQYGLEVGRAFQLVDDLLD
                     YTATSEQLGKPAFSDLREGKLTLPMLTLLEKAPDETRELIRTIWDRGEEVPIPADEEA
                     RLRALIERHDTLSETRDLALKASKNAVAQLSAVAGDAATGILLREIPEALLSRSM"
     gene            complement(1489..3042)
                     /locus_tag="VFV26_06640"
     CDS             complement(1489..3042)
                     /locus_tag="VFV26_06640"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX4845881.1"
                     /translation="MAQLDRLLSHVIAKGGARLRLEADKKPRLELKNGEALDLLPNPL
                     PTVMVEVLAGEVIPEALKATWQKDGRAEFEHDLSGQTFVIRLSRYMEAPLIIAEHQGP
                     ARPQPKFSPAPAPAPTPAPAALAAAAPAPKAAPMAPLPQTPRPDRSQGHPLAERLFSA
                     LLAQQGSDLHCTSLEPPLARIHGDMKELEGFGPLQPATLLEMMEAVATPTAWRHFQER
                     HDADFAYAYEAGGCRLRVNYFMDRVGPGLVCRVIPNAIPDPDKLGLPDPVRRLCDLAK
                     GLVLVTGPTGSGKSTTLAAILDLANQKRRDHILTIEDPIEFVHPRKGCLVNQREVGAH
                     TDSFKNGLRAALREDPDIVMVGEMRDLETIAIALETAITGHLVFGTLHTSSAIGTIDR
                     IVDQFPADRQQQIRVMLADALKCVVSQTLLKKIGGGRIAALETLFISPAIANLIREGK
                     NFQIPSAMQTGRSYGQRLMNDALVELIKDKKVEPMEAYLKCPDKESFIAACKRAGIPF
                     DLRLGEVEA"
     gene            3148..4305
                     /gene="sucC"
                     /locus_tag="VFV26_06645"
     CDS             3148..4305
                     /gene="sucC"
                     /locus_tag="VFV26_06645"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX4845882.1"
                     /translation="MNIHEYQAKELLRQYKVATPDGKVAQDAEEARMITKEFGGASVV
                     KAQIHAGGRGKGGGVKFATDPDKAAELFKAMIGMQLVTKQTGAEGRKVRTVFLSKPVD
                     IERELYLSYLVDRVTSRITILASTEGGVEIEEVAEKTPEKIVKVAVDPALGLSGFQAR
                     QVAFALGLEGNAFKQGVVFLQNLYRLFVEKDCSMVEINPLVITKQGDVTALDAKIGFD
                     DNGLVRHPDVLAYRDLNEEAEEEVEASKYNLNFIKLDGSIGCMVNGAGLAMATMDIIK
                     YCGSSPANFLDVGGSATEDAVKNAFRIILQDKAVKAVLVNIFGGIMRCDIVAAGIVNA
                     AKEIGIKVPVVVRLEGTNVEEGKKILADSGLNLIVAANLQDAAEKVVASIK"
     gene            4350..>4980
                     /locus_tag="VFV26_06650"
     CDS             4350..>4980
                     /locus_tag="VFV26_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX4845883.1"
                     /translation="MAVLVGNHTKLIVQGITGREGLFHAKGCRDYGTNVVGGVTPGKG
                     GTEIEGFPVFNTVQEAVAKTGANATMIFVPPVAAADAILEALDAGIELVVCITEGLPV
                     LDMVKVKRVLPNYPKSRLIGPNCPGIISPGLAKIGIMPGRIHKQGHVGVVSRSGTLTY
                     EAVGQLTALGIGQSTCIGIGGDPVSGTSHIDALEMFNNDPDTHAVIMIGE"
BASE COUNT          900 a         1595 c         1696 g          789 t
ORIGIN      
        1 cgtttgatgt cgtctgcaag gtggacctgg acgaggtgaa gaacgccgtg tcccaggcca
       61 tgaaggagat cggccagcgt tacgacttca agggctcggt ctccaagatt gagctcaagg
      121 acgacaaggt gctggttctc aacagcgatg acgaagtgaa gctcaaggcc gtcatcgatg
      181 tgctccagac caagctccac aagcgggggg tgagcatccg cagcatggaa tacggcaaga
      241 tcgagcccgc ctcgaagggc acggtccgcc aggaggtcac catccaccag ggcattcccg
      301 tggacaaggc caagggcctc atcaaggctg tcaaggacgc caagatcaag gtccaggcca
      361 gcatccaggg cgaccagctc cgcgtcagcg ggaagagccg ggacgacctg caggaagtca
      421 tcgccctgtt caagaaggac gatcaggggt tggacctgca gttcaccaac taccggggct
      481 gacgtgtcac gactggatct ctcgcgctac ttcctcccca tcgcccccaa actggccggt
      541 gtggaggcgg agctgcagcg catcctgcag agcgatgtgg aggtggtcca gaagctggcg
      601 gaccatgtcc gcggagggca ggggaagcgc cttcggccgg ccctggtgat gctggcctcg
      661 cggttctgcg gcgtgtccag cgaggaggat gtgcgcttcg gggcggtctt cgagctgatc
      721 catacggcca ccctcgtgca cgacgatgtc atcgaccacg cccagctccg gcggggcatg
      781 cccaccctca accggttgtg gggaaacacc ctgacggtgc tcttcgggga tctgctctac
      841 ctggtggcca tgaacgaggc catcgccggg cgcagctggc ggatgatgga gatcttcgcg
      901 gaagtgacca cccgcatgat cgagggcgag ctcatccaga acgatgtgct cttcaagctg
      961 gataccaccc gcaaggacta cttcgacatc caggagcgca agaccgccct gctgttcagc
     1021 ggctgcacgg agaccggggc cgttctcacg gggcggagcc aggatgaatg cgccgccatg
     1081 cgccagtacg gcctggaggt ggggcgcgcc ttccagctgg tggacgacct gctggactac
     1141 accgccacca gcgagcagct gggcaagccg gccttcagcg acctgcggga agggaagctc
     1201 accttgccca tgctcacgct cctggagaag gcaccggacg agacgcgtga gctcatccgg
     1261 accatctggg accggggcga ggaggtgccc atcccggcgg acgaggaagc ccggctgcgg
     1321 gccctcatcg aacggcatga caccctctcg gaaacccgcg acctggccct caaggcctcg
     1381 aagaatgccg tggcccagct ctccgcggtg gcgggcgacg ccgccaccgg gatcctgctg
     1441 cgggaaatcc ccgaggccct gctgtcgcgc agcatgtgag cgccgggctc aggcttccac
     1501 ttctcccagc cgcaggtcga aggggatgcc ggcccgcttg caggccgcga tgaagctctc
     1561 cttgtcgggg cacttgaggt aggcctccat gggctccacc ttcttgtcct tgatgagctc
     1621 caccagggcg tcattcatga gccgctggcc gtagctccgc cctgtctgca tggcgctggg
     1681 gatctggaag ttcttcccct cgcggatgag gttggcgatg gcggggctga tgaagagcgt
     1741 ctccagggcg gcgatgcgtc cgccgccgat cttcttgagc agggtctggc tcaccacgca
     1801 cttcagcgcg tccgcgagca tcacgcggat ctgctgctgc cggtccgccg ggaactggtc
     1861 cacgatgcgg tcgatggtgc cgatggcgct gctggtgtgg agggtgccga agaccaggtg
     1921 gccggtgatg gccgtctcca gggcgatggc gatggtctcc aggtcgcgca tctcacccac
     1981 catcacgatg tcgggatcct cgcggagggc cgcgcgcagg ccgttcttga agctgtccgt
     2041 gtgggcgccc acctcacgct ggttcaccag gcagcccttg cggggatgca cgaactcgat
     2101 gggatcctcg atggtgagga tgtggtcccg ccgcttctgg ttggcgaggt cgaggatggc
     2161 ggccagggtg gtggacttgc cgctgcccgt ggggcctgtc acgagcacca ggcccttggc
     2221 gagatcgcag aggcggcgga cgggatcagg caggcccagc ttgtccggat cggggatggc
     2281 gttggggatg acgcggcaga ccaggccagg cccgacccgg tccatgaagt agttcacccg
     2341 gaggcggcag ccgccggcct cgtaggcata ggcgaaatcc gcatcgtgac gctcctggaa
     2401 gtgccgccag gcggtggggg tggccacggc ctccatcatc tccagcaggg tggccggttg
     2461 cagcgggccg aacccctcca gctccttcat gtcgccgtgg atgcgggcca ggggcggttc
     2521 cagggaggtg cagtgcaggt ccgagccctg ctgggccagc agggcggaaa agagccgctc
     2581 ggccaggggg tggccctggc tgcggtccgg cctgggagtc tgggggagag gtgccattgg
     2641 cgccgccttg ggcgcggggg cggccgccgc caaggccgca ggggccggcg tcggcgctgg
     2701 cgcgggcgcc gggctgaact tgggctgcgg acgggcaggg ccctggtgct ccgcgatgat
     2761 gagcggggcc tccatgtagc ggctcaggcg gatgacgaag gtctggcccg agaggtcatg
     2821 ctcgaattcg gcccttccat ccttctgcca ggtggccttg agagcctctg ggatgacttc
     2881 tcccgccagc acctcgacca tcaccgtggg cagggggttg ggcagcaggt ccaaagcctc
     2941 gccgttcttg agttcgaggc ggggcttctt gtcggcctcc aggcggagcc gggcgccgcc
     3001 cttggcgatg acgtgggata gcagccgatc cagctgggcc atgaacgcct cctgaggcac
     3061 tcaaaggatg ccacgggtca cagccttcgg ggttcggacc tgacggcccg gccgctagac
     3121 tggaagacga cccttctcgg agtgaccatg aacatccacg aataccaagc caaggaactg
     3181 cttcggcagt acaaggtggc cacgccggac gggaaggtgg cccaggacgc cgaggaagcc
     3241 cgcatgatca ccaaggaatt cggcggcgcc agcgtcgtga aggcccagat ccacgccggt
     3301 ggccgtggca agggcggcgg cgtgaaattc gcgacggatc ccgacaaggc cgccgagctg
     3361 ttcaaggcca tgatcggcat gcagctggtc accaagcaga ccggcgccga aggccgcaag
     3421 gtccgcacgg tgttcctctc caagcccgtg gacatcgagc gggagctcta cctgagctac
     3481 ctggtggacc gcgtcaccag ccggatcacc atcctggcct ccaccgaagg cggcgtggag
     3541 atcgaggaag tcgccgagaa gacccccgag aagatcgtca aggtggccgt ggatccggcc
     3601 ctgggcctca gcggcttcca ggcccgccag gtggccttcg ccctggggct cgaaggcaac
     3661 gccttcaagc agggcgtggt cttcctccag aacctctacc ggctcttcgt ggagaaggac
     3721 tgctccatgg tggagatcaa cccgctggtg atcaccaagc agggggatgt cactgccctg
     3781 gacgccaaga tcggcttcga tgacaacggc ctggtccgcc acccggatgt gctggcctac
     3841 cgcgacctca acgaggaagc ggaggaggaa gtggaagcca gcaagtacaa cctcaacttc
     3901 atcaagctgg atggcagcat cggctgcatg gtgaacggcg ccggcctggc catggccacc
     3961 atggacatca tcaagtactg cggcagctcc ccggccaact tcctggacgt gggcggcagc
     4021 gccaccgagg atgcggtgaa gaacgccttt cgcatcatcc tccaggacaa ggccgtgaag
     4081 gccgtcctgg tgaacatctt cggcggcatc atgcgctgcg acatcgtggc ggcgggcatc
     4141 gtgaatgcgg cgaaggagat cggcatcaag gtgccggtgg tggtgcggct tgagggcacc
     4201 aacgtcgagg aggggaagaa gatcctcgcg gacagcggcc tgaacctcat cgtcgccgcg
     4261 aacctgcagg acgccgccga gaaggtggtt gcttccatca agtaggtttt ccacagaacc
     4321 tgactgaatc cattttcgcg aggtatgaca tggcagttct cgtgggcaac cacaccaaac
     4381 tcatcgtcca gggcatcacc ggccgtgaag gactcttcca cgccaagggc tgccgcgact
     4441 acggcacgaa cgtggtcggc ggcgtgaccc ccggcaaggg cggcaccgag atcgaaggct
     4501 tcccggtctt caacaccgtc caggaggccg tggccaagac tggcgccaac gccaccatga
     4561 tcttcgtccc ccccgtggcc gccgcggacg ccattctcga agccctggat gcgggcatcg
     4621 agctggtcgt ctgcatcacc gagggcctcc ccgtcctcga catggtcaag gtcaagcggg
     4681 tgctccccaa ctaccccaag agccgcctca tcggccccaa ctgccccggc atcatcagcc
     4741 ccggcctggc caagatcggc atcatgcccg gccgcatcca caagcagggg catgtgggcg
     4801 tggtcagccg ctccggcacc ctcacctatg aggcggtggg ccagctcacg gccctgggca
     4861 tcggccagag cacctgcatc ggcatcggcg gcgaccccgt cagcggcacc agccacatcg
     4921 acgcgctgga gatgttcaac aacgacccgg acacccacgc cgtcatcatg atcggggaga
//
LOCUS       DASUDT010000323         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1672357, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000323 DASUDT010000000
VERSION     DASUDT010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672357"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..632
                     /locus_tag="VFV26_06655"
     CDS             111..632
                     /locus_tag="VFV26_06655"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEX4845884.1"
                     /translation="MPLIALLDGLPAGASMWKLAQPWWEFVLRALLVYGFLLVALRLT
                     GKRQVGQLTPFDLVLLLVLSNAVQNSMNAGDNTVTVGFILVATLLAANGLMSWLTWRS
                     KRAEILLEGRPQILVHNGALDEAMLASGRITHHELMAALRQAGISDLADVRVAILETN
                     GRINVIAKGSPAP"
     gene            663..1550
                     /locus_tag="VFV26_06660"
     CDS             663..1550
                     /locus_tag="VFV26_06660"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX4845885.1"
                     /translation="MTPLLPPSDPPLPFKDLLVEPEEARSILRPQKDERYGFGFALSP
                     YRGCGHGCRYCYVREYPNALHKPEDWGGWVAPKLNALELLWSQRHRLHDQRVFMASAT
                     DPYQPLERQYRLSRRCLEVLLLCPTTEVIVHTRSPLVLQDLDLLKAFGPRLSVGLSIP
                     TDDDTVRQVVEPHAPAIPSRWAAAERLAAAGIAVTVGVAPLLAVHDPQAFARRARASG
                     ASNAWVGGLRLLKQDPFYKVLADRGWLKVLDPAYAESIRLAFREVFPARRRIRERPEK
                     PEPPPPPPIRQPGLFDRVS"
     gene            1588..>2076
                     /locus_tag="VFV26_06665"
     CDS             1588..>2076
                     /locus_tag="VFV26_06665"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4845886.1"
                     /translation="MSTLALKYRPRLLSDLVGQEGSVKALANALKRAKESGRIHQAYL
                     FAGVRGTGKTSTARILARALNCAEGPTATPCGVCDPCRAAEQPDSSLDIVEIDAASRA
                     SVADARALREQVQTRPAFCRYRVYIIDEVHMLSTQAFDALLKLLEEPPPHAVFVLATT
                     ELH"
BASE COUNT          323 a          744 c          691 g          318 t
ORIGIN      
        1 gccgaactgg gcaaggccga cttcacggtc gagatccagt agactgccca cagcacaaag
       61 aaccggtgcc ctgccgggcg ccggttcttt gcgtgtccac gggaggcccc atgccgttga
      121 tcgccctgct agacggactg ccggcgggtg cctccatgtg gaagcttgcc caaccctggt
      181 gggagttcgt cctccgggcc ctgctggtgt acggctttct cctggtggcg ctgcgcctga
      241 cgggcaagcg ccaggtgggg cagctgactc cgttcgacct ggtgctgctc ctggtgctga
      301 gcaatgccgt gcagaacagc atgaatgccg gggacaatac ggtgacggtg ggcttcatcc
      361 tggtggccac gctgctggcg gcgaacggtc tcatgtcctg gctgacctgg cgcagcaagc
      421 gggcggagat cctgctggag ggccgcccgc agatcctggt gcacaacggg gcgctggacg
      481 aggcgatgct ggcctcggga cgaatcacgc accatgagct gatggctgcc ctgcggcagg
      541 cggggatctc ggacctggcg gatgtccggg tggccatcct ggagaccaac gggcgcatca
      601 atgtcatcgc caaaggctca ccggcccctt gacttgacga acaaaaagcg aaaactggag
      661 ccatgacacc cctcctgccg ccttcggatc cgccgctgcc gttcaaggac ctgctcgtgg
      721 aaccggagga ggcacggtcc atcctgcggc cgcagaagga tgagcgctac ggcttcgggt
      781 tcgctctgag cccctaccgg ggatgcggcc acggctgccg ctactgctac gtccgcgagt
      841 acccgaatgc gctgcacaaa cccgaggact ggggcggctg ggtggccccc aaactgaacg
      901 ccctggagct gctgtggtcc cagcggcacc gcctccacga ccagcgggtc ttcatggcct
      961 cggccacgga cccctaccag cccctggagc ggcagtaccg gctgagccgc cgctgcctgg
     1021 aggtgctgct gctctgtccc accaccgaag tgatcgtcca cacccgctcg cccctggtgc
     1081 ttcaggatct ggacctgctg aaggccttcg ggccgcggct cagcgtggga ttatccatcc
     1141 ccacggacga cgacacggtg cggcaggtcg tggaacccca cgctccggcc attcccagcc
     1201 gctgggccgc cgcagagcgc ctggcggccg caggcatcgc cgtgaccgtg ggcgtggcgc
     1261 ccctgctggc ggtgcatgat ccacaggcct ttgcccgccg ggcccgggcc agcggcgcgt
     1321 cgaatgcctg ggtgggtggc ctccgcctgc tgaagcagga tcccttctac aaggtgctgg
     1381 cggatcgcgg ctggctgaag gtgctggatc ccgcctatgc cgaaagcatc cgcctggcct
     1441 tccgggaagt gttcccggcc cgccgccgga tccgggagcg gcccgagaag ccggagccgc
     1501 caccgccgcc gcccatccgc caaccgggcc tgttcgatcg cgtgagctga ggatgccggc
     1561 gcccacttgt gggagactgg atctcccatg agcaccctcg ccctcaaata ccgtccccgc
     1621 ctgctctccg acctcgtggg gcaggagggc agcgtcaagg ccctggccaa cgccctgaag
     1681 cgggccaagg agagtggccg catccaccag gcctacctct tcgccggcgt gcgcggcacg
     1741 ggcaagacca gcacggcgcg catcctggcc cgggccctga actgcgcgga aggccccacg
     1801 gccacgccct gcggcgtctg cgatccctgc cgggcggcgg aacagcccga cagcagcctg
     1861 gacatcgtcg agatcgacgc cgccagccgc gcctccgtgg ccgacgcgcg cgccctgcgg
     1921 gagcaggtgc agacccggcc cgccttctgc cgctaccgcg tctacatcat cgacgaagtg
     1981 cacatgctca gcacccaggc cttcgacgcc ctgctgaagc tgctggagga gccgccgccg
     2041 cacgcggtct tcgtgctcgc caccaccgag ctgcac
//
LOCUS       DASUDT010000324         2090 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_82002, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000324 DASUDT010000000
VERSION     DASUDT010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82002"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..740
                     /locus_tag="VFV26_06670"
     CDS             159..740
                     /locus_tag="VFV26_06670"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX4845887.1"
                     /translation="MIRPFQGMVPKLGSRVFIPDSALVLGDVAIGDDASIWFNCVLRG
                     DVNWIRIGARTNIQDACCLHVTNGKWPLLIEEEVSIAHNVMLHGCTIRKNALIGMSTT
                     IMDGAEIGEGCLVAAGSLVREGLQAPPHSLVAGWPAEVKGPLSEKQRALVASVWPRYV
                     RYKEAYFADGWPVAAAPTVDAPQPGFAEGHPYP"
     gene            complement(788..1546)
                     /locus_tag="VFV26_06675"
     CDS             complement(788..1546)
                     /locus_tag="VFV26_06675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845888.1"
                     /translation="MSDAFPTSTPVPAPGAKAAKVCGILAIVFAFTCVGIPVAIVLAI
                     VALVQQGKAKRLAKADPQAYLPVSATGLVTGIIGLVLPVLMLPILGIGAALSMPALLS
                     TREHARAMAVQRTLDLTQAKAEAAVSAWQIQNPGQPPSQEAIINAQSTVIKALLKEPE
                     LLALKNPMDPKAPAIAAGQAGALGTTMIFADREEEGGVITWSIRLQARVRRGGGEQVL
                     ERQVIIHTQEQVHGRTEDGWEVVNPPVEAPAPQD"
     gene            1649..>2090
                     /locus_tag="VFV26_06680"
     CDS             1649..>2090
                     /locus_tag="VFV26_06680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845889.1"
                     /translation="MSPLLILRVHADLRLGLGHVARALALQEAWRALGGQACIAVSGD
                     ERARRVGSGRHPFLDQPLPCEAVDLGEAIHAPLPAGLKARGTAVLVDQWDTSTAFLQG
                     LRPLKVAVMEDDTDAHETADLLFQPFLEGVRWPDHPVKVVDGRKV"
BASE COUNT          301 a          727 c          718 g          344 t
ORIGIN      
        1 ccaggctttc agccgaggtg gcgctccagc ccaggggcat ggggtctgtg tccaggagcc
       61 ctcgtagctt ctcttttcat ccgtgttcat ccgtgttcat ccgtggctga atatcttttt
      121 ggccaccttc accaaccggg ccttccatcg aggtgttcat gatccgcccc ttccaaggca
      181 tggtccccaa gctcggttcg cgggtcttca tcccggacag cgcgctggtg ctgggcgacg
      241 tggccatcgg cgatgacgcc agcatctggt tcaactgcgt cctccgcggc gacgtgaact
      301 ggatccgcat cggggcccgc accaacatcc aggacgcctg ctgcctgcac gtcaccaacg
      361 ggaagtggcc cctgctcatc gaggaggagg tcagcatcgc ccacaacgtg atgctgcacg
      421 gctgcaccat ccggaagaac gccctcatcg gcatgagcac cacgatcatg gatggcgccg
      481 agatcggcga gggctgcctc gtggccgcgg gcagcctggt gcgcgagggc ctccaggccc
      541 cgccccacag cctggtggcg ggctggcccg cggaagtgaa gggccccctc agcgagaagc
      601 agcgcgcgct ggtggcttct gtctggcccc gctacgtgcg ctacaaggag gcctacttcg
      661 cagatggctg gcccgtagcc gccgcgccca cagtggatgc cccccagccc ggtttcgccg
      721 aggggcatcc ctatccctga cccaccgcca ggtggccatg ccatgggccg ccaggtgcca
      781 tcccggctca gtcctggggt gcgggcgcct ccaccggcgg gttcacgacc tcccacccat
      841 cctcggtgcg gccgtgcacc tgctcctggg tgtggatgat gacctggcgt tcgaggacct
      901 gctcgccccc cccgcgacga acccgcgcct gaagcctgat ggaccacgtg atgacgccgc
      961 cttcctcctc ccggtcggcg aagatcatgg tggtccccag ggcgccggcc tgtcccgccg
     1021 cgatcgccgg agcctttgga tccatggggt tcttgagcgc cagcagttcg ggctccttca
     1081 gcagcgcttt gatgacggtg ctctgggcgt tgatgatggc ttcctgggac gggggttggc
     1141 cggggttctg gatctgccag gcggacacgg cggcctcggc cttggcctgc gtcaggtcga
     1201 gggtgcgctg gacggccatg gcccgggcat gttcccgggt ggacaggagg gccggcatgg
     1261 agagggcggc tccgatgccc agaatgggca gcatgagcac cggcaacacc aggccgatga
     1321 tgcccgtgac caggcccgtg gcggacaccg gcaggtaggc ctggggatcc gccttggcca
     1381 ggcgcttggc cttgccctgc tgcaccaggg ccacgatggc cagcacgatg gccacgggga
     1441 tgcccacgca ggtgaaggcg aagacgatgg cgaggatgcc gcagaccttg gcggccttgg
     1501 cgccgggggc cggaacgggg gtggacgtcg ggaaggcgtc ggacatgggc gtctccaatg
     1561 ggtgatgggt tcagcatccc agaaggaggt gctccccgga agatcgtccc tcccgcccct
     1621 tgactccctc ggctagactc tcgggatcat gtcccccctg ctgatcctcc gcgtccacgc
     1681 tgatctgcgc ctcgggctgg gccatgtggc ccgggcgctc gccctccagg aagcctggcg
     1741 cgccctgggc ggccaggcct gcatcgccgt ctcgggcgac gagcgggccc gccgggtcgg
     1801 cagcggccgg cacccgttcc tcgaccagcc cctgccctgc gaagccgtcg acctgggcga
     1861 agccatccat gcgcccctgc ccgcaggcct gaaagcgcgg ggcacggcgg tgctggtgga
     1921 ccagtgggac accagcaccg ccttcctcca gggcctgcgc cccctgaagg tggccgtcat
     1981 ggaggacgac acggacgccc acgagacggc ggacctgctc ttccagccct tcctggaggg
     2041 cgtgcgctgg ccggaccatc cggtgaaagt ggtggatggg cgcaaagtgc
//
LOCUS       DASUDT010000325         3378 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_567937, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000325 DASUDT010000000
VERSION     DASUDT010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567937"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VFV26_06685"
     CDS             complement(<1..722)
                     /locus_tag="VFV26_06685"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845890.1"
                     /translation="MACVFSAFLRLLLASGILAFLLACGGGSGSTEAPPAGPRLTTPP
                     VAQAGYRGDVVTYRVLAEGTGHSYQWFRNGTAIPGATTDSYALPVQAVDDQARFSVRV
                     TASAGGATTSPEALLDVLYADPAVVAGHDHALAITTKGKVYAWGVGGNGQLGLGDYQA
                     RMAPTAVPLPGPAVQVAAGWGHSLALLADGRVFAWGNNASGQLGDGTTTARTTPRQMG
                     TARDWQAITAGGGHTVALKGDGT"
     gene            complement(795..2363)
                     /locus_tag="VFV26_06690"
     CDS             complement(795..2363)
                     /locus_tag="VFV26_06690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845891.1"
                     /translation="MRNRWNMPALTCVLACQALTAQQSPAQPAAPGPVLAYQGRLLEA
                     ALPVTGTRAFVFSILDGSGAELWTSGSQPISVNSGLYSAALGAAPMPAIPATLLGQPN
                     LKLHVTVAGIALAPDTELVPALQARSAFEVSGSFAGDVGGTQNAMAVLQLQGVPLDLT
                     SAAPAAGQGLLFNGAKWVPGTVTGAQGPAGPAGPVGPTGPQGPAGPAGATGAAGPAGA
                     TGAAGPQGPAGPTLNLQKIALLKWYSASRINATFAAPIAPYQMCYDGANLWVTSDSST
                     RAVTKLNASSGAQVGTYPVGGGPSGVAFDGAHVWIANSSDNTVSKLKASDGSLVGTYA
                     VGTSPNGVCFDGTFIWVANSQSNNLTKLNPSSGAMLGTFSVGTYPVAICFDGSHLWVA
                     NYSQSTLSKVDPGNGAIVGTFSGGSYPYALCFDGTHVWSANRYGNSVSKLVAATGAQV
                     GSYAVGANPVGICFDGRSIWTTNLGSNDVTQLDAATGGLVGTYPTGGQPWGTCFDGAS
                     VWVANRLADTLTRF"
     gene            complement(2405..2989)
                     /locus_tag="VFV26_06695"
     CDS             complement(2405..2989)
                     /locus_tag="VFV26_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845892.1"
                     /translation="MNRRFQLLLGTALLSSLLACGGGGGGSTATPPAAADFSLQVTPG
                     NLQIPAGGSGFITITLSRLNGFTSAVAITGVGFPAGVAASGTVPAGSTMLQLPVAVAP
                     GVAPSAYTGLSLRAQAGTLSHDMPFQLTVVQALALGQLSDDLVQAAGGRQTGGTFENQ
                     AIVREGFPALVAKDANDTTRVRHGFHPSGVPTEH"
     gene            complement(3081..>3378)
                     /locus_tag="VFV26_06700"
     CDS             complement(3081..>3378)
                     /locus_tag="VFV26_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845893.1"
                     /translation="GTPRTILPMPTTTEVMVGTRDASGRPALLWIQRGTGGVHEGVGF
                     SRWDGAAWTAPAILPGTAGKSIQRLFAVPGPMGLLAGWVEAGDQTLLFRTALWK"
BASE COUNT          507 a         1136 c         1243 g          492 t
ORIGIN      
        1 gtgccgtcgc ccttgagggc gacggtgtgg ccgccgccag cggtgatggc ctgccagtcg
       61 cgggcggtgc ccatctgccg cggggtggtt cgggcggtgg tggtgccatc gccgagctgg
      121 cccgaggcgt tgttccccca ggcgaagacg cggccatcgg ccagcagagc cagggagtgc
      181 ccccagcccg ccgccacctg caccgccggg ccgggcagag gcacggccgt gggcgccatg
      241 cgggcctggt agtcccccag gcccagctgg ccgttgccgc ccacgcccca ggcgtagacc
      301 ttccccttgg tggtgatcgc cagggcatga tcgtggcccg ccaccaccgc cggatcggca
      361 tagagcacat ccagcagcgc ctcggggctg gtggtggcgc ctccggcgga ggcggtgacc
      421 cgcacgctga agcgggcctg gtcatccacc gcctgcacgg gcagggcgta ggaatcggtg
      481 gtggcgccgg ggatggccgt gccattgcgg aaccactggt agctgtggcc agtgccttcg
      541 gccagcaccc ggtaggtcac cacatcgccc cggtagcccg cctgggccac cggcggagtg
      601 gtcaaccggg ggcccgcggg cggagcctcc gtgctgccgg agccgccgcc gcaggcgagc
      661 aggaaggcca ggatgccgct ggcaagcaga aggcgcagga aggcggaaaa cacgcaggcc
      721 atggtcggct ccaggaatgg gatttcaggc agggattcgg gttccgggca gtgcggctga
      781 aaggcccggc cctctcagaa ccgggtcagg gtatcggcca gtcggttcgc cacccagacg
      841 ctggcgccat cgaagcaggt gccccagggc tgcccgcctg tcggataggt gccgaccagg
      901 cctccggtgg ccgcatccag ctgggtcaca tcgttggaac cgagattggt cgtccagatg
      961 ctgcggccat cgaagcagat gcccacggga ttggccccca ccgcatagct gcccacctgg
     1021 gcccccgtgg cggccacaag cttggagacg ctgttcccgt agcgattcgc tgaccagacg
     1081 tgggtgccat cgaagcagag ggcgtaggga taggatcccc cgctgaaggt gcccacgatg
     1141 gccccgttcc cgggatccac cttgctcagg gtggactgcg agtagttggc cacccagaga
     1201 tggctgccgt cgaagcagat ggccacgggg taggtcccca cgctgaaggt gcccagcatc
     1261 gctccggaac tggggttcag cttggtgagg ttgttcgact ggctgttggc cacccagatg
     1321 aaggtgccgt cgaagcatac gccattcggc gaggtcccca ccgcataggt gcccaccagg
     1381 ctgccgtcgc tggccttcag cttgctgacg gtgttgtcag acgagttcgc gatccagaca
     1441 tgggcgccat cgaaggcgac tccggagggg cctcccccga ccggataggt gcccacctgg
     1501 gctccgctgc tggcgttgag cttggtgacg gccctggtgc tgctgtcgct ggtcacccag
     1561 aggttcgcgc cgtcgtagca catctggtag ggcgcgatgg gggccgcaaa ggtggcattg
     1621 atcctggagg cgctgtacca cttcagcagc gcgatcttct gaaggttgag cgtgggaccc
     1681 gccgggccct gggggccagc cgcgcccgtc gcgcccgcgg gtccggcggc gcccgtcgca
     1741 cccgccggtc ctgcggggcc ctgggggccg gtgggtccca ccggccctgc gggccctgcg
     1801 ggtccctggg ctcccgtcac tgtgccgggc acccatttgg cgccgttgaa cagcagcccc
     1861 tgccctgccg cgggagccgc ggaggtgagg tcgaggggga cgccctggag ctggaggacc
     1921 gccatggcgt tctgagtgcc acccacatcc ccggcgaaac ttccgctcac ctcgaaggcg
     1981 ctgcgggcct ggagggccgg aacgagctct gtatccggcg cgagggcgat gcccgccacg
     2041 gtgacatgca gcttgaggtt gggctggccc agcagcgtgg ccggaatggc aggcatgggc
     2101 gccgcgccga gggccgcgct gtagagtccg ctattcacgg agatgggctg gcttccggag
     2161 gtccagagct ccgccccgga tccatccagg atcgagaaga cgaaggcgcg cgttcccgtg
     2221 accgggagcg ccgcttccag caggcggccc tggtaggcca gcacggggcc cggcgccgcc
     2281 ggttgcgccg gggattgctg ggccgtgaga gcctggcagg ccaggacgca ggtgagggct
     2341 ggcatattcc aacggttgcg catgggagct ccggcagaaa cggaaggagg aatgaggctg
     2401 gccatcagtg ctccgtgggc acgccgctgg gatggaaccc atggcgcacc cgggtggtgt
     2461 cgttggcatc cttcgccacc agcgccggga agccctcccg cacaatggcc tggttctcga
     2521 aggttccccc ggtctggcgc cctccggcgg cctgcaccag atcatcgctg agctggccca
     2581 gcgccagggc ctgcaccacc gtgagctgga agggcatgtc gtggctgagg gttccggcct
     2641 gggcccgcag actcagtccc gtataggccg agggggccac acccggggcc acggccacag
     2701 gcagctgcag catggtggac ccggcgggca cggtaccgct ggccgccaca ccggcgggga
     2761 aacccacacc cgtgatggcg acggcggagg tgaagccgtt caggcgggac agggtgatgg
     2821 tgatgaaacc gctgccgcct gccggaatct gaaggttgcc gggtgtcacc tggaggctga
     2881 agtctgccgc ggccggcggg gtggcggtgc tcccgcctcc gccgccgcca caggccagca
     2941 ggctcgacag gagggcggta ccaagaagca gctggaatcg tcggttcatg gcagacctcg
     3001 ggagacagct cagggtgtgg tctggcggca ggccatccca ggcacgcttt caggaaaggg
     3061 cctgggccac tccgccgcct tcacttccag agcgcggtgc ggaacaggag ggtctgatcg
     3121 cccgcctcca cccaccccgc caggaggccc atggggccgg gcaccgcgaa cagtcgctgg
     3181 atgctcttcc ccgccgttcc gggaagaatc gccggcgccg tccaggcggc gccatcccac
     3241 cgggagaagc cgacgccttc atggacgccg cccgtgccgc gctggatcca cagcagggcc
     3301 ggccggcccg aggcgtcccg cgttcccacc atgacctcgg tcgtggtggg catcggcagg
     3361 atcgtccggg gtgtgccg
//
LOCUS       DASUDT010000326         3378 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1164554, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000326 DASUDT010000000
VERSION     DASUDT010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164554"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VFV26_06705"
     CDS             <1..368
                     /locus_tag="VFV26_06705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845894.1"
                     /translation="PEAPAAILSQPGRLDQLVVNLVLNARDAMPAGGILRLGVARRNR
                     ESLVELTVADTGVGIPPALQSRIFEPFFTTKAPGRGTGLGLASVQQTVRQLGGTLFLA
                     SAPDQGTTFTLRFPASVCP"
     gene            499..1638
                     /locus_tag="VFV26_06710"
     CDS             499..1638
                     /locus_tag="VFV26_06710"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4845895.1"
                     /translation="MFPQFTDDQTAIRDAARDFAQSEIAPGAAARDASGEFPKDLFQQ
                     LGEMGFLGMTVPEAYGGAGVDFLSYILALEQVAYADASVAVAMSVNNSVACAPILAFG
                     TEAQKQTYLKPLASGEALGGFMLTEPDAGSDASALKTRATKVEGGWRLNGAKAWITNG
                     GVARYFVTMARTDPDKGKKGISAFILDADQPGVIMGRPEEKMGLRSSKTVMVALEDAF
                     VPENAMLGKPGDGLKVAFGGLDGGRVGIAAQALGIAQRAMDESVAYAKARISFGKPIG
                     EHQMIQTYLAEMEARLQAARLLVYRAATLKGAGKSCTVEAATAKLFTTESAVWICDRA
                     VQIHGGYGYSREYAVERLYRDVRVTTIYEGTSEIQRMVIARELLK"
     gene            1786..3318
                     /locus_tag="VFV26_06715"
     CDS             1786..3318
                     /locus_tag="VFV26_06715"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4845896.1"
                     /translation="MMRPLIFPALLVAFSLVGQEAPKAGATQAPALKLTLQSAIETSL
                     KNNLQVQIAVETRDFTRAGLMIEQGAFDWNLTSSLSIGKTQDASRTQNFPGGPFTASE
                     TTTFARNFTLGSSKAFGWGGNLNLSYAPTYRFSKGSVNGGPETPFTSNPYDGSFSATY
                     TQSLLRNFGRDASESRLIVARKSAQAADLNFQKAIIDLVASTETLYWDVVFAQRNLEN
                     KQQTLALAQKQLKENQIRVQVGTLAPIEVTSSEASVAQREQDIIAAEAQFANAKDALI
                     RALYPSSERPASLEPADAPSIQPLDMNEAAAEKQALANRLELKTARLDLESKQALETA
                     ASNRTLPQLDAFATYNGNAASQIPSEGLTAVNKDLTKGAYPGYTVGLQFAMPIQNRAA
                     RGSQAQARANRRQSELALRDLELGITLEVRQAFRNLDASTKGVAAAEKTRIFREKDLE
                     AEQKKFENGMSTNFLVLSKQNDLDIAKSSELQSRITYAKTVTALEKALGHLLEARKLE
                     VK"
BASE COUNT          606 a         1253 c         1048 g          471 t
ORIGIN      
        1 tgccggaggc tccggccgcc atcctcagcc agcccgggcg tctggaccag ctggtggtca
       61 acctggtcct caatgcccgg gacgccatgc ccgcaggcgg catcctgcgg ctcggcgtgg
      121 cccgccggaa ccgcgagtct ctggtcgaat tgacggtggc tgatacgggt gtgggcattc
      181 ccccggcgct ccagtcccgc attttcgagc ccttcttcac caccaaggcc cccggccgtg
      241 gcacgggcct gggcctcgcc tcggtccagc agaccgtgcg gcagctggga ggcaccctgt
      301 tcctggccag cgcgccagac caggggacga ccttcaccct gaggtttccc gccagcgtct
      361 gcccgtagac ctgggagccc ccggccctgc tccgtggcga cgggaaggcg cggtctgtga
      421 tccgcggcac gccctgcccc ggggctccgg ccagggcgcc gccgggttgc taacctgaag
      481 ccattccctg gagtggccat gttccctcag ttcaccgatg accagaccgc catccgcgac
      541 gcggcccggg atttcgccca gtccgagatc gcgccgggcg ccgccgcccg cgacgccagc
      601 ggcgagttcc ccaaggacct gttccagcag ctgggcgaga tgggcttcct gggcatgacg
      661 gtgcccgagg cctacggcgg cgcgggggtg gacttcctga gctacatcct ggccctggag
      721 caggtggcct atgcggacgc ctccgtggcc gtggccatga gcgtgaacaa ctccgtggcc
      781 tgcgccccca tcctggcctt cggcaccgag gcccagaagc agacctacct gaagcccctg
      841 gccagcggcg aggccctggg cggcttcatg ctcacggagc ccgatgcggg atcggacgct
      901 tccgccctga agacccgcgc caccaaggtg gagggcggct ggcgcctgaa cggcgccaag
      961 gcctggatca ccaacggcgg cgtggcccgc tacttcgtca ccatggcccg cacggacccc
     1021 gacaagggca agaagggcat cagcgccttc atcctcgacg cggaccagcc cggcgtgatc
     1081 atgggccggc ccgaggagaa gatggggctg cgctccagca agaccgtgat ggtggccctg
     1141 gaggatgcct tcgtgcccga gaacgccatg ctgggcaagc ccggcgatgg cctgaaggtg
     1201 gccttcggcg gcctcgatgg cggccgcgtg ggcatcgccg cccaggccct gggcatcgcc
     1261 cagcgggcca tggacgagag cgtggcctac gcgaaggccc gcatttcctt cggcaagccc
     1321 atcggggaac accagatgat ccagacctac ctcgcggaga tggaggcccg gctccaggcc
     1381 gcccgcctgc tggtctaccg ggccgccacc ctgaaggggg ccggaaagag ctgcaccgtg
     1441 gaggccgcca ccgccaagct gttcaccacg gaaagcgccg tctggatctg cgaccgcgcg
     1501 gtccagatcc acggcggcta tggctactcc cgcgagtacg ccgtcgagcg gctttaccgg
     1561 gatgtccgcg tcaccaccat ctacgagggc accagcgaga tccagcgcat ggtcatcgcc
     1621 cgtgagcttc tgaagtagga cttttcaaca cacggtgaaa tgacccttgc cctcatcatg
     1681 cgagggaggc atcctgcttc cgtggaaccg tctaaaccgg ctccccggcc cgtccgtagg
     1741 cagcctgtcc ccgtggcggc tcttttcgat cctcaaggag tggtgatgat gcgtcccctg
     1801 atcttcccgg ccctgctcgt ggccttctcc ctggtgggcc aggaagctcc caaggccggc
     1861 gccacccagg ccccggctct gaagctgacc ctccagagcg ccatcgagac ctcgctgaag
     1921 aacaacctgc aggtccagat cgccgtcgaa acccgcgact tcacccgggc cgggctgatg
     1981 atcgagcagg gggccttcga ctggaacctc accagcagcc tgagcatcgg gaagacccag
     2041 gacgccagcc ggacccagaa cttcccgggc gggcccttca ccgcatccga gaccaccacc
     2101 ttcgcccgga acttcaccct gggctccagc aaggctttcg ggtggggcgg caacctgaac
     2161 ctgagctacg cgcccaccta ccgcttcagc aagggcagcg tgaacggcgg ccctgaaacg
     2221 cccttcacca gcaaccccta tgacggcagc ttctcggcca cctacaccca gagcctgctg
     2281 aggaacttcg ggcgggatgc ctccgaaagc cgcctcatcg tggcccgcaa gagcgcccag
     2341 gccgcggacc tcaacttcca gaaggccatc atcgacctgg tggccagcac ggaaacgctc
     2401 tactgggacg tggtcttcgc ccagcgcaac ctcgagaaca agcagcagac cctggccctg
     2461 gcccagaagc agctcaagga gaaccagatc cgcgtgcagg tgggcaccct ggcgcccatc
     2521 gaggtcacat cctccgaggc ctccgtggcc cagcgcgagc aggacatcat cgccgccgaa
     2581 gcccagttcg cgaatgccaa agacgccctc atccgcgccc tctacccctc ttccgagcgg
     2641 cccgccagcc tggagccggc ggacgccccc agcatccagc ccctggacat gaacgaggcc
     2701 gccgccgaga agcaggccct ggccaaccgc ctcgagctga agaccgcccg gctcgacctg
     2761 gaatccaagc aggcccttga gaccgccgcc agcaaccgga ccctgcccca gctggacgcc
     2821 ttcgccacct acaacggcaa cgccgcctcc cagatcccct cggaaggcct gacggccgtg
     2881 aacaaggacc tcaccaaggg cgcctacccg ggctacaccg tgggcctcca gttcgccatg
     2941 cccatccaga accgcgctgc caggggcagc caggcccagg cccgcgccaa ccggcgccag
     3001 agcgaactgg ccctgcgcga cctggagctg ggcatcaccc tggaagtccg ccaggccttc
     3061 cgcaacctgg atgcctccac caagggcgtg gccgccgccg agaagacccg catcttccgc
     3121 gagaaggacc tcgaagccga acagaagaag ttcgagaacg gcatgagcac caacttcctc
     3181 gtgctctcca agcagaacga cctggatatc gccaagagca gcgaactcca gtcccggatc
     3241 acctacgcca agaccgtcac ggccctggaa aaggccctgg gccacctgct ggaagcccgg
     3301 aagctggaag tcaaatagga tccgttcacg gcggaaaagc gggccccgat cggggcccgc
     3361 ttttccgccg tgaacgga
//
LOCUS       DASUDT010000327         7204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_236589, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000327 DASUDT010000000
VERSION     DASUDT010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7204
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236589"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2526)
                     /gene="topA"
                     /locus_tag="VFV26_06720"
     CDS             complement(<1..2526)
                     /gene="topA"
                     /locus_tag="VFV26_06720"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX4845897.1"
                     /translation="MTKKPTKGDASAPDPVEPAKKGLKLVIVESPSKAKTITKYLGKG
                     YKVMASVGHIRDLPRKLGVDIENGFQEEYEISPAKEKVVKELRAAAKSASELVLATDP
                     DREGEAISWHLLEAIKPPKTLPVSRVLFNEITATGIQKAMAAPTVINKKLVDAQRARR
                     VLDRLVGYKVSQVLWDKVRRGLSAGRVQSVAVRIIVDREKEILAFNPVEYWALKGRFA
                     AKLPPAFWMRLVKLGGQPVQLGNKEAKRRIADAAQAKDLKAKLEKADYQVTGLETKEK
                     KRNPAAPFTTAKLQQESAQKLKMSVSRTMQNAQRLYEGVDFGEGPVGLITYMRTDSPR
                     MAPEAVEATRDFIAQKYGKEFLPAKARVYTGKAGAQDAHEAIRPTDITRTPESLRGHL
                     EPDQFRLYALIWRRTMASQMEAARFDETVVQTEAQVGKDTATFEAKGEIERFPGWLAV
                     YRADKTEAAAEAIDDATKGPEEEDEDGALLPALRLGEGLKLEQLDADQQFTKPPARFN
                     EATLVKELEEDGIGRPSTYASIISTIQDRDYVKKHEGRFKPTDLGMTVTELLLQGFTD
                     LMDPKYTGAMEGNLDRIEEGKLTFKKAMTDFYGPFEQALAAAGKDMQNLKAGVPTGEK
                     CPKCGDKKKGGGKLLKRIGRNGLFVGCTNYGAENEKDKCDYTADLEKMEEPEDAPECP
                     LCGTTPMNLRKGQWGPFWACPNYPKCKGIVKADPKGIPVPPDEPTGEKCPNCGKGFVK
                     RHGRYGEFICCVDYPGCKTVKKEILAVPCPKCGSGLSPRKTRFGKVFYGCVAYPKCDY
                     TAWDKPVPVTCPACKNPSMGEKTRKPRGKDPIQVLICPKCQHEE"
     gene            complement(2678..3514)
                     /locus_tag="VFV26_06725"
     CDS             complement(2678..3514)
                     /locus_tag="VFV26_06725"
                     /inference="COORDINATES: protein motif:HMM:NF014533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990814 - DNA/DNA annealing activity
                     [Evidence IEA];
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX4845898.1"
                     /translation="MDLPLWALAFTVLDWPERRKAGCWAALQAGEAPALSPEQAQALA
                     RLEADLPRRRQEARDRGARLLLPGDDGVDALLAPLPYPVALWVRGTLPPAEGRRIALV
                     GSRQASARGRARTRAWAKALTEAGVAVLSGLARGIDGAAHAGALEAGPTWGVMGSGLD
                     HPYPPEHGPLMDRMVAAGGGVITPFPPEAPPLKWHFPRRNWLLAAWTDGILVTEARLK
                     SGSLVTARLALDLGKELWVCPGAPEDPSAEGPNSLLREGAARLCRSPSDLLEDLGAAR
                     GA"
     gene            3649..3840
                     /gene="rpmB"
                     /locus_tag="VFV26_06730"
     CDS             3649..3840
                     /gene="rpmB"
                     /locus_tag="VFV26_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEX4845899.1"
                     /translation="MSRQCEICGKKPQFGNNVSHSNNVTKRRWNPNIQRVRALVAGAP
                     KRLRVCTSCIQAGKVLKAC"
     gene            4042..4740
                     /gene="tsaB"
                     /locus_tag="VFV26_06735"
     CDS             4042..4740
                     /gene="tsaB"
                     /locus_tag="VFV26_06735"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEX4845900.1"
                     /translation="MLLALDTTTEILHLALIQGDRAWTRRVLPGLGRGHSERLIPTLE
                     ELMAEAGAGPRDLTGVAACLGPGGFTSLRIGVATAEGFGLTGLPTWGFSAFALRAEAL
                     RQAGVAGPVWILLDGQRGEAFHQRWAEDGPRSPAAKHPLATLSERVGGEPWWAPEAFA
                     PKVEALLPAGRMVLADEGAATLAGLAALARRVAQGLPEAPLVPFYLRETDAEVNFPHA
                     AAHLPEALRKGVAR"
     gene            4737..5162
                     /locus_tag="VFV26_06740"
     CDS             4737..5162
                     /locus_tag="VFV26_06740"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4845901.1"
                     /translation="MSGMAEAHIQRLAGNGAMPGWVARLDRTAFGSAWKAPAAHEALW
                     VLPEVAFARWACIPAAAEAELLRIAVDPAHRGQGLGRLLLEVCQRDLAAEGLSHLFLE
                     VRPSNAAAIRLYEACGWKPCGRRLRYYTDGEDAALYQRV"
     gene            complement(5311..7068)
                     /locus_tag="VFV26_06745"
     CDS             complement(5311..7068)
                     /locus_tag="VFV26_06745"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HEX4845902.1"
                     /translation="MGLHVLLVYPEMPPTYWSMRYALPFIGKKAVFPPLGLLTVAAML
                     PEGAEVSLVDLNVEPLTEAAVARADLVFISAMIVQKESMARVVRLCNALGKPVVAGGP
                     YPTSCHEQIQGVAHFVLNEAEVTLPRFLEDYARGQAQPLYTSTERPDLTRTPPPRFDL
                     VRRKDYAEMALQFSRGCPYDCEFCDIVELFGRRPRTKSPAQFLHELDLLYAEGWRGPL
                     FLVDDNFIGNRREVRALLAELIPWQQRRHHPFTLFTEASLDLAGDEALMDQMVQAGFN
                     MVFLGIETPDLCALQAAGKRQNLRGDMLAGIRKIQGKGMEVSGGFIVGFDSDGGDIFA
                     RQVQFIQEAAIPTAMVGLLTALPRTRLHRRLEAEGRLTGESGGGNNTHDLRLNFLPRM
                     DTRKLIEGYKRILAEIYRPDRYFERCLKLLKTMKPPLTSRRKLHVMELRAFVRSLAVQ
                     TFSRYGLAYWRFLVQGFLARPLLVPETVTLAVKGHHFFKMTRSLLELERFKASLQELA
                     RAFEARLQASAPQDLPQRLAELKAQRDRALGQMQARYRRLPKDFRAYADESVAAFRAT
                     LEAHLARFAGTAPAPGAAT"
BASE COUNT          943 a         2392 c         2671 g         1198 t
ORIGIN      
        1 ctcttcatgc tggcacttgg ggcagatgag gacctggatg gggtccttgc cccggggctt
       61 gcgggtcttc tcgcccatgc tggggttctt gcaggcgggg caggtgacgg ggacgggctt
      121 gtcccaggcg gtgtagtcgc acttggggta ggccacgcag ccgtagaaga ccttgccgaa
      181 gcgggtcttg cgggggctga ggccgctgcc gcacttgggg cagggcacgg ccaggatctc
      241 cttcttcacg gtcttgcagc cggggtagtc cacgcagcag atgaactcgc cgtagcggcc
      301 gtgccgcttc acgaagccct tgccgcagtt ggggcacttc tcgcccgtgg gctcgtcggg
      361 cggaacgggg atccccttgg ggtcggcctt cacgatgccc ttgcacttgg ggtagttggg
      421 gcaggcccag aaggggcccc actggccctt gcgcaggttc atgggcgtgg tgccgcagag
      481 cgggcactcc ggcgcgtcct cgggctcctc catcttctcg aggtccgccg tgtagtcgca
      541 cttgtccttt tcgttctcgg cgccgtagtt ggtgcagccc acgaagagcc cgttgcggcc
      601 gatgcgcttg agcagcttgc cgccgccctt cttcttgtcg ccgcacttgg ggcacttctc
      661 cccggtgggc acgccggcct tgaggttctg catgtccttc ccggcggcgg ccagggcctg
      721 ctcgaagggg ccgtagaagt ccgtcatggc cttcttgaag gtgagcttgc cctcttcgat
      781 gcggtcgagg ttgccctcca tggcgccggt gtacttggga tccatgagat ccgtgaagcc
      841 ctgcagcagc agctcggtga cggtcatgcc caggtccgtg ggcttgaagc ggccctcgtg
      901 cttcttcacg tagtcgcggt cctggatggt gctgatgatg ctggcgtagg tggacgggcg
      961 gccgatgccg tcctcttcca gctccttcac cagggtggct tcgttgaagc gggcgggggg
     1021 cttggtgaac tgctggtcgg cgtccagctg ctcgagcttc aggccctcgc ccagcctgag
     1081 ggcgggcagc agggcgccgt cctcgtcctc ctcctcgggg cccttggtgg cgtcgtcgat
     1141 ggcctcggcg gcggcctcgg tcttgtcggc gcggtagacc gccagccagc cggggaagcg
     1201 ctcgatctcg cccttggcct cgaaggtggc ggtgtccttg cccacctggg cctcggtctg
     1261 caccacggtc tcgtcgaagc gggcggcctc catctgcgag gccatggtgc gccgccagat
     1321 gagggcgtag agccggaact ggtcgggctc caggtgcccc cgcagcgatt cgggggtgcg
     1381 ggtgatgtcc gtggggcgga tggcctcgtg ggcgtcctgg gccccggcct tgcccgtgta
     1441 gacgcgggcc ttggcgggca ggaactcctt cccgtacttc tgggcgatga agtcgcgggt
     1501 ggcctccacg gcctctgggg ccatgcgggg cgagtcggtg cgcatgtagg tgatgaggcc
     1561 cacggggcct tcgccgaagt ccacgccttc atagagccgc tgggcgttct gcatggtgcg
     1621 gctgacgctc atcttcagct tctgggcgga ttcctgctgc agcttggcgg tggtgaaggg
     1681 ggcggcgggg ttccgcttct tctccttggt ctccaggccc gtgacctggt agtcggcctt
     1741 ctccagcttc gccttcagat ccttggcctg ggcggcgtcg gcgatgcggc gcttggcctc
     1801 cttgttgccg agctgcacgg gctggccgcc cagcttcacc aggcgcatcc agaaggcggg
     1861 cggcagcttg gcggcgaagc ggcccttcag cgcccagtac tcgacggggt tgaaggccag
     1921 gatctccttc tcgcggtcca cgatgatgcg cacggccacg ctctggacgc gcccggcgga
     1981 aaggccccgg cgcaccttgt cccagagcac ctggctgacc ttgtagccca ccaggcggtc
     2041 cagcacgcgg cgggcccgct gggcgtccac cagcttctta ttaatgaccg tgggcgcggc
     2101 catggccttc tggatgcccg ttgcagtgat ctcgttgaag aggacccggc tcacgggcag
     2161 ggtcttgggg ggcttgatgg cctccagcag gtgccagctg atggcctccc cctcgcggtc
     2221 ggggtcggtg gcgagcacga gctcggaggc ggacttggcg gcggcgcgga gctccttgac
     2281 caccttctcc ttggccgggc tgatctcgta ctcctcctgg aacccgttct cgatgtccac
     2341 gcccagcttg cggggcaggt cccggatgtg gcccacggag gccatgacct tgtagccctt
     2401 gcccaggtac ttggtgatgg tcttggcctt ggaggggctt tcgacgatca cgagcttcag
     2461 gcccttcttg gcgggttcca cggggtccgg cgcgctcgca tcgcccttgg tcggcttctt
     2521 ggtcactggg cactcccttt gggggctaaa ccacactcgc aaaacggctt ttcgtcgaaa
     2581 acagcgaggg cagcacaagg cgccgtccgg gggcttcagg aaaaacgctg tcggcccgga
     2641 acggccccta aggatggaac ctaagggcgg aggtttgtca agcgccccgg gcggcgccca
     2701 ggtcctctaa aagatcggat ggcgatcggc aaagccttgc ggcgccttct cttagcaaag
     2761 aattgggacc ttcggcagag ggatcttccg gggcgccggg acagacccag agctccttgc
     2821 ccaggtccag ggccaggcgg gccgtcacca gggagccgga cttgaggcgg gcctcggtga
     2881 ccaggatgcc gtccgtccag gccgccagca gccagttgcg gcgcgggaag tgccatttca
     2941 ggggcggggc ctcgggcgga aagggggtga tcacgccgcc cccggcggcc accatgcggt
     3001 ccatgagggg gccgtgttcg ggcgggtagg ggtggtccag gcccgagccc atgacgcccc
     3061 aggtggggcc ggcttccagg gccccggcat gggcggcgcc gtcgatgccc cgggccaggc
     3121 ccgacagcac cgccacgccc gcctccgtca gcgccttcgc ccaggcgcgg gtgcgggccc
     3181 tgccccgggc gctggcctgg cggctgccca cgagggcgat gcggcggccc tccgcggggg
     3241 gcagggtgcc ccgcacccac agggccacgg gatagggcag gggggccagc agggcgtcca
     3301 cgccgtcatc gccgggcagc agcaggcggg cgccgcggtc gcgggcctcc tggcggcgcc
     3361 ggggcaggtc ggcctccagg cgggccaggg cctgggcctg ttcgggggac agggcgggcg
     3421 cctccccggc ctgcagggcc gcccagcatc cggccttccg gcgctcgggc cagtccagca
     3481 cggtgaaggc gagggcccag aggggcaggt ccatggggct tccggggggc gtgaggctat
     3541 cctggccacg gggcgccgcg ccgcgcaagg cctttcccct tgcgttgtgc ccgtgcctgg
     3601 ctacactggt tctcttggct gttttcactt ttggctcgtg aggttcccat gtctcgtcag
     3661 tgcgaaatct gcggtaagaa gccccagttc gggaacaacg tctcccattc caacaacgtc
     3721 accaagcgcc gctggaatcc gaacatccag cgcgtccgcg ccctggtggc cggcgccccc
     3781 aagcgcctgc gcgtctgcac ctcctgcatc caggcgggca aggtcctcaa ggcctgctag
     3841 attcaggtgc gaccacgaaa aggcggcctt cggggccgcc ttttcgcgtt cgctggtccg
     3901 gagtctggtg tccggaggtt gggctcggcc gctccagatc tgcacggccc aaaggcagac
     3961 atagccgcgg cccgcagggc cgcatcagga agcagtacct ccagactcca gactccagac
     4021 tccagactgt agacttcccc catgctgctc gccctcgaca ccaccacgga gatcctgcac
     4081 ctggccttga tccaagggga ccgggcgtgg acgcggcggg tgctgccggg cctggggcgg
     4141 gggcacagcg agcggctgat ccccaccctg gaggagctca tggccgaggc cggggcgggg
     4201 ccgcgggatc tcacgggtgt ggcggcctgc ctgggccccg ggggcttcac cagcctgcgc
     4261 atcggcgtgg ccacggcgga gggcttcggc ctcacgggcc tgcccacctg gggcttctcg
     4321 gccttcgccc tgcgggccga ggcgctgcgc caggcgggcg tggccgggcc ggtgtggatc
     4381 ctcctggatg gccagcgcgg cgaggccttc caccagcgct gggccgagga cggccccagg
     4441 tcacccgccg ccaagcatcc cctggccacc ctgtccgagc gggtgggcgg cgagccctgg
     4501 tgggcgccgg aggccttcgc gcccaaggtg gaggcgctgc tgcctgcggg ccgcatggtc
     4561 ctggcggacg agggcgccgc caccctggcg ggcctggcgg ccctggcgcg gcgggtggcc
     4621 cagggccttc cggaggcgcc cctggtgccc ttctacctgc gggagaccga cgccgaggtg
     4681 aacttccccc acgccgccgc ccacctgccg gaggccctcc gcaagggggt ggcgcgatga
     4741 gcgggatggc ggaggcccac atccagcgtc tggcggggaa tggggcgatg ccgggctggg
     4801 tggcccggct ggaccgcacg gccttcgggt cggcctggaa ggcgccggcg gcccacgagg
     4861 cgctgtgggt gctgccggag gtggcctttg cccgctgggc ctgcatcccg gcggcggccg
     4921 aggccgaact cctgcgcatc gccgtggatc ccgcccaccg gggccagggc ctgggccgcc
     4981 tcctgctgga ggtctgccag cgcgacctgg ccgcagaggg gctgtcccac ctcttcctgg
     5041 aagtgcgccc cagcaacgcc gcggccatcc gcctgtacga agcctgcggc tggaagccct
     5101 gcgggcggcg gctccggtac tacaccgatg gcgaggacgc ggcgctctat cagcgggttt
     5161 aagtacgggt catcgccatc agggcattcc tccagcggtg gcttgagttc gcatgctttt
     5221 ctggaggcct tccgcggttg ccaggcgcgg aaggccccta cgcgtgatcg tccaggtggg
     5281 ccccggcgat taggaacgcc gggtccaacc ctaggtggcg gccccggggg cgggggccgt
     5341 gccggcgaag cgggcgaggt gcgcctccag ggtggcccgg aaggcggcca cggattcgtc
     5401 ggcgtaggcc cggaagtcct ttgggagccg ccggtagcgg gcctgcatct ggcccagcgc
     5461 ccggtcccgc tgggccttca gttcggcgag ccgctgcggg aggtcctggg gcgccgaggc
     5521 ctggaggcgc gcctcgaagg cccgcgccag ctcctggagc gaggccttga agcgctccag
     5581 ctccagcagg ctccgggtca tcttgaagaa gtggtggccc ttgaccgcca gggtgacggt
     5641 ctcgggcacc aggaggggcc gggcgaggaa gccctgcacg aggaagcgcc agtaggccaa
     5701 gccgtagcgc gagaaggtct ggacggcgag ggaccggacg aaggcccgga gctccatgac
     5761 gtggagtttc cggcgcgagg tgaggggcgg cttcatggtc ttcaggagct tcaggcagcg
     5821 ctcgaagtag cggtccggcc ggtagatctc ggccaggatg cgcttgtagc cctcgatgag
     5881 cttgcgggtg tccatccgcg gcaggaagtt gaggcgcagg tcgtgggtgt tgttgccccc
     5941 gccggattct cccgtgaggc ggccctcggc ctcgaggcgc cggtgcaggc gggtgcgcgg
     6001 cagggcggtg agcaggccca ccatggccgt ggggatggcg gcctcctgga tgaactggac
     6061 ctggcgcgcg aagatgtcgc cgccgtcgct gtcgaagccc acgatgaagc cgccggagac
     6121 ctccatgccc ttcccctgga tcttccggat gccggcgagc atgtcgcccc tgaggttctg
     6181 ccgcttgccc gcggcctgca gggcgcagag atccggcgtt tcgatgccca ggaacaccat
     6241 gttgaacccg gcctggacca tctggtccat cagggcctcg tcccccgcca ggtcgaggct
     6301 ggcttccgtg aacagcgtga agggatggtg ccgccgctgc tgccagggga tcagctccgc
     6361 cagcagggcc cggacctcgc gccggttccc gatgaagttg tcgtccacca ggaagagggg
     6421 gccgcgccag ccttccgcgt agaggaggtc cagctcgtgg aggaactgcg ccgggctctt
     6481 ggtgcggggc cgccggccga acagctcgac gatgtcgcag aactcgcagt cgtacgggca
     6541 gccgcgggag aactgcaggg ccatctccgc gtagtccttc cgccgcacca ggtcgaagcg
     6601 gggcgggggg gtgcgcgtga ggtcgggccg ttcggtgctg gtgtacaggg gctgggcctg
     6661 cccccgggcg tagtcctcca ggaagcgcgg cagggtgacc tccgcctcgt tcagcacgaa
     6721 gtgggccacg ccctggatct gctcatggca gctggtgggg taggggcccc cggccaccac
     6781 gggcttcccc agggcgttgc agagccggac gacccgcgcc atggactcct tctggacgat
     6841 catggcggag atgaagacga ggtcggcccg ggccacggcg gcttccgtga gcggctccac
     6901 gttcaggtcc accagggaga cctcggcgcc ctccggcagc atggcggcca cggtgagcag
     6961 gcccaggggc gggaagaccg ccttcttgcc gatgaagggc agggcgtagc gcatgctcca
     7021 gtaggtgggg ggcatttccg gatagaccaa taggacatgg agacccacct ccacctcctg
     7081 atgggtgggg gcctccgggc tttggctgcc agagcagagg cagacgacca cctccgcgca
     7141 cgcgggggcg gttgcacctt gtgtcttggg ggatcggccc acatgcttcc ggacggccga
     7201 ggac
//
LOCUS       DASUDT010000328         2207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1385222, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000328 DASUDT010000000
VERSION     DASUDT010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385222"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2207
                     /locus_tag="VFV26_06750"
     CDS             <1..>2207
                     /locus_tag="VFV26_06750"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845903.1"
                     /translation="RIDLEASQSLGLVVQSWWLEGVLEPRQPERAAQLLTPLLAAQRS
                     ITSLNLARADGHSLLFLRFGGAWSLRELEGPGPGARIRWRRLDQNGQVLSNEPWTPMA
                     YDPRTRPWYVAGAAAPAPTWTAPYAFYTTQDPGITYTLPVRDTTGLRGVAALDFLLDD
                     LTARVWAAQPTVRSRCLVVDAQGRALVLPRDPAFESPEGRRRAFLKQQVTDLLGSLAN
                     RMEDDATQGLPQRLTSGGQTVIGLSRTFSGLPGLHWKLLLSVPESDLLGPTRFRVGSM
                     LGLALLCLALAAWRILHIARRVVEPIAELSAMAEGLGQGELPPEASSDIQEIRTLDRA
                     LRQASQSLADQAQLQRQLEHSQRMETVGTLAGGIAHDVNNQLAAILGQLHLSRELLPE
                     GHPVLNRILRAEEATKRCAQTTKALLTFSRQSRPELKSLDLNEVVGETADILDRLLGG
                     RIRLALSLAPDLPPVAGDAVQLEQVLMNLAVNARDAMPAGGSLGLRTFRDDTGQVCLE
                     VRDSGTGIPEDLLPHIFEPFVTTKDLGKGTGLGLAMVFGIVKAHHGQIHAENVPGGGA
                     RFLVRLPARQEEAPSAQVKAGVPGARTSLAGRRILVVEDEALLRDMLADTLTLAMAQV
                     TAAPDGGVAWKAWQAGTFDLVLSDHRMPDCTGFELLQRIRATGSDVPFILISGQGLET
                     MEAALAKIPRVRLLPKPFELPRLLAIISEMLASRDGGSSGTLPDYNQGLSWTG"
BASE COUNT          310 a          851 c          734 g          312 t
ORIGIN      
        1 tgcgcatcga cctggaggcc tcccagtccc tgggcctggt ggtccagagc tggtggcttg
       61 agggcgtgct ggagcccagg cagccggagc gggccgccca gctgctcaca cccctgctcg
      121 cggcccagcg cagcatcacg agcctcaacc tcgcccgggc ggatggccac tccctgctgt
      181 tcctgcgctt cggcggggcc tggtccctcc gggagctgga gggaccgggc cccggcgccc
      241 ggatccgctg gcggcggctg gaccagaacg gacaggtgct gtccaacgag ccctggacgc
      301 ccatggccta cgatccccgg acccggccct ggtacgtggc tggcgccgcc gctccggccc
      361 ccacctggac cgccccctac gccttctaca ccacccagga tccgggcatc acctacaccc
      421 tgccggtgcg cgacaccacg ggcctgcggg gcgtcgccgc cctggatttc ctcctggacg
      481 acctcacggc ccgggtctgg gccgcccagc ccacggtccg cagccgctgc ctggtggtgg
      541 atgcccaggg ccgggccctg gtgctgcccc gggatccggc cttcgaatcc cccgaaggcc
      601 gccgccgggc cttcctgaaa caacaggtca cagacctcct tggatccctg gccaaccgga
      661 tggaggacga cgcgacccag gggctccccc agcgactgac gtcggggggg cagacggtga
      721 tcggcctgtc ccggaccttc tccggcctgc cgggcctcca ctggaagctg ctcctctcgg
      781 tgccggaatc ggatctcctc gggcccaccc gcttccgcgt gggcagcatg ctgggcctcg
      841 ccctgctctg cctggccctg gcggcctggc gcatcctgca catcgcccgg cgggtggtgg
      901 agcccatcgc ggaattgagc gccatggccg aaggcctggg ccagggcgag ctgccgccgg
      961 aagccagctc cgacatccag gagatccgga ccctcgaccg cgccctgcgg caggccagcc
     1021 agagcctggc ggaccaggcc cagctccagc gccagctgga gcacagccag cgcatggaga
     1081 ctgtgggcac cctggcgggc ggcatcgccc acgatgtgaa caaccagctc gccgccatcc
     1141 tgggccagct gcacctcagc cgcgaactgc tgcccgaggg ccacccggtc ctgaaccgga
     1201 tcctccgggc ggaggaggcc accaagcgct gcgcccagac caccaaggcc ctgctgacct
     1261 tcagccgcca gtcccgcccg gagctgaagt ccctggacct gaacgaggtg gtgggcgaga
     1321 ccgccgacat cctggaccgc ctcctgggcg gccgcatccg cctcgcgctt tccctcgcgc
     1381 cggatctgcc tcctgtggcc ggggacgcgg tgcagctgga gcaggtcctc atgaacctcg
     1441 ccgtgaacgc ccgggatgcc atgcccgccg gcggcagcct gggcctgcgc accttccgcg
     1501 acgacaccgg gcaggtctgc ctggaagtgc gggattcggg cacgggcatt cccgaggacc
     1561 tcctgcccca catcttcgag cccttcgtga ccaccaagga cctcggcaag ggcaccggac
     1621 tggggctggc catggtcttc ggcatcgtca aggcccacca cggccagatc cacgccgaga
     1681 acgtccccgg cggcggcgcc cggttcctcg tgcgcctccc cgcccggcaa gaggaggctc
     1741 ccagcgccca ggtgaaggcc ggcgttcccg gggctcggac cagcctggcg gggcgccgga
     1801 tcctggtggt ggaggacgag gccctgctgc gcgacatgct ggccgatacc ctgaccctgg
     1861 ccatggccca ggtcacggcc gcgcccgacg gcggtgtcgc ctggaaggcc tggcaggcgg
     1921 gcaccttcga tctggtcctg agcgaccacc gcatgcccga ctgcacgggc ttcgagctgc
     1981 tccagcggat ccgcgccacg gggtccgacg tccccttcat cctcatcagc ggccagggac
     2041 tggaaaccat ggaagcggcc ctggccaaga tccctcgggt ccgcctcctg cccaagccct
     2101 tcgagctgcc gcgcctgctg gccatcatct cggagatgct ggcctctcgg gatggcggaa
     2161 gttcgggcac gcttccggat tacaatcagg gcctatcctg gaccggt
//
LOCUS       DASUDT010000329         2727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2136498, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000329 DASUDT010000000
VERSION     DASUDT010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2727
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2136498"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..598
                     /locus_tag="VFV26_06755"
     CDS             122..598
                     /locus_tag="VFV26_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX4845904.1"
                     /translation="MKDAASDEIIARGARRSAAAFGVTDQEGRLATVAEQKGSIVIVG
                     FWSTRCEPSMKMLQEFRNFQKQAAEMGMKLVLWPVHFESWAEVNGFLRTKAAYFEGVQ
                     VKRLGLGEHGLSQLVSELDSLPTIFAIDKEGNIASFWTGYHENLLLARINGLLRER"
     gene            652..1989
                     /locus_tag="VFV26_06760"
     CDS             652..1989
                     /locus_tag="VFV26_06760"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX4845905.1"
                     /translation="MRMLSSLPDATVLSDSEAMEPYRRDESHVLGTLPLAVVRPRGPA
                     ALKELVRLAKAEGFALVPRGAGTGKAGGCLATGRSVIVDFSEWPGEITVSPQDLCLRA
                     PASALLRDVKAAAAAQGFFYPPDPNSWESCALGGTLATNAGGPNACKYGMTRHWVLAV
                     DALLEDGEIHTFGISSVKANAGPALGQLLIGSEGIFGFIVGATLRLTPMPREYTTLLL
                     PVKRWKDLLDLPGRLCGAGYLPSAFEFFDPAVLSELRAHGPEEARRLPGEAMAILEFD
                     ERGCTSEPFLEGLLDLLGPVAEGLEVASDERQRQGIWAVRRMTSAFLKERHPKKVSED
                     IVVPRSRLGEFFAGLERLGIPSVSYGHLGDGNLHVNLLAAGETEPALLERQLMDLFRL
                     ALSLGGTLSGEHGIGLAKRDAFLALSDPGQIRALRALKQALDPSGIFNPGKVI"
     gene            2330..>2727
                     /locus_tag="VFV26_06765"
     CDS             2330..>2727
                     /locus_tag="VFV26_06765"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX4845906.1"
                     /translation="MAVLHPLVLGHRGLSAKHLENSMEAFQAALAAGMAGFELDVQPT
                     RDGVCMVLHDEDLSRTAQGSGLLRHMKAAELPPLKNGEPLPRLADALELPARLINVEL
                     KGEPGWQQALATVEAAEALDRVLFSSFEPS"
BASE COUNT          426 a          965 c          895 g          441 t
ORIGIN      
        1 gagcttcggg ctcaccgccc aagatgccag gacttacaag gaactttcca aaggttcgcc
       61 ggggtgcccc cgcgtgaatg acacatccgt cggcgcccac cgtcaagctg gggcacgccc
      121 catgaaggac gccgccagcg atgagatcat cgccaggggg gcccggcgct cggctgcagc
      181 cttcggggtg actgaccagg agggccggct ggccaccgtg gccgagcaga agggctccat
      241 cgtgatcgtc ggattctgga gcacccgctg cgaaccctcc atgaagatgc tccaggagtt
      301 ccggaacttc cagaagcagg cggcagagat gggcatgaag ctcgttctgt ggcccgtgca
      361 cttcgagtcc tgggcggagg tcaacggctt cctaaggacc aaggccgcct atttcgaagg
      421 agtccaggtg aagcgcctcg gcctcggcga gcacggcctc agccagctgg tcagcgagct
      481 ggattccctg ccgaccatct tcgccatcga caaggaagga aacatcgcct ctttctggac
      541 cgggtaccac gagaacctcc tgcttgcccg catcaacggg ctgctccggg agcggtagga
      601 acctgaccag gatctgcccc ctgcggaccg gcttcccgtc agactggtgt catgcggatg
      661 ctgagcagcc tccccgacgc cacggtcctc tctgattcgg aggccatgga gccttaccgc
      721 agggacgaat cccatgtgct cgggaccctc cccctggccg tggtgcggcc ccgggggccc
      781 gcggccctga aggagctggt gcgcctggcc aaggccgaag gcttcgccct ggtgccgcgc
      841 ggcgcgggaa cgggcaaggc cgggggctgc ctcgccacgg gccggagcgt catcgtggac
      901 ttctcggagt ggcccggcga gatcacggta tcccctcagg acctctgtct cagggccccg
      961 gccagtgccc tcctgcgcga tgtgaaggcc gccgcggcgg cccaggggtt cttctaccct
     1021 ccggatccca actcctggga gagttgcgcc ctgggcggca ccctggccac caacgcggga
     1081 gggcccaatg cctgcaagta cggcatgacc cggcactggg tgctggccgt ggacgccctt
     1141 ctggaggacg gcgagatcca caccttcggc atcagcagcg tgaaggccaa cgccgggccc
     1201 gccctgggtc aattgctcat cggcagcgag ggcatcttcg gcttcatcgt gggggccacc
     1261 ctgcgcctca cgcccatgcc gcgcgaatac accacgctgc tgctgcctgt gaaacgctgg
     1321 aaggacctgc tggatcttcc cggacgcctc tgcggcgcgg gctacctgcc cagcgccttc
     1381 gagttcttcg atcccgccgt gctttcggag ctgcgcgccc acggccccga ggaggcccgg
     1441 cgcctgcccg gggaggccat ggccatcctg gagttcgacg agcggggttg cacgtccgag
     1501 cctttcctgg agggcctgct ggacctgctc gggcctgtgg ccgagggcct ggaggtcgcc
     1561 tcggacgaac gccagcgcca ggggatctgg gccgtgcggc gcatgaccag cgccttcctg
     1621 aaagagcgcc acccgaagaa ggtgagcgaa gacatcgtgg tgccccgcag ccgcctcggc
     1681 gagttcttcg cgggcctgga gcgcctgggc atccccagcg tcagctacgg ccacctgggc
     1741 gacggcaacc tgcacgtgaa cctgctggcc gcgggcgaga cggaacccgc cctgctggag
     1801 cggcagctca tggacctctt ccgcctggcc ctgtccctgg gtggcaccct cagcggcgag
     1861 cacggcatcg gcctcgccaa gcgcgacgcc ttcctcgccc tgtccgaccc cggccagatc
     1921 cgggccctcc gcgccctcaa gcaggccctg gatcccagcg gcatcttcaa ccctggcaag
     1981 gtcatctgaa gcaacaggga catagataaa ggctgaagcc acggattaca cgaattcgca
     2041 cggattggaa aagaatggcc ctggtgccgc cccctgacct ccggcatgcc ggaggccgct
     2101 ttcggcgggc ccatgcgggt tgggtaggcg cgcctctgcg atctctgcgt ccctccgcgc
     2161 cctctccgtg agtcagttgt cttaaaccga tggtccgcag gcggtccgta gcatcgatct
     2221 gtgttcatct gtgttcatcc gtggctccct tcattttttt tcaccctgga tcggccaccc
     2281 cgccgggcca gcgtggctcc gctatgctgg gtccgtcttt ggagctgcca tggccgtcct
     2341 acaccccctc gtcctcggcc accgcggcct gtcggcgaag cacctggaga acagcatgga
     2401 ggccttccag gccgccctgg cggcgggcat ggccggcttc gagctggacg tccagcccac
     2461 ccgggacggc gtgtgcatgg tgctccacga cgaggacctg tcccgcacgg cccagggctc
     2521 gggcctcctc cgccacatga aggccgccga gctgccgccc ctgaagaacg gcgagcccct
     2581 gccgcggctg gcggacgccc tggagctgcc cgccaggctc atcaacgtgg agctgaaggg
     2641 cgaacccggc tggcagcagg ccctggccac tgtggaagcc gccgaagccc tggatcgcgt
     2701 gctgttcagc agcttcgagc ccagcga
//
LOCUS       DASUDT010000330         2473 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1009970, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000330 DASUDT010000000
VERSION     DASUDT010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009970"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VFV26_06770"
     CDS             complement(<1..725)
                     /locus_tag="VFV26_06770"
                     /inference="COORDINATES: protein motif:HMM:NF018305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX4845907.1"
                     /translation="MHPLLASRARLGAYLLGWAPIAMLLAGIARSQGWSWVEAATLAL
                     PLCLLAAFLFLSAWFLCRALPLGRRVETLGSHGTAWGLAAVLMGGLWAGLAWLLARVL
                     AWIPGLEALPQRVGTALPVLTGLGILLYLASVALSYLLLAQDRAVEAERRGAELQLLA
                     QESELKALRAQLNPHFLFNSLNSLSALTAVDPARAREMCVLLSDFLRRSLGLGERRLV
                     ALREELELARAYLAIEQIRFGARL"
     gene            complement(725..1435)
                     /locus_tag="VFV26_06775"
     CDS             complement(725..1435)
                     /locus_tag="VFV26_06775"
                     /inference="COORDINATES: protein motif:HMM:NF021443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HEX4845908.1"
                     /translation="MTAPDDTQAPSPFSPKLVVGVAIIVAGLVLTLDNLGLIQAHTIF
                     KLWPLVLVAMGVAKIRQDRGSSGLGGWFLVLGGAFLLLFTLGGAHLSEALAPMLVVAV
                     GILIVVKALKQNRGVPPELARSEDFLQGTAIFGGFKRRVSTQAFKGGELTAIFGGYEV
                     DLRQAVLENGQARIDVFVLFGGGEIRVPEGWEIANRATAIAGALNDGTHHGPGSGESR
                     PRLVITGLILFGGTEVKS"
     gene            complement(1432..1857)
                     /locus_tag="VFV26_06780"
     CDS             complement(1432..1857)
                     /locus_tag="VFV26_06780"
                     /inference="COORDINATES: protein motif:HMM:NF039187.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5668 domain-containing protein"
                     /protein_id="HEX4845909.1"
                     /translation="MNAQARPPVFSAKLVFGLVVIAIGLILLVDSLHWYDAWHLLAWW
                     PLALAAFGLARLVQDGPLSLRGHLWLGFAVAGFISQFGPWGLLERWWPSFLVWGGVIV
                     TLRAVFPQPKRIRKSKDAAPSPSPAISCDAETDSTQVKP"
     gene            complement(2055..>2473)
                     /locus_tag="VFV26_06785"
     CDS             complement(2055..>2473)
                     /locus_tag="VFV26_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014524833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEX4845910.1"
                     /translation="DDDGEPSGTAGRPMLAVLEGAQATDLIAVCIRWYGGTKLGSGGL
                     VRAYTEGVQGALAEADAQGLWEEVRILRAGEIRVSAATAHLPFALLGAFPDAALLVQT
                     FEGEAAILRFECPPELCPALDHAWRERSRGGTITWD"
BASE COUNT          426 a          835 c          910 g          302 t
ORIGIN      
        1 aggcgggcgc cgaaacggat ctgctcgatg gccaggtagg cccgggccag ctccagttcc
       61 tcccgcaggg ccaccagccg gcgctcaccc aggccgaggc tgcggcggag gaaatccgac
      121 agcagcacac acatctcccg ggcccgggcc gggtccaccg ccgtgagggc cgacagggag
      181 ttcaggctgt tgaagaggaa gtggggattg agctgggccc gcagggcctt cagctcggat
      241 tcctgggcca gcagctgcag ctccgcgccc cggcgctccg cctccaccgc ccggtcctgg
      301 gccagcagca ggtagctgag ggccacggag gccaggtaga ggagaatgcc cagccccgtg
      361 agcacgggga gggccgttcc cacccgctgg ggcagggcct ccaggcccgg aatccaggcc
      421 aggacacggg ccagcagcca ggccagcccg gcccagagtc cgcccatgag gaccgccgcc
      481 aggccccagg ccgtgccgtg ggagccgagg gtctccaccc ggcggcccag gggcagggcc
      541 cggcagagga accaggcgga caggaagagg aaggccgcca gcaggcagag gggcagggcc
      601 agggtggcgg cctcgaccca gctccagccc tggctcctgg cgatgcccgc cagcagcatg
      661 gcgatggggg cccaccccag aaggtaggcc cccaaccggg cccggctggc gagcaggggg
      721 tgcatcagct cttgacctcg gtgccgccga agaggatcag gcccgtgatc accaggcggg
      781 ggcggctttc gccggaaccg ggaccgtggt gggtgccgtc gttcagggcg ccggcgatgg
      841 ccgtggcgcg gttggcgatc tcccagcctt cgggcacccg gatctcgccg ccgccgaaga
      901 gcacgaagac atcgatgcgg gcctggccgt tttcgaggac cgcctggcgg aggtccacct
      961 cgtagccgcc gaagatggcc gtcagctcgc cacccttgaa ggcctgggtg gagacccgcc
     1021 gcttgaaccc cccgaaaatg gcggtgccct ggaggaagtc ctcggaccgg gccagttccg
     1081 gcggcacgcc gcggttctgc ttcagggcct tcaccacgat gaggatgccc acggcgacca
     1141 ccagcatggg cgccagggcc tcgctgagat gcgctccgcc gagggtgaag aggaggagga
     1201 aggcgccgcc cagcaccagg aaccagccgc ccaggccgct gctgccgcgg tcctgccgga
     1261 tcttggccac gcccatggcc acgaggacca ggggccagag cttgaagatg gtgtgggcct
     1321 ggatgagccc aaggttgtcc agggtgagca cgaggcccgc tacgatgatg gccacgccca
     1381 ccaccagctt ggggctgaag gggctcgggg cctgggtgtc gtcgggggcg gtcatggttt
     1441 cacctgggtg gaatcggttt cagcatcaca ggaaatggcg ggagatggtg atggggcggc
     1501 atccttggac ttccggatgc gcttgggctg ggggaagacg gcccgcaggg tgacgatcac
     1561 gccgccccag acgaggaagc tgggccacca gcgttccagc agaccccagg ggccgaactg
     1621 agagatgaat cccgccacgg cgaagcccag ccagagatgg ccgcgcaggc tgaggggacc
     1681 gtcctgcacc aggcgggcga ggccgaaggc ggccagggcc agcggccacc aggccagcag
     1741 gtgccaggcg tcgtaccagt ggaggctgtc caccaggagg atcaggccga tggcgatgac
     1801 caccaggccg aagacgagct tggccgagaa gaccgggggg cgtgcctggg cgttcatgag
     1861 cggtgttcct ttcttcccga tccgaagggg acggcgaggg cgagcgaagg cagccacaga
     1921 agccaccacc aggatccgtc caagagccaa cccgcatgga tcatgtccgc ctccttccac
     1981 ctgaccaagc tacgggcgtc tctgcgggaa accgcgcagg gatcggtgaa tggggggcgg
     2041 gaaccggcga gcggtcagtc ccaggtgatc gtgccgcccc ggctgcgctc ccgccaggcg
     2101 tgatcgagag ccgggcagag ttccggcgga cactcgaagc gcaggatggc cgcttcgcct
     2161 tcgaaggtct gcacaagcaa ggcggcgtcg gggaaggccc ccaggagtgc gaagggcaga
     2221 tgggccgtgg ctgcggagac acggatctcc ccagcccgga ggatgcggac ttcctcccag
     2281 aggccttgcg cgtcagcctc cgccaaagcc ccctgcacgc cctcggtgta ggcccgcacc
     2341 agcccgccgc tgcccagctt ggtgccgccg taccaccgga tgcagaccgc gatgaggtcc
     2401 gtggcctggg cgccctccag caccgccagc atgggccgtc ccgcggttcc gctgggctcg
     2461 ccgtcatcat ccg
//
LOCUS       DASUDT010000331         3229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_965788, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000331 DASUDT010000000
VERSION     DASUDT010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3229
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965788"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1198)
                     /gene="ychF"
                     /locus_tag="VFV26_06790"
     CDS             complement(98..1198)
                     /gene="ychF"
                     /locus_tag="VFV26_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEX4845911.1"
                     /translation="MAVACGIVGLPNVGKSTLFNALTRAGAASANYPFCTIEPNTGVV
                     DVPDPRLAALAEIVKPQRILPAAQEFVDIAGLVRGASKGEGLGNAFLGHIRETDAIVQ
                     VVRCFEDANVTHVEGGVNPERDLSIIETELVIKDLDAVEKGLERHRKVAKTGNKESLA
                     LVAVLERVYAALNDGKWARTAGISAEDKALIKSYGLLTLKPTLFVGNIGEEDIRNPGG
                     NPHYVKLQALAAERDAPCIPICSKLEAEIQDLPEEDRPLFLEEAGLSEPGLNVLIHAS
                     YDLLGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFEKGFIRAQVIAYEDFIQCR
                     GEQGAKDAGKMRTEGKEYVVKDGDLMNFLFNV"
     gene            1327..1563
                     /locus_tag="VFV26_06795"
     CDS             1327..1563
                     /locus_tag="VFV26_06795"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HEX4845912.1"
                     /translation="MIVRAEWPGYVVDVLVRPGQEVEEDEPLLILEGTDVSRTSFYIN
                     APECGKVREILIEEGDFAYEDDDLVVIGDSDKDE"
     gene            1620..1832
                     /locus_tag="VFV26_06800"
     CDS             1620..1832
                     /locus_tag="VFV26_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HEX4845913.1"
                     /translation="MAVVRAEMAGKVLEVCVAEGDAVGEDQDLVIIESMKMQIPVGSP
                     EEGTVKKIFVVPDQFLNEGDPIVELS"
     gene            1850..2002
                     /locus_tag="VFV26_06805"
     CDS             1850..2002
                     /locus_tag="VFV26_06805"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX4845914.1"
                     /translation="MTGVEVSRIPAGDAEKMQIPVGSPEAGTVKKIFVVPDQFLNEGD
                     PIVELA"
     gene            2002..2787
                     /locus_tag="VFV26_06810"
     CDS             2002..2787
                     /locus_tag="VFV26_06810"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX4845915.1"
                     /translation="MEIRLERLQGDDAGILLLGLDRPAAKNALGRQLMGEFRQALADL
                     RVDPAIRVVVLHSLVPGVFCAGADLKERAEMSQAEAGAFVQGLRSAFTELEDLPMPVI
                     ASLEGAAFGGGLELALAADLRVAGTGAKMGLVETALAIIPGAGGTQRLPRLIGASRAK
                     ELIFTARRIDAMEAERLGLVNRLMPAGQALEGALALAREILPNGPVALRMAKQAVSRG
                     LDLDRDAGLAFEQACYAQVIPTKDRLEGLAAFRDKRKPQYRGE"
     gene            2787..>3229
                     /locus_tag="VFV26_06815"
     CDS             2787..>3229
                     /locus_tag="VFV26_06815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX4845916.1"
                     /translation="MSGHHHHGPSTTGRLAWSAGIFFTSFVLQGLGGLWTGSIGLVSD
                     SLENLNDVLVNSLGILSLWLANRRAPDDRWTFGWHRLEVFNSLLGVGFLLLLAGAVGW
                     EALNRFRHPVPIQTGWVLVFSGIGLVLNIAATLVLVPRDRSLLER"
BASE COUNT          512 a         1050 c         1123 g          544 t
ORIGIN      
        1 catcccccca cccatcggct ggaccactgg gtggattgag ttcagacgtc gcgccctatg
       61 cggggcccca caggaagcca atcacgtcta atggcggcta gacattgaag aggaagttca
      121 tgagatcacc atccttgacc acgtattcct tgccttcggt gcgcatcttc cccgcgtcct
      181 tggccccctg ctcgccccgg cactggatga aatcctcata ggcgatgacc tgggcccgga
      241 tgaagccctt ctcgaaatcc gtatggatga cgcccgcggc ctggggggcc gtgtcgccct
      301 tgtggatggt ccaggcccgg acctccttca cgccggcggt gaagtaggtc tggaggccca
      361 gcagatcgta gctggcgtgg atgagcacgt tcaggcccgg ttcggagagg cccgcctctt
      421 ccaggaagag ggggcggtcc tcctcgggca ggtcctggat ctcggcttcg agcttggagc
      481 agatggggat gcagggggcg tcgcgctcgg cggccagggc ctggagcttc acgtagtgcg
      541 ggttcccccc gggattccgg atgtcctcct ccccgatgtt gcccacgaag agggtgggct
      601 tgagggtcag caggccgtag gacttgatga gggccttgtc ctcggcggag atcccggcgg
      661 tccgggccca cttgccgtca ttgagcgcgg cgtagacccg ctccagcacg gccaccaggg
      721 ccagggactc cttgttcccg gtcttggcca ccttgcggtg gcgttccagg cccttttcca
      781 cggcgtccag gtccttgatg accagctccg tctcgatgat gctcaggtcc cgctcggggt
      841 tcaccccgcc ctccacatgg gtgacattgg catcctcaaa gcagcgcacc acctggacga
      901 tggcatcggt ctcccggatg tggccgagga aggcgttgcc caggccctcg cccttgctgg
      961 ccccccgcac caggcccgcg atgtccacga actcctgggc ggccggaagg atgcgctggg
     1021 gcttcacgat ctccgccagg gccgccagcc ggggatccgg cacgtccacc acgcccgtat
     1081 tgggctcgat ggtgcagaag gggtagttgg ccgaagccgc gcccgcacgg gtgagggcgt
     1141 tgaaaagggt ggactttccc acgttgggga gacccacgat gccacaggcg acagccattc
     1201 caacctccaa gccttccagt atcccagaga ggagatgtga cgaaaagaaa ggcttccggg
     1261 tcttgcgcgg ggggccgtgg cgccatactc tcccggccaa ggtctcggga tggcggagga
     1321 ggcagcatga tcgtgcgggc ggaatggccg ggctacgtgg tggacgtcct cgtgcgcccc
     1381 ggccaggaag tggaggagga cgagcccttg ttgatccttg agggcacgga cgtttcccgc
     1441 acctccttct acatcaacgc ccccgaatgc gggaaggtcc gcgagatcct catcgaagag
     1501 ggcgatttcg cctatgagga cgacgatctg gtggtgatcg gcgactccga caaggacgaa
     1561 tagcgcggcc agcccggggg accgctacac tggggccatc gtcctcatga ggtgaccgaa
     1621 tggccgtggt gcgagccgaa atggcgggga aagtcctgga agtctgtgtc gccgagggcg
     1681 acgcggtcgg ggaggaccag gacctggtga tcatcgagtc catgaagatg cagatccccg
     1741 tgggcagtcc ggaggaggga acggtcaaga agatcttcgt ggtccccgac cagttcctga
     1801 acgaagggga ccccatcgtc gaactttcgt gaggtcgctc gtgcccataa tgaccggtgt
     1861 tgaagtctcg cgtatccccg caggggatgc cgagaagatg cagatccccg tgggcagtcc
     1921 ggaggcggga acggtcaaga agatcttcgt ggtccccgac cagttcctga acgaagggga
     1981 ccccatcgtc gagctggcct gatggagatc cggctggagc gcctccaggg agacgatgcg
     2041 ggcatcctcc tgctgggcct ggaccgcccc gccgcgaaga acgccctggg ccgccagctc
     2101 atgggcgaat tccgccaggc cctggcggac ctccgcgtcg acccggccat ccgcgtggtg
     2161 gttctgcata gcctcgtgcc gggggtgttc tgcgccgggg ccgatctgaa agagcgggcg
     2221 gagatgtccc aggccgaggc cggggccttc gtccagggcc tccggagcgc cttcacggag
     2281 ctggaggacc tgcccatgcc cgtcatcgcc tccctggagg gcgcggcctt cggcggcggg
     2341 ctggagctgg ccctggcggc ggatctccgg gtggccggga ccggcgcgaa gatgggcctg
     2401 gtggaaaccg ccctcgccat catcccgggc gccggaggca cccagcgcct gccgcggctc
     2461 atcggggcct cccgggccaa ggaactgatc ttcacggccc ggcgcatcga tgccatggag
     2521 gcggagcgac tgggcctggt gaatcggctc atgcccgccg ggcaggccct ggagggcgcg
     2581 ctcgccctgg cccgggagat cctccccaac gggcctgtgg ccctgcgcat ggccaagcag
     2641 gccgtgagcc gggggctgga tttggaccgg gacgccggcc tcgccttcga gcaggcctgc
     2701 tacgcccagg tgattcccac gaaggaccgg ctggaaggtc tggccgcctt ccgggacaag
     2761 cggaaacccc agtaccgggg cgaatgatgt ccggccacca ccatcacggt cccagcacca
     2821 ccggccgcct ggcctggagc gccgggatct tcttcaccag cttcgtcctc cagggcctgg
     2881 gcggcctctg gacgggctcc atcggcctgg tcagcgacag cctggagaac ctgaacgacg
     2941 tcctggtgaa cagcctgggc atcctgagcc tgtggttggc caaccggcgg gctccggacg
     3001 accgctggac cttcgggtgg catcgcctgg aggtgttcaa cagcctcctg ggggtgggct
     3061 tcctcctgct gctggccggg gccgtggggt gggaggcgct gaaccgcttc cgccatcccg
     3121 tgcccatcca gacgggttgg gtgctggtgt tctcgggcat cgggctggtc ctcaacatcg
     3181 ccgccacact ggtgctggtg ccccgggacc gcagcctgct ggagcgcga
//
LOCUS       DASUDT010000332         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_413604, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000332 DASUDT010000000
VERSION     DASUDT010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413604"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VFV26_06820"
     CDS             <1..379
                     /locus_tag="VFV26_06820"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX4845917.1"
                     /translation="LVETILELPQNLGLKVKGPVGLGPDGFIATPPPPTMAETAAAYR
                     AVSDSLLDHIGSWSNTELGRTFALYGETWTGAFALYVLVSHQTHHRAQMTVLMRQAGL
                     HVPSIYGPTKEGWAGFGLEAPKV"
     gene            complement(385..972)
                     /locus_tag="VFV26_06825"
     CDS             complement(385..972)
                     /locus_tag="VFV26_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845918.1"
                     /translation="MTTRAARFRPPDSSRAAARLFLAGLAALSFAPTPLRAQDLRAGV
                     GVFLFADRGLDFQLAYRPAHSHWQFGYRHVQWMDTFNDPFTGRALTETTESKSGPLVT
                     YLFRPESPGSWYLGGAVYRWSKREKSLITGEVGRDATTAPFIGGGYTRTLGRHAYFNL
                     GLYLSPGAQVSTRTSVSSEDDSGGFDIQIQMGVRF"
     gene            1178..>2147
                     /locus_tag="VFV26_06830"
     CDS             1178..>2147
                     /locus_tag="VFV26_06830"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4845919.1"
                     /translation="MTEQVWWSSYPEGVGREAQPFPVENLGQLVRQAAQRYGDRKAET
                     LVLPNGMQASLSFREIDRLSDDFASYLQHGLRLQPGARIAILLPNALAYPICAFGALK
                     AGCVVVNTNPLYTPRELELQLLDSGAEVLVVLDHFGDKVASVVPRTQVKTIVVTGIAD
                     FFPLVSRTLIQAKLRLSGLIPRLNLPFTRLPGALRQGALYRAKEHLLPDAVKHPEPTR
                     GSLALLQYTGGTTGTSKGAMLSHGNLLANLEQIAEITKIYLTYGEETVLTVLPMYHVI
                     AFTINLLFGFHTGSHSILVPNPRPLKNLHAAFKNHEITWMTAVNTLL"
BASE COUNT          372 a          735 c          694 g          346 t
ORIGIN      
        1 cctggtggag accatcctgg aactgcccca gaacctgggc ctcaaggtga agggccccgt
       61 gggtctcggc cccgacggct tcatcgccac cccgccgccg cccaccatgg cggagaccgc
      121 tgccgcctac cgcgccgtga gcgattcgct gctggatcat atcggcagct ggagcaatac
      181 ggaactgggc cgcaccttcg ccctctacgg cgaaacctgg accggggcct tcgcgctcta
      241 tgtgctggtc agccaccaga cccaccaccg cgcccagatg acggtcctca tgcgccaggc
      301 gggcctccac gtgcccagca tctacggtcc caccaaggag ggctgggccg gattcgggct
      361 ggaggcgccg aaggtctgat cctcctagaa ccggaccccc atctggatct ggatgtcgaa
      421 gcccccgctg tcgtcttctg aactgacgct ggtccgggtg gacacctggg caccggggct
      481 gaggtagagg ccgagattga agtaggcatg ccggcccagc gtgcgggtgt agccgccgcc
      541 gatgaagggc gccgtggtgg cgtcgcggcc gacctccccg gtgatcaggg atttctcccg
      601 cttggaccaa cggtagacgg cacccccgag gtaccagctg cccggagatt cggggcggaa
      661 gaggtaggtg acgaggggac cgctcttcga ttccgtggtt tccgtcagtg cgcggccggt
      721 gaagggatcg ttgaacgtat ccatccactg gacgtgccga tagccgaact gccagtggct
      781 gtgggccggg cggtaggcca gctggaagtc caggccgcgg tcagcgaaga ggaacacgcc
      841 gactcccgcc cgcaggtcct gcgcccggag cggggtcggc gcgaacgaca gcgcggccaa
      901 tcctgcgagg aacagccggg ccgcggcccg gctgctatcg ggtggacgga aacgtgcagc
      961 acgcgtcgtc atggcatcac cggatgggtt gtcccaggga tagtcccagc ggccggaggt
     1021 gtcaacgcaa aagggtgctc accttcgggc ggtgctgatc gatccgcttc gctcagggga
     1081 ccttggcggc taaaatgatg aacttctgcg gcttatttcc gcggttggac ggatgagcgc
     1141 agcgcggtgg ggccagagcc ggaaggtgga tttcgtgatg acagaacagg tgtggtggtc
     1201 cagctatccg gagggcgtgg ggcgcgaagc ccagcccttt cccgtcgaga acctgggcca
     1261 gctggtgcgg caggcggctc agcggtatgg agaccggaag gcggaaaccc tggtccttcc
     1321 caacggcatg caggcctccc tcagcttcag ggaaatcgac cgcctctccg acgacttcgc
     1381 gtcctacctg cagcacggcc tccggctgca gcccggggcc cggatcgcca tcctgctgcc
     1441 caatgccctg gcctatccca tctgcgcctt cggagccctc aaggccgggt gcgtggtggt
     1501 caacaccaat cccctctaca cgccccggga gctggagctc caactcctgg acagcggcgc
     1561 cgaggtgctg gtggtgctcg accacttcgg cgacaaggtg gcctccgtgg ttcccaggac
     1621 tcaggtgaag accatcgtgg tcacgggcat tgcggatttc ttcccgcttg tctcccggac
     1681 cctcatccag gccaagctgc ggctttccgg cctgatcccc cgcctgaacc tgcccttcac
     1741 gcggctcccg ggagccctcc gccagggcgc cctgtaccgg gcgaaggaac accttctgcc
     1801 cgacgcggtg aaacaccccg aacccacccg cggcagcctc gccctgctcc agtacacggg
     1861 cggcaccacc ggcaccagca agggcgccat gctgagccac ggcaacctgc tggccaacct
     1921 ggagcagatc gccgagatca cgaagatcta cctcacctac ggggaggaga cggtgctgac
     1981 ggtcctgccg atgtaccacg tgatcgcctt caccatcaac ctgctcttcg gcttccacac
     2041 cggcagccac agcatcctgg tgcccaatcc gcggcccctc aagaacctcc atgcggcctt
     2101 caagaaccac gagatcacct ggatgacggc ggtgaacacg ctgctga
//
LOCUS       DASUDT010000333         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_458039, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000333 DASUDT010000000
VERSION     DASUDT010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458039"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VFV26_06835"
     CDS             <1..753
                     /locus_tag="VFV26_06835"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX4845920.1"
                     /translation="PVIEDAAQAMGARYKGTKIGGDPRSIMSVYSFHPNKNMTTGEGG
                     AIAFFNDEYESRIKRLRFHGIDRDAWKRFAKEGSPHTEVFEPGRKANFMDLQAAMGLH
                     QIGKLDGFNARRGVLFHRYLELMEDLDEVMLPWPGDADHGHCFHLFVLRIHPGKVGLD
                     RDAFVAALKEENIGTGIHYRPAHVHPWYRDFYAAHPQHLPKDGLPHSEWSGERLLSLP
                     LWPGLTEADQDQTVAAIRQVIARAKAATRSTM"
     gene            813..>2150
                     /locus_tag="VFV26_06840"
     CDS             813..>2150
                     /locus_tag="VFV26_06840"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845921.1"
                     /translation="MANFNLIVILLSISLQIAAAGMALRINRIAGRPLAWVLMSSALV
                     LMAGRRLYVLVELYREGFPQHLLPNEIAGFLVSALMFWGILLIKDLFQSKADQAAKLE
                     EARKASRALADKLTAVMAAAPVPLWIAEDPACRTIRGNPAGADLLRMPVQANHSASAP
                     RGEQPGHFRLVQDGRTLAPEQMPMQRAALRGEDIRGEAVDLVFGDGQIRHLMGYATPL
                     RETDGRIHGAVCCMVDVTAIRQVEAALAKAQKMESIGLLAGGIAHDFNNIFQAMVANI
                     EMAQASAPVEARCRVYLDRLRAGLDRASRLSRDILHVSGGDLRRPEPADLTPLVAEAL
                     DRTGVAAIRQLGTGLSRVMVDPLLIGRVVEGLVTNALEASSAAGAIRVQTFMRQVTAE
                     DLAKGHWPAPVEPGPYAVFEVSDQGHGIDAAALPKIFDPFFSTRDLGRGLGLPA"
BASE COUNT          344 a          767 c          716 g          323 t
ORIGIN      
        1 ccggtcatcg aggacgcggc ccaggccatg ggcgcccgct acaagggcac gaagatcggt
       61 ggcgatccgc gctcgatcat gagcgtctac agcttccacc ccaacaagaa catgaccacg
      121 ggcgagggcg gggccatcgc cttcttcaat gacgagtacg aaagccgcat caagcgcctg
      181 cgcttccacg gcatcgaccg ggatgcctgg aagcgcttcg ccaaggaggg cagcccccac
      241 acggaggtct tcgagcccgg ccgcaaggcg aacttcatgg acctccaggc ggccatgggc
      301 ctgcaccaga tcggcaagct ggacggcttc aacgcccggc gcggcgtgct gttccaccgc
      361 tacctggagc tgatggagga cctggacgag gtcatgctgc cctggcccgg cgacgccgac
      421 cacggccact gcttccacct cttcgtgctg cgcatccacc ccgggaaggt gggcctggac
      481 cgcgacgcct tcgtggcggc gctcaaggag gagaacatcg gcacgggcat ccactaccgc
      541 ccggcccacg tccacccctg gtaccgggac ttctacgcgg cccaccccca gcacctgccc
      601 aaggatggcc tgccccacag cgaatggagc ggcgagcgcc tcctgagcct gcccctgtgg
      661 cccggtctca ccgaggccga ccaggaccag accgtggccg ccatccgcca ggtgatcgcc
      721 cgagcgaaag ccgcgacccg cagcacgatg taaccggaat ttgccaagct atggccattg
      781 gtcgatagta agagtcggga atcccagact tggtggccaa cttcaacctc atcgtcatcc
      841 tgctttccat ctcgcttcag atcgcagcgg cgggcatggc cctgcggatc aaccggatcg
      901 ccgggcggcc cctggcctgg gtgctgatgt cctcggctct cgtgctgatg gcgggccgcc
      961 ggctctacgt gctggtggag ctctaccggg agggtttccc ccagcatctg ctgcccaacg
     1021 agatcgcagg cttcctggtg tccgccctca tgttctgggg catcctcctg atcaaggacc
     1081 tgttccaatc caaggccgac caggccgcca agctggagga ggcgcggaag gcgtcccggg
     1141 cgctggccga caagctcacc gcggtcatgg ccgcggctcc cgtgcccctc tggatcgcgg
     1201 aggaccccgc ctgccgcacc atccggggca atccggcggg cgccgacctt ctgcggatgc
     1261 cggtccaggc caaccattca gcttcggcgc ccaggggaga acagccgggc catttccggc
     1321 tggtgcagga tggccggacc ctcgcaccgg agcagatgcc catgcagcgg gcggccctcc
     1381 ggggagagga catccggggc gaggctgtgg atctggtgtt cggcgatggc cagatccgcc
     1441 acctcatggg ctacgccacg ccgctgcggg agacggacgg ccggatccac ggggcggtct
     1501 gctgcatggt ggacgtgacc gccatccggc aggtggaagc ggccttggcc aaggcccaga
     1561 agatggaaag catcggcctc ctggccggag ggatcgccca cgacttcaac aacatcttcc
     1621 aggccatggt ggccaacatc gagatggccc aggccagcgc cccggtggag gcccgctgcc
     1681 gcgtctacct ggaccgcctc cgggcggggc tggaccgcgc ctcccgcctc agccgggaca
     1741 tcctccatgt ctccggcggt gacctgcggc gtcccgaacc ggcggacctg actcccctcg
     1801 tggcggaggc tctggaccgc acgggcgtgg cggcgatccg gcagctcggc acgggtctgt
     1861 cccgggtgat ggtggatccc ctgctgatcg ggcgggtggt ggaggggctt gtgaccaacg
     1921 ccctggaggc cagttcggcc gcgggcgcca tccgagtgca gaccttcatg cgccaggtga
     1981 ccgcggagga tctggccaag ggccactggc cggccccggt ggaacccggc ccctacgcgg
     2041 tcttcgaggt atccgaccag ggccacggca tcgacgcggc cgccctgccg aagatcttcg
     2101 accccttctt ctccacccgg gacctgggcc ggggcctggg ccttcctgcg
//
LOCUS       DASUDT010000334         5470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_634553, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000334 DASUDT010000000
VERSION     DASUDT010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_634553"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VFV26_06845"
     CDS             complement(<1..204)
                     /locus_tag="VFV26_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845922.1"
                     /translation="MADSSWDNGGHGVPVKAGLPLWGKIALGCGVTFLVIMVTCIGLG
                     AYVVNKAKKDPEAFEKRAMAFAVD"
     gene            complement(214..1545)
                     /locus_tag="VFV26_06850"
     CDS             complement(214..1545)
                     /locus_tag="VFV26_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX4845923.1"
                     /translation="MVPPSSKKVFVLDTNVLLHDPNSILHFQEHDVVLPIVVIEEIDH
                     FKKDQTEIGRNARTVSRMLDKLRAAGSLSRGVPLEGGGSLKVDVENHPLDIGILREDK
                     HKADNQILACAKQHLATRKEKVVLVTKDTNLRIKADAIGVQAEDYTTDRVEMDELYTG
                     HKAWEVDPAKVDLLYDGGLQPDPDLHLEPNQFLTLVDQTNPSHTALARFMAGEGLLRP
                     LRRMDAYPWGIKPRNREQQFAMELLLDPAVQVVTLLGKAGTGKTLLAIAAGLQQVVDD
                     EAYDKILVSRPVMPMGRDLGYLPGDISEKLRPYMQPIYDNLEFIVGANTEARKRTTMT
                     AGQLEEAGYLSVEPLTYIRGRSIPKQYLVVDEAQNLTPHEVKTILTRAGEGTKVIFTG
                     DPHQIDNPYVDASTNGLSFLAEHFKHLDVSGHVTLMKGERSKLAELASNLL"
     gene            1655..3769
                     /locus_tag="VFV26_06855"
     CDS             1655..3769
                     /locus_tag="VFV26_06855"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4845924.1"
                     /translation="MRFLPMALAVTAVLSAQSPLSYPATRKGDVVDDFFGTKVADPYR
                     WLEDDNSAETKAWVEAQNKVSFAYLAQIPERTKIQERITKLWDFEKYSAPFKRGKRYF
                     YSYNTGLQNQSVLFVTEDPKAKGRVLLDPNTLSKDGTVALSGMSFTEDGRFMAYSVSV
                     AGSDWQTWKVRDVATGQDLADEIRWSKASGASWLKDGSGFFYSRYEAPKEGGALTGVN
                     NNHMLCFHKLGTPQAEDVLIYQRPDQPEWYLGGSVTDDGRWLVISCGKGTNPETSLFL
                     KDLSKPGSPVEPFLDRMDASYGVVDNEGDRFFVVTNQGAPRNRLVAIRKGQTDPAAWA
                     ELIPQAKGKDVLESVSLVGGRFVATWMRDAHSAIEFFDLKGRKTGTLALPALGTAGGF
                     GGRREDTETFYTFGSFAYPGTVYRLDLKTGKSTVFRTPKVAFKPADYAVKQVFYPSKD
                     GTKIPMFLVHKKGLKLDGQNPTLLYGYGGFNVSLTPGFSVSRMVWLEMGGVYAMPNLR
                     GGGEYGLEWYDAGRKDKKQNVFDDFIAAAEWLIANKYTSTPKLAINGGSNGGLLVGAC
                     LTQRPDLFGAAVPEVGVMDMLRFHKFTLGWGWKSDYGSSETKEGFDTLMKYSPLHTIK
                     PGANYPPTLVTTGDHDDRVVPAHSHKFTATLQAAQGGPAPILTRIETSAGHGAGKPTA
                     KVIAERADVFAFLVKNLGMKAR"
     gene            3841..>5470
                     /locus_tag="VFV26_06860"
     CDS             3841..>5470
                     /locus_tag="VFV26_06860"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4845925.1"
                     /translation="MPLLLSRTCLLALAATALAAQMPLTYPDTRKGDAVDNYHGTKVA
                     DPYRWLEDDRSTETAAWVEAQNKVTRAYLDQIPERKAIEARLTKLWNYEKFGAPSKHG
                     KYYVYSYNSGLQNQAVVYLTERLEDKGRVLFDPNTLSKDGTVSLGGMRFSEDGAFVAY
                     RLSKGGSDVSTWKVRNVASGVDLPDSFPAGRMGVNGWAKDGSGFYYTDYPKVEAGKAL
                     TAVYKNQKLFFHKLGDPVEKDVVVYERPDQPDWGFGAGVTDDGRWLVISQSQGTERKN
                     RVFLKDLRQAGSPVVPLFGQYDGSYSILGNDGDTFYVHTDSGAPRHRIVAVDLKDSSP
                     KAWKDLIPEGKGRDVLAGADLFGNTLVVTWKVDALNTVKLYDLKGRFLKEIKPEGLGN
                     LGGFGGRREDTETFYTFTSYNQPPTLYRYDLKTGVSTVFRQPKVDIRPTDYEVKEVFY
                     PSKDGTLVPMFLAHKKGLKLDGTNPTLLYAYGGFNIAQSPGYSPVSQTWMEMGGVYAV
                     ACLRGGSEYGKTWWEAGKRETKQNVFDDFIAAAEW"
BASE COUNT          961 a         1819 c         1772 g          918 t
ORIGIN      
        1 atccacggcg aaggccatgg cccgcttctc gaaggcctcg ggatccttct tcgccttgtt
       61 gaccacatag gcgccaagcc cgatgcaggt gaccatgatc accaggaagg tgacgccgca
      121 gcccagggcg atcttgcccc agagcggcag acccgccttg accggcacgc cgtgcccgcc
      181 gttgtcccag gatgaatccg ccatggaagg atcctacaga agattgctcg ccagctccgc
      241 cagcttgctg cgctcgccct tcatgagggt gacgtggccg gagacgtcga ggtgcttgaa
      301 gtgttcggcc aggaagctga ggccgttggt gctggcgtcc acgtaggggt tgtcgatctg
      361 gtggggatcg ccggtgaaga tcaccttggt gccctccccc gcgcgggtga ggatcgtctt
      421 gacctcgtgg ggcgtgaggt tctgggcctc gtccaccacc aggtactgct tggggatgct
      481 gcggccccgg atgtaggtga ggggttccac actcaggtag cccgcctcct ccagctggcc
      541 cgcggtcatg gtggtgcgct tccgggcctc ggtgttggcg cccacgatga attccaggtt
      601 gtcgtagatg ggctgcatgt aggggcgcag cttctcgctg atgtctcccg gcaggtagcc
      661 caggtcgcgg cccatgggca tgacgggacg gctcacgagg atcttgtcgt aggcttcgtc
      721 gtccaccacc tgctgcaggc ccgcggcgat ggccaggagg gtcttgccgg tgcccgcctt
      781 gcccagcagg gtgaccacct ggaccgcggg atccagcagc agttccatgg cgaactgctg
      841 ttcgcggttg cggggcttga tgccccaggg gtaggcatcc atgcgccgca ggggccgcag
      901 gagcccctcc ccggccatga agcgggccag ggccgtgtgg ctgggattgg tctgatccac
      961 caacgtgagg aactggttgg gttccaggtg caggtccgga tccggctgga ggccgccgtc
     1021 gtagagcagg tccaccttcg cgggatccac ctcccaggcc ttgtggccgg tgtagagctc
     1081 gtccatctcc acgcggtccg tggtgtagtc ctcggcctgc acaccgatgg catcggcctt
     1141 gatgcgcagg ttcgtgtctt tggtgaccag gaccaccttc tccttgcggg tggcgaggtg
     1201 ctgcttggcg caggccagaa tctggttgtc ggccttgtgc ttgtcctccc gcaggatgcc
     1261 gatgtccagg gggtggttct ccacatccac cttgagggag ccgccgcctt ccaggggcac
     1321 gccgcggctg aggctgccgg cggcccggag cttgtccagc atgcgggaca cggtgcgggc
     1381 gttgcggccg atctcggtct ggtccttctt gaagtggtcg atctcttcga tgacgacgat
     1441 gggcagcacc acatcgtgtt cctggaagtg caggatggaa ttcggatcgt gcaggaggac
     1501 gttcgtatcc aggacgaaga ccttcttgct ggatggcggg accaagagac ctccaggttt
     1561 ggccggagcc taccaccaag cggcccgcct tgcacggctg ggattgcgct tcccgatggt
     1621 gggagaatgg ccaccccttc ggaggtcata ttccatgagg ttccttccca tggcccttgc
     1681 cgtcaccgcc gtcctttccg cccagtcccc gctgtcctac ccggccacgc gcaaggggga
     1741 tgtggtggat gatttcttcg gcaccaaggt ggccgatccc taccgctggc tggaggacga
     1801 caacagcgcc gaaaccaagg cctgggtgga ggcccagaac aaggtcagct tcgcctacct
     1861 ggcgcagatc cccgagcgga cgaagatcca ggaacgcatc accaagctct gggatttcga
     1921 gaagtacagc gcccccttca agcgtggcaa gcgctacttc tactcctaca acaccgggct
     1981 ccagaaccag tcggtgctgt tcgtgacgga ggatcccaag gccaagggcc gcgtgctgct
     2041 ggatcccaac acgctgagca aggatggcac cgtggccctc agcggcatga gcttcaccga
     2101 ggacgggcgt ttcatggcct attccgtgtc cgtggccggg tcggactggc agacctggaa
     2161 ggtccgcgat gtggccacgg gccaggatct ggcggacgag atccgctggt ccaaggccag
     2221 cggcgcctcg tggctgaagg atggcagcgg cttcttctac agccgctacg aggcccccaa
     2281 ggagggcggg gcgctcacgg gcgtgaacaa caaccacatg ctctgcttcc acaagctggg
     2341 cacgccccag gccgaggacg tcctcatcta ccagcgcccc gaccagcccg agtggtacct
     2401 gggcgggtct gtcaccgatg acggccgctg gctggtgatc agctgcggca agggcaccaa
     2461 ccccgagacc agcctcttcc tcaaggacct gagcaagccc ggcagtcccg tggagccctt
     2521 cctggaccgc atggacgcca gctacggcgt ggtggacaac gaaggcgacc gcttcttcgt
     2581 tgtcaccaac cagggcgctc cgcggaatcg cctggtggcc atccgcaaag gacagacgga
     2641 tccggcggcc tgggccgagc tcatccccca ggccaagggc aaggacgtgc tggaatcggt
     2701 gtcgctggtg ggcggccgct tcgtggccac ctggatgcgg gacgcccact ccgccatcga
     2761 gttcttcgac ctcaagggca ggaagaccgg caccctcgcg ctgcctgccc tgggcaccgc
     2821 gggcggcttc ggcggccgcc gcgaggacac cgagaccttc tacaccttcg gcagcttcgc
     2881 ctaccccggc accgtctacc ggctggatct gaagacgggc aagagcaccg tcttccgcac
     2941 gcccaaggtg gccttcaagc ccgcggacta cgcggtgaag caggtcttct accccagcaa
     3001 ggacggcacg aagatcccca tgttcctggt gcacaagaag ggcctcaagc tggatggcca
     3061 gaacccgacc ctgctgtacg gctacggggg cttcaacgta tccctgacgc cgggcttctc
     3121 cgtgtcccgc atggtctggc tggagatggg cggcgtctac gccatgccca acctgcgcgg
     3181 cggcggcgaa tacggcctgg agtggtacga cgcgggccgg aaggacaaga agcagaacgt
     3241 cttcgacgac ttcatcgccg cggcggaatg gctcatcgcg aacaagtaca cctccacgcc
     3301 gaagctggcc atcaacggcg gcagcaacgg cggcctgctg gtgggcgcct gcctcaccca
     3361 gcggccggac ctcttcggcg ccgcggtgcc cgaagtgggc gtcatggaca tgctgcgctt
     3421 ccacaagttc accctgggct ggggctggaa gagcgactac ggcagcagcg agacgaagga
     3481 gggcttcgac accctcatga agtactcgcc tctccacacc atcaaacccg gggcgaatta
     3541 ccctccgacc ctcgtgacca ccggcgacca cgacgaccgc gtggtgcccg cccacagcca
     3601 caagttcacg gccaccctcc aggccgccca gggcggcccg gcccccatcc tcacccgcat
     3661 cgaaacgagt gcgggccacg gcgccggcaa gcccaccgcc aaggtcatcg ccgaacgggc
     3721 ggatgtcttc gccttcctgg tgaagaacct gggcatgaag gcccgctgac attttcagtt
     3781 gagacattgt gttgcgaggt attctgaagg acattcccgt gcccttcagg aggcctttcc
     3841 atgccgctgc tcctctcccg aacctgcctg ctggccctgg cggccacggc cctggcggcc
     3901 cagatgccgc tcacgtaccc ggacacccgc aagggcgacg cggtggacaa ctaccatggc
     3961 accaaggtgg ccgatcccta tcgctggctg gaggatgacc gctccaccga aaccgccgcc
     4021 tgggtagagg cccagaacaa ggtgacgcgg gcctacctcg atcagatccc cgagcggaag
     4081 gccatcgagg cgcgcctgac gaagctctgg aactacgaga agttcggcgc ccccagcaag
     4141 cacgggaagt actacgtgta ttcctacaac tccggcctcc agaaccaggc ggtggtctac
     4201 ctgacggagc ggctggagga caagggccgg gtgctcttcg atcccaacac cttgagcaag
     4261 gacggcaccg tgtccctcgg gggcatgcgc ttcagcgagg atggcgcctt cgtggcctac
     4321 cggctgtcca agggcggctc cgacgtgagc acctggaagg tccgcaacgt ggcctcgggc
     4381 gtggacctgc cggacagctt tcccgcgggc cgcatgggcg tgaacggctg ggccaaggac
     4441 ggcagcggtt tctactacac cgactatccc aaggtcgagg ccggcaaggc cctgacggcg
     4501 gtctacaaga accagaagct cttcttccac aagctgggcg atccggtgga gaaggacgtg
     4561 gtggtgtacg agcgtcccga ccagcccgac tggggcttcg gcgccggcgt gacggacgat
     4621 ggccgctggc tggtcatctc ccagagccag ggcaccgagc ggaagaaccg ggtgttcctg
     4681 aaggacctcc gccaggcagg cagccccgtg gtgcctctgt tcggccagta cgatggttcc
     4741 tattccatcc tcggcaatga cggcgacacc ttctacgtcc acacggattc cggcgcgccg
     4801 cgccaccgca tcgtggccgt ggacctcaag gattccagcc ccaaggcctg gaaggacctc
     4861 atcccggaag ggaagggccg ggacgtcctc gcaggggcgg acctcttcgg caacaccctc
     4921 gtcgtcacct ggaaggtgga cgccctcaac actgtgaagc tctacgatct gaagggccgc
     4981 ttcctcaagg agatcaagcc cgaagggctg ggcaacctgg gcggcttcgg cgggcggcgc
     5041 gaggacaccg agaccttcta caccttcacc tcctacaacc agcccccgac cctctaccgc
     5101 tatgacctga agaccggcgt cagcaccgtc ttccggcagc ccaaggtgga catccggccc
     5161 accgactacg aggtgaagga agtcttctac cccagcaagg acggcacgct cgtccccatg
     5221 ttcctggccc acaagaaggg cctcaagctg gacggcacca atcccacgct gctctacgcc
     5281 tacggcggct tcaacatcgc gcagtcgccg ggctattccc cggtctccca gacctggatg
     5341 gagatgggcg gtgtctacgc cgtggcctgc ctgcgcggcg gcagcgagta tgggaagacc
     5401 tggtgggagg ccggcaagcg cgagacgaag cagaacgtct tcgacgactt catcgccgcc
     5461 gccgagtggc
//
LOCUS       DASUDT010000335        13437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1253391, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000335 DASUDT010000000
VERSION     DASUDT010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 13437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13437
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1253391"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..339)
                     /locus_tag="VFV26_06865"
     CDS             complement(16..339)
                     /locus_tag="VFV26_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX4845926.1"
                     /translation="MAENLTKAELVEAVAKTADITKAAAAAAIGCFLDCVAGHVSKGG
                     KVTLVGFGTFSQKSRKARTGRNPQTGLPIKIAASKSMSFKASKAAKAAKPKAAKKAAP
                     KGKKK"
     gene            complement(605..3148)
                     /locus_tag="VFV26_06870"
     CDS             complement(605..3148)
                     /locus_tag="VFV26_06870"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX4845927.1"
                     /translation="MSFALRMALREGSRQKGRLLVIVLCLAVGFAAFFATYGFSARVL
                     SGIRAESRSLLGADFAITSTGAFPEAVRQKAAALPGIQGHSLVYDLVSMARTGDGTLS
                     RLVEVRAVDGAYPLVGRLELQAGGKLHTGRVGGSGTAFVERGLADAWALGPGGSSVSV
                     GDGSLPVGGVIALDESRQASAFTLGPRILVDRGDAERLGLLGQQSRFTGRLLLTLVPG
                     ADAAKVRQALGGLIADAGQRLRLRSHEEAATALSRPIRNLNRFVQQLGLATLLLAMLG
                     AWAILTAFLDARSRDAAILRCLGAAPMAPAQIYGLLTLMLLGAAVALGLVVGLGVAAA
                     IPRWLGDLLPAVIREGSPAAPPLIETALAVAMIALLTLPPLVRLGAVKPLMLLREGGG
                     LQGGRVWFSRACAGLAFTLAVLLILRNAPSRAVGAGTALGMALLFLILYGTARLLLRL
                     YRRAARAMPLSLRLAFGQLGARRGLTALMMAVMGLAVFLTTATQFIKNDIVAPIASQQ
                     GQGRRPNLFLLDVQSAQRDQVAARLRAETGRDPMAAPIVRARLSAMGGRPVRENPARA
                     QGEDPGEPRGEGFRNREQNLTWRDRLGESEAVVAGRFWAPGTARTDEISLEQGFAESI
                     GARIGDELAFDVSGNEVKGRVTSLRKVQWQSFQPNFFIVMHPSLLQGAPAVHLLAAEA
                     DPQAKGRLQAALAEGFPNVTLIDVTEVMAKVGRVLDIIALITRALAALMLASALLVLI
                     ASLIAGRLGRQKDLALLRTIGASHGTLLRSLAWEFLILGGSSAALSTALAWVLAKAYT
                     SRVLELPAHPGIGLGLLLMAAAAGLTLAVGVAGSLRVLNVKPMDVLRGE"
     gene            complement(3145..3816)
                     /locus_tag="VFV26_06875"
     CDS             complement(3145..3816)
                     /locus_tag="VFV26_06875"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845928.1"
                     /translation="MISIRSVSKTFTSPSGEDLRVLQEVSLEIPAGASVAIQGPSGSG
                     KSTLLGLMAGLDQPTAGEVVVNGQSITGLGELALSRFRAQNLGFVFQAYHLLPHFSAL
                     QNVVIAAEIAGLAGAGAKALEALARVGLQERAEHLPAQLSGGECQRVALARAIVARPP
                     ILLCDEPTGSLDPRNADRVFDLLLELQRDLGATLVLVTHDAHLAGRMGLHITLERGRI
                     VPGAA"
     gene            3866..4549
                     /locus_tag="VFV26_06880"
     CDS             3866..4549
                     /locus_tag="VFV26_06880"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEX4845929.1"
                     /translation="MRKVRCPAAALPLLLVLAAACGRPAPEAAEPTAPAAQTPQAASG
                     TLVFLGDSLTAGLGLPREEAFPALIEARLAAEGRPWKVVNAGISGDTTAGGAARMDWI
                     YRQKVDVMFVCLGANDGLRGIPVHETERNLRAILARARMEGTRVVLAGIQLPGNYGTR
                     YRAAFARIFPRLAEEFQIPLLPFLLEGVAMEPSLNQSDGIHPNAAGTRRVASHAWTAL
                     DPVLRAPAR"
     gene            4605..6440
                     /locus_tag="VFV26_06885"
     CDS             4605..6440
                     /locus_tag="VFV26_06885"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845930.1"
                     /translation="MTESKTKPKVDTARAWREARALLRQHRGSLALGLLLMLISRLAG
                     LVLPASTKYLIDEVLGKHNGHLLLPLALGAGAATLLQAATSYANSQVVSVAAQRAIMA
                     MRQRVQDHILRLPIRYFDSTKSGVVISRVMNDAEGVRNLVGTGIIQLVGGGLTAVISL
                     AVLFWLNWKLTLATVIFLAVFGGAMALAFRKLRPLFRKRSEITADITGRLTESVGGIR
                     ILKVYVAEDRERKIFAEGTERLFKNIAGTLTGTSAITAFGTAIIGAIGVLIMIIGGQA
                     ILSGAMTLGDLIMYTFFVGMMAAPVVQIANIGTQVSEAFAGLDRVREILDMPTEDQAD
                     ASREPLAALEGTVAFRDVHFAYEEGSPVLKGVSFEVPAGSTVALVGSSGSGKSTIISL
                     VMAFNHPQQGQVLVDGKNIEALRLREYRAKLGVVMQDNFLFDGTVADNIGFAKPGATR
                     EEIEAVGRIAHVHEFVERFDLGYDTVVGERGVKLSGGQRQRVAIARAILADPRILLLD
                     EATSSLDSESEALIRDGLRRLRAGRTTFVIAHRLSTIESADQILVVEHGEIVERGRHQ
                     ELLAMNGRYKQLHDRQHGVEMDQFINPGEDFTALGARNSPPVPGM"
     gene            6545..7120
                     /locus_tag="VFV26_06890"
     CDS             6545..7120
                     /locus_tag="VFV26_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845931.1"
                     /translation="MFGQRVSIFVREQVAMLKLRDTYDLLDPDSQMVLGQAKDEPATW
                     AKWLRLIVKKVMLPTTLNVYSGSNPQPVLSVKKHAGFLRTNLAVVDGQGRVLAQLRSK
                     LFSLGGAFLILDPAGQEIGQMKGDWKGWDYAATLHGQPAGIVTKKWAGALKEVFTNAD
                     QYLVQSERPEQLPLLLGLALAVDVVYKERQG"
     gene            complement(7136..7924)
                     /locus_tag="VFV26_06895"
     CDS             complement(7136..7924)
                     /locus_tag="VFV26_06895"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX4845932.1"
                     /translation="MHIGHALTVMAAAFLAGAINSIAGGGTLVSFPALMGIGMTGQQA
                     NVTSTLALWPGSIGGFWGHREDLVGIREFALRLMPPSLLGGALGAWLMLVTPQKVFDQ
                     LVPWLILVATVLLAANDPVNKLLKKMGSHDRTPGWWIGAMVFQFIVGIYGGYFGAGIG
                     ILMLAALSLLGLTDIHQMNGLKNLLALCINGIAIFAFLAMEFLRHPGNVQWKYMLVMA
                     VAAGLGGLFGSHMAHRVGRKTVRVGVVSIGFILSAWYFYKRYGI"
     gene            complement(7955..8545)
                     /locus_tag="VFV26_06900"
     CDS             complement(7955..8545)
                     /locus_tag="VFV26_06900"
                     /inference="COORDINATES: protein motif:HMM:NF017747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HutD family protein"
                     /protein_id="HEX4845933.1"
                     /translation="MRWTHLKPADGRAMPWRNGGGTTLELAVDPPEATLATGFRWRLS
                     SAEVASSGPFSAFPGMERCLLLLEGAGFDIDFGPRGRVELREPLAPLFFSGDWPAEAT
                     LVEGPCTDLNVMCDPRHGRARVETLRFEGPRSLDLAGAPLLIFVAQGTVAVPFLGLHL
                     GRRHTLRIEDGTGLLAVAAGLGGASLVMARMGPAAF"
     gene            8586..9518
                     /gene="asd"
                     /locus_tag="VFV26_06905"
     CDS             8586..9518
                     /gene="asd"
                     /locus_tag="VFV26_06905"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00163.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HEX4845934.1"
                     /translation="MHLPWLPPARAALILALIWAIYVLLWTPGPLSLRALGLYPKKLG
                     SRVAGWAASRSLPAAWREPLLGRFARHYGIDLAEAEFPLAEYPSLQALFTRRLKPGLR
                     PQEAPLPGFVNSPVDARIIACGRIESGTAIQAKGLPYRIAELLRHDPGAARFEGGHFL
                     TLYLSPRDYHRIHVPMEGRVSAVSRVEGELWPVNDASTGHIPRLYERNRRATWTALGT
                     GASQGLEVAAVLVGATHVGGVVIDGRWLGGRELPRNGGFPVNLLPCAPGDDLGTFEFG
                     STVVLLVSGPRAKDWAPLRTEGDVKVGQRLGAYR"
     gene            9515..10186
                     /gene="scpB"
                     /locus_tag="VFV26_06910"
     CDS             9515..10186
                     /gene="scpB"
                     /locus_tag="VFV26_06910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX4845935.1"
                     /translation="MSDSEIFNQDPLWDEGGDLPGALEALLTAAGEVLDLARLRELTG
                     LGDGALQQGIEKLQERLSGSCGLRLLEVGGGWRMATSPVYKEMVARLVTTTRSGKLTP
                     AQIEALAIIAYRQPVTITELNAIRGVTSSANQVKSLMERQLIIPAGRKPVVGRPMTYA
                     TTQAFLLHFGLKSLHDLPQLEDFGEGRLEVQALAALEPPMPEDGLFGEGGMITEDLPA
                     EEEAP"
     gene            10183..10431
                     /locus_tag="VFV26_06915"
     CDS             10183..10431
                     /locus_tag="VFV26_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845936.1"
                     /translation="MNQPTLTLEEQPAPAKPQSPTGFVLSPGQKGGLLILVLGILYLR
                     IWRRKQKHILVCSHCGKKNPPHQSNCQKCAAPLMRIHE"
     gene            complement(10730..10960)
                     /locus_tag="VFV26_06920"
     CDS             complement(10730..10960)
                     /locus_tag="VFV26_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845937.1"
                     /translation="MDLSQDQQAFYEATRERCRSEVSQINNTIATEVQRVKDLLTSLS
                     NRKTAVLQMYGAACEVLGQENDLAEESIDIEF"
     gene            complement(11022..12815)
                     /locus_tag="VFV26_06925"
     CDS             complement(11022..12815)
                     /locus_tag="VFV26_06925"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEX4845938.1"
                     /translation="MPRPLLLIVDGESLRTPGLVSAMEGDGWAIQWIRAEGAEAFLQG
                     GQIPDLLLLDSASPGGAGQELAGRLRERRPQLPVLVLTDDPGSGDPREAGVQEYLERT
                     RPDGEIAAALRRYRPEPVKLTTHDIFGDLLADLEGDPEPGPFAGRALPPVAVMETAGP
                     SDFTLSGISGVHDPFAWAGNPPEAPAAPGPRPAAAAAPAPLPEALEEYGNYFLLEKIA
                     IGGMAELFKAQQRGVQGFQKIVAIKRILPHFSDNEDFVTMFIDEAKLAAQLTHPNIVQ
                     IFDLGKAGSSYYIAMEYVNGRDLRTLLRKVREYGLPFPEQAAAFVVMKVAAALDYAHR
                     KRGFDDRELKLVHRDISPQNVILSTEGAVKLVDFGIAKAASKASHTVAGALKGKLLYM
                     SPEQATGQPLDNRSDLYSLGLVLFELLTGERCFQADSELGVLEKVRLGRISDLQTLNP
                     NVSKEMVAIVNRALQKGVDHRYPSARFMERDLRDYLQRQGTSIAEHDLAEYMNALLNG
                     TRENLEILMASRFPLPASLASGTHRTLAGRVDTAPGRISGPQAVLSPLPEEPEALEPV
                     AAAPRRPRWMLPVILGLAALLVTLLAIARWS"
     gene            12961..13167
                     /gene="rpsU"
                     /locus_tag="VFV26_06930"
     CDS             12961..13167
                     /gene="rpsU"
                     /locus_tag="VFV26_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX4845939.1"
                     /translation="MPLVKVKEDETFEFALRRFKRKCEKSGILSELKKRQHYEKPSTK
                     RKRKMLAARKKTLKRLAQERRLIG"
BASE COUNT         2127 a         4749 c         4601 g         1960 t
ORIGIN      
        1 tgctggatcg atcgactact tcttcttgcc cttgggggcg gccttcttgg cggccttggg
       61 cttggcagcc ttggcggcct tggaggcctt gaagctcatg gacttggagg cggcgatctt
      121 gatgggcagg ccggtctggg gattgcggcc agtgcgggcc ttgcgggact tctggctgaa
      181 ggtgccgaag cccaccagcg tgaccttgcc gcccttgctg acgtggccgg cgacgcagtc
      241 gaggaagcag ccgatggcgg cagccgcggc agccttggtg atgtcggcag tcttggcgac
      301 ggcttcgacg agttcagcct tggtgaggtt ctcggccatg tgctggcctc ctgtgtgaga
      361 gcgccaacgg gcgctggttg atttgtcgat tggatcttgc cgcaaattcc tatcaattca
      421 agcacagaaa atttctgttt cttcgaatcg gagcgaactt tccttcagga actgcgcggc
      481 ctgggcggtc cgggccccgg aagggaggtc gattccccaa tgatccgtcc ccatccggcg
      541 gccctgaagg agaacgctca tcggcccatc cacagggctt tcgcgagggc aagtgcctcg
      601 gcggtcactc cccgcggagg acatccatgg gtttgacatt caggacgcgg aggcttccgg
      661 ccacgcccac cgccagggtc agcccggccg ccgcggccat caggagcagg cccaggccga
      721 tgccgggatg ggccggaagc tcgagaaccc ggctggtgta ggccttggca agcacccagg
      781 ccagggccgt cgacagcgcc gcggaactgc cgcccaggat caggaattcc caggccaggc
      841 tgcgcagcag ggtgccgtgg gaggccccga tggtgcgcag cagcgccaga tccttctgcc
      901 gccccaggcg cccggcgatg aggctggcga tgagcaccag cagggccgag gccagcatca
      961 gcgccgccag ggcccgcgtg atgagggcga tgatgtcgag cacccggccc accttggcca
     1021 tcacctccgt cacgtcgatg agggtgacat tcggaaagcc ctccgccagc gcggcctgga
     1081 ggcggccttt ggcctgggga tcggcttcgg ccgccagcag gtggaccgcc ggggcgccct
     1141 gcagcagcga ggggtgcatg acgatgaaga agttcggctg gaagctctgc cactggacct
     1201 tgcggaggct ggtgacgcgt cccttcacct cgttgcccga gacatcgaag gccagctcat
     1261 ccccgatccg cgccccgatg gattcggcaa aaccctgctc cagggagatc tcatcggtcc
     1321 gggcggtccc gggggcccag aagcgcccgg cgaccacggc ctccgactcg cccaggcggt
     1381 cccgccacgt caggttctgc tcccggttcc ggaagccctc tccacgcggt tcgccggggt
     1441 cctctccctg ggccctggcc ggattctccc gcacgggcct gccgcccatg gcgctgagcc
     1501 tggcccggac gatgggcgcg gccatgggat cccgcccggt ctccgcccgc aggcgcgccg
     1561 ccacctggtc ccgctgggcc gactgcacat ccagcaggaa caggttgggt cggcggccct
     1621 gcccctgctg cgaggcgatg ggcgccacga tgtcgttctt gatgaactgg gtggccgtgg
     1681 tcaggaagac cgccaggccc atcaccgcca tcatcagcgc cgtcaggccc cgccgcgccc
     1741 cgagctgccc gaaggccagg cgcagggaca ggggcatggc cctggcggcg cggcggtaga
     1801 gccgcagcag cagccgcgcc gtcccataaa ggatgaggaa cagcagggcc atgcccaggg
     1861 cagtccccgc tccgaccgcc ctgctggggg cgttgcggag gatgagcagg accgccaggg
     1921 tgaaggccag tcccgcgcag gcgcggctga accagacccg cccaccctgg aggcccccgc
     1981 cctcccgcag cagcatgagg ggtttcacag ccccgaggcg caccaggggc ggcagggtca
     2041 ggagggcgat catggccacc gccagcgccg tctcgatgag gggcggggcc gcgggggagc
     2101 cttcgcggat caccgcgggc aacaggtccc ccagccaccg ggggatggcg gcggccacgc
     2161 cgagccccac caccagcccc agcgccacgg ccgcgcccag cagcatcagc gtcagcagcc
     2221 cgtagatctg cgcgggcgcc atgggcgccg ctcccaggca gcggaggatg gccgcgtccc
     2281 tggatcgcgc gtccaggaag gcggtgagga tggcccaggc tccgagcatg gccagcagca
     2341 gcgtggccag gcccagctgc tggacgaagc ggttgaggtt ccggatgggc cgggacaggg
     2401 ccgtggccgc ctcctcgtgg ctgcggagcc gcagccgctg gccggcatcg gcgatcagac
     2461 cgccgagcgc ctgacggacc ttggcggcat ccgccccggg gaccagggtc agcagcagcc
     2521 gccccgtgaa ccgcgactgt tggccgagga ggccgaggcg ctccgcatcc ccgcgatcca
     2581 ccaggatcct ggggcccagg gtgaaggcgc tggcctggcg gctctcgtcc agggcgatca
     2641 cgccgcccac gggcagggag ccgtccccca cggatacgga tgagccgccg ggcccgaggg
     2701 cccaggcgtc ggccagcccc cgctccacga aggcggtgcc ggaacccccg acccttccgg
     2761 tgtggagctt cccgcccgcc tggagttcca gcctgcccac caggggatag gccccgtcca
     2821 cggcccgcac ttccaccagg cggctgaggg tgccgtcccc cgtgcgggcc atgctcacca
     2881 ggtcgtagac gaggctgtgc ccctggatgc ccggcagggc cgccgccttc tggcgcacgg
     2941 cttcagggaa tgcgccggtg gaggtgatgg cgaagtccgc cccgagcagg gacctggact
     3001 cggcccggat gccgctgaga acccgggcgc tgaagccgta ggtcgcgaag aacgccgcga
     3061 atcccaccgc caggcagagg acgatgacga ggaggcggcc cttctgccgg gagccctccc
     3121 gcagggccat gcggagggcg aagctcatgc cgcgcccggc acgatccggc cccgttccag
     3181 ggtgatgtgg agccccatgc ggcccgccag gtgcgcatcg tgggtcacca gcaccagggt
     3241 cgctccgagg tcccgctgca gttccagcag caggtcgaag acccggtccg cgttgcgggg
     3301 atcgagggaa cccgtcggct cgtcgcacag gaggatgggt ggccgcgcca cgatggcccg
     3361 ggccagggcc acccgctggc attcgccgcc gctgagctgg gccggcaggt gctcggcccg
     3421 ctcctggagg cccacccggg ccagggcctc cagggccttc gccccggcgc cggccaggcc
     3481 ggcgatctcc gcggcgatca ccacgttctg cagggcggag aagtggggga gcaggtggta
     3541 ggcctggaag acgaagccca ggttctgggc ccggaaccgc gacagggcca gctcgccgag
     3601 gcccgtgatg gactggccgt tcaccaccac ctccccggcg gtgggctggt ccaggcccgc
     3661 catgaggccg agcagcgtgc tcttgccgct gccgctgggc ccctggatgg ccaccgaggc
     3721 gcccgcgggg atctccaggc tcacctcctg gagcacccgg aggtcttcgc cggaaggaga
     3781 ggtgaaggtc ttcgatacgg accggatcga gatcatgcgg caccctcacc catcagccta
     3841 gacgatgtcg tggcatcctt caggcatgag gaaggtccgc tgccccgccg ccgcactccc
     3901 gctcctgctc gtcctggcag ccgcctgcgg caggcctgcg ccggaagcgg ccgaaccaac
     3961 ggctcccgcg gcccagaccc cccaggccgc gtctggaacc ctcgtcttcc tgggggacag
     4021 cctcacggcc ggccttggcc tgcccaggga agaggccttc cccgccctca tcgaggcccg
     4081 cctggccgca gaggggcgcc cctggaaggt cgtcaacgcc ggcatcagcg gcgacaccac
     4141 cgccggcgga gccgcccgga tggactggat ctacaggcag aaggtggacg tgatgttcgt
     4201 ctgcctcggc gccaacgacg ggctgcgggg catcccggtc cacgagacgg aacggaacct
     4261 ccgcgccatc ctggcccggg ccaggatgga gggaacgcgg gtggtccttg ccggcatcca
     4321 actccccggg aactacggca cccgctaccg cgccgccttt gcccggatct ttccccgcct
     4381 tgccgaggaa ttccagatcc ccctgctccc cttcctcctc gaaggcgtcg ccatggaacc
     4441 cagcctgaac cagtccgacg gcatccaccc caacgccgcc ggcacccgcc gggtggcgag
     4501 ccacgcctgg accgccctgg atcccgtcct gcgggccccc gcccgctgat ggctggcggc
     4561 gagtcccctt cccgcaggcc ccggcctgcc tttccggtgg tggcatgacc gaatccaaga
     4621 cgaaacccaa agtggacacg gcccgcgcct ggcgggaggc ccgggcgctc ctgcggcagc
     4681 accggggctc cctggccctg ggcctgctgc tcatgctcat cagccggctg gcggggctgg
     4741 tgctgcccgc cagcacgaaa tacctcatcg acgaggttct cggaaagcac aacggccacc
     4801 tgctgctgcc gctggcgctg ggcgccggcg ccgccacgct gctgcaggcg gccaccagct
     4861 acgccaactc ccaggtggtc agcgtggcgg cccagcgggc catcatggcc atgcgccagc
     4921 gggtccagga ccacatcctg cgcctgccca tccgctattt cgacagcacc aagagcgggg
     4981 tggtgatctc ccgcgtcatg aacgacgccg agggcgtgcg caacctcgtg ggcaccggca
     5041 tcatccagct cgtgggtggc ggcctcacgg ccgtgatctc cctggccgtg ctgttctggc
     5101 tgaactggaa gctcaccctg gccacggtca tcttcctggc cgtcttcggc ggggccatgg
     5161 ccctggcctt ccggaagctc cgtcccctgt tccgcaagcg cagcgagatc accgccgaca
     5221 tcaccgggcg cctgaccgag tccgtgggcg gcatccggat cctgaaggtc tacgtggccg
     5281 aagaccggga gcgaaagatc ttcgccgagg ggaccgagcg gctcttcaag aacatcgccg
     5341 ggaccctcac gggcaccagc gccatcacgg ccttcggcac cgccatcatc ggtgccatcg
     5401 gcgtgctgat catgatcatc ggcggccagg ccatcctcag cggggccatg acgctgggcg
     5461 acctgatcat gtacaccttc ttcgtgggca tgatggcggc ccccgtggtg cagatcgcca
     5521 acatcggcac ccaggtgagc gaggccttcg cgggcctgga tcgcgtgcgc gagatcctcg
     5581 acatgcccac cgaggaccag gcggacgcca gccgggagcc cctcgccgcc ttggagggca
     5641 ccgtggcgtt ccgggatgtc cacttcgcct acgaggaggg cagcccggtc ctcaagggcg
     5701 tctccttcga agtgcccgcc ggcagcaccg tggccctggt gggctccagc ggctccggca
     5761 agagcaccat catctccctg gtcatggcct tcaaccatcc ccagcagggc caggtgctcg
     5821 tggacgggaa gaacatcgag gccctccgcc tccgggagta ccgcgccaag ctgggcgtcg
     5881 tcatgcagga caacttcctc ttcgacggca ccgtggccga caacatcggc ttcgccaagc
     5941 ccggcgccac gcgcgaagag atcgaggccg tgggccgcat cgcccatgtc catgaattcg
     6001 tggagcggtt cgatctcggc tacgacaccg tcgtgggtga gcgcggcgtc aagctgtccg
     6061 gcggccagcg ccagcgggtg gccatcgccc gggccatcct ggcggacccc aggatcctgc
     6121 tgctcgatga ggcgacctct agcctcgaca gcgaaagcga ggccctcatc cgcgacggcc
     6181 tgcgccgcct gcgggccggc cgcaccacct tcgtcatcgc ccaccggctc agcaccatcg
     6241 aaagcgccga ccagatcctc gtggtcgaac acggcgagat cgtggagcgc gggaggcacc
     6301 aggaactgct cgccatgaac ggccgctaca agcagctcca tgaccgccag cacggggtgg
     6361 agatggacca gttcatcaac cccggcgagg atttcaccgc gctgggggcc cgcaacagcc
     6421 ccccggtgcc cgggatgtga cggcgttttt tcctcaggcc gggaatggct catgagggtt
     6481 tggcgccgcg cttttcagcc cctggcttct tcctataggc tggaacatcc cttcaggagc
     6541 atccatgttc ggtcagcgcg tgtcgatctt tgtccgggaa caggtcgcga tgttgaagtt
     6601 gcgggacaca tacgacctgc tcgatcccga cagccagatg gtgctgggcc aggccaagga
     6661 cgaaccggcc acctgggcca agtggctgcg gctgatcgtc aagaaggtga tgcttcccac
     6721 caccctcaat gtctattccg gaagcaaccc ccagcccgtg ctgagcgtca agaagcacgc
     6781 cggcttcctc cgcacgaacc tggcggtggt cgacggccag ggacgggtcc tcgcccagct
     6841 ccgcagcaag ctgttctccc tgggcggcgc cttcctgatc ctcgatcccg ccgggcagga
     6901 gatcgggcag atgaagggcg actggaaggg ctgggactac gcggccaccc tgcacggcca
     6961 gcccgcgggc atcgtcacca agaagtgggc cggggccctg aaggaggtct tcaccaacgc
     7021 ggatcagtac ctggtccagt ccgagcgtcc ggaacaactg ccgctcctgc tgggcctggc
     7081 gctggccgtg gacgtggtct acaaggaacg gcagggctga tcccgcccgg gacggtcaga
     7141 tcccgtagcg cttgtagaag taccaggccg acaggatgaa gccgatgctg accacgccca
     7201 cgcgcacggt cttgcggccc acgcggtgcg ccatgtggga gccgaagagg ccccccaggc
     7261 ccgccgcgac ggccatgacg agcatgtact tccactgcac gttgccgggg tgccgcagga
     7321 actccatggc caggaaggcg aagatggcga tgccgttgat gcagagggcc agcaggttct
     7381 tcaggccatt catctggtgg atgtccgtga ggcccagcag gctcagggcc gccagcatga
     7441 ggatgccgat gcccgcgccg aagtagccgc cgtagatgcc cacgatgaac tggaagacca
     7501 tggcgccgat ccaccagccc ggcgtgcggt catggctgcc catcttcttc agcagcttgt
     7561 tgacgggatc gttggccgcc agcaggaccg tggccaccag gatgagccag ggcaccagct
     7621 gatcgaagac cttctggggc gtcaccagca tgagccaggc ccccagggcg cccccgagca
     7681 gcgagggcgg catcaggcgc agggcgaact cccggatgcc gacgagatcc tcgcggtggc
     7741 cccagaagcc gccgatggag cccggccaga gggccagggt gctggtgacg ttggcctgct
     7801 gcccggtcat gccgatgccc atcagcgcgg gaaaggacac cagcgtgccc cccccggcga
     7861 tggagttgat cgccccggcg aggaaggccg cggccatgac ggtgagcgcg tgtccgatgt
     7921 gcatgccctc tacgatgaca ggccgcccgg cggatcagaa ggcggcgggc cccatgcggg
     7981 ccatcaccag actggccccg cccaggcccg ccgccaccgc cagcaacccg gtcccgtcct
     8041 cgatgcgcag ggtgtgccgc cggcccagat gcagacccag gaagggcacg gccacggtcc
     8101 cctgcgccac gaagatgagc aggggcgcgc cggccagatc caggctgcgg gggccctcga
     8161 accgcagggt ctccacccgg gcccggccat ggcgggggtc gcacatcacg ttgaggtccg
     8221 tgcagggccc ttccaccagg gtggcctcgg cgggccaatc accggagaag aagaggggcg
     8281 ccagcggctc ccggagctcc acccgccccc gggggccgaa gtcgatgtcg aaacccgcgc
     8341 cctccagcag gagcaggcag cgttccatcc cggggaacgc cgagaagggc ccggaggagg
     8401 ccacctccgc ggagctgagc cgccaccgga aacccgttgc cagggtggcc tccggcggat
     8461 ccaccgccag ctccagggtg gtgccgcccc cgtttctcca gggcatggca cggccgtcgg
     8521 cgggcttgag atgggtccag cgcatggctc catcctacga gggcgcggcg ggttatcctg
     8581 gatggatgca tctgccctgg cttccaccgg cgcgcgccgc gctcatcctc gccctgatct
     8641 gggccatcta cgtcctgctc tggacgccgg ggccgctgtc cctccgggcc ctggggctct
     8701 atccaaaaaa gctgggttcc cgggtggccg ggtgggccgc gtcccgcagc ctcccagccg
     8761 cctggcgcga accgctgctg ggccgcttcg cccgccacta cggcatcgac ctcgccgagg
     8821 cggaattccc cctcgcggaa tacccgagcc tccaggccct gttcacacgg cggctgaaac
     8881 ccgggctccg cccccaggag gcgccgttgc ctggcttcgt gaacagcccc gtggacgcgc
     8941 gcatcatcgc ctgcggccgc atcgaatcag gcaccgccat ccaggccaag ggcctgccct
     9001 accgcatcgc cgagctgctc aggcacgatc ccggcgcggc ccgcttcgag ggcggccact
     9061 tcctcaccct ctacctgtcg cccagggact accaccgcat ccacgtgccc atggagggcc
     9121 gcgtcagcgc cgtcagccgc gtggagggcg agctctggcc cgtgaacgac gccagcaccg
     9181 gccacatccc ccgcctctac gagcggaacc gccgcgccac ctggaccgcc ctgggcacgg
     9241 gcgccagcca ggggctggag gtggccgccg tgctggtggg cgccactcac gtgggcggcg
     9301 tggtgatcga tggccgctgg ctgggcggcc gcgagctgcc ccggaatggc ggcttccccg
     9361 tgaacctgct cccctgcgcg cccggcgatg acctgggcac cttcgagttc ggctccaccg
     9421 tggtgctgct ggtgagcggc ccccgcgcca aggactgggc gccccttcgc acggagggcg
     9481 atgtgaaggt gggccagcgg ctgggggcgt accggtgagc gattccgaga tcttcaacca
     9541 ggacccgctg tgggacgaag gcggcgacct gcccggcgcc ctggaggcgc tgctcaccgc
     9601 cgccggcgag gtgctggacc tggcccgcct gcgcgagctg acggggctgg gggacggcgc
     9661 cctccagcag ggcatcgaga agctccagga gcggctcagc ggttcctgcg gcctgcgcct
     9721 cctcgaagtg ggcggcggct ggcgcatggc caccagcccg gtctacaagg agatggtggc
     9781 gcggctggtg acgacgacgc gcagcggcaa gctcaccccg gcgcagatcg aggccctggc
     9841 catcatcgcc taccgccagc ccgtgaccat caccgagctg aatgccatcc ggggcgtcac
     9901 cagcagcgcg aaccaggtga agagcctcat ggaacgccag ctcatcatcc cggcgggccg
     9961 caagcccgtg gtgggccgcc ccatgaccta cgccaccacc caggccttcc tgctgcactt
    10021 cggcctgaag agcctccacg acctgcccca gctggaggac ttcggcgaag gccgcctgga
    10081 agtccaggcc ctggccgccc tggagccgcc catgcccgag gacgggcttt tcggtgaagg
    10141 cgggatgatc actgaggacc tgcctgccga agaggaagca ccttgaacca gcccaccctc
    10201 accctggaag aacagcccgc gcccgccaag ccgcagagcc ccacggggtt cgtcctgagc
    10261 cccgggcaga agggcggcct gctgatcctg gtgctgggga tcctctacct gcgcatctgg
    10321 cgccgcaagc agaagcacat cctcgtctgc agccactgcg ggaagaagaa ccccccgcac
    10381 cagagcaact gccagaagtg cgccgcgccc ctgatgcgga tccacgagta ggggctgttt
    10441 tcaaagtggg gtgcggccgc gcaaggggcg ccgcccaagc gaggcaagga aagcgacgaa
    10501 ggcgatagtg gttctatcgg tgaggagctt gacgcagcat cgcgccgagc gccgcccctt
    10561 gccctccggg acgccgccca gccgcacccc tggctgcgtt ggcggcctcg aacgatgtcc
    10621 cgcatcgccc ttcggcctcc gccttgccat gggcgcggct ggacgacgtc gcggccacgc
    10681 cccactttga aaacagcccc tacggggcct ccggccaccc ggcggcagct cagaactcga
    10741 tgtcgatgga ctcttcggcg aggtcgttct cctggcccag gacttcgcag gcggcgccgt
    10801 acatctggag cacggcggtc ttgcggttgc tcaggctggt gaggagatcc ttcacgcgct
    10861 gcacttcagt ggcgatggtg ttgttgatct gggacacctc ggagcggcaa cgctcgcggg
    10921 tggcttcgta aaaggcctgc tggtcctggc tcagatccat gggaactccc ggggggatgg
    10981 agaaactgtt cggaaaagtt gattttatcc agattccgga ttcaggacca ccgcgcgatg
    11041 gccagcaggg tcaccaggag cgccgccaga ccgaggatca ccggcagcat ccagcggggg
    11101 cggcggggcg cggcggccac gggttccagc gcttccggct cctcgggaag gggtgacagg
    11161 acggcctggg ggccggagat cctgcccgga gcggtgtcca cccggcccgc cagggtccgg
    11221 tgcgttccgc tggcaaggct cgcgggcagc gggaaccggc tcgccatcag gatctccagg
    11281 ttctcccggg tcccgttgag cagggcattc atgtactccg ccaggtcgtg ttccgcgatg
    11341 gaggtgccct ggcgctggag gtagtcgcgc aggtcgcgct ccatgaaacg ggcggaagga
    11401 tagcggtggt ccacgccctt ctggagggcc cggttcacga tggccaccat ctccttggac
    11461 acgttcggat tcagggtctg cagatccgag atccggccca gccgcacctt ctccagcacg
    11521 cccagttccg aatccgcctg gaagcagcgc tcgcccgtga gcagctcgaa cagcaccagg
    11581 ccgagggagt acaggtccga gcggttgtcc aggggctgtc ccgtggcctg ctcggggctc
    11641 atgtagagca gcttgccctt gagggctccg gccacggtgt ggctggcctt gctggcggcc
    11701 ttggcgatgc cgaagtccac gagcttgacg gcgccttcgg tggagaggat cacgttctgg
    11761 gggctgatgt cccggtggac cagcttcaac tcgcggtcat cgaagccgcg cttgcggtgc
    11821 gcgtagtcga gggccgcggc caccttcatc accacgaagg ccgccgcctg ctccgggaag
    11881 ggcaggccgt actcccgcac cttccgcagc agcgtgcgga ggtcgcggcc gttcacgtat
    11941 tccatggcga tgtagtagga actgcccgcc ttccccaggt cgaagatctg cacgatgttc
    12001 gggtgggtca gctgggccgc cagcttggcc tcgtcgatga acatggtgac gaagtcctcg
    12061 ttgtcgctga agtgcggcag gatgcgcttg atggcgacga tcttctggaa gccctgcacg
    12121 ccccgctgct gggccttgaa gagctccgcc atgccgccga tggcgatctt ctccagcagg
    12181 aagtagttcc cgtactcctc cagggcctcg ggcaggggcg caggggccgc tgccgcagcc
    12241 ggtctcgggc ccggcgccgc cggggcctcg ggcggatttc cggcccaggc gaagggatcg
    12301 tgcactccgg agatgccgct gagggtgaaa tccgaggggc cggcggtttc catcaccgcc
    12361 acgggaggca gggctctgcc cgcgaagggg ccgggctccg ggtccccctc cagatccgcg
    12421 agcaggtcgc cgaagatgtc gtgggtggtg agcttgacgg gctccggccg gtagcggcgc
    12481 agggccgcgg cgatctcgcc gtcgggccgg gtgcgttcca ggtattcctg gaccccggcc
    12541 tcgcgcggat ccccgctgcc agggtcgtcg gtcagcacca gcaccggaag ctggggcctc
    12601 cgctcgcgca ggcgtccggc cagttcctgg cccgccccgc cgggggaagc cgaatccagc
    12661 agcagcaggt ccgggatctg gccgccttgc aggaaggcct cggccccctc ggcccggatc
    12721 cactggatcg cccatccatc gccttccatg gcagagacca gccccggagt ccgcagggac
    12781 tctccatcca caatgagaag cagggggcgg ggcatgggca tccagaagaa tccgtgaccc
    12841 ctcagggtag cgggagggat tcaggctcgc cataacccct ctgctgaggt agactttccg
    12901 ttcggtccgg tcctgcctgg cagcccgctt cgaaatccac gggaaaggag gtgcatccat
    12961 atgcctttgg tcaaggtcaa agaagacgag acgttcgagt tcgcccttcg ccgcttcaag
    13021 cggaagtgcg agaagtccgg catcctcagc gagctgaaga agcgccagca ctacgagaag
    13081 cccagcacca agcgcaagcg caagatgctc gccgcccgta agaagaccct caagcgcctc
    13141 gcgcaagagc gccgtttgat cggttgatcc tgccttcgtg caacgcttcg cgtcgcacgc
    13201 ataagggccc gcaaacgcgg gccctttttg ttttactggt agcggaaggt tgaagacgcg
    13261 ccatgaaccc cgaactccac gccctcgaat ttcccgatgc ggtgcgcctg atccagtccg
    13321 gcgcccgcac ggcgcctgcc caggcagcgc tgggggccat gcacccctgg gatggcctgg
    13381 ccgggcggcg gcggctccac cagatggagc tgcaggatct ctgggcccag tcgccgg
//
LOCUS       DASUDT010000336         2708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1165014, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000336 DASUDT010000000
VERSION     DASUDT010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165014"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..534
                     /locus_tag="VFV26_06935"
     CDS             178..534
                     /locus_tag="VFV26_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845940.1"
                     /translation="MAASKTRIDWALFLLRLAVGGMAVVQGFQVLRHARGAITMAHAS
                     TWGLALGEMVCGSLILVGIWVPLAGAILAVVLGWPLIHAWMHGAGLLSNLGALFRLLV
                     SLACALGGGGKWALER"
     gene            537..1370
                     /locus_tag="VFV26_06940"
     CDS             537..1370
                     /locus_tag="VFV26_06940"
                     /inference="COORDINATES: protein motif:HMM:NF021613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845941.1"
                     /translation="MLRPQMHETLWAFDAEWVPDPATGRRVLDLPKDLPEDEVVARMW
                     AYGGATEAEPRPYLKTILCRVVSIAAVIRTVKHGEVHHKLFALPEGPEALAEDELLRR
                     FLVALGDRKPQLVGFNSRDADLPILVQRAMVHRLSIPGLGRSADKWARDDFFDRYGNQ
                     HIDLREITGAWGKASSTLHELATACGIPGKLGTDGKSVIDLWRAGDVAGIVRYNQFDA
                     LTTFLVWLRAMTLAGHLTPEQMEAEEAQIRALIQQKAVVDPGFGVFLEGWDRLLDLGT
                     A"
     gene            1417..1719
                     /locus_tag="VFV26_06945"
     CDS             1417..1719
                     /locus_tag="VFV26_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845942.1"
                     /translation="MTQEIRPEDLIVTEQDGTRRINHDVIESYGLFNLPRATMRQALM
                     VYYDNASRQGRGAAQSVRTFITLASSITRFPRQVAINFTRGVAYRRNMRMLRRFSR"
     gene            complement(1755..2525)
                     /locus_tag="VFV26_06950"
     CDS             complement(1755..2525)
                     /locus_tag="VFV26_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEX4845943.1"
                     /translation="MKILCLGDVVGEPGRRLVEAFVPDLRRETGADLVVVNGENAAHG
                     HGITDTIAREWFDKYGVDVITTGNHAFDVKGIDAYFRQEPRILRPANHPPDTPGNGWV
                     KLHTPSGAEVLVVNLMGRVHMPSCDCPFRCVDALLQKERADLVIVDMHAEATSEAQAM
                     GYHLEGRAAAVLGTHTHVPTLDTKVLPGGTAYVTDIGMTGPYGGVIGMKKEASLGRFL
                     KVQRPRYEVAESDLQLHAVLVTTEGKKAISIERILRTL"
BASE COUNT          396 a          915 c          937 g          460 t
ORIGIN      
        1 caggcctcgt cgtggaaggg ccgcagcagg gaccggaagg ccgcctgggt ctcggcgtag
       61 tgggtctcgt tgtgccagag cgtgtcatcg gcatcgaagg cgagggtcgg gcgcatgggg
      121 gtcctggaaa aagattttca gcctacaacg gatacaatgg ctcattccga ggattccatg
      181 gccgcatcca agacccgcat cgactgggcc cttttcctgc tccgcctcgc cgtgggcggc
      241 atggcggtgg tgcagggctt ccaggttctc cgccacgctc ggggcgccat caccatggcc
      301 catgcctcca cctgggggct ggccctgggt gagatggtct gcgggtccct gatcctggtg
      361 ggaatctggg tgccgctggc gggcgccatc ctggcggtgg tgctgggctg gcccctgatc
      421 cacgcctgga tgcacggcgc gggcctgctt tccaacctgg gcgccctctt ccgcctgctg
      481 gtgagcctgg cctgcgccct gggcggcgga ggcaagtggg ccctggagcg ctagcgatgc
      541 tccggccgca gatgcacgag acgctttggg ccttcgacgc cgagtgggtg cccgatcccg
      601 ccacgggccg ccgggtgctg gatcttccga aggacctgcc cgaagacgag gtggtggccc
      661 gcatgtgggc ctacggcggc gccacggagg ccgagccccg gccctacctc aagaccatcc
      721 tctgccgcgt ggtgtccatc gcggctgtga tccgcaccgt gaagcacggc gaggtccacc
      781 acaagctctt cgccctgccg gaagggcccg aggccctggc cgaggatgag ctgctgcgcc
      841 gcttcctggt ggccctgggc gacaggaagc cacagctggt gggcttcaac tcccgggacg
      901 cggacctgcc catcctggtg cagcgggcca tggtgcaccg gctgtccatc ccgggtctgg
      961 gccggagcgc cgacaagtgg gccagggacg atttcttcga ccgctacggg aaccagcaca
     1021 tcgacctgcg ggagatcacc ggcgcctggg gcaaggcctc ctccaccctg cacgagctgg
     1081 ccacggcctg cggcatcccc ggcaagctgg gcacggacgg caagagcgtc atcgacctct
     1141 ggcgggcggg ggatgtggcg ggcatcgtcc gctacaacca gttcgacgcc ctgacgacct
     1201 tcctggtctg gctgcgggcc atgaccctgg caggccacct gacgcccgag cagatggaag
     1261 ccgaggaggc ccagatccgg gccctcatcc agcagaaggc ggtcgtggac ccgggtttcg
     1321 gggttttcct ggaaggttgg gaccggcttt tggatcttgg cacggcttga gcaaccggag
     1381 ggatgggccg atacactgtt gacccgagga gctgccatga cccaggagat ccgccccgag
     1441 gacctcatcg tcaccgagca ggacggcacc cgccgcatca accacgacgt gatcgagagc
     1501 tacggcctct tcaacctgcc ccgggccacc atgcggcagg ccctgatggt ctactacgac
     1561 aatgccagcc gccagggccg gggcgccgcc cagtccgtgc gcaccttcat caccctcgcc
     1621 agttccatca cccgcttccc ccgtcaggtg gccatcaact tcacgcgggg cgtggcgtac
     1681 cggcggaaca tgcggatgtt gcggcggttc agccgctgaa atcgcttcac gatttcagat
     1741 agaaggtaaa agcgtcagag cgtgcggagg atccgctcga tgctgatggc ctttttgccc
     1801 tcggtggtga cgaggacggc gtggagctgc aggtcgcttt cggccacttc gtaccggggg
     1861 cgctgcacct tgaggaaacg gcccaggctg gcctccttct tcatgccgat gacgccgccg
     1921 taggggccgg tcatgccgat gtccgtgacg taggcggtgc cgccgggcag caccttggtg
     1981 tccagggtgg gcacgtgggt gtgggtgccc aggacggcag cggcgcggcc ctccaggtgg
     2041 tagcccatgg cctgggcttc actggtggcc tcggcatgca tgtccacgat caccaggtcc
     2101 gcccgctcct tctggagcag cgcatccacg cagcggaagg ggcagtcgca ggagggcatg
     2161 tggacccggc ccatgaggtt gaccaccagc acttcggcgc cggaaggggt gtggagcttc
     2221 acccagccgt tgccgggcgt atcgggcggg tggttcgcgg ggcgcaggat gcggggctcc
     2281 tggcggaagt aggcgtcgat gcccttcacg tcgaaggcgt ggttgcccgt ggtgatgacg
     2341 tccacgccgt atttgtcgaa ccactcccgg gcgatggtgt ccgtgatgcc gtggccgtgg
     2401 gcggcgttct cgccgttcac caccaccagg tcggccccgg tctcccgccg gaggtccggc
     2461 acgaaggcct ccaccaggcg ccgccccggc tcccccacca cgtcgcccag gcaaaggatc
     2521 ttcatgcggc acctcctgtg ccgcaccctg cgggcttcgg cttcgccaaa gtggcactcc
     2581 gctcctgctg cgtgctcatg cggcacctcc acctagcgca cgcattgcgt gctccggcgc
     2641 gctccgcttg ccgaggtgga gcctccctgt gccgcaccct gcgggcttcg gcttcgccga
     2701 agtggcac
//
LOCUS       DASUDT010000337         4541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1562550, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000337 DASUDT010000000
VERSION     DASUDT010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4541
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562550"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2253
                     /locus_tag="VFV26_06955"
     CDS             <1..2253
                     /locus_tag="VFV26_06955"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4845944.1"
                     /translation="GPKGAAQDGLHEDVSLRVVKQPSAETLAVARETRKALDELRQSL
                     PEGMELTLMYDQGELVTHALNGVSWALLLGGVFVALVLVVLLGNLRGALIVIAVLPLA
                     TLGAAVPLQISGLGLNAMTLGGLAIAVGLLVDAAVIMVENLAHRLHEHRDHVEPRRVA
                     LTRAAAEVGVPILTAVLVILAVFIPLLALGGLAGRLYAPLAVAIAAAMTLSLVLSFTL
                     VPALVERFLPPGSRLEEPRLVAALKRVYRPALEWAMRHGATVRVLALGLTVPSLWLAL
                     NLGSNFLPTLDEGALLLNSILPAETSLAAVDEANFQLEQKLVKLPGVSSVYRRTGRSE
                     LTEDPMPHTISDVLVVLDGTRRTPAVQKDVAELAETLPYPVELTTPMQMRIAEGIGGT
                     PADIQVKLFHPDLAALQARLSGVQEALAKVPGVASITPEGAGSLPKWTVVPDEDALRR
                     LDVPRTLIAMTLKTALQGTETSPRFDGPQRIERVVRFPDDGRTSPETLKRLPLVLDDG
                     RVVELGQVARFEEASTPSLIRREAAQRRLALNVRTTGDLGGTADRLEQALKGLNLPKG
                     TVVKLGGKVEEARETQKRLVIAVGLALALVIGLLYLALGRWREVMVVALTLPDAFAGG
                     LFALWLAGETWNISSIVGMIGLFGVAVQNSLVLITQAKHLVAAGLPFHEALREASLGR
                     VRPKLMTAGAAILGLMPMLFGIGGSELERPLAIVMVGGLITSTLFTLLALPSFYAWVG
                     QPKGEGSSPG"
     gene            complement(2311..3474)
                     /locus_tag="VFV26_06960"
     CDS             complement(2311..3474)
                     /locus_tag="VFV26_06960"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4845945.1"
                     /translation="MAERLGPIEAPPGLDLLGPQGPEISRLFTRPFLVLHRASGLYTA
                     RICLLLLLDLGWEGRLRGGATLDGLCAGLADQARKPLAWMLPFLALEGLLTRQGDLYR
                     LEGQPDLDLAGIREAVELEAPGHAANFDLLDGVRSHIRPFFTEGKAGEGLLFDLALFP
                     LWMAYFRNENLGYFPNNLLTLLALREGLPEGAAVLELGGGAGSFAQLVAAQGAGQGWL
                     GRIAEYRFTDVAPTFLRRAQRDLKATAPGLPLAFQALDLNRPLGDQGIEAGSLDAIVG
                     INVLHVAQDLEATLRDLRTRLKPGGRLVIGECLKPTLDTPLYLEFFFSFIKAFTEVQL
                     DPRWRPRHGFLTPEAWDLALSHAGFTRLEHIPPPRPLMDRHPGFTVGALSAFA"
     gene            complement(3474..4409)
                     /locus_tag="VFV26_06965"
     CDS             complement(3474..4409)
                     /locus_tag="VFV26_06965"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX4845946.1"
                     /translation="MKVFSGSSHPDLAKGIATHMGMPLGKLKVTRFSNENIKVKIEEN
                     VRESDVFVIQTSCPPVSDNLLELLILIDALKFASAARITAVLPYFPYARSDKKDEARI
                     SITARLVADLLETAGADRVLTMTLHAPQILGFFRKPADQLLATPILTNYFKTKDLSNA
                     VVVATDAGAAKFAGHFAKRLSVPMAIIDKRRFDDSEKAQSVALIGDVKGKDAIIYDDE
                     IATGGSIKEAARILREFGARTVRVGVTHGVLSGNAVETLNSAGLDELVITDSIPVPAE
                     RGKALPNLKVLSTAALFGDAILRIHGGRSISEMMD"
BASE COUNT          692 a         1504 c         1636 g          709 t
ORIGIN      
        1 ggcccgaagg gtgcagccca ggatgggctg catgaggacg tgagcctgcg ggtggtgaag
       61 cagccctcgg cggagaccct ggccgtggcc cgggagaccc ggaaggccct ggacgagctg
      121 cgccagagcc tgcctgaagg gatggagctg accctgatgt atgaccaggg ggagctcgtc
      181 acccatgccc tgaacggcgt gagctgggcc ctcctgctgg gcggggtgtt cgtcgccctc
      241 gtgctggtgg tactgctggg gaacctccgg ggcgccctca tcgtcatcgc cgtgctgccc
      301 ctcgccaccc tgggagcggc ggtgccgctc cagatctcgg gcctggggct gaacgccatg
      361 accctgggag gcctcgccat cgccgtgggc ctgctggtgg atgccgccgt gatcatggtg
      421 gagaacctcg cccaccggct tcacgagcac agggatcatg tggagccccg gcgcgtggcc
      481 ctcacccgcg ccgccgctga ggtgggcgtc cccatcctca cggcggtgct ggtcatcctg
      541 gccgtgttca tccccctgct ggccctcggc ggcctggcgg gcaggctcta tgcgccgctg
      601 gcggtggcca tcgccgccgc catgaccctc agcctcgtgc tgagcttcac cctggtgccc
      661 gccctcgtgg agcggttcct gcctccgggc tccaggctgg aggaaccccg gctggtggcg
      721 gccttgaagc gcgtctaccg ccccgccctg gaatgggcca tgcgccacgg cgccaccgtc
      781 cgggtgctgg cgctgggact gaccgttccc agcctctggc tggccctgaa cctggggagc
      841 aacttcctgc ccaccctgga tgagggggcc ctgctcctca acagcatcct gccggcggaa
      901 accagcctgg ccgccgtgga cgaagccaac ttccagctcg agcagaagct ggtgaagctc
      961 cccggtgtct cgtcggtcta ccgccgcacg ggccgctccg agctgaccga ggaccccatg
     1021 ccccacacca tctcggatgt cctggtggtg ctggacggca cccgccggac gcccgcggtc
     1081 cagaaggacg tggccgagct ggcggagacg ctgccctatc ccgtggagct gaccacgccc
     1141 atgcagatgc gcatcgccga aggcatcggc ggtacgccgg cggacatcca ggtgaagctg
     1201 ttccacccgg atctggccgc cctgcaggcc agactctccg gcgtccagga ggccctggcc
     1261 aaggtgccgg gcgtggcgtc catcacgccg gagggcgcgg gctctctgcc gaagtggacc
     1321 gtggtgcctg acgaggacgc cctgcggcgg ctcgacgtgc cccggacgct cattgcaatg
     1381 acgctgaaga cggccctcca gggaacggag acctcgcccc gcttcgacgg cccccagcgc
     1441 atcgagcggg tggtgcgctt cccggacgat ggccgcacca gccccgagac cctcaagcgc
     1501 ctgcccctgg tgctcgacga tggccgcgtg gtggaactgg gccaggtggc ccgcttcgag
     1561 gaggccagca cccccagcct gatccgccgg gaggcggccc agcggcgcct ggccctgaat
     1621 gtccgcacca cgggggatct cggcggcacc gcggatcggc tcgaacaagc cctcaaggga
     1681 ttgaaccttc cgaagggcac cgtggtgaag ctgggcggca aggtcgagga ggcccgggag
     1741 actcagaagc gcctggtgat cgccgtcggc ctcgcgctgg ccctggtcat cggcctgctc
     1801 tacctggcgc tcgggcgctg gcgggaggtc atggtcgtgg cgctgaccct gcccgatgcc
     1861 ttcgccgggg gcctgttcgc gctctggctg gccggggaga cctggaacat cagctccatc
     1921 gtggggatga tcggcctctt cggcgtggcc gtgcagaaca gcctggtgct catcacccag
     1981 gccaagcacc tggtggctgc gggcctgccc ttccacgagg ccctgaggga agccagcctc
     2041 ggccgggtgc gccccaagct catgaccgcg ggcgcggcca tcctcggcct catgcccatg
     2101 ctgttcggca tcggcggcag cgagctggaa cggcccctcg ccatcgtcat ggtgggaggg
     2161 ctgatcacca gcaccctctt caccctgctg gccctgccca gcttctatgc ctgggtggga
     2221 cagccgaagg gggagggatc ctccccgggt tgattccttc ctcgttccaa taaagaagcg
     2281 gcgccccggc gccgcttctt tatttggaga tcacgcgaaa gcggacaggg cgcccacggt
     2341 gaaccccggg tggcggtcca tgagggggcg cggcggagga atgtgctcga gccgggtgaa
     2401 gccggcgtgg ctcagggcca ggtcccaggc ctcgggcgtg aggaatccgt gccgggggcg
     2461 ccagcggggg tccagctgga cctcggtgaa ggccttgatg aagctgaaga agaactccag
     2521 gtagaggggt gtgtcgaggg tgggcttgag gcattcgccg atgacgaggc ggccgccggg
     2581 cttcaggcgg gtgcgcaggt cgcgcagggt ggcctccagg tcctgggcca cgtgcagcac
     2641 attgatgccc acgatggcat ccaggctgcc ggcctcgatg ccctgatcgc ccaggggccg
     2701 gttcaggtcc agggcctgga aggcgagggg cagccccggc gcggtggcct tcagatcgcg
     2761 ctgggcccgg cggaggaacg tgggggccac gtccgtgaag cggtattcgg cgatgcggcc
     2821 aagccagccc tgcccggcac cctgggccgc caccagctgc gcgaaggagc cggcgccccc
     2881 tcccagttcg agcacggccg cgccttccgg cagcccttcc cggagggcca gcagggtgag
     2941 caggttgttc gggaaatagc ccaggttctc gttgcggaag taggccatcc agagggggaa
     3001 cagggccagg tcgaacagca ggccttcgcc ggccttgccc tcggtgaaga aggggcggat
     3061 gtgggagcgc accccgtcca gcagatcgaa gttggcggcg tggccggggg cctccagctc
     3121 caccgcttcg cggatgccag ccagatccag gtcgggctgc ccttcgagcc ggtagaggtc
     3181 cccctgccgc gtcagcagcc cctccagcgc aagaaaaggc agcatccagg ccaggggctt
     3241 gcgggcctgg tccgccaggc ccgcgcaaag accatccagg gtggcgccgc ccctcagccg
     3301 gccttcccag cccaggtcga gcaggagcag caggcagatg cgggcggtgt acaggcccga
     3361 ggcgcggtgc agcaccagga agggccgcgt gaacaggcgg gagatctccg gcccttgggg
     3421 ccccagcaga tcgaggcccg ggggcgcctc gatggggccg aggcgttcgg ccatcagtcc
     3481 atcatctcgc tgatgctgcg gccgccgtgg atgcggagga tcgcatcgcc gaagagcgcg
     3541 gcggtggaga gcaccttgag gttgggcagg gctttgcccc gctcggccgg gacggggatg
     3601 ctgtccgtga tgacgagctc gtcgagcccg gcggagttga gggtctccac ggcattcccg
     3661 gagagcaccc cgtgggtgac gcccacccgg accgtgcggg cgccgaactc gcgcaggatg
     3721 cgggccgcct ccttgatgga tccgccggtg gcgatctcgt cgtcgtagat gatggcgtcc
     3781 ttgcccttca catcgccgat gagggccacg ctctgggcct tctcggaatc gtcgaagcgg
     3841 cgcttgtcga tgatggccat gggcacggag agccgcttgg cgaagtggcc cgcgaacttg
     3901 gcggccccgg catccgtggc caccaccacg gcgttggaga gatccttcgt cttgaagtag
     3961 ttggtgagga tgggcgtggc cagcagctgg tcggcgggct tgcggaagaa gcccaggatc
     4021 tggggcgcgt gcagggtcat ggtgagcacg cggtcggccc cggcggtctc cagcaggtcg
     4081 gccaccagcc gggctgtgat ggagatgcgc gcctcatcct tcttgtcgct gcgggcgtag
     4141 gggaagtagg gcagcacggc cgtgatgcgg gccgcggacg cgaacttcag cgcgtcgatg
     4201 aggatcagca gctccagcag gttgtcgctg acgggtgggc aggaggtctg gatcacgaag
     4261 acgtccgatt cgcggacgtt ctcctcgatc ttcaccttga tattctcgtt ggagaaccgg
     4321 gtgaccttca gcttcccgag cggcatgccc atgtgcgtgg cgatgccttt cgccagatcc
     4381 gggtggctgc tcccggaaaa aaccttcatc tcgccgaaca tggatccccc gatctcgatt
     4441 ccaagtgtag ccgagcgatc ccgtggaggt cgtcacatgg aaaagcggga actgcgcaga
     4501 caggattaac aggatgaaaa gaaggatgaa caggattaaa g
//
LOCUS       DASUDT010000338         3225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1805831, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000338 DASUDT010000000
VERSION     DASUDT010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805831"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VFV26_06970"
     CDS             <1..552
                     /locus_tag="VFV26_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845947.1"
                     /translation="AIEAFKAEYEELKSGKRKLTKKEADEFNARGNKVAQDEQELLQL
                     NAALPVHKQNLVNAPKVAKILADNRKEAEGMVQAADEAVAKAKKIVASQNDEITAFNT
                     KLVMQKVKIVGKKNWVDAVLRNHDNVTTLAGAQSRAAFLNRMLVLDPGNAGAEKALEN
                     LKQGKEPFAKEAKPAKKAGTKKK"
     gene            584..1441
                     /locus_tag="VFV26_06975"
     CDS             584..1441
                     /locus_tag="VFV26_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845948.1"
                     /translation="MSRLGFLLVCALAAHLGAQSLTDRFKEVRGPWELQLERGDAPIV
                     RRGIEALLGREGLTVNPSDYNDMHALAALRSLAARACVAEGSWEDAVTHLQKAQAAAE
                     ENLATAEPLLANTRMEHELKLREFRDAMDKQAPRLKELDEAPGLSQDQLKLRQQLKIF
                     MDEQKAATAHSERALKDIEAILGRLRQTKDSTAKAAADWQAFLAKEKAEVSELGGTTR
                     YVAEKLEQVKADDARPQQERLAYARRLQKLDPANKDLTRLVNSLLGKDEEPEAAKPKA
                     RKKKPAPKK"
     gene            complement(1489..2142)
                     /locus_tag="VFV26_06980"
     CDS             complement(1489..2142)
                     /locus_tag="VFV26_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845949.1"
                     /translation="MRRSATLLLLPLLLASGAALRAQSPHMGFSLNLLFPTGEFASKT
                     YPAYYSPSAGYVIPPQKETYDVGIGGSFTVSFPMDRALAIRLNLSGSAENGANRAPGE
                     STINLRHSQFNLGGELQIFPQGTAFRHRGLYFVAGLSADFEQFDRSFGDPLYDYTDTT
                     RKSRLGATGGIGHSFGYDAGLRFTLEATFHKTITGNDLAAGDPPSTDFVKMSFGWVF"
     gene            2354..3157
                     /locus_tag="VFV26_06985"
     CDS             2354..3157
                     /locus_tag="VFV26_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX4845950.1"
                     /translation="MAWKQDLAKLKQQLGPEESASPAPKPLPKVAPKPQGPVVLDDED
                     AVFLSAMGLRPAPPRPARAAEAPVPPTAPGALAVPPDSAPAPAAPPLPPETFEAALKD
                     LKGLKPLSRGLRAQAASAQATPPVQPSPVPLPVVPPPAAPALPPIPPPAAPVEAPIPI
                     TPEATAPPVRFQLAAGMAIEVDGVLDVRGHSLQDAMERLKDRLGDGLVLGWRSLQVIL
                     GPDPKLHEGLLALLASGEAPMVARYAQAPVPMGGSQAWLLYLTAPSAHS"
BASE COUNT          603 a         1088 c         1081 g          453 t
ORIGIN      
        1 gccattgagg cgttcaaggc cgagtacgag gagctcaagt caggcaagcg gaagctgacg
       61 aagaaggagg ccgacgagtt caacgcccgg gggaacaagg tcgcccagga cgagcaagag
      121 ctgctccagc tcaacgccgc cctgcccgtc cacaagcaga atctcgtcaa cgccccgaag
      181 gtcgccaaga tcctcgccga caaccgcaag gaggccgagg gcatggtcca ggccgcggat
      241 gaagcggtgg cgaaggcgaa gaagatcgtg gccagccaga atgacgagat caccgcgttc
      301 aacaccaagc tggtgatgca gaaggtgaag atcgtgggca agaagaactg ggtggatgcg
      361 gtgctccgca accatgacaa cgtcaccacg ctcgccgggg cccagtcccg ggccgccttc
      421 ctcaaccgca tgctggtgct ggatccgggc aatgcgggtg ccgagaaggc gcttgagaac
      481 ctgaagcagg gcaaggagcc tttcgccaag gaagccaagc ccgcgaagaa ggccggcacc
      541 aagaagaagt gaccctgccg accccaccct ggaaggagcg tccatgagcc gcctcggatt
      601 cctgcttgtc tgcgccctgg ctgcccacct gggcgcccag agcctcaccg accgcttcaa
      661 ggaggtccgc ggcccctggg aactccagct ggagcggggc gacgcgccca tcgtgcgccg
      721 cggcatcgag gccctgcttg gccgcgaagg gctcacggtg aatccttccg actacaacga
      781 catgcatgcc ctggcggccc tgcgcagcct ggccgcccgg gcctgcgtgg ccgaaggcag
      841 ctgggaggat gcggtcaccc acttgcagaa ggcccaggcc gccgccgagg agaacctcgc
      901 caccgccgag ccccttctgg ccaatacccg catggagcac gagctcaagc tccgggaatt
      961 ccgggatgcc atggacaagc aggccccgcg cctcaaggaa ctggatgagg cgccgggtct
     1021 ttcccaggac cagttgaagc tgcgccagca gctcaagatc ttcatggatg agcagaaggc
     1081 cgccacggcc cacagcgaac gcgccctgaa ggacatcgag gccatcctcg ggcggctgcg
     1141 ccagaccaag gacagcacgg ccaaggcggc ggccgactgg caggccttcc tcgccaagga
     1201 gaaggccgaa gtttcagaac tcggtggcac cacccgctat gtggccgaaa agctggagca
     1261 ggtgaaggcc gatgacgccc ggccccagca ggagcggctg gcctacgccc ggcgcctcca
     1321 gaagctcgat cccgccaaca aggatctcac ccggctggtg aacagcctcc tgggcaagga
     1381 tgaggaaccc gaagcggcca agcccaaggc caggaagaag aagcccgcac cgaagaagta
     1441 gacatgaaga cggccccgca aggggccgtc ttcatgtcgc aggaaggatc agaacaccca
     1501 gccgaagctc atcttcacga aatcggtgct ggggggatcg ccggccgcca ggtcattgcc
     1561 ggtgatggtc ttgtggaacg tggcttccag cgtgaatcgc agcccggcat cgtagccgaa
     1621 gctgtggccg atgcccccgg tcgctcccag gcggctcttc cgggtggtgt cggtgtagtc
     1681 gtagagggga tcgccgaagc tgcgatcgaa ctgctcgaag tccgcggaca ggcccgccac
     1741 gaagtagagg ccccggtgcc ggaaggccgt gccctggggg aagatctgca gttcgccgcc
     1801 cagattgaac tgggagtggc ggaggttgat ggtggactcg ccaggggccc ggttcgcgcc
     1861 attctcggcg gatccgctga ggttcagacg gatggccagg gcgcggtcca tggggaagct
     1921 caccgtgaag ctgcccccga tgcccacatc gtaggtctcc ttctgggggg ggatgacata
     1981 gcccgcgctg gggctgtagt aggcggggta ggtcttgctg gcgaattccc ccgtggggaa
     2041 cagcaggttc aggctgaatc ccatgtgcgg gctctgggcg cggagcgcgg cgcccgaggc
     2101 gagcagcagg gggagcagga gcaaggtggc ggatcggcgc atgaggcctc cagaaaggtg
     2161 tggcttggaa tctacggggc gaaggacgtg ccagcttacg gcaaacggca tcaagccttg
     2221 gatgcagcgc agcatactct ggttgaaagc ccgcggcgat cgcggcgttt tgcctcggcc
     2281 gcgtgcggga ttgcaacagc aggctttggg ccagagccgc gatggcctac tctggacagg
     2341 acgaggaccg tacatggcgt ggaagcagga tctggcgaag ttgaagcagc agctgggacc
     2401 ggaagagtcg gcctctcctg cgcccaaacc cctgcccaaa gttgcgccaa agccccaggg
     2461 gcccgtggtc ctggatgacg aggatgccgt cttcctttcc gccatgggat tgaggcccgc
     2521 gcccccccgg ccagccaggg cggccgaagc tccagtgccc cctacggcgc ccggcgcgct
     2581 ggccgttccg cccgattccg caccggctcc ggcggcgccc cctctcccgc ccgagacctt
     2641 cgaagcagcg ctcaaggacc tgaagggcct gaaacccctg tcccggggcc tccgggccca
     2701 ggcggcctcg gcccaggcca cgccgccggt ccagccctcc cccgttcccc ttccggtcgt
     2761 gccgccccca gcagcgcctg ccctgccgcc cattcctcct cccgcggccc ccgtcgaagc
     2821 tcccattccc atcactccag aggccacggc gccgccggtg cggttccagc tggccgcggg
     2881 catggccatc gaggtggacg gggtgctgga tgtccggggc cactcactcc aggacgccat
     2941 ggaacggctg aaagaccgcc ttggagatgg cctcgtgctg ggctggcgca gcctccaggt
     3001 catcctcggc cccgatccca agctccacga gggcctgctg gccctcctgg cctccggcga
     3061 ggcccccatg gtggcccgct acgcccaggc gcctgtgccc atgggtggca gccaggcctg
     3121 gctgctctac ctcaccgccc cctccgccca ctcctgatcc gaacacccgg agattcccca
     3181 tgagcttgct ggcggtcggc agtgtggcct tcgacgacct ggaaa
//
LOCUS       DASUDT010000339         7993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_82506, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000339 DASUDT010000000
VERSION     DASUDT010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7993
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82506"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VFV26_06990"
     CDS             <1..597
                     /locus_tag="VFV26_06990"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX4845951.1"
                     /translation="AGGDGDGFSIGGGHIAHLIRRNIDITYIVMDNQIYGLTKGQLSP
                     TSQKGRVTCTSRYGSMENPVNPLLYVLAYGAGFVAQASPTDLAGMAATIEEAIRYPGF
                     AFVNIQSPCVTYGEEAQQIKGLKAISESLKDLGHNPEDRLAAMDLAQHYGEKLHLGVF
                     YRNPEPQPTYDALVRERQALLSKDALPKERILDLFIKK"
     gene            606..1127
                     /locus_tag="VFV26_06995"
     CDS             606..1127
                     /locus_tag="VFV26_06995"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEX4845952.1"
                     /translation="MATRIDFASLSLMDALDLAVLIEEEAQERYEEFAAQMDQHRTPE
                     AAAFFRLMAINEAKHGRELAARRSQLFGTAPATATRAMIFDVEAPDYDAARAFMSPRR
                     AMKAAMASEAKAHAFFVAALPAIQNPEVRALFEELRDEEVYHQELVKTELAKLPPDSG
                     LSDEDFVDEPTAQ"
     gene            complement(1226..1897)
                     /locus_tag="VFV26_07000"
     CDS             complement(1226..1897)
                     /locus_tag="VFV26_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845953.1"
                     /translation="MSLRNLPPSERLTATLAILALAAFLGGGLAFVAGQERAARAATA
                     PPPAQSRLMAVLEGVMAPNVSAGEAAVFRTWIQGGATREAYAPVDAVVSNNCASCHSP
                     GGQYPRLTTFEDLRPLALETAGGSLYAMLGARTLHFVAFPLVFLVAAFAYLRRAAWTG
                     RRMLMGACAAAVLFNAGQWWLRQGHPGHAWAPWTALGLLAVAFLALTAVVLAELWRGT
                     TEGKS"
     gene            1987..2955
                     /locus_tag="VFV26_07005"
     CDS             1987..2955
                     /locus_tag="VFV26_07005"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4845954.1"
                     /translation="MLLFLPLTPPALLEAAPDRDLAFPGFNAFPLKGSVKAGGAHPYF
                     AVMVAGSGPTDRDWSNPLIPVPSHGGRDVAAWLQGQGIGSLRYDKRFIGSKDPKLDIS
                     LDAQVGDLKAALRAARALPEAKGKKLLLVGHSEGALLSLLAAGEADAVLLLALPGMSM
                     GKLIRAQVKGQLDAAKAPADVSAQNLGHLDAALDAIRKNRDLPEAASGVAPGVAALAR
                     GLARPESRAFVRDLLDLDPWGAAQRLVVPCAVAWGDRDIQTWKPEALPADFKGTVIQI
                     PEANHLLKRETRDRAGLSGLTAATTYGDATPLADLAPLAAWLKGLK"
     gene            3022..5568
                     /locus_tag="VFV26_07010"
     CDS             3022..5568
                     /locus_tag="VFV26_07010"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 metallopeptidase family protein"
                     /protein_id="HEX4845955.1"
                     /translation="MRRVLPAALAVCLAAAPAMAEAPNPSQFLKLPVGADRTLADYAQ
                     ITSYFHALAAASPRVQVENLGRTTNGQPLIMAVISSEANLRNKAKHQEIARKLADPRG
                     LTEAQIEALAKEGKAIVLVTCSIHASEIGASQMAMEWAHGLATAQDAETRRRLDNVIL
                     LLMPSLNPDGQVMETEYYRKQLGTRYEGGRLPWLYHPYVGHDNNRDWYMLTQKESLAV
                     NRMAYHQWFPQVWLDEHQMGATGPRMFVPPYANPVAAEVHPLVWRTVDLLGSAMSLRL
                     EEAGKAGVAYGTMFDAYWPGGTKNTGWWKNVVGLLTEVASARLASPAHIDATELSAGG
                     KGLVEYKPQVNFPNPWKGGAWRLRDIMDYERIASDALLESCANLKSDLLRNRARMAQA
                     SIQAGDPALFYRLPLTQRDPVAAARLAHLMAENGAEVRVAGDGSYLLPTAQPLGRFVK
                     EMLEPQRYPETRPAAGAAPMAPYDVAAWTLPMMMGVQVEKTQLSETQRSATHLLKAGD
                     WPKGGITGNGAVAVLDRRSTAAAGLLNEALKSGQASVALEAFEAEGKRFEAGSVLLKA
                     GSGLDGLAARHHVALRTLSGKPAVKQAALKAPRVGLLKPWAVSMDEGWTRWILEQHGF
                     APRSLEPKAVQAGKLHEAFDVIVLPDVAKGLLLEGRRTEGDARRFMEEAPPEYSGGLG
                     KEGVKALKAFVEQGGTLVALSASSEFLIDELGLPVRNTLSGGRGGEAFACPGSILHMR
                     FDGAHPVAYGMAAEGFGFMDGRLAFQTLPASPQNRRAVIASYPDDARDILASGWIKGP
                     EQLERKAAAVSVELGKGKVVLFGFRVQHRAQTEETFKLLFNALYWSAMGD"
     gene            6047..6790
                     /gene="fabG"
                     /locus_tag="VFV26_07015"
     CDS             6047..6790
                     /gene="fabG"
                     /locus_tag="VFV26_07015"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX4845956.1"
                     /translation="MFRLDGKIALVTGASQGIGEAIAKQLAAQGATVVCAARTLNKLQ
                     EVADAITAAGGKADVVAADLSDTASVKAAIAATVERHGAIHILVNNAGITRDKLLIQM
                     KEDDWDAVIDTNLKGAWTAIQAATKPMMKQRWGRIINIASVVGQMGNAGQSNYVAAKA
                     GLIGLTKSVARELASRNVTANAVTPGYIETAMTAGLPEDVKAEFTKQIPLGRMGTAED
                     IAASVAFLASDEAGYVTGQVLSVNGGMYM"
     gene            complement(6821..>7993)
                     /locus_tag="VFV26_07020"
     CDS             complement(6821..>7993)
                     /locus_tag="VFV26_07020"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4845957.1"
                     /translation="RAAGLMDRGEFKEAAPAFQLAALQAPDFTPAVLGYARCLSRLAD
                     VPSEPVFHWARWSARAQGDRTSEMKALHYLAVRLGDRGQWEASDRAGREALELAQALG
                     ASAFEAGIHATLGVNFQRQHKLAEAEAEYQQALARYQSLGDRLNATRALNNLAVIQKG
                     RGHLKEAEARYQSALQTVQAYGDRWGESFITNNLGDLALAQEGGLDRAEAFFRKARSI
                     REAIGDQNGLAYSLMGLASVAQARGELDRAESLDRQFLEQARRTQLRPLEALALYNLG
                     EVHRAAGRFASARGFYRESLAIHQELRDAHMETHCLAGEAECLAREGRRAMARVLLDR
                     SRTLSTEETPYILRAHAWLARTEGRAEEARAAFTKALAAARIQAPEILGELREAAR"
BASE COUNT         1268 a         2812 c         2784 g         1129 t
ORIGIN      
        1 gcaggcggcg acggcgacgg cttctccatc ggcggcggac acatcgccca cctgatccgc
       61 cgcaacatcg acatcaccta catcgtgatg gacaaccaga tctacggcct caccaagggc
      121 cagctctcgc ccacgtccca gaagggccgc gtcacctgca ccagccggta cgggagcatg
      181 gagaaccccg tcaatccgct cctctacgtg ctggcctacg gcgccggttt cgtggcccag
      241 gcctcgccca cggacctcgc gggcatggcg gccaccatcg aggaggccat ccgctacccc
      301 ggcttcgcct tcgtgaacat ccagtccccc tgcgtgacct acggcgagga ggcccagcag
      361 atcaagggcc tcaaggccat cagcgaatcg ctgaaggacc tcggccacaa ccccgaggac
      421 cgcctggcgg ccatggacct ggcccagcac tacggcgaga agctgcacct cggcgtgttc
      481 tacaggaacc ccgagcccca gcccacctac gatgccctgg tgcgcgagcg ccaggccctg
      541 ctgtccaagg acgccctccc caaggagcgc atcctggatc tcttcatcaa gaagtaggag
      601 ggaccatggc cacgcggatc gattttgcca gcctgagcct catggacgcc ctcgatctgg
      661 cggtcctcat cgaggaggag gcccaggaac gctacgagga attcgcggcg cagatggacc
      721 agcaccgcac gcccgaggcg gcggccttct tccgcctcat ggccatcaac gaggccaagc
      781 acggccggga gctggccgcc cgccgcagcc agctgttcgg cacggccccc gccacggcca
      841 cccgggccat gatcttcgac gtggaggcac cggactacga cgccgcccgc gccttcatga
      901 gcccccgccg ggccatgaaa gcggccatgg cctccgaggc gaaggcccat gccttcttcg
      961 tcgcggccct gcccgccatc cagaaccccg aggtccgcgc cctcttcgag gagctgcgtg
     1021 acgaagaggt ctaccaccag gaactcgtca agaccgagct ggccaagctg cccccggaca
     1081 gcgggctgtc ggacgaggac ttcgtggacg agcccacggc ccagtaggct cggtcgtcca
     1141 agccgggcaa aggcttttca ccaccaagac accaaggcac caagaaaagc agttcttggt
     1201 gccttggtgt cttggtggtg atctttcagc ttttgccttc agtggtgccc cgccagagtt
     1261 ccgcgagcac cacagctgtc agggccagga aggcgacggc gaggagcccc agggcggtcc
     1321 agggggccca ggcgtggccg ggatgcccct ggcgcagcca ccattgcccc gcgttgaaca
     1381 gcacggcggc ggcgcaggcg cccatgagca tccggcgccc ggtccaggcg gcccgccgca
     1441 ggtaggcgaa ggcggccacg aggaagacca gggggaacgc cacgaagtgc agggtgcggg
     1501 ccccgagcat ggcgtagagg ctgccgcccg cggtctccag ggccaggggg cgcaggtcct
     1561 cgaaggtggt gagccgggga tactggccac cggggctgtg gcaggaggcg cagttgttgg
     1621 atacgacggc gtccaccggc gcgtacgcct cccgggtggc gccgccttgg atccaggtcc
     1681 ggaagacggc cgcctccccg gcgctcacat tgggggccat gaccccctcc agcaccgcca
     1741 tcagccggga ttgggcgggc ggcggggcgg tggcggcccg ggcggcccgt tcctggccgg
     1801 cgacgaaggc gagcccgccg cccaggaagg ccgccagggc caggatggcc agggtggcgg
     1861 tcaggcgttc cgaggggggc aggttccgca ggctcatctc cccatggtac ccatcccgcc
     1921 ggatccgggg tcttttgccg ggagcccccg ggcactctgc ggcatcctgg gaacgacgag
     1981 gtacccatgc tgctgttcct tcccctgaca ccaccggccc tcctggaggc cgccccggac
     2041 cgggacctgg ccttcccggg cttcaatgcc ttccccctca agggcagcgt caaggcgggc
     2101 ggggcgcatc cctatttcgc ggtgatggtg gccgggtccg gccccacgga ccgggactgg
     2161 tccaaccccc tgatcccggt gcccagccac ggcgggcggg atgtggcggc ctggctgcag
     2221 gggcagggca tcggctccct gcgctacgac aagcggttca tcgggtcgaa ggatccgaag
     2281 ctcgacatct ccctggacgc ccaggtgggc gacctcaagg ccgccctgag ggccgcccgc
     2341 gcgctcccgg aggccaaggg gaagaagctc ctgctggtgg gccacagcga gggcgccctg
     2401 ctgtccctgc tggcggcggg ggaggccgat gccgtgctgc tgctggccct gcccggcatg
     2461 agcatgggca agctcatccg ggcccaggtg aaggggcagc tggacgccgc gaaggccccc
     2521 gcggacgtct cggcccagaa cctgggccat ctggacgcgg ccctggatgc catccggaag
     2581 aaccgggacc ttccggaggc ggcatccggc gtggcgccgg gcgtggcggc cctggcccgg
     2641 ggcctggccc gccccgaaag ccgggccttc gtgcgggacc tcctggacct ggacccctgg
     2701 ggagccgctc agcgcctggt ggtgccctgc gccgtggcct ggggcgaccg ggacatccag
     2761 acctggaagc cggaggcgct tcccgccgat ttcaagggca cggtgatcca gattcccgag
     2821 gccaaccacc tcctgaagcg tgaaacccgg gaccgggcgg gcctcagcgg gctcacggcg
     2881 gccacgacct atggcgatgc cacccccctg gcggacctgg cgcccctggc cgcctggctg
     2941 aaggggttga aatagggtga aaaaagcctt tccgggaatg cctcgtcttg tgatgatttg
     3001 gcattcatcc ccggaggttc catgcgccgc gtgcttcccg ccgctctggc cgtctgcctt
     3061 gccgccgcac ctgccatggc ggaggcgccc aatcccagcc agttcctgaa gctgcccgtg
     3121 ggcgcggacc gcaccctggc ggactacgcc cagatcacgt cctatttcca cgccctggcg
     3181 gccgccagcc cgcgcgtgca ggtcgagaac ctcggccgga ccaccaacgg ccagcccctc
     3241 atcatggccg tcatcagcag cgaggcgaac ctccggaaca aggcgaagca ccaggagatc
     3301 gcccggaagc tggcggatcc ccgggggctc accgaggcgc agatcgaggc cctggcgaag
     3361 gagggcaagg ccatcgtgct ggtgacctgc tccatccacg cttcggagat cggcgcctcc
     3421 cagatggcca tggagtgggc ccatggcctg gccacggcgc aggatgcgga gacccggcgg
     3481 cgcctcgaca acgtgatcct gctcctcatg cccagcctga accccgatgg ccaggtgatg
     3541 gagacggagt actaccggaa gcagctgggg acgcggtacg aagggggccg gttgccctgg
     3601 ctgtaccacc cctacgtggg ccacgacaac aaccgcgact ggtacatgct cacccagaag
     3661 gaatccctgg ccgtgaaccg catggcctac caccagtggt tcccccaggt gtggctggac
     3721 gagcaccaga tgggcgccac aggcccccgc atgttcgtgc ccccctatgc caatcccgtg
     3781 gcggcagaag tccaccccct ggtgtggcgc acggtggatc tgctgggcag cgccatgagc
     3841 ctgcgcctgg aggaggccgg caaggccggc gtggcctacg gcaccatgtt cgacgcctac
     3901 tggcctggcg gcaccaagaa cacaggctgg tggaagaacg tcgtgggcct gctcacggaa
     3961 gtggcctcgg cccgcctggc cagtcccgcc catatcgatg ccacggagct gtccgctggc
     4021 ggcaagggcc tggtggagta caagccccag gtgaacttcc ccaatccctg gaagggcggc
     4081 gcctggcggc tgcgcgacat catggactac gagcgcatcg cctcggatgc cctgctggaa
     4141 tcctgcgcga acctgaaaag cgacctgctc cgcaaccggg cccgcatggc ccaggccagc
     4201 atccaggctg gggatccggc cctgttctac cggctgccgc tgacgcagcg cgatcccgtg
     4261 gccgcggccc ggctggccca cctcatggcc gagaatggcg cggaagtgcg cgtggccggg
     4321 gacggctcgt acctcctgcc cacggcgcag cccctgggcc gcttcgtgaa ggagatgctg
     4381 gagcctcagc gctaccccga gacccgcccc gccgccggtg cggcgcccat ggcgccctac
     4441 gatgtggcgg cctggaccct gcccatgatg atgggcgtcc aggtggagaa gacgcagctg
     4501 agcgaaaccc agcgcagcgc cacgcacctg ctcaaggccg gggattggcc aaagggcggc
     4561 atcaccggca acggcgccgt ggccgtgctg gaccggcgca gcaccgccgc cgcgggcctg
     4621 ctcaacgagg ccttgaagtc cggacaggcg agcgtcgccc tggaggcctt cgaggccgag
     4681 ggcaagcgct tcgaggcggg ttccgtcctg ctgaaggccg gctccgggct ggacggcctc
     4741 gccgcccgcc accatgtggc cctgcgcacc ctcagcggca agcccgccgt gaagcaggcc
     4801 gccttgaagg ccccccgggt gggcctcctg aagccctggg ccgtgtccat ggacgaaggc
     4861 tggacgcggt ggatcctgga gcagcatggc ttcgcgcccc ggagcctcga gcccaaagcc
     4921 gtgcaggccg gcaagctcca cgaggccttc gatgtgatcg tgctgccgga cgtggccaag
     4981 ggactgctgc tggagggccg gcggacggag ggcgacgccc ggcgcttcat ggaggaggcg
     5041 cccccggagt acagcggggg cctcggcaag gagggcgtga aggcgctgaa ggccttcgtg
     5101 gagcagggcg gcaccctggt ggcgctgtcg gcgagttcgg aattcctcat cgatgagctg
     5161 gggctgcccg tgcggaacac cctgtccggg ggccgcggcg gcgaggcgtt cgcctgcccc
     5221 gggtccatcc tccacatgcg cttcgacggt gcccatcccg tggcctacgg catggcggcg
     5281 gaaggattcg gcttcatgga cggccgcctg gccttccaga ccctgcccgc ctcgccccag
     5341 aaccgccgcg ccgtcatcgc gtcgtacccc gatgacgccc gggacatcct ggccagcggc
     5401 tggatcaagg gccccgagca gctggagcgc aaggccgccg ccgtcagcgt ggagctgggc
     5461 aaggggaagg tggtgctctt cggcttccgc gtgcagcacc gggcgcagac ggaggagacc
     5521 ttcaagctcc tcttcaacgc gctgtactgg agcgccatgg gggactgatc ccaagcagcc
     5581 ttcaaagaaa aaaaaccaac ctgattttcg gcgacccaca gccatccctt tcaagatcaa
     5641 aagctgaaac cacggatgac acagatttca cagatgggcg ccgacccaac cggcatgggc
     5701 ccgccgaagg cggcctccgg ccctgccgga ggttcgtgtg ggcgccggtg ccgtgcatcc
     5761 aaaaaaagcg cgaccccggc gcccacacga gagcccatgc ccgcgaagcc ggcccggatg
     5821 tccttgcgaa ggccccggga cctgccttcg cgtccttcgc tcctttgatc ttcgcggcct
     5881 tcgcggtccg ctcttcgagt ggaggctcct cgacggaggt ggggcgttgc ctccgtgatc
     5941 cctctgtggt ttctgcgcct ccgtggtgga tctctgctgg tgatcgccag ggagcaggaa
     6001 gcccgcagcc cttgctagac tggaccctca tccatctgga ggttccatgt tccgcctcga
     6061 cggcaagatc gccctcgtca ccggcgccag ccagggcatc ggcgaagcca tcgcgaagca
     6121 gctcgccgcc cagggcgcca cggtggtctg cgccgcccgc acgctgaaca agctccagga
     6181 ggtggcggac gccatcaccg ccgcgggtgg caaggcggac gtggtggccg cggacctgtc
     6241 ggacacggcc tcggtgaagg ccgccatcgc ggccaccgtg gagcgccacg gcgccatcca
     6301 catcctggtg aacaacgcgg ggatcacccg cgacaagctg ctcatccaga tgaaggagga
     6361 tgactgggac gcggtgatcg acaccaacct caagggcgcc tggacggcca tccaggcggc
     6421 caccaagccc atgatgaagc agcgctgggg ccgcatcatc aacatcgcct ccgtggtggg
     6481 ccagatgggc aatgcgggcc agtcgaacta cgtggcggcc aaggcgggcc tcatcggcct
     6541 caccaagtcc gtggcccgcg agctggccag ccgcaacgtc accgccaacg ccgtcacgcc
     6601 gggctacatc gagaccgcca tgaccgcggg cctgcccgag gacgtgaagg ccgagttcac
     6661 caagcagatc cccctgggcc gcatgggcac cgccgaggac atcgcggcct ccgtggcctt
     6721 cctcgccagc gacgaggccg gctatgtcac cggccaggtg ctgagtgtga acggcgggat
     6781 gtacatgtag gcggaacggc ctgatggagg gcgctgaacc ctacctcgcg gcttccctca
     6841 gctcgccgag gatctccggg gcctggatgc gggccgcggc cagggccttg gtgaaggccg
     6901 cccgggcctc ctcggcgcgg ccttcggtgc gggccagcca ggcatgggcg cggaggatgt
     6961 agggggtttc ctcggtggag agggtcctgc tgcggtccag caggacgcgg gccatggcgc
     7021 ggcggccttc gcgggccagg cactccgcct ctcccgcgag gcagtgggtc tccatgtggg
     7081 cgtcccggag ttcctgatgg atggcgaggg attcgcggta gaacccgcgg gcggaggcga
     7141 accgcccggc ggcgcggtgg acctcgccga ggttgtagag cgccagggcc tccagggggc
     7201 gcagttgagt cctgcgggcc tgttccagga actgccggtc caggctttcg gcccggtcca
     7261 gctcgccccg ggcctgggcc acgctggcca ggcccatgag ggagtaggcc aggccgttct
     7321 gatcgccgat ggcttcccgg atgctgcggg ccttgcggaa gaaggcctcg gcccggtcca
     7381 ggccgccttc ctgggccagg gccagatccc ccaggttgtt ggtgatgaag gattcgcccc
     7441 agcggtcgcc gtaggcctgc acggtctgga gggcgctctg gtagcgggcc tcggcctcct
     7501 tgagatggcc gcgccccttc tggatcaccg ccaggttgtt gagggcccgg gtggcgttca
     7561 gccggtcgcc caggctctgg taccgggcca gggcctgctg gtactcggcc tcggcctcgg
     7621 ccagcttgtg ctggcgctgg aaattcacgc ccagggtggc gtggatgccg gcttcgaagg
     7681 cggaggcccc cagggcctgg gcgagctcca gggcctcgcg tccggcgcgg tctgaggcct
     7741 cccactggcc ccggtccccg agacgcacgg ccaggtagtg gagggccttc atctcgctgg
     7801 tgcggtcgcc ctgggcgcgg gccgaccacc gggcccaatg gaacaccggt tccgaaggga
     7861 catcggcgag gcggctgagg caccgggcgt agcccagcac cgcgggcgtg aagtcggggg
     7921 cctgcagggc cgccagttgg aaggcaggcg cggcctcctt gaattcgccg cgatccatga
     7981 ggccggcggc gcg
//
LOCUS       DASUDT010000340         2942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2114718, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000340 DASUDT010000000
VERSION     DASUDT010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2114718"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VFV26_07025"
     CDS             <1..323
                     /locus_tag="VFV26_07025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX4845958.1"
                     /translation="AVSVKLRGNPSLDAVREAWLRWKPEPQQLQLFSAPAVPIHVHTL
                     EDRPQVRRDVETDEGMSIHVGRLRPCPILGVKFALLGHNTERGAAGGSILNAELAHAK
                     GYLR"
     gene            320..1660
                     /gene="lysC"
                     /locus_tag="VFV26_07030"
     CDS             320..1660
                     /gene="lysC"
                     /locus_tag="VFV26_07030"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HEX4845959.1"
                     /translation="MIVLKFGGSSVADAVCMRQVAGLVRAALPQSPLVVLSAMGKTTN
                     GLFEAAKAAEAGDLAGAMARQRALMAAHRKAAEELFEGATPESLDVALTDLFGELELL
                     LRGVALLRELSPRSMDAIASLGERLSTRIFAAFLEGAWVDARTVLRTDAVFGEAAPQP
                     AAILPLAAHHLRPLLGPGRVVVTQGYIGATEDGLTTTLGRGGSDYSAALFGAALGAEE
                     VQIWTDVEGVLTCDPRIVPEALPIPELSFAEAAELAAFGAKVLHPATIQPAVEARIPV
                     TVRHTQKPQGRFTTISAEVRSGRSITALASRGPVTVLTVSSSRMLAQSGFLARLFEVF
                     GRRGVSVDLVATAEVSVSLTVEADVPLKALLEDLSAFAKVEMHEGRAIIAAVGERLKS
                     TPGLGARLLSSLGDINVEMISMGANEINLSLVVRQEQAAEALRRLHRVLVGGAP"
     gene            1657..2379
                     /locus_tag="VFV26_07035"
     CDS             1657..2379
                     /locus_tag="VFV26_07035"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4845960.1"
                     /translation="MSADRIGVFGKGRLAAVIAAEAGGALAWQAGRGEVPPSPVDVAI
                     DASVAEAVEAHLAWALETGTDLVIGATGWSLPDLEARVDGRIGVLAASNFSLTVALMA
                     RLATVMGRFAALDPARDPYLVEHHHRLKADAPSGTAKTLAAALLAGCPRKTEWTLGTP
                     APHQLSVGVVRAGAEFGTHTVGLDAPAEVLELTHTARSRAPFAQGALVAARWLRGRKG
                     VFSMDDLAADLLDPLFDFGGRP"
     gene            2376..>2942
                     /locus_tag="VFV26_07040"
     CDS             2376..>2942
                     /locus_tag="VFV26_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX4845961.1"
                     /translation="MTLDLSGLAVALATPFTPSGEVDLPAFRKLVRHVVAGGVDTLVP
                     LGSTGEAATILDDERDAIIAACLEESGGRPVVVGTGHNATRQAAALTKRAQALGAQGA
                     LVVTPYYNKPTPDGLVAHLAAVADAAPGLPLIAYNVPGRTGLNLTPAALLRLWENPQV
                     VAVKESSGNLAQIAEIARQLPKGKLLLSG"
BASE COUNT          390 a         1076 c         1076 g          400 t
ORIGIN      
        1 aggccgtcag cgtgaagctg aggggcaacc cctccctgga cgccgtgcgt gaggcctggc
       61 tgcgctggaa gcccgagccc cagcagctcc agctgttctc agcgcccgcc gttcccatcc
      121 atgtccacac cctggaggac cgcccccagg tgcgccggga tgtggaaacg gacgagggca
      181 tgagcatcca cgtgggccgc ctgcggccct gccccatcct gggcgtgaag ttcgcgctgc
      241 tgggccacaa cactgagcgc ggggcagcgg gtggcagcat cctcaatgcg gaactggccc
      301 acgcgaaggg gtatctccga tgatcgtcct caagttcggc ggcagcagcg tggcggatgc
      361 ggtctgcatg cggcaggtgg cgggcctcgt ccgggcggcc ctgccccagt cgcccctggt
      421 ggtgctgtcc gccatgggca agaccaccaa cggcctgttc gaggcggcga aggccgcgga
      481 ggccggggat ctggcggggg ccatggcgcg gcagcgggcc ctcatggccg cccaccggaa
      541 ggccgcggag gaattgttcg aaggcgccac gcccgaaagc ctggatgtgg cgctcacgga
      601 tctcttcggc gaactggagc tgctgctgcg cggcgtggcc ctgcttcgcg aactgagccc
      661 ccgcagcatg gacgccatcg cctcgctggg ggagcgtctg tccacgcgga tcttcgcggc
      721 attcctggag ggtgcctggg tggacgcccg cacggtgctg cgcaccgatg cggtgttcgg
      781 cgaggccgcg ccccagcccg cggccatcct gccgctggcc gcgcatcacc tccggcccct
      841 gctgggcccg ggccgcgtgg tggtgaccca gggctacatc ggcgccacgg aggacggcct
      901 caccaccacc ctgggccggg gcggcagcga ttattccgcg gccctcttcg gcgcggccct
      961 gggggcggag gaagtgcaga tctggacgga cgtggagggc gtgctcacct gcgacccccg
     1021 catcgtcccc gaggccctgc ccattccgga gctgagcttc gcggaggcgg cggagctggc
     1081 ggccttcggc gccaaggtgc tgcaccccgc caccatccag ccggcggtgg aggcccgcat
     1141 ccccgtcacc gtgcggcaca cccagaagcc ccagggccgg ttcacgacga tctccgcgga
     1201 ggtccgctcg gggcgctcca tcaccgccct ggccagccgg ggccccgtga cggtgctcac
     1261 ggtgagcagc tcgcggatgc tggcccaaag cggattcctg gcgcggctct tcgaggtgtt
     1321 cggccgccgg ggcgtgagcg tcgatctcgt ggccaccgcc gaggtgagcg tctccctcac
     1381 ggtggaggcg gacgtgccgc tgaaggccct gctggaggat ctctccgcct tcgccaaggt
     1441 ggagatgcac gagggccggg ccatcatcgc cgccgtgggg gaacgcctga aatccacgcc
     1501 gggcctgggc gcgcggctgc tgtcctccct gggcgacatc aacgtggaga tgatcagcat
     1561 gggcgccaac gagatcaacc tgagcctcgt ggtgcgccag gagcaggccg ccgaggccct
     1621 gcgccgcctg caccgcgtgc tggtgggggg tgcgccatga gtgcggaccg catcggggtc
     1681 ttcgggaagg ggcggctggc cgccgtcatc gccgccgagg cggggggcgc cctggcctgg
     1741 caggcggggc gcggggaggt gcccccctcg ccggtggacg tggccatcga cgccagcgtg
     1801 gcggaggccg tggaagcgca cctggcctgg gccctggaga cggggacgga cctggtgatc
     1861 ggcgccacgg gctggtccct gccggacctg gaggcccggg tggacgggcg catcggcgtg
     1921 ctggccgcct cgaacttctc gctcaccgtg gcgctgatgg cgcggctggc cacggtgatg
     1981 gggcgcttcg ccgccctgga ccccgcccgg gatccctacc tggtggagca ccaccaccgc
     2041 ctcaaggccg acgccccctc gggcacggcc aagaccctgg cggcggccct cctggcgggc
     2101 tgcccccgca agacggaatg gaccctcggc accccggcgc cccaccagct cagcgtgggc
     2161 gtggtgcggg ccggcgccga attcggcacc cacaccgtgg gcctcgatgc ccccgccgag
     2221 gtgctggagc tgacacacac ggcgcggtcc cgggccccct tcgcccaggg cgccctggtg
     2281 gcggcccgct ggctccgcgg ccgcaaaggc gtcttcagca tggacgacct ggccgccgat
     2341 ctgctcgacc ccctctttga ttttggagga agaccatgac cctcgacctg tccggcctcg
     2401 ccgtcgccct ggccacgccc ttcacgccct cgggcgaggt ggacctgccc gccttccgca
     2461 agctcgtgcg ccacgtggtg gcggggggtg tcgacaccct ggtgcccctg ggatccaccg
     2521 gggaggccgc caccatcctc gatgacgaac gcgacgccat catcgccgcc tgcctggagg
     2581 agagcggcgg ccgccccgtg gtggtgggca cgggccacaa cgccacccgc caggccgcgg
     2641 ccctgacgaa gcgggcccag gccctggggg cccagggcgc cctggtggtg acgccctact
     2701 acaacaagcc cacgcccgat ggcctggtgg cgcacttagc ggccgtggcc gacgcggcgc
     2761 ccggcctgcc cctcatcgcc tacaacgtgc caggccggac cgggctgaac ctgacgcccg
     2821 cggcgctgct gcgcctctgg gaaaaccccc aggtggtggc ggtgaaggag agcagcggga
     2881 acctggccca gatcgccgag atcgcccgcc agctccccaa ggggaagctc ctgctgtccg
     2941 gg
//
LOCUS       DASUDT010000341         2875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1982384, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000341 DASUDT010000000
VERSION     DASUDT010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982384"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..568)
                     /locus_tag="VFV26_07045"
     CDS             complement(86..568)
                     /locus_tag="VFV26_07045"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX4845962.1"
                     /translation="MLAMFGFASAVEVAEGMKAPAFEARDQHGALVRLADFQGKSAVV
                     LYFYPKDDTPGCTAQACSLRDGFSALQAAGAVILGVSADTTESHKAFAEKFHLPFSLL
                     ADPDRRIIEAYGVKMPLLGMARRVTILIDRKGTVHKVIRDVRTKDHDQQVLALLKSLS
                     "
     gene            659..1687
                     /locus_tag="VFV26_07050"
     CDS             659..1687
                     /locus_tag="VFV26_07050"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX4845963.1"
                     /translation="MDSVIRMALIPGDGVGPEVMAEAEPLLDWARARGRRLEVLRLPY
                     GADHFLATGETLPEPAFAGLRDGCDAILFGAVGDPRVPDGRHAEEILLRLRQGLDLTV
                     NFRPCRPLSGAGHEGLHLEVFRENTEGPYCLQGSTEPGRAVDMAVHTEPAVRRLLEAA
                     FVRAEARGCALTLAHKANVLKHGHGLWMRMFQDAKAAHPQVPARGMHADILLCGLVQD
                     PLPFGVIAADNYLGDLISDLTAAFAGGMGTAPSLSWAPHHPFRCAALAEPVHGSAPDI
                     AGQGLANPVGMVLSTALLFRHLGWEAEAMAVETAVSGAVADGAKTRDLGGTLGTAEMG
                     RAIRDRLS"
     gene            complement(1846..2499)
                     /gene="lexA"
                     /locus_tag="VFV26_07055"
     CDS             complement(1846..2499)
                     /gene="lexA"
                     /locus_tag="VFV26_07055"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX4845964.1"
                     /translation="MKASDLTKRQQAVLKFIRTFVQDEERSPTLAEIAKGVGSSAVST
                     IHKHVQHLMDKGFLVRSHGKGNNLVVATSPAAEVVPPKVERPDAATAPRIFPFCGDVA
                     AGSPILPESRALPIEVPNSIHRQRDELFVLRVRGESMVDDAILDGDLVVLQRKGEYRN
                     GDRVVALIDRDEVTLKEFRRDAKGVWLIPHNPELQPRCYPPQRIDIQGVLVGVMRSC"
     gene            2692..>2875
                     /locus_tag="VFV26_07060"
     CDS             2692..>2875
                     /locus_tag="VFV26_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845965.1"
                     /translation="MTAATAAPTIPGGAKTRINDFSIQVATVNGSGSQTANTVLLRAI
                     FQMGVFVSGKNLFPSNI"
BASE COUNT          469 a          980 c          918 g          508 t
ORIGIN      
        1 ttgaagaaga ccattcttga acctcttggt aggaaaaagt ttagcccgga attccgcccg
       61 ggctcaattc aaatgcctgt cggcctcagg agagtgattt gagcagggcc agcacctgct
      121 gatcgtggtc cttcgtacgg acatcccgga tgaccttgtg gacggtgccc ttccggtcaa
      181 tgaggatcgt gacccgccgg gccatcccga ggaggggcat cttcacgccg taggcctcga
      241 tgatccgccg gtccggatcc gccaggaggc tgaacggcag gtggaatttc tcggcaaagg
      301 ccttgtggct ctcggtggtg tcggcgctga ccccgaggat gaccgcccca gcggcctgaa
      361 gggcggagaa gccatcccgc aggctgcagg cctgggccgt gcaaccgggc gtatcgtcct
      421 tgggatagaa gtagagcacc accgccgact tcccctggaa atccgccagc cgcaccaggg
      481 ccccatgctg atcgcgggcc tcgaaggcgg gcgccttcat gccctcggcc acctcgacgg
      541 cggacgcgaa tccgaacatc gccagcatcc ccgctgcgct tctccacttc cggtccatgg
      601 tggcctcctg agggggcgag tgtggcacca tcggctggca gggaggaggg cagagatctt
      661 ggacagcgtc atccgcatgg ccctgattcc cggcgatggc gtcgggcccg aggtcatggc
      721 cgaagcggaa cccctcctgg actgggcccg ggcccggggc cgccgcctgg aggtcctgcg
      781 cctcccctac ggggccgatc acttcctggc caccggcgag actcttcccg agccggcctt
      841 cgcgggcctc cgggacggat gcgatgccat cctcttcggc gccgtggggg acccccgggt
      901 gccggacggg cgccacgcgg aggagatcct cctgcgcctc cggcagggcc tcgacctcac
      961 cgtgaacttc cgcccctgcc gccccctctc cggcgcgggg catgagggcc tccacctcga
     1021 agtcttccgg gaaaacaccg aaggccccta ttgcctccag ggctcgacgg aacccggccg
     1081 cgccgtggac atggccgtgc acacggaacc cgccgtgcgg cgcctgctgg aagccgcctt
     1141 cgtccgcgcc gaagcccggg gctgcgccct gaccctggcc cacaaggcca acgtgctgaa
     1201 acacgggcac gggctctgga tgcggatgtt ccaggacgcg aaggcggccc acccccaggt
     1261 gcccgcccgc ggcatgcacg ccgacatcct gctctgcggg ctggtgcagg acccgctccc
     1321 cttcggcgtg atcgctgccg acaactacct gggcgacctc atcagcgacc tcacggcggc
     1381 cttcgcgggc ggcatgggca cggccccctc cctgagctgg gccccgcacc accccttccg
     1441 ctgtgcggcg ctggcggagc cggtgcacgg ctcggcgccg gacatcgcag gccaggggct
     1501 cgccaatccc gtgggcatgg tcctcagcac cgccctgctc ttccgccacc tgggctggga
     1561 ggcggaggcc atggcggtgg aaacggccgt gtcaggtgcc gtggcggacg gagcgaagac
     1621 gcgggatctc ggtggcaccc tcggaaccgc cgagatgggc cgggccatcc gcgaccggct
     1681 gtcctgaacc tgcattccgc tgtccgggga aagatctttt ggtaagcgga ggcctgcaga
     1741 ggaacggagg aaagcggagg acaaaatgaa tttcttttct ctgctttcct cagtccctca
     1801 gcgatcctcc gcttatctca tcttttccag gaaagcgctc gaccgtcagc agctacgcat
     1861 gaccccgacg agaactccct ggatgtcgat gcgctggggg ggatagcagc ggggctggag
     1921 ctcgggattg tgggggatca gccacacgcc cttcgcatcc cggcggaact ccttgagggt
     1981 gacctcatcg cggtcgatga gggccaccac gcgatcgccg ttgcggtatt cgcccttgcg
     2041 ctgaaggacc accaggtcgc cgtcgagaat ggcgtcgtcc accatggatt cgccccggac
     2101 tcgcagcacg aagagttcgt cgcgctgccg gtggatgctg ttgggcacct cgatgggcag
     2161 ggcgcggctc tccggaagaa tgggcgagcc cgccgccaca tccccgcaga aggggaagat
     2221 ccgcggcgca gtggcggcat caggccgttc taccttcggt ggcaccactt cggcggctgg
     2281 gctcgtggca accaccaggt tgttcccctt gccgtggctg cggaccagga agcccttgtc
     2341 catgaggtgc tgcacatgct tgtggatggt cgacaccgcg ctggaaccca cccccttggc
     2401 gatttccgcc agggtggggc tgcgctcctc gtcctgcacg aaggtgcgga tgaacttcag
     2461 gactgcctgc tggcgtttgg tgagatcact ggctttcatg agttccaagg taggagccga
     2521 tgagagggtc gtcaatccct tttttttcgc tttatttcag attcccaaag acactctttt
     2581 caacaccttt cccgccggcc cctggcaccc tctgccatac tgagtcatgg cgttgcagag
     2641 ccagcattta cgccctcttc gtcaccattg ccccgtcgcg aaaggagtcc catgactgcc
     2701 gccacagctg cgcctacgat ccccggagga gcgaaaaccc ggatcaatga tttttccatt
     2761 caggtggcca cggtcaacgg atcgggttcc cagaccgcga acaccgtcct gttgcgcgcc
     2821 atcttccaga tgggcgtctt cgtcagcggc aagaacctct tcccttcgaa catcg
//
LOCUS       DASUDT010000342         4867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_723243, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000342 DASUDT010000000
VERSION     DASUDT010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4867
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723243"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..849)
                     /locus_tag="VFV26_07065"
     CDS             complement(169..849)
                     /locus_tag="VFV26_07065"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX4845966.1"
                     /translation="MIRAVVFDLWNTLVFSPAGSPFQRLKGLLRPEQEPLHAALMRDG
                     MIRPYASVEVFLEAWRGPAGLDPGQMDAMAQAFREAGDQAQCFPGAPEAVGAVRDLAR
                     VALLSNTQSFGLELLDRLGISERIRLQHRSADLGALKPEAEAYEAVQRRLGLFPGNLA
                     MVGDSWTDDVEGALAVGWTAIWVNREGRPRPDHDPDAPLYEVRSLDRVPELIENLQAG
                     MRCPTCLG"
     gene            complement(1115..1594)
                     /locus_tag="VFV26_07070"
     CDS             complement(1115..1594)
                     /locus_tag="VFV26_07070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845967.1"
                     /translation="MVAFLSLGCEAINPALRYQEAARQLRFSLDRVEPHVELAFPLEQ
                     SRLRLRLEVGVDNATDQRLRTRRVRGDLRLAAQGGDHALGSVSFPEGADLAPRSRSTL
                     KVDVTLGYGDLKTAWGPLSGAVLRREPATWSLNGEARFEVMGIEFGVPFRTSKSSNR"
     gene            complement(1711..2058)
                     /gene="queD"
                     /locus_tag="VFV26_07075"
     CDS             complement(1711..2058)
                     /gene="queD"
                     /locus_tag="VFV26_07075"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEX4845968.1"
                     /translation="MILRKEYWFEAAHFIYNHPGKCRNLHGHSYKLFVLLEGSVNPET
                     GMIIDFDDLSKVVVEKVIAKLDHRFLNDLIPLSTAENISVWIWEQLKPALPQLCQIEV
                     YETTDNCVIYRGA"
     gene            complement(2127..4850)
                     /locus_tag="VFV26_07080"
     CDS             complement(2127..4850)
                     /locus_tag="VFV26_07080"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEX4845969.1"
                     /translation="MRMSSVGGILLLSASLWAQLPQGLDLQALRQAAAAAGAQGGGPG
                     DVVPSRPVTAAPVALNLEEAARQRSEDEKTDEEIQALKRREKGPRRFAADLFLVRQRG
                     TAATEGGIAEDYVLGTGDRLNLNVFGSATFDLPVQVDGRGEIVIPKVGTAKVGGLTLG
                     RAKAVVQGLVGRNFSRSSVDLQVIKLREVRVFVMGEVYKPGSYLVSSLSSLVNVLSLA
                     GGPTSVGSYRDIRVMRGGQKVFGLDLYPLRAEGLGNPNVALQSGDTVFVPLAQNQVML
                     EGAFQRVVSIPGESADREMDPLKAQRDRLQREIKAIESQLARGSETPSGDPAAGGAGQ
                     GPGAPSLTERAQMEDRLLVLKRQLGRLKETPAGDHRVQINPETGFPVAGEDVDGLRPE
                     WLDRWEQTGVAPAMQFELKAGETAGEALRFAGGFTPEAGPGTLTLRRRGADGTLSGQD
                     VPLDAAPRFALQRGDVLSALPRRERTGPVIQIAGWVRVPGAFARMEGLRVGDLLRRDS
                     QVLPDTYRARGEVVRTALDGTTRFLAFDVDRALAGDAAHNLLLEDRDRIELFRLDALR
                     LPRLVTVMGPVARPGTYSFHEGMRASDLLFRAGVPEKSADRLVAELARSRDGKPSEVI
                     RLDLAKLLSTEAASPIALLDDVVNPRIQADDQLSLFARPDYKVHRVVRITGQVVRPGA
                     YTLDAEHPRLSEVIKRAGGLTAQAMPQAGIFLRRMSTQDASLQRAAEESGLAGKDPTA
                     KGINEILERLNETKRQPLSGQLLRNPLMHGLLSGSLNRMVVDFGGALQGKEAADLELQ
                     DGDEIIIPRSVEAAYVVGETASPFATYKVAKGMKVSDLLKLAGGTTRNADTSNIRLLK
                     ADGRILDSWVEGKAVEPGDTVLVPQRFRRDTSWQENLQALTPLALILNAIK"
BASE COUNT          740 a         1758 c         1618 g          751 t
ORIGIN      
        1 ggtggggaca gacagcgcca gcgcctgagt tccactccgg aaaagagcca ccacggagac
       61 acggagatca cggaggactc accgagaggt cacggagaac agagttcttg ctctaggcct
      121 tttctccgtg ttctttctcg gcgccctccg tgcctccgtg gtggatcgtc accccaggca
      181 cgtcggacag cgcatgccgg cctggaggtt ctcgatgagt tcggggacgc ggtccaggct
      241 gcgcacttcg tagagcggcg cgtcggggtc gtggtcgggg cggggccggc cctcccggtt
      301 cacccagatg gcggtccagc ccacggccag ggcgccttcc acatcatcgg tccagctgtc
      361 gcccaccatg gccaggttgc cgggaaacag gcccagccgc cgctgcaccg cctcgtaggc
      421 ctccgcctcg ggcttgaggg cgcccagatc ggcgctgcgg tgctggaggc ggatgcgctc
      481 ggagatgccc aggcgatcca gcagctccag gccgaagctc tgcgtgttgg acagcagcgc
      541 cacccgcgcc aggtcgcgca cggcccccac ggcctccggc gcgccgggga agcactgggc
      601 ctggtccccg gcttcgcgga aggcctgggc catggcgtcc atctggcccg gatccagccc
      661 cgcggggccg cgccaggcct ccaggaacac ttccaccgag gcgtaggggc ggatcatgcc
      721 gtcgcgcatg agcgccgcat gcagcggctc ctgctcgggc cgcagcaggc ccttcagccg
      781 ctggaagggg ctgcccgccg ggctgaagac cagcgtgttc cagaggtcga agacgacggc
      841 gcggatcatg cccagtccct cctcatccca gatcgcattc aaaaccaggg atccaccacg
      901 gagacaccgg ggccacggag ggagcacgga gccctccgtg gccctccctc atgggccggc
      961 cgcaggccgc ttccggcttg gccggaagcc acgggaggcg ccgggccagg atgccccaca
     1021 gagaatccgg acccggcgcc tcccgcgggc ccatgctccg tgtctccgtg gtggagcatt
     1081 caccaatcat ggcgagccgg cgaggcaatc tgtatcaccg attgctcgat ttgctggtgc
     1141 ggaagggcac gccgaactcg atgcccatca cctcgaagcg ggcctcgccg ttcaggctcc
     1201 aggtggcggg ctcgcggcgg agcacggccc cggacagggg gccccaggcg gtcttcaggt
     1261 cgccgtagcc cagggtcaca tccaccttca gggtgctgcg gctccggggc gccaggtccg
     1321 cgccctccgg aaagctcacc gatcccagcg catgatctcc cccctgggcg gccaggcgca
     1381 ggtccccgcg gacgcgccgc gtgcgcaggc gctggtccgt ggcattgtcc acgcccactt
     1441 ccagccgcag ccgcagccgc gactgttcca gcgggaaggc cagctccacg tggggctcca
     1501 cccggtccag ggagaagcgg agctggcggg cggcctcctg gtagcggagg gccggattga
     1561 tggcctcgca ccccaacgag agaaaagcca ccacggagac accgagtaca cagaggaaat
     1621 cacggaaaag aaatttgggt ttcctggttt tcatcgagca ttcctccgtg gttctttctc
     1681 cgtggactcc gcgtctccgt ggtgaatctc tcaggctccg cggtagatca cgcagttgtc
     1741 ggtggtttca tagacctcga tctggcagag ctggggcagc gcgggcttga gctgctccca
     1801 gatccacacg gagatgttct ccgccgtgga cagggggatc aggtcgttga ggaagcggtg
     1861 gtccagcttc gcgatcacct tctccaccac caccttggac aggtcgtcga agtcgatgat
     1921 catgcccgtc tccgggttca ccgacccctc cagcagcacg aacagcttgt agctgtggcc
     1981 gtggaggttc cggcacttcc cgggatggtt gtagatgaaa tgggcggctt cgaaccagta
     2041 ctctttgcgc aggatcatgg cactcacgat gaaaaggccc cgcgctggcg gggccttcca
     2101 ttctacctcc accggcgggc ccgccgctat ttgatggcgt tcaggatcag ggccaggggc
     2161 gtcagggcct ggaggttctc ctgccagctg gtgtcgcggc ggaagcgctg gggcaccagc
     2221 accgtatcgc cgggctccac ggccttgccc tccacccacg aatcgaggat gcggccatcg
     2281 gccttgagca ggcggatgtt cgaggtgtcg gcgttgcggg tggtgccgcc ggcgagcttg
     2341 agcaggtccg acaccttcat gcccttggcc accttgtagg tcgcgaaggg gctcgccgtc
     2401 tcgcccacca cgtaggcggc ctccacggac cgggggatga tgatctcgtc gccatcctga
     2461 agctccaggt cggccgcctc ctttccctgc agggcccccc cgaagtccac caccatgcgg
     2521 ttcaggctgc ccgaaagcag gccgtgcatc aggggattcc tcagcagctg gcccgaaagg
     2581 ggctggcgct tggtttcatt caaccgctcc aggatttcgt tgatgccctt ggccgtcgga
     2641 tccttcccgg ccaggccgga ttcctccgcc gcccgctgga gtgaggcgtc ctgggtgctc
     2701 atgcgccgca ggaagatccc cgcctggggc atggcctgcg ccgtgagccc cccggcccgc
     2761 ttgatcacct ccgaaagccg gggatgctcc gcgtccaggg tgtaggcccc gggccggacc
     2821 acctggcccg tgatccgcac gacccggtgc accttgtagt cgggcctcgc gaacaggctc
     2881 agctggtcgt cggcctggat gcgggggttg accacgtcat ccagcagggc gatggggctg
     2941 gcggcctccg tggacagcag cttcgccaga tccaggcgga tcacctcgct gggcttgccg
     3001 tcccggctgc gggccagctc ggccaccagg cggtccgccg atttctccgg caccccggcc
     3061 cggaagagca ggtccgaagc ccgcatgccc tcgtggaagg agtaggtccc gggccgggcc
     3121 acgggcccca tgaccgtcac caggcggggc aggcgcaagg cgtcgaggcg gaagagttcg
     3181 atgcggtccc ggtcctccag cagcaggttg tgggcggcat cgcccgccag ggcgcggtcc
     3241 acgtcgaagg ccaggaaccg ggtggtgccg tccagggccg tccgcaccac ctcgccccgg
     3301 gcccggtagg tatccggcag cacctgcgaa tcccggcgca gaaggtcccc aacccgcagc
     3361 ccctccatgc gggcgaaagc ccccggcacc cgcacccatc cggcgatctg gatcacgggt
     3421 ccggtgcgct cccggcgggg cagcgccgac agcacgtctc cgcgctggag ggcaaaccgg
     3481 ggcgcggcgt ccaggggcac gtcctggccg ctgagggtcc cgtcagcgcc ccggcggcgc
     3541 agggtcaggg ttcccgggcc cgcctccggc gtgaagcccc cggcgaagcg cagggcctcc
     3601 ccggccgtct cgcccgcctt gagttcgaac tgcatggcgg gggcgacccc cgtctgctcc
     3661 cagcgatcca gccactcggg acggagtcca tccacatcct ccccggccac gggaaacccc
     3721 gtctcaggat tgatctgtac ccggtggtcc cccgcgggcg tctccttcag cctccccagc
     3781 tggcgcttca gcaccaggag ccggtcctcc atctgcgccc gttccgtcag gctgggcgct
     3841 cccggcccct gtccggcgcc cccggcggcg ggatcccccg agggggtctc cgacccgcgg
     3901 gccagctgcg attcgatggc cttgatctcc cgctggagcc ggtcccgctg ggccttcagg
     3961 ggatccatct cccggtccgc cgactccccg ggaatggaca ccacccgttg gaaggcgccc
     4021 tccagcatca cctggttctg ggccagggga acgaacacag tatcgccgct ctggagggcc
     4081 acgttgggat tgcccaggcc ctcggcccgc agcggataga gatcgaggcc aaagaccttc
     4141 tgcccgcccc gcatcacccg gatatcacgg tagctgccca cggaggtggg cccgcccgcc
     4201 aggctgagca cgttcaccag ggagctgagg ctcgacacca ggtagctgcc gggcttgtag
     4261 acctcgccca tgacaaagac ccgcacttcg cggagcttga tcacctgcag gtccaccgag
     4321 gagcgggaga aattgcggcc caccaggccc tgcaccaccg ccttggccct gcccagggtc
     4381 agcccgccca ccttggcggt gcccaccttg ggaatcacga tctcgccgcg gccatcgacc
     4441 tgcaccggca ggtcgaaggt ggcgctgccg aacacgttca ggttcaaccg gtcccccgtg
     4501 cccagcacgt aatcctcggc gatgccgccc tcggtggcgg ccgtgccacg ctggcgcacc
     4561 aggaagaggt ccgcggcaaa gcgacgcggg cccttttcgc ggcgcttcag ggcctggatc
     4621 tcctcatccg tcttctcgtc ctcgctgcgc tggcgggcag cctcttcgag gttcaacgcg
     4681 acgggcgccg ccgtcaccgg cctggacggg accacatctc ctggcccccc cccctgcgcc
     4741 cccgccgcgg ctgccgcctg cctgagggcc tggaggtcca gcccctgggg cagctgcgcc
     4801 cagagggatg ccgacagcag caggatcccg ccaacagatg acattcgcat gaagactcca
     4861 aagggcc
//
LOCUS       DASUDT010000343         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_303339, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000343 DASUDT010000000
VERSION     DASUDT010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303339"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..875
                     /locus_tag="VFV26_07085"
     CDS             99..875
                     /locus_tag="VFV26_07085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4845970.1"
                     /translation="MVLTFIDKTGASVLSALDTAGDFATLAGRTFATVFKRPFDGKNL
                     LNQLQAVGVHSLPVVILTSLAVSMVFAVQLAFGFRQFQAEGLASQVEGLAIVRELGPV
                     ITGLMLSGRIGSAMAAELGTMQVTEQIDALECLATDPIHYLFVPRFLASMIVVPLLTV
                     VSIYVGFWGGYLILVGVEGQSAYVYGQEFYKLLAFRDLRIALYKALVFGMIIALVGCW
                     KGYRTQGGAEGVGNAPTSSVVTSSLWILISDFFLTKLLLV"
     gene            880..1671
                     /locus_tag="VFV26_07090"
     CDS             880..1671
                     /locus_tag="VFV26_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4845971.1"
                     /translation="MALIDVVNLSKAFGPKVVLSNVNLQVQEGESLVVLGGSGTGKTV
                     LLRNIMGLLTPDSGHVAIEGKIIAQLSREELFKVRQSIGMCFQMAALFDSMTVFENVA
                     FGLRRHQKMTEGEIQGRVEECLSMVGMKGTDKLKPAELSGGMKRRVGFARAIALKPKI
                     LLFDEPTTGLDPVMTDVIGRVILDLKHELGITTITITHDLKSAFEIADRIALIFRGEC
                     IACEPPADFKVNPHPVIQQFLRGDADGPFLQDPPPPKRKSQEAHA"
     gene            1668..>2415
                     /locus_tag="VFV26_07095"
     CDS             1668..>2415
                     /locus_tag="VFV26_07095"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX4845972.1"
                     /translation="MKPETKVGIFFTGAIFLLAVLVFRSEKLEIGGKKNQSERFTFFD
                     TVAGLNVQSAVRIAGVKVGDVRAITLENGKARVVVGLSNDVPLYADAFVSLGSIGILG
                     EKFIDLDAGHSAKGPFPEGRPLPSKAGVSLDNLMETLADIGKNVKGVTQALNESIGGE
                     QGRQKLDEIVDNIRVLTAEFRTMAQENHGAINATLANTEAITTEIKDRLPRLAQQFED
                     LGRNLNGLVAENRPELKGVMGDVRKLASSFQ"
BASE COUNT          437 a          821 c          738 g          419 t
ORIGIN      
        1 gacggcccag acggaaaaag aaggcggcgc atcaaaactc cgtgcccggc agaagaaggg
       61 ctgactcggg taagctagtt ttttgccccc ggagccccat ggttctgacc ttcatcgaca
      121 agaccggtgc cagcgtcctc agtgcgctcg ataccgcagg ggacttcgcc accttggcgg
      181 gccggacctt cgcgaccgta ttcaagcggc ccttcgacgg caagaacctt ctgaaccagc
      241 tccaggccgt gggcgtccac tcgctgccgg tggtgatcct caccagcctt gccgtgagca
      301 tggtcttcgc cgtgcagctg gccttcggct tccgccagtt ccaggccgag ggcctggctt
      361 cccaggtgga gggcctggcc atcgtccgcg agttgggtcc ggtgatcacg gggctgatgc
      421 tctcggggcg catcggatcc gccatggccg ccgagctggg caccatgcag gtgaccgaac
      481 agatcgacgc cctcgaatgc ctggccaccg atccgatcca ctacctcttc gtgccgcgct
      541 tcctcgcctc gatgatcgtg gtccccctcc tcacagtggt ctccatctac gtgggcttct
      601 ggggcgggta cctgatcctg gtgggcgtgg agggccagag cgcctacgtc tacggccagg
      661 agttctacaa gctgctggcc ttccgggatc tccgcatcgc cctctacaag gccctggtct
      721 tcgggatgat catcgccctg gtgggctgct ggaagggcta tcgcacccag ggcggcgctg
      781 aaggcgtggg caacgccccg accagcagcg tggtgaccag ctcgctgtgg atcctcatct
      841 ccgacttttt cctgaccaag ctcctgctgg tgtgacgaca tggccctgat cgatgtcgtc
      901 aacctctcca aggccttcgg tccgaaggtc gtgctgtcca acgtgaacct ccaggtccag
      961 gagggcgaaa gcctcgtggt gctcggcggg tccggcaccg gcaagactgt gctgctccgc
     1021 aacatcatgg gcctgctcac cccggattcg ggccatgtgg ccatcgaggg caagatcatc
     1081 gcccagctat cgcgggaaga actcttcaag gtccgccaga gcatcggcat gtgcttccag
     1141 atggccgccc tcttcgattc catgacggtg ttcgagaatg tggccttcgg cctccggcgg
     1201 caccagaaga tgaccgaggg ggagatccag ggtcgggtgg aggaatgcct ctccatggtg
     1261 ggcatgaagg gcaccgacaa gctgaaaccg gcggagctct ccgggggcat gaagcggcgc
     1321 gtgggtttcg cccgcgccat cgccctgaag cccaagatcc tgctcttcga tgagcccacc
     1381 acgggcctcg atccggtcat gaccgacgtc atcgggcgcg tgatcctcga cctcaagcat
     1441 gagctgggca tcaccaccat caccatcacc cacgacctca agtccgcctt cgagatcgcc
     1501 gaccgcatcg ccctcatctt ccgcggcgag tgcatcgcct gcgaacctcc cgcggatttc
     1561 aaggtcaatc cccatcccgt catccagcag ttcctgcggg gcgatgcgga cggccccttc
     1621 cttcaggacc cgcccccgcc caagcgcaaa agccaggagg cccacgcatg aagcccgaaa
     1681 ccaaggtcgg catcttcttc accggcgcga tcttcctgct ggccgtgctg gttttccgct
     1741 ccgagaagct ggaaatcggc ggcaagaaga accagtccga acggttcacc ttcttcgaca
     1801 cggtggctgg gctgaatgtc cagagcgccg tgcgcatcgc cggcgtgaaa gtgggcgacg
     1861 tgcgcgccat caccctcgag aacggcaagg cccgcgtggt ggtcggcctg tccaacgatg
     1921 tgcccctcta cgccgatgcc ttcgtctcgc tgggatccat cggcattctg ggtgagaagt
     1981 tcatcgacct cgatgcggga catagcgcca agggcccctt ccccgaaggc aggcccctgc
     2041 ccagcaaggc cggagtcagc ctggacaacc tcatggagac cctggccgac atcggcaaga
     2101 acgtgaaggg cgtcacccag gccctgaacg aatccatcgg cggggagcag ggccgccaga
     2161 agctcgatga gatcgtggac aacatccgcg tgctcaccgc cgagttccgc accatggccc
     2221 aggagaacca cggggccatc aacgccacct tggccaacac ggaggccatc accaccgaga
     2281 tcaaggaccg cctgccgcgg ctcgcccagc agttcgagga cctgggccgc aacctgaacg
     2341 gcctggtcgc cgagaaccgg cccgaactga agggcgtcat gggcgacgtc cgcaagctcg
     2401 cgagcagctt ccagt
//
LOCUS       DASUDT010000344         4581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1893921, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000344 DASUDT010000000
VERSION     DASUDT010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893921"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..781)
                     /locus_tag="VFV26_07100"
     CDS             complement(20..781)
                     /locus_tag="VFV26_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEX4845973.1"
                     /translation="MSRSTALPGSTSQAFREELANSLTHGLGTALAIAALVVMVVAAA
                     QRGSARDVVGAAIFGSMLILLYLMSTLYHAFRGPRVKLVFKVFDHSAIFLLIAGTYTP
                     FCLSALGRISPAWGWTVFGLVWGLAVLGITFKAVYYARIARSALRPPPVDHLHTPVVT
                     PVDPAFVRRMGWISTAIYLLMGWLIIIAAGPLGRSLSTHGLYWLFGGGAFYSLGALIY
                     SMRKLPYHHALWHLFVMAASACHVFAVLFHVIPKG"
     gene            829..2481
                     /gene="ggt"
                     /locus_tag="VFV26_07105"
     CDS             829..2481
                     /gene="ggt"
                     /locus_tag="VFV26_07105"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX4845974.1"
                     /translation="MCLRALLLAACLMPAFAQSSRGVVVSQERLASEAGAQVLREGGS
                     AVDAAVATAFALAVVHPAAGNLGGGGFLLSRPTAGQASFIDFRETAPAAAHPRMWLKG
                     DGTYDEALHHHSLASVGVPGTVAGLREAWRREGRLPWARLLRPAIRLARDGFVLTENQ
                     AASLAQQLPTFRKHAATLAQFSRKGGPLQAGDRLVQRDLARTLARLARDWRDFYRGET
                     ARLLVRDMKANGGLITAADLRAYKPLRREPLRGTYRGLELLAAPPPSSGGQVLIQALN
                     ILEGYDLKAAGAGSPRAIHLASEALRRAFANRAQFVGDPAFNAEIPLDRLLSKGYAAE
                     LRATIRLDRASVSAPDRFTWPRDRPDTTHLSVVDGKGNAVSLTYTLEESYGLGRIVPG
                     AGFLLNNELGDFNAVPGLTDATGRIGTAPNLAQPGKRPLSSMCPVILVKEGAVFMVSG
                     SPGGRTIPSTVLNTILQVVDFGQEAQAAVDAPRFHHQWLPDRIQVEAGLPAATREALV
                     ALGHVLKEVPKQGCAQVILVTHGIARGAADTRRWPDSGAVAE"
     gene            complement(2488..>4581)
                     /locus_tag="VFV26_07110"
     CDS             complement(2488..>4581)
                     /locus_tag="VFV26_07110"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4845975.1"
                     /translation="LRALAIQDVKGGSARPLALPPGVALGQPRWSPDGTRFVMTGTVA
                     DATELWVGEAATGKLRRIKDLKLNAVLGDPLDWMADGSLIAKAVPAGQGPAPKAPEVP
                     AGPRIQESEGKAAPAPTYQDLLQNVFDETLFEFLGQSQLVRVDLATGALKALGKPGLY
                     AGVQPSPDGRMLLVARLQRPFSYLVPASQFPVREEVWDRTGALVHVAADLPLAEGIPL
                     EGVRTGPRRLQWRPTEPATLAWVEALDGGDPKQKAEFRDRVLTQAAPFKAEPTELARL
                     KARLMGLEWGERGDLAVVREYERERRWVRTWLLDPAKPGSARLAFDLSSNDRYRDPGS
                     FAQRLLPNGQAALRQQGDALFLTGAGATPTGDRPFLDRFDPRSLKAERIFQAGEGVYE
                     ATTALLPEGRFITRRESPTEAPNYVLHGKETRALTAFKDPLPELRKIRKQLVKYTRPD
                     GVALSFTMYLPPDYQAGERRPAVVWAYPLEFTDAATAGQVSGSTNRFTTIGGMSHLFF
                     LLSGYVVLDGATMPVVGDPKTVNDTFLDQVVASAKAAIDKASELGVIDPKRVGVGGHS
                     YGAFMTANLLAHSNLFRAGIARSGAYNRTLTPFGFQSERRTLWEAPDMYLKVSPFMSA
                     NKFNAPILLIHGEADNNQGTFPIQSERLYMALKGNGQTVRYVTLPHESHGYIARESVE
                     HTLWEMIHWFDKHLK"
BASE COUNT          661 a         1524 c         1729 g          667 t
ORIGIN      
        1 gccgaacaga ctctggagat cagcccttcg ggatcacgtg gaacagcacg gcgaacacgt
       61 ggcaggcgct ggcggccatc acgaagaggt gccagagggc gtggtggtag ggcagcttcc
      121 tcatgctgta gatgagggcg cccaggctgt agaaggcccc gccgccgaag agccagtaga
      181 ggccgtgggt ggacagggag cgtcccaggg gcccggcggc gatgatgatg agccagccca
      241 tgagcaggta gatggccgtg gagatccagc ccatgcgccg gacgaaggcg ggatccacgg
      301 gggtgaccac cggcgtatgc aggtggtcca cggggggcgg gcgcagggcc gaccttgcga
      361 tccgtgcgta gtagacggcc ttgaaggtga tgcccagcac cgccaggccc cagaccaggc
      421 cgaacacggt ccaaccccag gccgggctga tgcggcccag ggccgagagg cagaagggtg
      481 tgtaggtgcc cgcgatgagc aggaagatgg ccgagtggtc gaagaccttg aagaccagct
      541 tcacgcgggg gccgcggaag gcgtggtaca gcgtggacat gaggtacagc aggatcagca
      601 tggagccgaa gatggcggcg cccaccacgt cccgggcgct gccccgctgg gccgcggcga
      661 ccaccatcac caccagggcc gcgatggcca gggccgtgcc caggccatgg gtgaggctgt
      721 tggccagttc ctcgcgaaag gcctgggagg tggagccggg aagggcggtg ctgcgggaca
      781 tggctcaaga atgacagact ctaggacacg tcttcaccgg gagcttccat gtgccttcgt
      841 gccctgctgc tggccgcctg cctcatgccg gccttcgccc aatcgtcccg gggtgtggtg
      901 gtgagccagg agcgcctggc ctccgaggcc ggggcccagg tgctgcgtga agggggttcc
      961 gccgtggatg ccgccgtggc cacggccttt gccctggcgg tagtgcaccc tgccgcgggg
     1021 aacctgggcg ggggcggctt cctgctgtcg agacctaccg cgggtcaggc ctccttcatc
     1081 gacttccggg agacggcccc ggcggcggcc catccccgca tgtggctgaa gggggatgga
     1141 acctacgacg aggccctgca tcaccacagc ctggcctccg tgggcgtgcc gggcaccgtg
     1201 gcgggcttgc gcgaagcctg gcggcgggag ggccggctgc cctgggcgcg gctgctgcgg
     1261 cctgccatcc ggctggcccg cgacggcttt gtcctcacgg agaaccaggc ggccagcctg
     1321 gcgcagcagc tgcccacctt ccgcaaacat gccgccaccc tggcccagtt cagccggaag
     1381 ggcgggcccc ttcaggccgg agaccggctg gtgcagcggg atctggcccg cacgctggcg
     1441 cggctggcca gggactggcg cgacttctac cgcggcgaaa cggcccggct cctcgtccgc
     1501 gacatgaagg cgaacggcgg cctgatcacg gcggcggacc tccgcgccta caagcccctg
     1561 cgccgcgagc ccctgcgggg cacctaccgg ggcctggagc tcctggcggc gccgcccccc
     1621 agctccggcg gccaggtgct gatccaggcc ctgaacatcc tcgaaggcta cgacctgaag
     1681 gccgccgggg ccggatcgcc ccgggccatc cacctggctt cggaggccct gcgtcgcgcc
     1741 ttcgcgaacc gggcccagtt cgtcggggat cccgccttca acgcggagat ccccctcgac
     1801 cggctgctgt cgaagggcta cgcggccgag ctgcgagcca cgatccggct ggaccgcgct
     1861 tcagtctcgg ccccggaccg cttcacctgg cccagggacc gccccgatac cacgcacctg
     1921 tccgtggtcg acgggaaggg caacgccgtg agcctcacct acacgctgga ggagagctat
     1981 ggcctggggc gcatcgtgcc cggggcgggc ttcctgctga acaacgagct gggggatttc
     2041 aacgcggtgc ccggcctgac ggacgccacg ggccgcatcg gcacggcgcc gaacctggcg
     2101 cagcccggga agcggcccct ctccagcatg tgccccgtga tcctcgtgaa ggagggcgcg
     2161 gtgttcatgg tgagcggcag ccccggcggc cgcaccatcc ccagcacggt gctgaacacc
     2221 atcctccagg tggtggactt cggccaggag gcgcaggccg cggtggatgc gccccgcttc
     2281 caccaccagt ggctgccgga ccgcatccag gtggaagccg ggctgcccgc cgccacccgc
     2341 gaggcgctgg tggccctggg ccacgtcctc aaggaggtgc cgaagcaggg ctgcgcccag
     2401 gtgatcctcg tgacgcacgg gatcgcccgg ggcgcggcgg acacccggcg ttggccggac
     2461 agcggggcgg tggcggagta ggcgtgccta cttcaggtgc ttgtcgaacc agtggatcat
     2521 ttcccacagg gtgtgctcca cggattcgcg ggcgatgtag ccgtgggact cgtggggcag
     2581 ggtgacgtag cggacggtct ggccgttgcc cttgagggcc atgtagagac gctcgctctg
     2641 gatggggaag gtgccctggt tgttgtccgc ctcgccgtgg atgagcagga tgggcgcgtt
     2701 gaacttgttg gcggacatga agggcgacac cttcaggtac atgtccggcg cctcccacag
     2761 cgtgcggcgc tcgctctgga agccgaaggg cgtcagcgtg cggttgtagg cgccgctgcg
     2821 ggcgatgccg gccctgaaca ggttcgagtg ggccagcagg ttggcggtca tgaaggcgcc
     2881 gtagctgtgg ccgcccacgc ccacccgctt ggggtcgatg acccccagct cgctggcctt
     2941 gtcgatggcg gccttggcgc tggccaccac ctggtcgagg aaggtgtcgt tcacggtctt
     3001 gggatcgccc accacgggca tggtggcgcc gtccagcacc acgtagcccg acagcaggaa
     3061 gaacaggtgg gacatgccgc cgatggtggt gaagcggttc gtggatccgc tcacctggcc
     3121 cgcagtggcc gcgtccgtga actccagggg gtaggcccag accacggcgg ggcggcgctc
     3181 gccggcctgg tagtccggcg gcaggtacat cgtgaagctg agggccacgc cgtcgggccg
     3241 cgtgtacttc accagctgct tccggatctt ccgcagctcg gggaggggat ccttgaaggc
     3301 ggtcagggcc cgggtctcct tcccgtggag cacgtagttc ggcgcttccg tggggctttc
     3361 ccggcgcgtg atgaagcggc cctccggcag cagcgcggtg gtggcctcat agacgccttc
     3421 gccggcctgg aagatccgct cggctttcag gctgcggggg tcgaagcggt ccaggaaggg
     3481 ccggtcgccc gtgggcgtgg ccccggcgcc ggtgaggaag agggcgtccc cctgctggcg
     3541 cagcgccgcc tgcccgttgg gaaggaggcg ctgcgcgaag ctgccgggat cacggtacct
     3601 gtcgttgctg ctgaggtcga aggccaggcg cgcgctgccg ggttttgccg gatccagcag
     3661 ccaggtgcgg acccagcggc gttcccgctc gtattcgcgg accacggcca agtcgccgcg
     3721 ctcgccccat tccaggccca tgagccgggc cttgaggcgg gccagttccg tgggttcggc
     3781 cttgaagggc gcggcctggg tcagcacgcg gtcgcggaac tcggccttct gcttgggatc
     3841 gccgccatcc agggcttcga cccaggcgag ggtggcgggt tccgtgggcc gccactggag
     3901 gcggcggggt cccgtgcgga cgccttcgag ggggatgcct tcggccaggg gcaggtccgc
     3961 ggccacgtgc acgagggcac cggtccggtc ccagacctct tcgcgcacgg ggaactgcga
     4021 cgcgggcacc aggtaggaga aggggcgctg gaggcgggcc accaggagca tccggccatc
     4081 gggcgagggc tgcaccccgg cgtagaggcc cggtttgccg agggccttca gggcgccggt
     4141 ggccaggtcc acgcgcacca gctgggactg gcccaggaac tcgaagaggg tctcgtcgaa
     4201 gacgttctgg agcaggtcct ggtaggtggg cgcgggggcg gccttgcctt cgctctcctg
     4261 gatgcggggg ccggcgggca cctcgggagc cttgggcgcg ggaccctggc ccgcaggcac
     4321 ggccttggcg atcaggctcc cgtccgccat ccagtccagg gggtcgccca gcaccgcgtt
     4381 gagcttcagg tccttgatgc ggcggagttt tccggtggcg gcctcgccca cccacagctc
     4441 cgtggcatcg gcgacggtcc cggtcatcac gaagcgcgtg ccgtccgggg accagcgcgg
     4501 ctggcccagg gccacacccg gcggcagggc gaggggacgg gcggagcctc ccttcacatc
     4561 ctggatggcc agggccctga g
//
LOCUS       DASUDT010000345         5400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_966332, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000345 DASUDT010000000
VERSION     DASUDT010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5400
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966332"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="VFV26_07115"
     CDS             complement(<1..1202)
                     /locus_tag="VFV26_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845976.1"
                     /translation="MKLLRYIAPLLLGTVQLLAVPAWSRLTGTSCNACHATPTMQLTK
                     MGLDFLKNGHRLEATKAEAKDQKWDNYLSFVWKGRAYADKTDVKTTAAVQKPSSQLEL
                     HSFSIYTGGALSDRFSYFTEMYLNENTGSTSGANVVQGDGSRKKLAEAFLQYNQPISN
                     DTFLAIRGGEILPGILHVFGVGARSAEQRALVLNGATVGTNPYKPFNRQQGFDATLVN
                     KHFEVAVGVLNGSANTNALDADNHKDLFASALWNIDGHESALGLFHYNGQFTNYATAN
                     DPSTAITFDNKFNRTGLMARFLRDNWRVVGAYFTGKETFNAAGLDAKNKGYYTLVDYN
                     FSDSFGMFARADYFKPRDDQDADTKQFLVGLNGLFYQTEKSGARWNLEYLSQDLKPVT
                     GANVKSSQL"
     gene            complement(1310..2668)
                     /locus_tag="VFV26_07120"
     CDS             complement(1310..2668)
                     /locus_tag="VFV26_07120"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4845977.1"
                     /translation="MIGAFKRSLLVRLSLGFALTISGLVGASGLFLYSSIEHIVYTQI
                     NRDFINTAKLLLHKLDDDRLPLDKEILDVGEHFAVRVSDLAGEALLETRGMDKKFPPL
                     GAPAAPGDWIWTQGPSTPDHTPRSLRVRYHRGWVQLSRDLKPEETLLREFFRSMLALL
                     AIAPVIGAAFGYWLVKMGLKPLRYLEDEAENLRPENLGIRIDSHRLPTELAPLSQALN
                     HSIARLESAFARLSELNSDVAHELRTPVHSLRLETEHILAGGHLPEAAEEQLAGMMDT
                     LDHMAALIEQMLFLARSEDPAHQVEMQPLDVQNLLDTVQEPFVSLAEESQITVEISTP
                     PGLTLRGNATLLRRALHNLLANAIRHSPPGSTVSIEATSTPEGLTLAVRDRGEGIPKQ
                     FLATLGQRFVRTDASRSRKRGGAGLGLAIVNGIAKLHGAVLRIESEEGVGTVAKITFP
                     VS"
     gene            complement(2665..3339)
                     /locus_tag="VFV26_07125"
     CDS             complement(2665..3339)
                     /locus_tag="VFV26_07125"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4845978.1"
                     /translation="MKLLIVEDDPRAAQALERSLRQHCFLVETAFDGLQGLSMARQET
                     FDCLILDVMLPGMDGFTLVAELRTAGIDTPVIFLTARDALPDRIRGLEVGGGDYLVKP
                     FAFSELLLRINNLLQRGGETLTKDLIIGDLSIHRAQRKVYRSGKRLDLSNQEYALLDL
                     LARNRGNVVTRTRIAEELWELAFDGDSNLVDAAVRRLRKKVEDPFEGKLIHTRRGVGY
                     ILECPL"
     gene            complement(3388..4008)
                     /locus_tag="VFV26_07130"
     CDS             complement(3388..4008)
                     /locus_tag="VFV26_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4845979.1"
                     /translation="MASTLRDLLIQRAARLQGRPALTAPGWGTLSHAQLRNRAEGVAL
                     GLLAAPPPPLVFCATGTPWDWAAELAAAATGLVWDAAGQQVPPEILGGPRFNAEAGRG
                     AYHACEQTVTEATTFSPGLTQGDLMARLRRLNTALGWDHDTRVALPLARLGEPALRGA
                     LWSLLFAGGHAVLEAETPAAAPGLLARFRKAPLPAWNPEAFLGLWR"
     gene            4143..>5400
                     /locus_tag="VFV26_07135"
     CDS             4143..>5400
                     /locus_tag="VFV26_07135"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX4845980.1"
                     /translation="MRSTLRTLTVLALPLGLTALALGLACGGSSPTSSTPSTSRAMGT
                     ASVILTDAPSDQWSAIEVVVTKVVFLNKADHTREEVAFQGASARINLVDLDSVGELLA
                     SAQIPVGTYDAVRITIDPASVNLVKADGTSVPSGQVHVLGSSVLVGLSADLVVTASSS
                     NAVQLDFDLAHPLFLVQLPDGTWAMNLQVRHRPMANGMAGLAQMLFRHRKGTVASVGA
                     SSFVLHTDSGNDLTVNVDPGSWFFDADARTPGSLAGLAAGKHALVSLRMQPDGSLWAV
                     RVWYGAAALPGWTPEGHIYGVDRTANKLIVSASNGAPRAIFIDADTAFTFRALQDLGT
                     GPGALANLWTGFKVQVEVKDPLQAQLHARSVNVQRAVDGGRISSASTSSFTYQHASGD
                     RTHAYASGFAWWYVGFPGQTSTSLTDF"
BASE COUNT          812 a         1699 c         1961 g          928 t
ORIGIN      
        1 agctggctgc tcttgacgtt tgccccggtg accggcttca ggtcctggct caggtattcc
       61 aggttccagc gggcaccgct cttctcggtc tggtagaaca ggccgttcag gcccaccagg
      121 aactgcttgg tgtcggcgtc ctggtcgtcg cggggcttga agtagtcggc gcgggcgaac
      181 atgccgaagg aatcgctgaa gttgtagtcc accagggtgt agtagccctt gttcttggca
      241 tcgagaccgg ccgcgttgaa ggtctccttg ccggtgaagt aggcacccac cacgcgccag
      301 ttgtcgcgga ggaagcgggc catgaggccg gtgcgattga acttgttgtc gaaggtgatg
      361 gcggtgctgg gatcgttcgc ggtggcgtag ttggtgaact ggccgttgta gtggaacagg
      421 cccagggcgc tctcgtggcc gtcgatgttc cacagggcgc tggcgaacag gtccttgtgg
      481 ttgtcggcat cgagggcgtt ggtgttggcg ctgccgttca gcacgcccac ggccacttcg
      541 aagtgcttgt tcaccagggt ggcgtcgaag ccctgctggc ggttgaacgg cttgtagggg
      601 ttggtgccca cggtggcgcc gttcagcacc agcgcgcgct gttcggcgga gcgggcgccc
      661 acgccgaaga catgcaggat gccggggagg atttcgccgc cgcggatcgc gaggaaggtg
      721 tcattgctga tgggctggtt gtactggagg aaggcctcgg ccagcttctt gcgggagccg
      781 tcgccctgga ccacgttggc gccgctggtg gagccggtgt tctcgttcag gtacatctcg
      841 gtgaagtagg agaagcggtc cgacagggcg ccgccggtgt agatggagaa gctgtggagt
      901 tccagctggc tcgagggctt ctgcacggcg gcggtggtct tcacgtcggt cttgtcagcg
      961 taggcgcggc ccttccagac gaaggacagg tagttgtccc acttctggtc cttggcctcg
     1021 gccttggtgg cttcaaggcg atggccgttc ttcaggaagt ccaggcccat cttggtgagc
     1081 tgcatggtcg gggtggcgtg gcaggcgttg cagctggtgc cggtcagacg gctccaggcc
     1141 gggacggcca gcagctggac ggtgcccagc agcagggggg cgatgtagcg aagcaatttc
     1201 atgggaaacc tccagcgcgg tcggcgcatt atggtcgagt cgatctttga cccatgggta
     1261 agctaagcgg attgcctgat ccctggatga cacgaacctg attgtttggt caggaaacag
     1321 ggaatgtgat cttcgccact gtgcccacgc cctcttcgct ctcgatgcgg aggacggcgc
     1381 cgtggagctt ggcgatgcca ttcacgatgg ccaatcccag ccccgcgccc ccgcgcttcc
     1441 ggctgcgcga ggcgtccgtg cgcacgaagc gctggcccag ggtcgcgagg aactgcttgg
     1501 gaatgccttc gccccggtcc ctcacggcca gggtcaggcc ctccggcgtc gaagtcgcct
     1561 cgatggatac ggtgcttccc ggcggcgaat ggcggatggc attggccagc aggttgtgga
     1621 gcgcccgccg gaggagggtg gcatttcccc tcagggtgag cccagggggg gtggagatct
     1681 ccaccgtgat ctggctttcc tccgccaggg acacgaaggg ttcctggacg gtgtccagca
     1741 ggttctgcac atccaggggc tgcatctcca cctggtgggc gggatcctcc gaccgggcca
     1801 ggaagagcat ctgttcgatg agggccgcca tgtggtccag ggtgtccatc atgccggcca
     1861 gctgttcctc cgcagcttcg ggcaggtggc cgccggccag gatgtgctcg gtttccaggc
     1921 ggagggagtg gacgggcgtc cgcagctcgt gggccacgtc gctgttgagc tccgacagcc
     1981 gggcgaaggc ggattccagg cgggcgatgc tgtggttcag ggcctgggag aggggcgcca
     2041 gctcggtggg caggcggtgg gagtcgatgc ggatccccag gttttccgga cggaggttct
     2101 cggcctcgtc ttccaggtag cgcaggggct tgaggcccat tttgacgagc cagtagccga
     2161 aggccgcgcc aatgaccggc gcgatggcca gcagggcgag catggaccgg aagaactccc
     2221 tgagcagggt ttcctcgggc ttgagatcgc gcgagagctg gacccagccc cggtggtagc
     2281 ggacccgcag ggaccgggga gtgtggtccg gagtggaggg cccttgggtc cagatccagt
     2341 ctccgggggc cgcgggcgcg cccagaggcg ggaacttctt gtccatgccc cgggtctcca
     2401 ggagggcctc gcccgcgagg tccgacacac ggacggcgaa gtgttcgccg acatccagga
     2461 tctccttgtc caggggcagg cggtcatcgt ccagcttgtg cagcaggagc ttggcggtgt
     2521 tgatgaagtc ccggttgatc tgggtataga cgatgtgctc gatggaggaa tagaggaaga
     2581 gccccgaggc gcctacgagc cccgagatgg tgagcgcgaa ccccagggac agccggacca
     2641 gcagggaccg cttgaatgcg ccgatcacag ggggcattcg aggatgtagc ccaccccccg
     2701 gcgggtgtgg atgagcttgc cctcgaaggg atcctccact tttttcctca ggcgccggac
     2761 cgcggcatcc accaggttgg aatcgccgtc gaaggccagt tcccagagct cctcggcaat
     2821 gcgggtgcgg gtgacgacgt tgccccggtt ccgggccagc aggtcgagaa gggcgtactc
     2881 ctggttgctg aggtccagtc gcttgccgct ccggtagacc ttccgctggg cgcggtggat
     2941 ggacaggtcg ccgatgatga ggtccttggt gagcgtttcg cccccccgct gcaggaggtt
     3001 gttgatccgg agcagcagct cggaaaaggc gaagggcttg acgaggtagt ccccgccccc
     3061 cacctccagc ccccggatcc ggtccggcag ggcgtcccgg gccgtgagga agatgaccgg
     3121 ggtgtcgatg cctgcggtgc ggagttcggc caccagggtg aatccgtcca tgccgggcag
     3181 catcacatcc aggatgaggc agtcgaaggt ctcctgccgg gccatggaca gcccctgaag
     3241 gccgtcgaag gccgtttcca ccaggaagca gtgctggcgc aggctgcgct ccagggcctg
     3301 ggccgcccgg gggtcatctt cgacgatcag cagtttcatt gtgatttccc atattccttg
     3361 gccagattag cagcccactg ggcgggatca gcgccagagg cccaggaacg cctcggggtt
     3421 ccaggcgggg agtggggcct tgcggaaccg cgccaggagt cccggggcgg cggccggcgt
     3481 ctcggcttcc agcacggcgt ggcctccggc gaagaggagg ctccagaggg cgccgcgaag
     3541 ggcgggctcg cccaggcggg ccaggggaag cgccacgcgg gtgtcgtggt cccagccgag
     3601 ggccgtgttc aggcgccgca gcctggccat caggtcgccc tgggtgagtc cggggctgaa
     3661 ggtggtggcc tccgtcacgg tctgctcgca ggcgtggtag gccccgcgcc ccgcttccgc
     3721 gttgaagcgg gggccgccca ggatctccgg gggcacctgc tgtcctgcag cgtcccagac
     3781 caggccggtg gccgcggcgg ccagctcggc ggcccaatcc cagggcgtgc cggtggcaca
     3841 gaacaccagg ggcgggggtg gggctgccag caggcccagg gccacgccct cggcgcggtt
     3901 gcggagctgg gcatggctga gggtccccca gccgggggcc gtcagggccg ggcggccctg
     3961 gaggcgggcg gcgcgctgga tgaggaggtc ccgcagggtg gaggccatgg aggaagtgtc
     4021 gcaagtcgca ggcccggcct gcaaaatgaa accggccgtc aaccttttcc cgggtggagg
     4081 gtcagaggag tgtccgcgct tccctcccat ctggagcccc gctccgttct ctggagatcc
     4141 ccatgcgttc caccctgcgc accctcaccg tgctggcgct gcccctgggc ctcacggccc
     4201 tggccctcgg cctggcctgc ggcggaagct cccccaccag ttccaccccc tcgacgtcca
     4261 gggccatggg cacggcctcg gtcatcctca cggatgcgcc gtccgaccag tggtccgcca
     4321 tcgaggtggt ggtgacgaag gtggtcttcc tgaacaaggc ggatcacacg cgggaggagg
     4381 tggccttcca gggcgccagc gccaggatca acctggtgga tctggacagc gtgggcgagc
     4441 tgctggcctc ggcccagatc cccgtgggca cctacgatgc tgtgcgcatc accatcgacc
     4501 ccgccagcgt caaccttgtg aaggccgatg ggacctccgt gcccagcggc caggtccacg
     4561 tactgggctc gagcgtgctg gtggggctga gcgccgatct ggtggtgacg gccagcagca
     4621 gcaacgccgt gcagctggat ttcgacctgg cccatcccct cttcctggtg cagctgcccg
     4681 atggcacctg ggccatgaac ctgcaggtga ggcaccggcc catggcgaac ggcatggcgg
     4741 gcctggccca gatgctgttc cgccaccgca agggcaccgt ggcctccgtg ggcgcctcca
     4801 gcttcgtgct ccacaccgac agcggcaacg acctcacggt gaacgtggat ccgggcagct
     4861 ggttcttcga cgcggatgcc cggacgccgg gcagcctcgc gggcctggcg gccggcaagc
     4921 acgcgctggt ctccctgcgg atgcagccgg acggcagcct ctgggctgtg cgggtgtggt
     4981 acggcgccgc ggccctgccg ggctggacgc cggaaggcca catctacggc gtggaccgca
     5041 ccgcgaacaa gctcatcgtc agcgccagca acggcgcccc ccgggccatc ttcattgatg
     5101 cggacaccgc cttcaccttc cgtgccctgc aggacctcgg caccgggccg ggcgccctgg
     5161 cgaacctgtg gaccggcttc aaggtccagg tcgaagtcaa ggaccccctc caggcccagc
     5221 tccacgccag gtcggtgaac gtgcagcgcg ccgtggacgg cggccggatc agctcggcct
     5281 ccacgagctc cttcacctac cagcacgcca gtggtgaccg gacccacgcc tatgccagcg
     5341 gcttcgcctg gtggtatgtg ggcttccccg gccagacctc cacgagcctg acggatttcg
//
LOCUS       DASUDT010000346         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1143209, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000346 DASUDT010000000
VERSION     DASUDT010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143209"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(259..1518)
                     /locus_tag="VFV26_07140"
     CDS             complement(259..1518)
                     /locus_tag="VFV26_07140"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX4845981.1"
                     /translation="MILRGLLASLLALSLGAQDRPLVLKAARLLDVRTGKMVSPGQVW
                     VKGGRIQAGTPPAEAQVLDLGDRTLLPGLIDTHTHLLFRAGLGELGHLKRSHAAQVLD
                     GVVSARKVLEAGFTTVRDVGSSSEFGDVALRDAIARGDIPGPRMLVGGPSLSITGGHG
                     DLNGFPPHLHSEDEHIVDSPDRARHVVREWRKRGVDLIKLHATGGVLSNHDDPGAPSF
                     SPPEFKAIVEEANRRGMDVCAHAHGDAGIREATLAGVRSIEHGSLLSPATAMEMKARG
                     TFLVPTLYALESILLPGNPYHFPEGSLAKARAILPQRRAGFRVALEAGLPIAYGTDIG
                     VFEHGQVAMDFRYLVSYGMTPLQAIQSATVVASRLLRLEAEIGTLEAGHAADIIAVEG
                     DPLKDITTLERVAFVLQEGRVVRRPAR"
     gene            complement(1575..>2637)
                     /gene="der"
                     /locus_tag="VFV26_07145"
     CDS             complement(1575..>2637)
                     /gene="der"
                     /locus_tag="VFV26_07145"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX4845982.1"
                     /translation="RTPEEAEIHSLSDELRFALIGRPNVGKSSLTNRMLGYERSLVSE
                     VAGTTRDTVDTVFTVKDTVYRMIDTAGIRKKGKTHEGAEKLSILKAKQAMARADVSLL
                     LLDAVEGATHQDAVIAGYAQEAGAAVILVVNKWDLVEKDTHTIYSAEEDLRRSLGFLH
                     HAPMIFLSALTGQRVSKLFGMIDELAEAHKRRIPTGELNRFLRETVSAMSPHAIDGKL
                     PKLYFMTQVGIRPPSFVVKANTDRGLHFSYVRYMENRLREQFGLAGVPLRLSVQKKKA
                     GEGEEPEVAAVRRILDPGEGLKPSRSNESLQAQRVDKVKARPRPKKKEGPKPAAKQAP
                     KKGKGAPPKRVRQKSTKKL"
BASE COUNT          386 a          808 c          960 g          483 t
ORIGIN      
        1 aaaggtgggg gggggagggc agggcgcagc cggcacggcc catccggcca tgacggcgcc
       61 cacctcggaa accggggcgg ggcgcgcaat ctggggagaa agaacgggaa gtcgggtatc
      121 agagtccccg tccgctgttg ccttcctcaa gttaagggtt gttaattttc atgagaatca
      181 gttctagttg atttaatttt gcataacttt ttttattgca attcttaata atcaatttag
      241 aggtcgtgat taaagctttt atctggcagg gcgccggacc acgcggccct cctggagcac
      301 gaaggcgacg cgttccaggg tggtgatgtc cttcagcgga tcgccttcca cggcgatgat
      361 gtccgccgcg tggcccgcct ccagcgtgcc gatctccgcc tccagccgca gcagccgaga
      421 ggcaaccaca gtggcgctct ggatggcctg gaggggcgtc atgccgtagc tcaccaggta
      481 gcggaaatcc atggccacct ggccgtgctc gaagacgccg atgtccgtgc cgtaggcgat
      541 ggggaggccc gcctccaggg ccacccggaa ccccgcccgg cgctggggca ggatggcgcg
      601 ggccttggcc agggagccct cggggaagtg gtaggggttg cccggcagca ggatggattc
      661 gagggcgtac agggtgggca ccaggaaggt gccgcgggcc ttcatctcca tggccgtggc
      721 ggggctgagc aggctgccgt gctcgatgga ccgcacgccc gccagggtgg cctcgcggat
      781 gcccgcgtca ccgtgggcgt gggcgcagac gtccatgccg cggcggttcg cctcctccac
      841 gatggccttg aattcgggag ggctgaagct gggggcgccg gggtcgtcat ggttggagag
      901 gacgccgccg gtcgcgtgga gcttgatgag gtccaccccg cgcttgcgcc attcgcggac
      961 gacatgccgg gcccgatcgg gcgaatccac gatgtgttca tcttcggaat ggaggtgggg
     1021 cgggaagccg ttgaggtcgc catggccgcc ggtgatggac agcgagggcc cgcccaccag
     1081 catccgaggc ccggggatgt cgccccgcgc gatggcgtcc cttagggcca catccccgaa
     1141 ctcggaggag gaacccacgt cgcgcacggt ggtgaagccg gcctccagca ccttccgggc
     1201 gctcaccacc ccgtccagga cctgggcggc atggcttcgc ttgaggtggc ccagttcgcc
     1261 cagtccggcg cggaagagca ggtgggtgtg ggtgtcgatg aggcctggca gcagggtccg
     1321 gtcgccaagg tcgagaacct gggcctccgc gggcggggtc cccgcctgga tgcgcccacc
     1381 cttcacccac acctggccgg gactgaccat cttcccggtg cggacatcca ggaggcgggc
     1441 ggccttgagg acgagcgggc gatcctgggc gccgagggaa agggcgagaa ggctggcgag
     1501 gaggccgcgc aggatcatgg aagctccgga gtgtggccta cgatagccca tccgttctat
     1561 ggcttcgagg attcctaaag cttcttggtg gacttctgcc ggacccgttt gggcggcgcg
     1621 cccttgccct tcttgggggc ctgcttggcg gcgggtttgg ggccttcctt cttcttgggg
     1681 cggggcctgg ccttgacctt gtctacccgc tgggcctgga gggattcgtt gctgcgggag
     1741 ggcttgaggc cttcgccggg atccaggatg cggcggacgg cggccacttc cggttcctcg
     1801 ccttcgcccg ccttcttctt ctggacgctg aggcgcaggg gcacgcccgc caggccgaac
     1861 tgctcgcgca ggcggttctc catgtagcgc acgtagctga agtgcagccc gcggtccgtg
     1921 ttggccttca ccacgaagct ggggggccga atgcccacct gggtcatgaa gtagagcttg
     1981 ggcagcttgc cgtcgatggc gtgggggctc atggcgctca cggtctcgcg caggaaccgg
     2041 ttcagttcgc ccgtggggat gcggcgcttg tgggcctcgg ccagctcgtc gatcatgccg
     2101 aacagtttcg acacccgctg tccggtcagg gccgagagga agatcatggg cgcgtggtgg
     2161 aggaagccca ggctgcggcg caggtcctct tcggcgctgt agatggtgtg ggtgtccttc
     2221 tcgacgaggt cccacttgtt caccacgagg atgacggcgg cgccggcctc ctgggcatag
     2281 ccggcgatga cggcgtcctg gtgggtggcg ccttcgacgg cgtccagcag cagcaggctc
     2341 acatcggccc gggccatggc ctgcttggcc ttcaggatgc tgagcttttc cgcgccctcg
     2401 tgggtcttgc ccttcttgcg gatgccggcg gtgtcgatca tccggtagac cgtgtccttc
     2461 acggtgaaga ccgtgtccac cgtgtcgcgg gtggtgcccg ccacttcgct gacaaggctg
     2521 cgctcatagc ccagcatgcg gttcgtgagc gaggacttgc ccacattggg gcggccgatg
     2581 agggcgaagc gcagctcgtc cgagagcgag tggatctcgg cctcctcggg cgtgcgg
//
LOCUS       DASUDT010000347         4292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1739879, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000347 DASUDT010000000
VERSION     DASUDT010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1739879"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2054
                     /locus_tag="VFV26_07150"
     CDS             <1..2054
                     /locus_tag="VFV26_07150"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX4845983.1"
                     /translation="PTLVKAALNALDGDIGPSREDLCHWYELMHLGRLLDDKAPNYLK
                     QAIGWSYHAPCAGHDGIQLAAGLSFRAGRDFLFPYYRDLMTCLAAGLTPEEIILNGIS
                     KATDPASGGRHMSNHFGKPSIGIQNVSSLTGNHTQHAVGLARAVKTYGRDSIVFSSQG
                     ESSLSEGYCFESINGADKEQLPVVFVIQDNGYGISVPKRDQSANAHICDNFSGFTNLK
                     IIKCDGLDFPDSLRAMEEALAYVRTGKGPAMVYASCVRIGSHSNSDRHELYRDEAERA
                     EAKAKDPLPRFRAYCLEHGLSEDELGAIESENQARYLAAHDRAMAAPSPDAASIHDFV
                     IPEGWVSGQFPDGTHQATGETISFITALNQTLKEEFRHNPDTFIWGQDMANKEKGGIF
                     NVSKGLQQEFGGKRVFNAPIAEDFIVGTANGFSRLDDKIRVVVEGAEFADYIWPAAEQ
                     IVECSHDYWRSNGQFAPNITVRLASGGYIGGGLYHSQNVEGWLTTLPGIRVVVPAFAD
                     DAAGLLRTALRSRGTTLYLEPKFLYNAKMAHAVVPPDFAVPFGKARVRREGTELTILA
                     YGTPVHFALEAAAKLEKEGRSAEVIDLRSLSPLDTEAIVASVKKTHRVLIAHEDKVFG
                     GFGGELAAICASECFPWLDAPVERVGSEFTPVGFNRILERATLPNTDKVLAAARKVLS
                     F"
     gene            2200..3054
                     /locus_tag="VFV26_07155"
     CDS             2200..3054
                     /locus_tag="VFV26_07155"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4845984.1"
                     /translation="MQFGPWDVQIVSGGTFRLDGGAMFGTVPKVVWNKLYPADEENQI
                     LMATNCLLIRGQVDGKKHVILVDNGNGDKESDEFMARFKFEGRGVLDAGLAKHSVKPE
                     DITLCILTHLHFDHAGGSTRFDAEGRTVPSFPNARYVVQAKDLADAKHPHLRVKASYL
                     PQNWEPLEAAGLLDTVDGTTEILPGISVRPAPGHIEGLQNVVVEGGGHRLVYLADLIP
                     TARHIQPAWCMGYDLDVVTCVNERQKLLDEVTGTGAICIFEHDPDIPAGTVGRDAKGR
                     YAVTPVNI"
     gene            3113..3541
                     /locus_tag="VFV26_07160"
     CDS             3113..3541
                     /locus_tag="VFV26_07160"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEX4845985.1"
                     /translation="MSFTPGSRRGAMADINMTPLIDVMLVLLIIFMIAAPMMTTGVDV
                     KLPESRTGRNLESEALTVSITFDGRLQFDKAFMALPVLANQLKAKAQSGGKRPVLVRA
                     DHNVPYGRVIQVVDAIREAGFTQVGFVTAAAPLVPVAEAK"
     gene            3538..>4292
                     /locus_tag="VFV26_07165"
     CDS             3538..>4292
                     /locus_tag="VFV26_07165"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX4845986.1"
                     /translation="MSQDLQAYLRTRARLGELGWPSGLALSLGLHLALGAVFFWPRGG
                     GGVPPEEAKVTWVNLPAAMGGTSGGSDAMEVGKSGERLRRVEEVAPVRDTSPSATAPD
                     PFALKTTKAAAKGDSKDAASQGTGTTAAKGKTAAANPVAGAVGSGNGAAFGAGTGIPG
                     LNPSSGVQGGVGLVGGVDGDFPFVWYLQQVQARITANWNRVSSTQGRVQIYFRIARDG
                     SLDRVRIEIPSGNAAMDESARMAVLRAAPLQRLP"
BASE COUNT          746 a         1593 c         1349 g          604 t
ORIGIN      
        1 ccccgaccct ggtgaaagcg gccctgaacg cgctggatgg cgacatcggc cccagccgcg
       61 aggatctctg ccactggtac gaactgatgc acctcgggcg cctgctcgac gacaaggcgc
      121 ccaactacct caagcaggcc atcggctggt cgtaccacgc cccctgcgcc ggccacgacg
      181 gcatccagct ggccgcgggc ctgtccttcc gggccggccg cgacttcctc ttcccctact
      241 accgcgacct catgacctgc ctcgccgccg gcctcacgcc cgaggagatc atcctcaacg
      301 gcatctccaa ggccacggat cccgccagcg gcggccgcca catgagcaac cacttcggga
      361 agccctccat cggcatccag aacgtatcca gcctcacggg caaccacacc cagcatgccg
      421 tgggcctggc ccgggcggtg aagacctacg gccgcgacag catcgtgttc agcagccagg
      481 gcgagtcctc gctgtccgag ggctactgct tcgaaagcat caacggcgcc gacaaggagc
      541 agctcccggt cgttttcgtc atccaggaca acggctacgg gatctccgtg cccaagcgcg
      601 accagagcgc caacgcgcac atctgcgaca acttcagcgg cttcacgaac ctgaagatca
      661 tcaagtgcga cggcctcgac ttcccggatt ccctgcgcgc catggaagaa gcgcttgcct
      721 acgtccgcac gggcaagggg cccgccatgg tgtacgcctc ctgcgtgcgc atcggcagcc
      781 actccaactc cgatcgccac gagctctacc gcgacgaagc cgagcgggcc gaggcgaagg
      841 ccaaggatcc cctgcccagg ttccgcgcct actgcctgga gcacggcctc agcgaggacg
      901 agctgggggc catcgagtcc gagaaccagg cccgctacct ggccgcccac gacagggcca
      961 tggccgcgcc cagccccgat gccgccagca tccacgactt cgtcatcccc gagggctggg
     1021 tctccgggca gttcccggat ggcacccacc aggccaccgg cgagaccatc agcttcatca
     1081 ccgccctgaa ccagacgctg aaggaggagt tccgccacaa ccccgacacc ttcatctggg
     1141 gccaggacat ggccaacaag gagaagggcg gcatcttcaa cgtgtcgaag ggcctgcagc
     1201 aggagttcgg cgggaagcgc gtcttcaacg cccccatcgc cgaggacttc atcgtgggca
     1261 cggccaacgg cttctcccgg ctggacgaca agatccgcgt ggtggtggag ggcgccgagt
     1321 tcgccgacta catctggccc gccgctgagc agatcgtgga atgcagccac gactactggc
     1381 gcagcaacgg ccagttcgca cccaacatca cggtgcgcct cgcctccggg ggctacatcg
     1441 gcggcggtct ctaccattcg cagaacgtgg agggctggct gaccaccctg cccggcatcc
     1501 gcgtggtggt gcccgccttc gccgacgacg ccgcgggcct gctgcgcacg gccctgcgca
     1561 gccgcggaac caccctctac ctggaaccga aattcctcta caacgccaag atggcccacg
     1621 ccgtggtgcc accggacttc gccgtgccct tcggcaaggc ccgggtccgc cgcgagggca
     1681 cggagctcac catcctggcc tacggcacgc cagtccactt cgccctggag gccgccgcca
     1741 agctggagaa ggaaggcagg tccgcggaag tgatcgatct ccgcagcctg agccccctgg
     1801 acaccgaggc catcgtggcc tccgtgaaga agacccaccg cgtgctcatc gcccacgagg
     1861 acaaggtctt cggcggcttc ggcggcgagc tggcggccat ctgcgcctcc gagtgcttcc
     1921 cctggctgga cgccccggtg gagcgcgtgg gctccgagtt cacgcccgtg ggcttcaacc
     1981 gcatcctcga gcgcgccacc ctccccaaca ccgacaaggt gctggcggcc gcccgcaagg
     2041 tcctctcatt ctaactgatc caccacggag acacggaggg cgccgaggaa acacggagag
     2101 accacagagg agggacacct gcccccggct ctgcatccac tccagtgtcc tccgtggttt
     2161 ctgtgtctcc gtggtgaatc ttttccctcc gaggtctcca tgcagttcgg tccctgggat
     2221 gtgcagatcg tcagcggcgg gacgttccgc ctggacggcg gcgccatgtt cggcacggtg
     2281 ccgaaggtcg tctggaacaa gctctatccc gccgacgagg agaaccagat cctcatggcc
     2341 accaactgcc tgctgattcg cggtcaggtg gacgggaaga agcacgtcat cctcgtcgac
     2401 aacggcaacg gcgacaagga gagcgacgag ttcatggccc gcttcaagtt cgagggccgg
     2461 ggcgtgctgg acgcgggcct cgcgaagcac agcgtgaagc ccgaagacat caccctctgc
     2521 atcctcaccc acctgcactt cgaccacgcg ggcggcagca cgcgctttga tgccgagggc
     2581 agaaccgtac ccagcttccc caacgcccgc tacgtggtgc aggcgaagga tctcgcggac
     2641 gccaagcacc cccatctgcg cgtgaaggcc agctacctgc cccagaactg ggaacccctg
     2701 gaagctgccg ggctcctcga caccgtggac ggcaccaccg aaatcctgcc gggcatctcg
     2761 gtgcgccccg caccgggcca catcgaggga ctgcagaacg tcgtcgtcga aggcggcggc
     2821 caccgtctgg tctacctggc cgacctcatc cccaccgccc ggcacatcca gcccgcctgg
     2881 tgcatgggct acgacctgga cgtggtcacc tgcgtgaacg agcgccagaa gctgctcgac
     2941 gaagtcaccg gcaccggcgc catctgcatc ttcgaacacg accccgacat ccccgcgggc
     3001 accgtggggc gggacgcgaa gggccggtac gccgtcaccc ccgtgaacat ctagggcctc
     3061 cagccccggc cccgggtccg cgctaaactg gatgcctccc aacgaggtgc ccgtgtcatt
     3121 cactccaggc agcaggcgcg gcgccatggc cgacatcaac atgacgccac tcatcgacgt
     3181 gatgctggtg ctgctgatca tcttcatgat cgcggcgccc atgatgacca cgggcgtgga
     3241 cgtgaagctg ccggaaagcc gcacgggacg caacctggag agcgaggcgc tcacggtcag
     3301 catcaccttc gacggccggc tgcagttcga caaggccttc atggccctgc ccgtgctcgc
     3361 caaccagctg aaggcgaagg cccagagcgg cggcaagcgc ccggtgctgg tgcgggcgga
     3421 ccacaacgtg ccctacggcc gcgtcatcca ggtggtggac gccatccggg aggcgggctt
     3481 cacccaggtg ggcttcgtca ccgccgccgc gcccctggtt cccgtcgccg aggccaaatg
     3541 agccaggatc tccaggccta cctgcgcacc cgggcccgcc tgggtgagct gggctggccc
     3601 tcgggcctgg ccctgagcct ggggctccat ctggccctgg gcgcagtgtt cttctggccc
     3661 cggggcggcg gcggagtgcc gcccgaagag gccaaggtca cctgggtgaa cctgcccgcc
     3721 gccatgggcg gcacctccgg cggctccgat gccatggagg tcggcaagtc cggcgagcgc
     3781 ctgcggcggg tggaagaggt ggcgcccgtg cgcgacacgt ccccctccgc cacggccccc
     3841 gatcccttcg ccctgaagac caccaaggcc gccgccaagg gcgacagcaa ggacgccgcc
     3901 agccagggca cgggcaccac cgccgccaag ggcaagaccg cggcggccaa ccccgtggcg
     3961 ggcgccgtgg gctcgggcaa tggcgcggcc ttcggcgcgg gcacgggcat ccctggcctg
     4021 aaccccagtt ccggtgtgca ggggggcgtg ggcctcgtgg gcggcgtgga cggcgacttc
     4081 cccttcgtgt ggtacctcca gcaggtccag gcccgcatca ccgccaactg gaaccgggtc
     4141 tccagcaccc agggccgcgt gcagatctac ttccgcatcg cccgcgacgg cagcctcgac
     4201 cgtgtgcgca tcgagattcc cagcggcaat gcggccatgg acgaaagcgc ccgcatggcc
     4261 gtcctccgcg cggcccccct ccagcgtctg cc
//
LOCUS       DASUDT010000348         4459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1319940, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000348 DASUDT010000000
VERSION     DASUDT010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4459
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319940"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2349)
                     /locus_tag="VFV26_07170"
     CDS             complement(<1..2349)
                     /locus_tag="VFV26_07170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX4845987.1"
                     /translation="MASKQASSSTPSRRWLGRALWALLALTAAGAATLAVSWSVLSRD
                     ADSFLTMFAIRVPKTITKVLDQNGNVIGIFAEEHRVVIPYGDIPKAFVNALVATEDTD
                     FWGHSGISGRGFARAGVNFITSFGRRREGGSTLTMQLIRTVTAKRQKRLDRKLKEIIL
                     ARKLEKAYSKKQIMEMYANEVYFGGGRYGIEAASEFYFGKSAPQLNVEECALLAGLVQ
                     NPNWYNPYNPDPKARAAAKSRRNHVLLRMVKEDYLKAPEASLLIDKPIRLARENAREE
                     AVAPYVVEEVRKYLYEKYGREQVLNGGLEVTTTVNSFWQEAANEAVRAGVKAVDRRRG
                     FRKDAVQFVTDPETIQLSGWKRYFEAGDSIRGVILGWKGGKAQVRLGKVQLEVPESAF
                     AWAGKDIQKLLPRGASPLFIVKTAEDGTPKALELDQDPAVEGALMAVDPRSGEIRAMV
                     GGYEFNRSKFNRTTQALRQVGSTMKAFVYGAAFTAGKTPASMVEDVPTRFLDTVDFLT
                     VTNPDGTSDFKPLRAGVKPYEPKNYERDFWGPIPIWEALRDSRNVPAVRTLEETGVMN
                     VIDFARKCGITGSIPPYPSMALGSADLTLKEMVRGYATIANGGLQAPPPFFIRKVVDR
                     NGRILESHSGAASEQVLDPQSTYQLIQCLQGVANSGTGAKSNELNWPVAGKTGTTDDH
                     TDGWFIGFSTRVVCGVWVGLDEKKTIFKGADGAKVALPIWIDFMKAALPTTPREEFEA
                     PAGMEWADVDRYTGLLATGATTDRVLHLAFKPGTVPRSGSDSE"
     gene            2378..3256
                     /locus_tag="VFV26_07175"
     CDS             2378..3256
                     /locus_tag="VFV26_07175"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HEX4845988.1"
                     /translation="MPQRLILVAKVKSPHLGSTLGAALPPFLDRGWAVTGEPALAEAW
                     GQAGLDPARLVLDAELGTSEPPADLCLVLGGDGTLLHAARRVGLRGTPILGINLGSLG
                     FLTAHPVPAAAAVVQAFLAGTLMPDQRLMLEAELWRGGTLLAQNTVLNDAVVAKGALA
                     RIMDMRLRVGDQDAGPIKADGLIVATPTGSTAYSLSAGGPILHPSLEAFVIAPICPHT
                     LTLRPTVVPAARPITITLEDAEDAHLTLDGQVGFQLLPGDQVRLRQAEARITLLQQPG
                     LDFFALLQQKLHWGDR"
     gene            3427..>4459
                     /locus_tag="VFV26_07180"
     CDS             3427..>4459
                     /locus_tag="VFV26_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4845989.1"
                     /translation="MALKERPKPFLLPEYCKGCGRCLDACAKDCITLSDQINPLTGLV
                     PVELDLTNCNACGLCMDACPEPYGLRPAHEGEIQDFELEDPAKLFGVKPSDAPTPVYI
                     PNEVLPLPRTEPLVIKGTYASALGALLAGCRHVYGYPITPSTEGAELMAKFLPKLDGT
                     FIQAVSEVAAVNMMYGTAGAGLPTMTFTSSPGFSLMLEGVSYMIGAELPGVFVDVMRG
                     GPGLGNIAPEQSDIKLACHGLGHGNTQAITLAPSTPQEMLDLTILAFELSFKYRNPVV
                     LLGDGYLGQMTGKVQLPETMIKPGIPAWAVYGDAMHRKNLISSIFLTESDLEAHNHHL
                     NAKYKAMEVE"
BASE COUNT          660 a         1608 c         1447 g          744 t
ORIGIN      
        1 ctctgaatcg ctgccggatc gcggcacggt gcctggcttg aaggccaggt gcagcacccg
       61 gtccgtggtg gcgccggtgg ccagcaggcc cgtgtagcgg tcgacgtccg cccactccat
      121 gcccgcaggg gcttcgaatt cctcccgcgg ggtcgtgggc agggccgcct tcatgaaatc
      181 gatccagatg ggcagcgcca ccttggcccc gtccgcgccc ttgaagatgg tcttcttctc
      241 gtccaggccc acccagaccc cgcacaccac gcgggtggag aagccgatga accagccgtc
      301 cgtgtggtcg tccgtggtgc cggtcttgcc cgccacgggc cagttcagct cgttgctctt
      361 ggcgcccgtg ccgctgttcg ccacgccctg gaggcactgg atgagctggt aggtgctctg
      421 gggatccagc acctgttcgc tggcggcgcc gctgtggctc tccaggatcc ggccgttgcg
      481 gtccaccacc ttccggatga agaagggcgg cggcgcctgg aggccaccgt tggcgatggt
      541 ggcgtagccg cgcaccatct ccttcagggt gaggtcggcg gaaccgaggg ccatgctggg
      601 ataggggggg atgctgccgg tgatgccgca tttccgcgcg aagtcgatga cgttcatgac
      661 ccccgtctcc tcgagggtgc gcacggccgg cacgttgcgg gaatcccgca gggcctccca
      721 gatggggatg gggccccaga aatcgcgctc gtagttcttg ggttcgtagg gcttcacccc
      781 ggcccgcagg ggcttgaaat ccgaggtgcc atccggattc gtgaccgtga ggaaatccac
      841 ggtgtcgagg aagcgcgtgg gcacgtcctc caccatggag gcgggggtct tcccggcggt
      901 gaaggccgcg ccgtagacga aggccttcat ggtggagccc acctggcgca gggcctgggt
      961 ggtgcggttg aacttggacc ggttgaactc gtagccgccc accatggcgc ggatctcgcc
     1021 gctcctcgga tccacggcca tgagggcgcc ctccaccgcg ggatcctggt ccagttccag
     1081 cgccttgggc gtgccgtcct ccgcggtctt cacgatgaac agcggcgaag cgccccgggg
     1141 cagcagcttc tggatgtcct tgcccgccca ggcgaaggcg ctctccggca cctccagctg
     1201 cactttgccg aggcgcacct gggccttgcc gcccttccag ccgaggatga cgccgcggat
     1261 gctgtcgccg gcctcgaagt agcgcttcca gccgctcagc tggatggtct ccgggtccgt
     1321 cacgaactgg acggcatcct tgcggaagcc ccggcgccgg tccacggcct tcacgccggc
     1381 ccgcacggcc tcgttggcgg cctcctgcca gaagctgttc acggtggtcg tcacttccag
     1441 gccgccgttc agcacctgct cgcggccata tttctcatag aggtacttcc gcacctcctc
     1501 gaccacatag ggcgccaccg cctcttcccg ggcattctcc cgggccaggc ggatgggctt
     1561 gtcgatgagc aggctggcct ccggggcctt gaggtagtcc tccttcacca tgcgcagcag
     1621 cacatggttc cggcgggact tcgccgcggc gcgggccttg ggatccggat tataggggtt
     1681 gtaccagttc ggattctgga ccagccccgc cagcagggcg cactcctcca cgttgagctg
     1741 gggcgcgctc ttcccgaagt agaactccga ggcggcctcg atgccgtacc ggcctccgcc
     1801 gaagtacacc tcgttggcgt acatctccat gatctgcttc ttggagtagg ccttctccag
     1861 cttgcgcgcg aggatgatct ccttcagctt ccggtccagg cgcttctggc gcttggccgt
     1921 caccgtgcgg atgagctgca tggtgagggt cgatcccccc tcccggcgcc ggccgaagct
     1981 ggtgatgaag ttcacgccgg cccgggcgaa gccccgcccg gagatgccgc tgtggcccca
     2041 gaagtccgta tcctccgtgg ccaccagcgc gttgacgaag gccttgggga tgtcgccgta
     2101 ggggatcacc acccggtgct cctcggcgaa gatgccgatg acgttgccgt tctggtccag
     2161 caccttcgtg atggtcttgg gcacgcggat cgcgaacatg gtgaggaagc tgtccgcatc
     2221 cctggacagc acggaccagg acaccgccag ggtggctgcg ccggcggcgg tgagggccag
     2281 aagggcccat agcgcccggc cgagccaccg gcgggaaggg gtggaggagg atgcctgctt
     2341 ggaagccatg tcccaaggat agcgttagag tgatcccatg ccccagcgac tgatcctcgt
     2401 ggccaaggtc aaatccccgc acctggggtc caccctaggt gcggcgctgc cgccgttcct
     2461 cgaccggggc tgggccgtga ccggggaacc ggccctcgcc gaggcctggg gccaggcggg
     2521 cctggacccg gcccgcctgg tcctcgacgc ggagctcggc acctccgagc ctcccgccga
     2581 cctctgcctg gtgctggggg gcgacggaac cctgctccac gcagcccggc gcgtgggcct
     2641 gcggggcacg ccgatcctgg ggatcaacct cggttccctg ggcttcctca cggcccatcc
     2701 ggttcccgcg gcggccgccg ttgtgcaggc cttcctggcg ggcaccctca tgccggacca
     2761 gaggctcatg ctcgaggcgg aactctggcg cggcggcaca ctcctggcgc agaacaccgt
     2821 gctgaacgat gccgtcgtgg ccaagggggc cctggcccgc atcatggaca tgcgcctgcg
     2881 cgtgggggac caggatgcgg gccccatcaa ggccgatggc ctcatcgtcg ccacgcccac
     2941 gggctccacg gcctattcgc tgtccgccgg cggccccatc ctgcacccca gcctggaggc
     3001 cttcgtcatc gcccccatct gcccccacac cctcaccctg cggccgacgg tggtgcccgc
     3061 cgcccggccc atcaccatca cgctggagga tgccgaagac gcccacctca cgctggatgg
     3121 ccaggtgggc ttccagctgc tgccggggga ccaggtgcgg ctgcgccagg ccgaggcccg
     3181 catcaccctg ctccagcagc ccggcctcga tttcttcgcc ctgctccagc agaagctgca
     3241 ctggggagat cggtaagtcg agtctggagt gaaccggtct gtcccccgca gaccgcccgg
     3301 cccgcgcccc attcccaacc gcctggtcgg tggcggtctg cgtcgcggcc cgcttgtgac
     3361 cgtgcgcaca cggggcgggc ctgacacttt cccctagtag gacctgcgtc cctgcatgga
     3421 gtctccatgg ccctcaaaga acgacccaaa ccctttctgc tgccggagta ctgcaagggc
     3481 tgcggccggt gtctcgacgc ctgcgccaag gactgcatca cgctcagcga ccagatcaac
     3541 cccctgacgg gcctggtgcc cgtggagctg gacctgacga actgcaatgc ctgcggcctg
     3601 tgcatggacg cctgccccga gccctacggc ctgcgccccg cccatgaagg cgagatccag
     3661 gacttcgagc tggaggatcc cgccaagctc ttcggggtga agcccagcga tgcccccacc
     3721 cccgtgtata tccccaacga agtgctgccc ctgccccgca cggagcccct ggtcatcaag
     3781 ggcacctacg cctcggccct gggcgccctg ctggcgggct gccgccacgt ctacggctac
     3841 cccatcaccc cctccaccga gggcgccgag ctcatggcca agttcctgcc caagctcgac
     3901 ggcaccttca tccaggccgt cagcgaagtg gccgccgtga acatgatgta cggcaccgcc
     3961 ggcgcgggcc tgcccaccat gaccttcacc tcgtcgcccg gcttcagcct gatgctggag
     4021 ggcgtgtcct acatgatcgg cgcggagctg ccgggcgtct tcgtggacgt catgcgcggc
     4081 ggccccggcc tgggcaacat cgcgcccgag cagtccgaca tcaagctggc ctgccacggc
     4141 ctgggccacg gcaacacgca ggccatcacc cttgcgccct ctacgcccca ggagatgctg
     4201 gacctcacca tcctggcctt cgagctgagc ttcaagtacc gcaaccccgt ggtcctgctg
     4261 ggcgacggct acctgggcca gatgaccggc aaggtgcagc tgcccgagac catgatcaag
     4321 cccggcatcc ccgcgtgggc ggtctacggc gacgccatgc accgcaagaa cctcatctcc
     4381 tcgatcttcc tcaccgagag cgacctcgag gcccacaacc accacctgaa cgccaagtac
     4441 aaggccatgg aagtggagg
//
LOCUS       DASUDT010000349         3094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1806414, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000349 DASUDT010000000
VERSION     DASUDT010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806414"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2086)
                     /locus_tag="VFV26_07185"
     CDS             complement(<1..2086)
                     /locus_tag="VFV26_07185"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX4845990.1"
                     /translation="MTSRRDFLKVTGAAGAGLVLGLHLDAKPRPGEAAKVLFQPNAFL
                     AVRPDGSVLITIPKAEMGQGVRTALPLALAEEMDLDWSRIEVATAQPGPDFKNMQTGG
                     STSVSTTWTPLRKAGAAAREMLKAAAAAQWNVAVGLCRTEKGFVLGPGGKKLGYGALA
                     EAAAKLPVPKDPPLKKAAEFRLLGRRTPRVDGPAIVTGKAVFGLDVRRPGQRFAAVLR
                     CPVPGGKARTWDEAKAKAVRGVKAVLQVPTGIAVVAESTWAAFKGREALAATATWDEG
                     SARDFSSAALEAKMRAALAGPADDARREGDPAKALAAAAKVLEAEYSFPYQAHATMEP
                     MNATAMILPEGAEMWAGSQSANRAQERAAAALGLKAEQMKVHVPLIGGGFGRRLGTDF
                     STEAAQVAKAAGGGPVQVVWDREDDFRHDLFHPATLHRLRAGLDGSGALAAWTHRIAG
                     PAVLRSWTGGQKSPAQAAVESNGALDIPYAIPAIAVDFAEVEAPTPLGWWRGIEIVPN
                     VFARECFLDEVAHAQGQDPLALRLQLLGSRGLVKFGREEADIRRLKKVLEVAAAKAGW
                     GRKLPAGRGLGLACHAYDGRTYAAAVAEVSVAKGQLRLHKLTCAVDCGLVVNPAGLEA
                     QVEGGLAFGLSALFSQITWEKGRTVQTGFHDFPVLRLADMPAIETHVVPSAEAPSGMG
                     EPPVPLAIPAVLN"
     gene            complement(2083..2544)
                     /locus_tag="VFV26_07190"
     CDS             complement(2083..2544)
                     /locus_tag="VFV26_07190"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX4845991.1"
                     /translation="MPAYQLTVNGRARTVDADADTPLLWVLRDTLGLTGTKFGCGQGV
                     CGSCTVHLDGKAVKSCQTSLREATGHTVLTVEGLSKDGTHPVQRAWIAEDVAQCGYCQ
                     PGMIMTAAALLKRKAHPTDGDIDQAFADHVCRCGTYPRIRKAVKRAAGGVK"
     gene            2666..>3094
                     /locus_tag="VFV26_07195"
     CDS             2666..>3094
                     /locus_tag="VFV26_07195"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HEX4845992.1"
                     /translation="MLRRMVLLMGLLAGLGLGAQGAERPAPPPTPAEKELQAPLTLDD
                     GKPTPGQAPEAAPSGLRAFGSLVLVLGLAGASLWALKKYGRGRIPGGGGGKLRVEETL
                     ALGDRRYVSILDAEGERFLIALTPQGIQLISRLDPGDRGEP"
BASE COUNT          384 a         1079 c         1180 g          451 t
ORIGIN      
        1 cattcagcac ggcggggatg gccaggggca cggggggctc gcccatgccc gagggggcct
       61 cggcgctggg gaccacgtgg gtctcgatgg cgggcatgtc cgcgaggcgc agcacgggga
      121 agtcgtggaa acccgtctgc acggtgcggc ccttctccca ggtgatctgg gagaacaggg
      181 ccgacagccc gaaagcgagg ccgccctcca cctgggcttc caggcccgcg ggattcacca
      241 ccaggccgca gtccacggcg caggtgagct tgtggaggcg gagctggccc ttggccacgg
      301 agacctccgc cacggccgcg gcgtaggtac ggccatcata ggcgtggcag gcgagcccca
      361 ggccgcggcc cgcagggagc ttgcggcccc atccggcctt ggcggcggcg acttccagca
      421 ccttcttcag gcggcggatg tccgcctcct cccggccgaa cttgacgagc ccgcggctgc
      481 ccagcagctg gagccgcagg gcgaggggat cctgaccctg cgcgtgggcc acctcgtcca
      541 ggaagcactc ccgggcgaag acattgggca cgatctcgat gccgcgccac cagcccaggg
      601 gcgtgggcgc ctccacctcg gcgaagtcca cggcgatggc cgggatggcg taggggatgt
      661 ccagggcgcc gttggattcc acggccgcct gggccggaga cttctggccg ccggtccagg
      721 agcgcagcac ggcggggccg gcgatgcggt gggtccaggc ggcgagggct ccggagccgt
      781 cgaggcccgc ccgcaggcga tgcagcgtcg ccggatggaa gaggtcgtgg cggaaatcgt
      841 cctcccggtc ccacaccacc tgcacgggac cgccgcccgc ggccttggcc acctgggcgg
      901 cctcggtgct gaagtccgtc ccgagccggc gcccgaagcc gccgccgatg aggggcacat
      961 gcaccttcat ctgctcggcc ttgagcccca gggccgcggc ggcccgctcc tgggcccggt
     1021 tggcggactg gctgcccgcc cacatctccg cgccttccgg caggatcatg gcggtggcgt
     1081 tcatgggctc catggtggcg tgggcctggt aggggaagct gtattccgct tccagcacct
     1141 tggctgcggc ggccagggcc ttggcgggat ccccctcgcg gcgggcgtcg tcggctgggc
     1201 cggcgagggc ggcccgcatc ttcgcttcca gggcggcgga gctgaagtcc cgggcggagc
     1261 cctcgtccca ggtggcggtg gcggccaggg cctcccggcc cttgaaggcg gcccaggtgc
     1321 tctcggcgac cacggcgatc cccgtgggga cctgcagcac ggccttcacg ccgcggacag
     1381 ccttggcctt ggcctcgtcc caggtcctgg ccttgccgcc gggcacgggg cagcgcagga
     1441 cggcggcgaa gcgctggccc gggcggcgca catcgagccc gaacaccgcc ttgcccgtga
     1501 cgatggcggg gccgtcgacg cgcggggtgc gccggcccag caggcggaac tccgcggcct
     1561 tcttcaaggg gggatccttg gggaccggca gcttggccgc ggcctccgcg agggcgccgt
     1621 agcccagctt cttcccgccg gggccgagca cgaagccctt ctcggtgcgg cacaggccga
     1681 ccgccacatt ccactgggcg gcggcggcgg ccttcagcat ctcgcgggcg gcggccccgg
     1741 ccttgcgcag gggcgtccag gtggtgctca cgctggtgct gccgccggtc tgcatgttct
     1801 tgaagtcggg tccgggctgg gcagtcgcga cctcgatgcg ggaccagtcc aggtccatct
     1861 cttcggccag ggccaggggc agggccgtgc gcacgccctg gcccatctcg gccttgggga
     1921 tggtgatcag cacgctgccg tccggccgca ccgccaggaa ggcgttgggc tggaacagga
     1981 ccttggcggc ctcgcctggc cggggtttgg cgtccaggtg caggcccagc acaaggcccg
     2041 cgcccgcggc gccggtcact ttcaggaagt cgcggcggct ggtcatttca cacctccggc
     2101 ggcgcgcttc acggctttgc ggatgcgggg ataggtgccg caacggcaca cgtgatccgc
     2161 gaaggcctgg tcgatgtcgc cgtccgtggg gtgggccttg cgcttcagca gggcggcggc
     2221 ggtcatgatc atgccgggct ggcagtagcc gcactgggcc acgtcctcgg cgatccaggc
     2281 gcgctgcacc gggtgggtgc cgtccttgga cagcccctcc acggtgagga cggtgtgccc
     2341 ggtcgcctcc cgcaggctgg tctggcagga tttcacggcc ttgccgtcca ggtggacggt
     2401 gcaggagccg cagacgccct ggccgcagcc gaacttggtg ccggtgaggc cgagggtgtc
     2461 gcgcaggacc cacagcaggg gggtgtcggc atcggcatcc acggtgcggg cccggccgtt
     2521 cacggtgagc tggtaggcag gcatggcagc tccttctgta tcgtgtgatg agggttctac
     2581 cctacgcccg cggcgtccgg cctgcaacgg tggcgcccct ggcatccctc tcgcccttac
     2641 tcccgggttg tgtcgggagt ttgtcgtgct gagacggatg gtgctgctca tgggattgct
     2701 ggcgggcctg ggcctggggg cccagggggc cgaacggcct gcgccgccgc cgacgcccgc
     2761 cgaaaaggaa ctgcaggctc ccttgacgct ggacgacgga aaaccgacgc cgggccaggc
     2821 ccccgaggcc gcgccctcgg ggctgcgggc cttcgggtcc ctggtgctgg tgctgggcct
     2881 ggcgggcgcc agcctctggg ccctgaagaa gtacggccgc ggccggatcc ccgggggtgg
     2941 gggcggcaag ctgcgggtgg aggagaccct cgccctgggc gaccgccgct atgtgtcgat
     3001 cctggacgcg gagggcgagc ggttcctcat cgccctgacg ccccagggca tccagctgat
     3061 ctcccgcctg gatcccggcg accggggcga gcca
//
LOCUS       DASUDT010000350         6220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_966714, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000350 DASUDT010000000
VERSION     DASUDT010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6220
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966714"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1633)
                     /locus_tag="VFV26_07200"
     CDS             complement(<1..1633)
                     /locus_tag="VFV26_07200"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HEX4845993.1"
                     /translation="MVFRLPFVQRLVTSAFSVAVLLLVTACGGGGGGSSAYSLSVNPT
                     SITFTAERDGTLPNVQSIHANFTGDGIIVGYPTGVTPPTWLSPTLVSSTSNSVTVSAQ
                     ITTTALPAGNYATTLRFVTGKSDGTHLVTRDVPVTFRVSQGLKATQTAFTFAASEGAA
                     PAAQTLNLSSDLVPYAWSLTVEPSGAGPTDWLTVSPSSGNASAPTAIQVQAASRPRGT
                     YAANLVLRNGTGIVKATIPVAYTVNGVFGLAGTFSLNLNQGSATTALDVPMTLQTHLD
                     SSAGAAQHWQITSDQPWLTVSPASGDLSANTSLTAHLNPALMGALPNGLSTATLTVHL
                     TASSYSDLSVPFVLDLNLPKVGHVAPYTTWVGRTSPVILRGSGFLPAATVSVRFGTGV
                     ATGTVVSDTEIHVTAPSSMAASRLTVSIENALGIARTGADLLVLPQPGYTATSIDLPY
                     GSRSLIQDPERQALLLVDGSSIQRIRFRNGAWSQDSLPLPSSSGIFVGLDGKDLFATA
                     GNVGINDDLLRLDPETFATKEVKTINDYYESYSLVA"
     regulatory      1936..2044
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            2304..3596
                     /locus_tag="VFV26_07205"
     CDS             2304..3596
                     /locus_tag="VFV26_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEX4845994.1"
                     /translation="MGATSPRFETLALHGGHAPDSDTKSRAVPIYQTTSYVFDSAEHG
                     ARLFNLEVPGNIYTRIMNPTTAVLEQRVAQLEGGIAGLAVASGQAAITLTLQTLLRGG
                     DHVVAGNNLYGGTYNLLHHTLPRTGITTTFVDSKRPEAFRAAITPQTRAIYLEALGNP
                     KLDVPEFALIAAIAHAAGIPLIVDNTLPSPYLLNPIAHGADIVVHSATKFLGGHGTSV
                     AGVIVDGGTFDWKGGKFPEFTEPFAAYHGAVLADLAGPAAFITKARIEGLRDTGAALS
                     PFNAFLILQGIETLPLRLERHGQNALALAQWLEQHPKVAWVNYPGLSTSENHATAARH
                     FRKGAGFGGILTFGVKGGLDAGKAVIDGVQLFSRLANVGDAKSLIIHPASTTHAQLSA
                     EERVATGVTDDLIRLSVGLEHIEDLIEDLEQALKGVQP"
     gene            3593..4543
                     /locus_tag="VFV26_07210"
     CDS             3593..4543
                     /locus_tag="VFV26_07210"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4845995.1"
                     /translation="MTTATLLPPIPLESGQSLSMEIAWRRIGHGPKKVLLIHALTGGV
                     HPDGPKGWWGPLFAADAPLAADRVSVWAPNLPGSCYGSTGPRKGEAFPDLTPRDMAGA
                     LAAWIEAEDLRFEAIAGGSLGGMVALELALRLPDRIGALGVIGTGGRSDAWLLGHNHV
                     QRRILEEPSLADDRAIALARHAAMLTFRTAKSLNARFGEGGLQPWLDHHGLALAGRFT
                     RESYLALLKAWDAHDLGRNRGGLTAALGGLRCPLHLLGIDSDQLFVPGLVLELAEAAV
                     AAGADIRLDWLHTPHGHDAFLMEWGQVAVWLDQLLAGETP"
     gene            4540..5892
                     /locus_tag="VFV26_07215"
     CDS             4540..5892
                     /locus_tag="VFV26_07215"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX4845996.1"
                     /translation="MSRPTSLRVLKFGGSSVGSAEALRRAAAIVREALPAGGLVVVSA
                     LRGTTDHILEACTAAGAGDLASAQTHLAALRDRHREVATGLDLLDAVEAAWAPLLDRL
                     DQLLTGMAMLGEATPRGRDAALAVGETLSAHLAAACFQGIFRDVREVLRTDDRFSRAR
                     PQLDALRAAAAPWREALAGGALWITQGFLGATAEGHTTTLGRGGSDTSATLLGEALEA
                     EEVQIWTDVDGVLSADPSLVPEARPIPRMSLGEAEALSAFGAKVLHADSLAPVGRAGF
                     RLVVANTLRPGASRTEILPVPPLRAAGEVTSVAYKEGISLLRFPAAAGLEAPLDAARR
                     LDEAGALRFGLIASPAGTLLAIRSETPAAAKALDALAASGLPCEPGWAVVALVGEGLR
                     TDPLAALRHLAALGQEPIGGLLTGSSTVSIAFLVHESRLGDLIPRLHDRCVIRSQEHP
                     "
     gene            5889..>6220
                     /locus_tag="VFV26_07220"
     CDS             5889..>6220
                     /locus_tag="VFV26_07220"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4845997.1"
                     /translation="MSLDLSRLRILVTGGSRGIGAATVRLLSDLGARVAFTYLNQEQA
                     ALDLQAELAAQGRTALAIRADQRLRADAQTAVAAVEAAWGGLDAFVGNAGIWAATPAE
                     LQDEDILL"
BASE COUNT         1000 a         2219 c         2084 g          917 t
ORIGIN      
        1 cggccacgag ggaataggat tcgtagtagt cattgatggt cttcacctcc ttggtggcga
       61 aggtctcggg atcaaggcga agcaggtcgt cgttgatgcc cacgttgccc gcggtagcga
      121 agagatcctt gccatccagc cccacgaaga tgcccgagga gctggggagc ggaagggaat
      181 cctgggacca ggccccgttc ctgaagcgga tccgctgaat gctcgaaccg tccaccagga
      241 gcagggcctg gcgctcggga tcctggatca ggctgcggga accgtaaggc aggtcgatgg
      301 aggtcgcggt gtacccgggc tggggcagca ccagcagatc cgcccccgtc cgcgcgatgc
      361 ctaaggcatt ctcgatgctg accgtcaggc gcgaagcggc catggaactg ggggccgtca
      421 catggatttc ggtatcgctc accacggtgc ccgtggcgac ccccgtgccg aagcggaccg
      481 acacggtggc agcgggaagg aagcccgagc cccggagaat cacaggactg gtgcggccga
      541 cccaagtcgt atatggagcc acatggccaa ccttcggaag gttcaggtcc aggacgaaag
      601 gcacgctcag atccgagtag gagctggcgg tgagatggac agtcagcgtg gccgtgctca
      661 gcccgttggg aagcgccccc atgagggccg gattgaggtg ggcggtgagg gatgtgttcg
      721 cgctgagatc gccggaagcc ggggagaccg tgagccaagg ctgatcggag gtgatctgcc
      781 agtgctgggc cgcgccagcg ctggaatcca gatgggtctg gagggtcatg ggcacatcca
      841 gggccgtggt tgcggagccc tggttcaggt tcaggctgaa ggtccccgcg aggccgaaga
      901 ccccattcac ggtgtaggcc accgggatgg tggccttgac gatgccggtg ccgttccgca
      961 gcaccagatt ggcggcgtag gttccccggg ggcgggaagc cgcctggacc tggatggccg
     1021 tcggcgccga ggcgttgccc gaggacgggg agaccgtgag ccaatccgtg gggcccgcgc
     1081 ccgagggctc caccgtgagg ctccaggcat agggcacgag atcggaactg aggttgaggg
     1141 tctgggccgc gggggcggcc ccttcgctgg ccgcgaaagt gaaggcggtc tgggtggcct
     1201 tcaacccctg gctcacacgg aaggtgaccg gcacatcccg ggtcaccaga tgggtgccgt
     1261 cagacttccc ggtgacgaag cggagcgtcg tggcgtagtt gccggcaggc agtgcggtgg
     1321 tcgtgatctg cgcagagact gtgacggaat tgctggtcga ggaaaccagg gtgggagaaa
     1381 gccaagtcgg gggcgtgaca ccggtcgggt acccaacgat gatgccgtcc cctgtgaaat
     1441 tggcatggat ggactggaca ttgggaagcg tgccgtcacg ctccgcagtg aacgtgatgc
     1501 tggtggggtt gacgctcagg ctgtaggcgg aactcccacc gccaccgcca ccgcaggctg
     1561 tcaccagcag caacacggcc acagaaaagg cgctggtcac caggcgctgg acaaagggaa
     1621 ggcggaagac catggcgacc tcaaaagaaa cataaggaat cgatctttaa ggaattcgac
     1681 attattcagg gattatttcg atcattctac ataatagaca ccacaaaaac gccagaacta
     1741 ttgagtgacg tcctaccgga atgccatgac tgccagtcca cccttccggg tcatccgccc
     1801 attcaccacc tcacgacagg tccggatttc cgtggcggaa acggatgagg gttgccaacc
     1861 cagacgggag gcgctacctt gcttcaccgg ccctgtgggg ccgttctgct acgagatcct
     1921 tgccagttcc atagcgagtt atccagaaag gtggagggac gggccctgtg aaaccttggc
     1981 aacctgcgaa agcaaggtgc caattcctgc cgtgattgag ccatcaatcg cggagagatg
     2041 tcgagctgtg tcgaactgac gcaatcatcg aagggggccc gagacatcgg gccccctttt
     2101 tctattcctg gacttgcttg gactgccagg gcctcggcct ttccaattca gagatcacga
     2161 cgagggattc accacggagg caccgaagac actgagaaag gcacaccgag aaagcatttc
     2221 atgattttcc gtgattccct ccgtgcgctc cgtgtctccg tggtggatct ttcggacggt
     2281 tctctcccaa gccaggagac gccatgggcg ccacctcccc ccgcttcgaa accctcgccc
     2341 tccacggggg ccacgcgccg gactcggata cgaagagccg cgccgtgccc atctaccaga
     2401 ccacgagcta cgtgttcgat tccgccgagc atggcgcccg actcttcaac ctggaggtgc
     2461 ccgggaacat ctacacgcgg atcatgaacc ccaccaccgc cgtgctggag cagcgcgtgg
     2521 cgcagctgga gggcggcatc gcgggcctgg cggtggcttc gggccaggcg gccatcacgc
     2581 tcaccctcca gaccctgctg cggggcggcg accacgtcgt ggccggaaac aacctctacg
     2641 gcggcaccta caacctgctg caccacaccc tgccccgcac gggcatcacc accaccttcg
     2701 tggattcgaa acgccccgag gccttccgcg ccgccatcac cccgcagacc cgcgccatct
     2761 acctggaggc cctgggcaac cccaagctgg acgtaccgga gttcgccctc atcgccgcca
     2821 tcgcccacgc ggcgggcatc cccctcatcg tggacaacac cctgcccagc ccctacctgc
     2881 tgaaccccat cgcccacggc gcggacatcg tggtgcacag cgcgacgaag ttcctgggcg
     2941 gccatggcac ctccgtggcg ggggtcatcg tggatggcgg caccttcgac tggaagggcg
     3001 gcaagttccc cgagttcacc gagcccttcg ccgcctacca tggcgcggtg ctggccgacc
     3061 tcgcgggccc cgcggccttc atcaccaagg cccgcatcga gggcctgcgg gacaccggcg
     3121 cggcactgag ccccttcaac gccttcctca tcctccaggg catcgagacg ctccccctgc
     3181 gcctggaacg ccacggccag aacgccttgg ccctggccca gtggctggag cagcacccca
     3241 aggtggcctg ggtgaactat cccggtcttt ccaccagcga gaaccacgcc acggccgccc
     3301 gccacttccg gaagggcgcg ggcttcggcg gcatcctcac cttcggcgtg aagggcgggc
     3361 tggacgcggg caaggccgtc atcgacggcg tgcagctctt ctccaggctg gccaacgtgg
     3421 gggatgccaa gagcctcatc atccaccccg ccagcaccac ccacgcgcaa ttgtccgccg
     3481 aagagcgcgt ggccacgggc gtcacggacg acctcatccg cctttccgtg ggcctcgagc
     3541 acatcgagga tctgatcgag gacctggagc aggccctgaa aggtgtccag ccatgaccac
     3601 cgccaccctg ctgccgccca tccccctgga aagtggacaa tcactgtcca tggagattgc
     3661 ctggcgccgc atcggccacg gaccgaagaa ggtgctgctc atccacgccc tcaccggggg
     3721 cgtccatccc gatggcccca agggctggtg gggcccgctg ttcgcggcgg atgcccccct
     3781 ggcggcggac cgcgtctcgg tctgggcgcc caacctgccg ggctcctgct acggctccac
     3841 ggggccgcgg aagggcgagg ccttcccgga cctcaccccc cgggacatgg ccggggccct
     3901 ggcggcctgg atcgaggcgg aggacctgcg cttcgaggcc atcgccgggg gcagcctggg
     3961 cggcatggtg gccctggagc tggccctgcg cctgccggac cgcatcggcg ccctgggcgt
     4021 catcggcacc ggcggccgca gcgacgcctg gctgctgggc cacaaccacg tgcagcggcg
     4081 catcctggag gagccctcgc tggccgatga ccgcgccatc gccctggccc gccacgccgc
     4141 catgctcacc ttccgcacgg cgaagagcct caatgcgcgc ttcggggagg gcggcctcca
     4201 gccctggctg gatcatcacg gcctggccct ggccgggcgc ttcacccggg agagctacct
     4261 ggccctgctg aaggcctggg acgcccacga cctgggccgg aaccgcggcg ggctcaccgc
     4321 cgccctgggc ggcctgcgct gccccctgca cctcctgggc atcgattcgg accagctctt
     4381 cgtgccgggc ctcgtcctcg aactggcgga agcggcggtg gccgccggcg ccgacatccg
     4441 cctggactgg ctccatacgc cccacggtca cgacgccttc ctcatggagt ggggccaggt
     4501 ggccgtgtgg ctcgaccagc tgctcgccgg ggagacgcca tgagccgccc cacgagcctc
     4561 cgcgtactca agttcggcgg cagttccgtg ggcagcgccg aggccctgcg ccgggccgcc
     4621 gccatcgtcc gcgaggcatt gccggcgggc ggcctcgtgg tggtctcggc cctccgcggc
     4681 acgacggacc acatcctcga ggcctgcacc gccgcgggcg cgggcgacct ggcctccgcc
     4741 cagacgcacc tggccgcgct ccgggacagg catcgcgaag tcgccaccgg actcgacctc
     4801 ctggatgcgg tcgaagccgc ctgggcgccc ctcctggatc gcctcgacca gctgctcacg
     4861 ggcatggcca tgctgggcga agccacgccc cggggccggg atgcggccct ggccgtgggc
     4921 gagaccctgt cggcccacct ggcggccgcc tgcttccagg ggatcttccg ggacgtccgc
     4981 gaggttctgc ggacggacga ccgcttcagc agggcccggc cgcagctgga cgccctgcgc
     5041 gccgcggcgg ccccctggcg cgaggccctg gcgggcggcg ccctctggat cacccagggc
     5101 ttcctgggcg ccaccgcgga gggccacacc accaccctgg gccggggcgg ctccgacacc
     5161 agcgccacgc tgctgggcga agccctcgag gcggaggagg tgcagatctg gaccgatgtg
     5221 gacggcgtgc tcagcgccga ccccagcctg gtgcccgaag cccggcccat tccccggatg
     5281 agcctgggcg aggccgaggc cctcagcgcc ttcggcgcca aggtgctgca cgcggattcc
     5341 ctggccccgg ttggccgtgc gggcttccgg ctcgtggtgg ccaacaccct gcggcccggc
     5401 gcctcccgca cggagatcct ccccgtgccg cccctccgcg ccgcgggcga agtcacctcc
     5461 gtggcctaca aggaggggat ctccctgctc cgcttcccgg ccgccgcggg cctggaggcg
     5521 cccctggacg ccgcccggcg cctggatgag gccggggccc tgcgcttcgg cctcatcgcc
     5581 agccccgcgg gcaccctcct ggccatccgt tcggaaacgc cggccgccgc gaaggcgctg
     5641 gacgccctcg cggcctcggg cctcccctgc gaacccggct gggccgtggt ggccctggtg
     5701 ggcgagggcc tgcggaccga tcccctggcc gccctccggc acctcgccgc cctcgggcag
     5761 gaacccatcg ggggcctgct cacgggcagc agcaccgtct ccatcgcctt cctcgtccac
     5821 gaatcccggc tgggggacct gatcccccgc ctgcatgacc gctgcgtgat ccgcagccag
     5881 gagcacccat gagcctcgac ctctcccgcc tccgcatcct cgtcaccggc ggcagccgcg
     5941 gcatcggcgc cgccaccgtg cgcctcctgt cggacctcgg cgcccgggtg gccttcacct
     6001 acctgaacca ggaacaggcc gccctggacc tccaggcgga gcttgcagcc cagggccgca
     6061 ccgcgctggc catccgggcc gaccagcgcc tccgggccga tgcccagacc gccgtggccg
     6121 cggtggaggc cgcctggggg ggcctggacg ccttcgtggg caatgccggc atctgggccg
     6181 ccacgcccgc ggaactgcag gacgaggaca tcctcctgga
//
LOCUS       DASUDT010000351         2046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1077503, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000351 DASUDT010000000
VERSION     DASUDT010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077503"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VFV26_07225"
     CDS             <1..1083
                     /locus_tag="VFV26_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4845998.1"
                     /translation="PARHPIRALILTPTRELAMQVEESVRTYGKYIPLRSATIFGGVN
                     INPQTKALRAGAEILVATPGRLLDHQGQGNLNFSQLEVVILDEADRMLDMGFIRDIQK
                     IIALLPANRQTLLFSATFTDEIKQLASKFLKNPASVQITPQNTAAELVRQVVHPVDRE
                     RKRALLAHLITSRKLEQVLVFTRTKHGANRLSEQLDKDGISSMAIHGNKSQPQRIKAL
                     EDFKKGAVRVLVATDIAARGLDIDMLPHVVNYELPQVPEDYIHRIGRTGRAGAEGEAL
                     SLVCVDEHRLLKDIEKLLRKELPKDVIQGYAPDPSIPAEPIQTGRQGGGGGRSRGPAR
                     AARPSTGQTPRGERGRHPARTSPRGK"
     gene            1155..1628
                     /locus_tag="VFV26_07230"
     CDS             1155..1628
                     /locus_tag="VFV26_07230"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX4845999.1"
                     /translation="MSDAGLGTLAAAVRRLLKQVVWARLAPHGLSPQQFWVMLVLLQK
                     GPSSLHPLAQQVWMDDPTASRLVKSMVGRGWLTARPDPRHGRRILIDLSPAARPLAGE
                     LQNLAADIRESMVAGLSPQEQAAVRNGLRAMIGNLESMLAAVPDPGAGEGEAVAS"
     gene            1682..>2046
                     /locus_tag="VFV26_07235"
     CDS             1682..>2046
                     /locus_tag="VFV26_07235"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4846000.1"
                     /translation="MRAPTALAPALIALAASAALPLGAHGRHQAAAAEPAKVHKVEKV
                     AENTYCIFGQGGNIGLIVTSRHAILIDDQFERLVPGLLEAVRSITDKPIKYLINTHAH
                     PDHVGGNVVLEKQVSAIIA"
BASE COUNT          344 a          809 c          624 g          269 t
ORIGIN      
        1 cctgcgcgcc atcccatccg cgccctcatc ctcaccccca cccgcgagct ggccatgcag
       61 gtggaggaga gcgtccgcac ctacggcaag tacatccccc tccgctccgc caccatcttc
      121 ggcggcgtga acatcaaccc ccagaccaag gccctgcgcg caggcgccga gatcctggtg
      181 gccacccccg gccgcctgct ggaccaccag ggccagggca acctcaactt cagccagctc
      241 gaggtcgtga tcctcgacga ggccgaccgc atgctcgaca tgggcttcat ccgggacatc
      301 cagaagatca tcgccctgct gcccgcgaac cggcagaccc tgctcttttc ggccaccttc
      361 acggacgaga tcaagcagct ggcctccaag ttcctcaaga accccgcctc cgtgcagatc
      421 acgccccaga acaccgccgc cgagctggtc cgccaggtcg tccaccccgt ggaccgggag
      481 cgcaagcgcg ccctgctggc ccacctgatc accagccgca agctggagca ggtgctggtg
      541 ttcacccgca ccaagcacgg cgccaaccgg ctgtccgagc agctggacaa ggacggcatc
      601 agctccatgg ccatccacgg caacaagagc cagccccagc gcatcaaggc ccttgaggac
      661 ttcaagaagg gcgccgtccg cgtcctggtg gccacggaca tcgccgcccg cggcctggac
      721 atcgacatgc tgccccacgt ggtgaactac gagctgcccc aggtgcccga ggactacatc
      781 caccgcatcg gccgcacggg ccgcgccggc gccgagggcg aagccctctc cctggtctgc
      841 gtggacgagc accggctgct caaggacatc gagaagctgc tgcggaagga gctgcccaag
      901 gacgtgatcc agggctacgc gccggatccc agcatccccg ccgagcccat ccagaccggg
      961 cgccagggcg gtgggggggg acgcagccgc ggccccgccc gcgccgcccg cccctccacg
     1021 ggccagacgc cccggggcga gcggggacgc caccccgccc ggaccagccc gcgcggcaag
     1081 tgacctatac cccttgacac gagggtaaac ccggcgcagc cttgttgctt atgcaagaac
     1141 tggctcccga atccttgtct gacgctggcc tgggaaccct ggccgccgcg gtccgccgcc
     1201 tgctcaagca ggtcgtgtgg gcgcgcctgg ccccccacgg cctcagcccc cagcagttct
     1261 gggtgatgct ggtcctcctc cagaagggcc cctcctcgct ccaccccctg gcccagcagg
     1321 tctggatgga cgaccccacg gccagccgcc tggtgaaatc catggtgggc cgcggctggc
     1381 tgacggcccg gccggacccc cgccatgggc gccggatcct catcgatctg tcgcccgcgg
     1441 cccggcccct ggctggagag ctgcagaatc tggcggcgga catccgcgaa tccatggtgg
     1501 ccgggctgtc cccccaggag caggccgccg tgcggaacgg cctccgggcc atgatcggca
     1561 acctggaatc catgctcgcg gccgttcccg acccgggcgc cggcgagggc gaggccgtcg
     1621 cgtcgtgacc cgggccatcg cctgggcgga taccatcccg atgtcccgac ctggaggatc
     1681 catgcgcgcc ccgaccgccc tcgctccggc cctcatcgcc ctggccgctt ccgcggccct
     1741 ccccctcggc gcccacgggc ggcatcaggc cgccgcggct gaaccggcga aggtccacaa
     1801 agtcgagaaa gtggccgaga acacctactg catcttcggc cagggcggaa acatcggcct
     1861 catcgtcacc agccggcacg ccatcctcat cgacgaccag ttcgagcgtc tggtgccggg
     1921 gcttctggag gccgtccgct ccatcacgga caagcccatc aagtacctga tcaacaccca
     1981 cgcccacccc gaccatgtgg gcggcaacgt ggtgctggag aagcaggtca gcgccatcat
     2041 cgccca
//
LOCUS       DASUDT010000352         2433 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1033025, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000352 DASUDT010000000
VERSION     DASUDT010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1033025"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VFV26_07240"
     CDS             <1..372
                     /locus_tag="VFV26_07240"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX4846001.1"
                     /translation="AEALLSELDGPRTLDALASSPYAELLAGEREHMDRALQALLPIL
                     PPNLELRVDLADVAGLGFYTGPTLRLWAPGAQQELAAGGRYDRLFPDLGRPWQAAGFC
                     VRLSRLLDLADTRPDLFEQPQ"
     gene            369..1019
                     /gene="hisG"
                     /locus_tag="VFV26_07245"
     CDS             369..1019
                     /gene="hisG"
                     /locus_tag="VFV26_07245"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX4846002.1"
                     /translation="MTQPPILIAFPKGRLGDELVPRLAGTPLALDAAALKSRVLRIPT
                     ATPGVAALLLKGADLPRYVAAGVASLGIVGSDTLDEMDVDLLELADLGFGACRLSLCA
                     LAGVTLATLRARPHLRLATKFPKATEAWLAREGLTAELVPLSSSAELAPLLGLADAIV
                     DLVQTGGTLKAHGLVETAVLGRSSARLVAARGAYLSEPGRIRPLADLLLDALKAKA"
     gene            complement(1297..2397)
                     /gene="mqnC"
                     /locus_tag="VFV26_07250"
     CDS             complement(1297..2397)
                     /gene="mqnC"
                     /locus_tag="VFV26_07250"
                     /EC_number="1.21.98.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic dehypoxanthinyl futalosine synthase"
                     /protein_id="HEX4846003.1"
                     /translation="MSTTLAAPEAILEGALQGRRISPSEALVLLEQAELPDLAVAATA
                     VRDRHNNPGRVSYVIDRNVNYTDVCNVYCTFCAFYHKPGDSRGYVLTKEQLKQKAEET
                     KAIGGTGFLLQGGVNPDLPWDYYLDLVRHLRHDLGIWVHGFSPVEIQMMAKLSGQTLR
                     KTIADLREAGLGSIPGGGAEILVDRIRKKIAPLKGGREKWLEVMEAAHEEGVKTTGTM
                     MFGITETLAERIEHLEALRDQQDRALARANGGGYTAFAAWPFQSGHTPWEGKVPKPTD
                     VEYLRTIAVARIFLDNFAHIQSSWVTMGRKTGQLALHYGCDDMGSLMLEENVVSAAGT
                     CYSVNKDEMTRMITAAGYEPWQRDNIYGEIRG"
BASE COUNT          338 a          850 c          819 g          426 t
ORIGIN      
        1 gctgaggcgc tgctctccga gctggatggc ccgcggacgc tggatgcgct cgcctccagc
       61 ccctacgcgg agctgctggc cggcgagcgg gagcacatgg accgcgccct ccaggccctg
      121 ctgcccatcc tgccacccaa cctggagctg cgggtggacc tggccgatgt ggcggggctg
      181 ggcttctaca ccgggcccac cctgcgcctg tgggcccccg gcgcccagca ggagctcgcc
      241 gcgggcggcc gctacgaccg cctcttcccg gacctgggcc gcccctggca ggccgcaggc
      301 ttctgcgtgc gcctgtcgcg cctcctggac ctcgccgaca cccggcctga cctgttcgag
      361 cagcctcaat gacccagccg cccatcctca tcgccttccc caagggccgc ctcggcgacg
      421 agctggtgcc gaggctcgcg ggcacgcccc tggccctgga tgccgcggca ttgaaatcgc
      481 gggtgctgcg cattcccacc gccacgcccg gcgtggcggc cctgctgctc aagggcgcgg
      541 atctgccgcg ctatgtggcc gccggcgtgg cctcgctggg catcgtgggt tccgacaccc
      601 tggacgagat ggacgtggat ctgctggagc tggcggacct gggattcggc gcctgccgcc
      661 tgtcgctgtg tgccctggcg ggcgtcacgc tggcgaccct gcgcgccagg ccgcacctgc
      721 gcctggccac caagttcccc aaagccaccg aggcctggct cgcgcgggag ggcctcacgg
      781 ccgagctggt gcccctcagc agcagcgcgg aactggctcc cctgctgggg ctggccgatg
      841 ccatcgtgga cctggtgcag accggcggca ccctcaaggc ccacggcctg gtggaaaccg
      901 ccgtcctggg ccgctcctcc gcccgtctcg tggccgcccg cggggcctac ctcagcgaac
      961 ccgggcgcat ccggcccctg gccgatctgc tgcttgatgc actgaaagca aaagcctaga
     1021 caggattaac aggattgaaa gatggattaa caggatgcga gcgttggaac cctgttaccc
     1081 ggttatcggc ctgactcagc cagaaaagca agcaaccgcg aatgacgcga aagggcgcaa
     1141 aacgcggcgg agatgggccg cctgggcctt cggcccccag tcgcgcgatt cgcgtcattc
     1201 gcggttcggt ccttccaggc ggaggcaagc cgataatcag atcctgttaa tcctgcattt
     1261 catcctgtta atcctgtcca ggttttttcc gttggatcag ccgcggatct caccgtagat
     1321 gttgtcccgc tgccagggtt cgtaaccggc ggcggtgatc atgcgggtca tctcgtcctt
     1381 gttcacgctg tagcaggtgc ccgcggcgct gacgacgttc tcctcgagca tgaggctgcc
     1441 catgtcgtcg cagccgtagt gcagggccag ctggccggtc ttgcggccca tggtgaccca
     1501 gctgctctgg atgtgcgcga agttgtccag gaagatgcgg gccacggcga tggtgcggag
     1561 gtactcgaca tccgtgggct tgggcacctt gccttcccag ggcgtgtggc cgctctggaa
     1621 gggccaggcg gcgaaggccg tgtagccgcc accgttggcc cgcgccaggg cgcggtcctg
     1681 ctggtcgcgc agcgcttcca ggtgttcgat gcgttcggcc agggtctccg tgatgccgaa
     1741 catcatggtg cccgtggtct tcacgccctc ctcgtgggcg gcctccatca cttccagcca
     1801 cttctcgcgg ccgcccttca ggggcgcgat cttcttgcgg atgcggtcca ccaggatctc
     1861 cgcgccgccg ccggggatgg agccgaggcc cgcttcccgc agatccgcga tggtcttgcg
     1921 cagtgtctgg ccgctgagct tcgccatcat ctggatctcc accggcgaga agccgtggac
     1981 ccatatgccc aggtcatggc ggaggtggcg caccaggtcc aggtagtagt cccagggcag
     2041 gtccggattc acgccgccct gcagcaggaa gcccgtgccg ccgatggcct tggtctcctc
     2101 ggccttctgc ttcagctgct ccttcgtcag cacgtagccg cggctgtcgc cgggcttgtg
     2161 gtagaaggcg cagaaggtgc agtagacgtt gcagacgtcc gtgtagttca cgttccggtc
     2221 gatgacgtag ctgacgcgcc ccggattgtt gtggcggtcc cggacggcgg tggcggccac
     2281 ggcgaggtcc ggcagctccg cctgctccag caggaccagg gcctcggacg gagagatccg
     2341 gcggccctgg agcgcgccct ccaggatcgc ctcgggcgca gcgagtgtcg tggacatgcc
     2401 tagacctggt accccatcac ctggaggcac cgg
//
LOCUS       DASUDT010000353         4740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_347936, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000353 DASUDT010000000
VERSION     DASUDT010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4740
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347936"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VFV26_07255"
     CDS             complement(<1..337)
                     /locus_tag="VFV26_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX4846004.1"
                     /translation="MTPKEPSSAPKLELFCKLQAEKVPFIAKASVPSVFGKFMVYGFL
                     EHATGKEHLAIVSGEIDARRRIPVRIHSECWTGDVLGSLKCDCRQQLEEGLRHVAQHG
                     GMVLYLRQEG"
     gene            complement(444..1439)
                     /locus_tag="VFV26_07260"
     CDS             complement(444..1439)
                     /locus_tag="VFV26_07260"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEX4846005.1"
                     /translation="MLDRFAAFLDRHAKVLLTTHENPDGDGVGAAVALAAHLKGQGRE
                     ARIVVTPALPENLRFLDPEGWIEAFDAADAHRDLAAWPDAWLLIDASEPHRMGALFAA
                     FEATKAERACLDHHMKDEPKGFDDEFTDSTASASAELVYDLVRPRIGGDLPPVMAQAL
                     YAGLVSDTGNFRHSNSTPKVHRAAADLLAQGVHPSRTFNALYQTATPAKLKLFGRALD
                     GLQLRDGGRFAYVAVTRADLAACGATHEDLDELVEEPRKLRGVEVAALFSEAADGRAK
                     VSLRSRERVDVNAVCRLFDGGGHRLASGAKAAMPLEAFIAQVEAAVSAQMSRDIV"
     gene            complement(1540..2607)
                     /gene="add"
                     /locus_tag="VFV26_07265"
     CDS             complement(1540..2607)
                     /gene="add"
                     /locus_tag="VFV26_07265"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEX4846006.1"
                     /translation="MPKLSLQDLQRLPKTDLHVHLDGSLRIPTILDLAEQQKVKLPAD
                     TPEGLRPFVEVGEDCKSLVEYLRAFDVTLSVMQTYDSLVRPAFELAEDSAKENVRYLE
                     VRYSPILHQQKGLTLHAIVQAVLEGLALAERKYNIKTGVILCGMRHISPDISLRLADL
                     TVAFKNKGVVGFDLAGAEENFPAKRHKDAFGRVLQNNINCTLHAGEAYGPESIHQAIH
                     LCGAHRIGHGVRLIEDGDLLNYVNDHRIPLECCPSSNVQTKAVKKMADHPIRLFYDLG
                     LRVTVNTDNRMVTNTTVSREFQVIHEELGFNLEEIKELIIMGFKSAFLPYALKRAMLA
                     EVVHELKAFKPGSLESKKEQL"
     gene            complement(2691..3191)
                     /locus_tag="VFV26_07270"
     CDS             complement(2691..3191)
                     /locus_tag="VFV26_07270"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEX4846007.1"
                     /translation="MRKSKIERPEEQQRFETFLRSRQLKLTGERLELVEEVFGQPHHF
                     DADQLHMALKQKGKAISRATVYRTLDLLVQCGLVRKSSFGDQHAHYEAVRSDEHHDHL
                     ICLNCDAIIEFYRPDLEALQDTICQEYNFKPMHHSHQIFGLCKACQARETDGPTLAHR
                     MSQLNV"
     gene            3295..3849
                     /locus_tag="VFV26_07275"
     CDS             3295..3849
                     /locus_tag="VFV26_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846008.1"
                     /translation="MAIVIIQSPSLSPDQKSRIGERVITALQQEGMNPGSVVVLFRPE
                     RGDIYMDGLLVQAQAPAAAPVPVPATPKAATVAPAPEPPAFKTKARRSKPELDDMKQN
                     LMGILQDRGSLSSFEAQVALDLKDCDWAPATLRRLFTELEEEKLISKNGQKRGTRYVW
                     RGIVNTPRQGTPIIKLVKAETDEA"
     gene            3860..4576
                     /locus_tag="VFV26_07280"
     CDS             3860..4576
                     /locus_tag="VFV26_07280"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4846009.1"
                     /translation="MDWFAWDFDRPAYFQIYADKAADAVSEGPALAALLNLPSGSRVL
                     DLPCGWGRLHPHLKARGLEVVGGDLSRLNLRRHAVEHPCPLARLDFRALPFRDACADG
                     VFCAYTSWGYFATEAENQAQLSEFARMLRPGGTLLLDLAGRDFLKAAVADVEGYWLDF
                     PDEGYQERTRWSPDGRRIRTERRCQGEAFRHDIWIPTDAEVRACLASAGFTAVEAFGG
                     LDGRPWEAAAERWIYRALRR"
BASE COUNT          762 a         1569 c         1603 g          806 t
ORIGIN      
        1 ggccctcctg gcgcagatag agcaccatgc cgccgtgctg ggccacgtgg cgcaggccct
       61 cctccagctg ctggcggcag tcgcacttga ggctgcccag cacgtcgcca gtccagcact
      121 ccgagtggat gcgcaccggg atgcggcggc gggcgtcgat ctcgccgctg acgatggcca
      181 ggtgctcctt gcccgtggcg tgctccagga acccgtagac catgaacttg ccgaacacgg
      241 acggcaccga ggccttggcg atgaagggca ccttctccgc ctggagcttg cagaacagtt
      301 cgagcttcgg ggcgctgctg ggttctttgg gggtcatggg gatccaggaa gggggcgtcc
      361 tgtccgttgg atgccgcccg ggagaactag aagtctggga ccagggccct ggaagggcaa
      421 ccctgtttcg tctaattcat aatctagaca atatcgcgac tcatctgagc cgagaccgcc
      481 gcttccacct gggcgatgaa ggcctccagg ggcatggcgg ccttggcgcc ggaggccagc
      541 cggtggccgc ccccatcgaa caggcggcag accgcattca catccacccg ctcccgggag
      601 cgcaggctca ccttggcccg gccgtcggcg gcttcggaaa acagggccgc cacctccact
      661 ccccggagct tgcggggctc ttccaccagc tcgtccagat cctcgtgggt ggcgccgcag
      721 gcggcgagat ccgcccgggt cacggccacg taggcgaagc ggcccccgtc gcggagctgc
      781 aggccgtcca gggcccgccc gaagagcttg agcttggcgg gcgtggcggt ctggtagagg
      841 gcattgaagg tgcgcgaagg atggacgccc tgggccagca ggtccgccgc ggcgcgatgc
      901 accttcggcg tgctgttcga gtgccggaag ttgcccgtgt cgctcaccag gcccgcatag
      961 agcgcctggg ccatcacggg cggcaggtcg ccgccgatgc ggggccgcac caggtcgtag
     1021 accagctcgg cgctggcgct ggcggtggaa tccgtgaact cgtcgtcaaa gcccttcggt
     1081 tcgtccttca tgtggtgatc gaggcaggcc cgctcggcct tcgtcgcctc gaaggccgcg
     1141 aagagcgccc ccatgcggtg gggctccgag gcatcgatga gcagccaggc atcgggccag
     1201 gccgccaagt cgcggtgggc gtcggcggcg tcaaaggcct cgatccagcc ctcgggatcc
     1261 aggaaccgca ggttctccgg cagcgccggc gtcaccacga tgcgggcctc ccggccctgc
     1321 cccttcagat gagcggccag ggccacggcg gcacccacgc catccccatc cgggttctcg
     1381 tgggtggtga gaaggacctt ggcgtggcgg tcgagaaagg cggcgaagcg atcgagcatg
     1441 aatcctgacc tcgatggtca ggatagcagg atcaaagctg ctccttcttc tcggcatcgg
     1501 ctccgccgat acgcgagacg gcgccgaccc aacaagcccc tacagttgct ccttcttact
     1561 ctccaggctg cccggcttga aggccttcag ctcgtgcacc acttccgcca gcatggcgcg
     1621 cttgagggcg tagggcagga aggcgctctt gaagcccatg atgatgagct ccttgatctc
     1681 ctccaggttg aagcccagct cctcgtggat gacctggaac tcgcggctca ccgtggtgtt
     1741 cgtcaccatg cggttgtcgg tgttcaccgt gacgcgcagg cccaggtcgt agaacaggcg
     1801 gatgggatgg tccgccatct tcttcacggc cttggtctgc acgttgctcg aggggcagca
     1861 ttccagcggg atgcggtggt cgttcacgta gttcagcagg tcgccgtcct cgatgagccg
     1921 cacgccgtgg ccgatgcggt gggccccgca gaggtggatg gcctggtgga tgctctcggg
     1981 cccgtaggcc tcgcccgcgt ggagggtgca gttgatgttg ttctggagca cgcggccgaa
     2041 ggcgtccttg tggcgcttgg cggggaagtt ctcctcggcc cccgccagat cgaagcccac
     2101 cacgcccttg ttcttgaagg ccaccgtgag gtccgccagc cgcagggaga tgtccggcga
     2161 gatgtggcgc atgccgcaga ggatgacgcc ggtcttgatg ttgtacttcc gctccgcgag
     2221 ggccaggccc tccagcaccg cctggacaat ggcgtggagc gtgaggccct tctgctggtg
     2281 gaggatgggg ctgtagcgca cctccagata gcggacgttc tccttggccg agtcctcggc
     2341 cagctcgaag gccgggcgca ccaggctgtc gtaggtctgc atcacggaca gcgtcacatc
     2401 gaaggcgcgc aggtactcca ccagggactt gcagtcctcg cccacctcca cgaaggggcg
     2461 caggccttcc ggtgtgtccg cgggcagctt caccttctgc tgctcggcca ggtcgaggat
     2521 ggtgggaatg cggaggctgc cgtcgaggtg gacgtgcaga tccgtcttgg ggaggcgctg
     2581 gaggtcctga agcgaaagtt tcggcatggc ctagcctagc gcctcaggtc gccgtgggct
     2641 attgggacga aggccggagg gcaagcagaa gcccggcccc ccagagcgca tcagacgttc
     2701 aattggctca tgcggtgggc gagggtaggg ccgtccgtct cccgggcctg gcaggccttg
     2761 cacaggccga agatctggtg gctgtggtgc atgggcttga agttgtactc ctggcagatg
     2821 gtgtcctgga gcgcctccag gtccgggcgg tagaactcga tgatggcgtc gcagttgagg
     2881 cagatcaggt ggtcgtggtg ctcgtcgctg cgcacggcct cgtagtgcgc gtgctggtcg
     2941 ccgaagctgc tcttccgcac cagcccgcac tgcaccagca ggtcgagggt gcggtacacc
     3001 gtggcccggc tgatggcctt gcccttctgc ttcagggcca tgtgcagctg gtccgcgtcg
     3061 aagtggtggg gctggccgaa gacttcctcc accagttcga ggcgctcgcc cgtcagcttg
     3121 agctggcgag atcgcaggaa ggtttcgaag cgctgctgtt cttccgggcg ttcgatcttg
     3181 gacttgcgca tgggaccctc gctgggaagt ctatccgttt cactcgcaag attgcatttt
     3241 acagataaaa acaacagcgt attatgaaac gtctgtatac atagtggagt cgccatggcc
     3301 atcgtcatta tccaatcccc cagcctgtcg ccggaccaga agtcccgcat tggcgagcgg
     3361 gtgatcacgg ccctccagca ggaaggcatg aatcctggct ccgtggtggt cctcttccgc
     3421 cccgagcgcg gtgacatcta catggatggt ctgctggtgc aggcccaggc tccggccgcc
     3481 gcgccggttc cagttcccgc cacccccaag gccgccaccg ttgctccggc acccgaaccc
     3541 cctgccttca agaccaaggc ccgccgctcc aagcccgagc tcgacgacat gaagcagaac
     3601 ctcatgggca tcctccagga ccgcggctcc ctcagcagct tcgaagccca ggtggccctc
     3661 gacctcaagg actgcgactg ggccccggcc accctccgcc gcctgttcac ggaactggag
     3721 gaggagaagc tcatcagcaa gaacggtcag aaacggggca cccgctacgt ctggaggggc
     3781 atcgtgaaca ccccccgcca gggcactccc atcatcaagc tggtgaaggc cgaaaccgac
     3841 gaagcgtgac gccagcccca tggactggtt cgcctgggat ttcgaccgcc ccgcctactt
     3901 ccagatctac gcggacaagg ccgcggacgc cgtttcggaa ggaccggcgc tcgcggccct
     3961 tctgaatctg ccctcgggaa gccgggtcct tgacctcccc tgcggctggg ggcgcctgca
     4021 tccccacctg aaggccaggg gactggaggt ggtggggggc gacctgagcc ggttgaacct
     4081 gcggcgccat gccgtggagc atccctgccc tttggcccgc ctggacttcc gggccctgcc
     4141 ctttcgcgat gcctgcgccg acggcgtctt ctgcgcctac accagctggg gctacttcgc
     4201 caccgaggcc gaaaaccagg cccagctttc ggaatttgcc cgcatgctgc gacccggcgg
     4261 gaccctgctg ctggatctgg cgggccgcga cttcctgaag gccgccgtgg ccgatgtgga
     4321 gggctactgg ctcgacttcc cggacgaggg ctaccaggag cggacccgct ggagccccga
     4381 tggccggcgc atccgcacgg agcggcgctg ccagggcgaa gcgttccgcc atgacatctg
     4441 gatacccacg gatgcggaag tccgggcctg cctcgccagc gccggattca cggccgtcga
     4501 agccttcggc ggcctggacg gccggccctg ggaggcggcc gccgagcggt ggatctaccg
     4561 ggccctcagg cgctgatctt ccgggtggcg aacaggtagg cgccgaagcc cagcccggaa
     4621 aaccccaggg ccaacggcag gcccagcccc tgcaccaggg cgccgcccac cagcgggccc
     4681 accatcaggc ccacggaata ggccaggttc aggatggaga aggccgaggc gaagctctgg
//
LOCUS       DASUDT010000354         4951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_723851, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000354 DASUDT010000000
VERSION     DASUDT010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4951
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723851"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /gene="motB"
                     /locus_tag="VFV26_07285"
     CDS             complement(<1..854)
                     /gene="motB"
                     /locus_tag="VFV26_07285"
                     /inference="COORDINATES: protein motif:HMM:NF006548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX4846010.1"
                     /translation="MAEQQPEVKIRIVKKKGGHGAAHGGAWKVAYADFVTAMMAFFLL
                     MWLLNSADPNTKAGIAGMFQDANFFNTERGKEILANHGKGILPGGRGMAPGPDGDGGT
                     ETTIESPGAAEEERKAMESTAEAIEKAFQQDELLQAFQDQISMDFTDEGLRIQIQDKA
                     AQVLFDSGSAKLKPYTLTILKEIAKELGKLPNRVVIGGHTDAAQYSNKAYTNWELSAE
                     RANAARRVMESAAGGLRSNQVRRVTGYADTIPFQDKDPKDPQNRRISIIVVSAATEAA
                     ETKHQKAQP"
     gene            complement(861..1727)
                     /gene="motA"
                     /locus_tag="VFV26_07290"
     CDS             complement(861..1727)
                     /gene="motA"
                     /locus_tag="VFV26_07290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEX4846011.1"
                     /translation="MFFIIGLVVVFGAVIAGYLMEGGSIPSLLHPLPAEGTIIFGAAI
                     GSFLAANPMHLIKRVVADLSKPLKGSPYTKPVYMEMLMMQYEVFVNIKKGGLLALEQD
                     VNDPHNSAIFKKYTAFTNNHHALDFFCDSMKLLINGSAKMDEIDLVMDADLDVHHAEN
                     AAPGAAVSTLADAFPAFGIVAAVMGVVITMGFLDQPPNVIGGKVGAALVGTFLGILLA
                     YGVFQPLAKNIDAVNAAESFYYNCLRAGLTSFGNGAAPVTAVEFARRNIPSTERPGSG
                     ELEEVVRQIKPR"
     gene            1831..2823
                     /locus_tag="VFV26_07295"
     CDS             1831..2823
                     /locus_tag="VFV26_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEX4846012.1"
                     /translation="MAPSSPQLGPVGSYVKHHFRHFNAAALVDAAEGYRVYLEQGGKM
                     MVTLAGAMSTAELGLSFAEMIRQDKVHLIVCTGANLEEDIFNLVAHDFYERVPHYRDL
                     TPQDEADLLGRHMNRVTDTCIPEMEAMRRMEKAMLDVWTRADQAGERYFPHEFFQQVL
                     KSGVLKPSYQIDPKHSWMLAALEKNVPIVVPGWEDSTLGNMYAAAVIRGEIKNVHTVR
                     TGIEYMTWLAKHYQEVTKTSTLGMFQIGGGIAGDFPICVVPMLHQDLELTEVPLWGYF
                     CQISDSTTSYGSYSGAVPNEKITWGKLGIDTPKFIVESDATIVAPLVFAYLLGW"
     gene            complement(2937..3686)
                     /locus_tag="VFV26_07300"
     CDS             complement(2937..3686)
                     /locus_tag="VFV26_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846013.1"
                     /translation="MALLHRLPPVLRALLAQALAFAALVVLAWLGLRFPGLVWVLMQA
                     VGAVFLSRWMALDPRWILMQGTLPFLVRALWGAAIPAWVYLALFAALALVFGGGLISR
                     VPLYHASREAWEKLEDLVPDRPGLRFVDLGCGFGGPVAHLAARRPDGIFVGMEASPFT
                     WLVAWLRCLPRQNAHIRLGSLWRTDLAGFEVAYAFLSPVPMPALWAKARREMRPGTRF
                     ISHSFDVPGATPHRVVPVEGREGARLLVFEL"
     gene            3685..4602
                     /gene="gluQRS"
                     /locus_tag="VFV26_07305"
     CDS             3685..4602
                     /gene="gluQRS"
                     /locus_tag="VFV26_07305"
                     /inference="COORDINATES: protein motif:HMM:NF004315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEX4846014.1"
                     /translation="MTYPNRMLVGRFAPSPTGILHLGNLRTALASWLSVRAVGGRWLI
                     RMEDVDGPRCHRDLGEAQLRDLAALGLDSDGPVVWQSERGLIYREALAGLHAGHRLYP
                     CHCTRKDLQKLASAPHAEDGLRPYPGHCRSRAWEGFDQALRIRLPEGSVGWADRLFGV
                     QADDPAALTGDPLLFRRDGCFAYHLAVVVDDGAQGVTEVVRGADLRPVTATQIRIQEA
                     LGLPRPAYAHLGLVVAPDGSRLGKRAGAQGLDALAARGVPAADILGWLGWSLGCLERP
                     EPCRARDLIGEFDWARVPRDEVRVPETWA"
     gene            complement(4604..4939)
                     /locus_tag="VFV26_07310"
     CDS             complement(4604..4939)
                     /locus_tag="VFV26_07310"
                     /inference="COORDINATES: protein motif:HMM:NF036460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5329 domain-containing protein"
                     /protein_id="HEX4846015.1"
                     /translation="MIPVPFLLLAAPAPVAEAQKIEALIQAVADLQGAVFIRNGSEHA
                     PKEAAEHLRLKWKNAGRRVKTAPEFIQHCASGSSMSGKPYEIRLKDGRTVLARDWLWT
                     ELKRMETKP"
BASE COUNT          790 a         1628 c         1692 g          841 t
ORIGIN      
        1 ggctgggctt tctggtgctt ggtttcggcc gcctcggtgg cggcggagac cacgatgatg
       61 gaaatgcggc ggttctgggg atccttggga tccttgtcct ggaaggggat ggtgtcggca
      121 tagccggtga cgcgccgcac ctggttggac cgcaggcccc ccgcggcgct ctccatgacc
      181 cggcgggcgg cattggcgcg ctcggcgctg agctcccagt tggtgtaggc cttgttggaa
      241 tactgggcgg cgtccgtatg gcctccgatg accacgcggt tcgggagctt gcccagctcc
      301 ttggcgatct ccttgaggat ggtcagcgtg tagggcttca gtttggcgct gccggaatcg
      361 aagagcacct gggcggcctt gtcctggatc tggatgcgca gcccctcgtc cgtgaagtcc
      421 atgctgatct ggtcctggaa ggcctggagc agctcatcct gctggaaggc cttttcgatg
      481 gcctcggcgg tggattccat ggccttccgt tcttcctcgg cggcacctgg gctttcgatc
      541 gtcgtttcgg tcccgccgtc cccgtccggg ccgggggcca tgccccgtcc gccgggcagg
      601 atgcccttgc cgtggttggc caggatctcc ttgccccgct cggtattgaa gaaattggca
      661 tcctggaaca tccccgcgat gccagccttg gtgttggggt ccgcgctgtt gagcagccac
      721 atcagcagga agaaggccat catggccgtc acgaaatcgg cgtaggccac cttccaggcg
      781 ccgccatggg cggctccgtg gccgcccttc ttcttgacga tccggatttt gacttccggc
      841 tgctgctcgg ccacgcccac ctaccttggt ttgatctgcc gcaccacttc ctccaactcc
      901 cccgaacccg ggcgctcggt ggaggggatg ttgcggcggg cgaattccac ggcggtcacg
      961 ggggccgcgc cgttgccgaa gctggtgagg ccggcccgca ggcagttgta gtagaaggac
     1021 tcggccgcgt tcacggcgtc gatgttcttg gccaggggct ggaacacgcc gtaggccagg
     1081 aggatgccca ggaaggtgcc caccagggcg gcgcccacct tgccgccgat gacgttgggc
     1141 ggctggtcca ggaagcccat ggtgatcacc acgcccatga cggcggccac gatgccgaac
     1201 gcggggaagg cgtccgcaag tgtgctcaca gcggccccag gcgcggcgtt ttccgcgtgg
     1261 tggacatcga gatcggcgtc catcaccagg tcgatctcgt ccatcttggc gctgccgttg
     1321 atgagcagtt tcatggaatc acagaagaag tccagggcgt ggtggttgtt cgtgaaggcc
     1381 gtgtatttct tgaagatcgc ggaattgtgg ggatcgttga catcctgttc cagggccagc
     1441 aggccgccct tcttgatgtt cacgaacacc tcgtactgca tcatcagcat ttccatgtac
     1501 acgggcttgg tgtagggact tcccttcagg ggtttcgaca ggtcggccac cacccgcttg
     1561 atgaggtgca tgggattggc cgcgaggaac gagccgatgg cggcgccgaa gatgatcgtg
     1621 ccctccgcgg gcagcggatg caggaggctg gggatgctcc ccccctccat gaggtagccg
     1681 gcgatgaccg cgccaaagac cacgaccaga ccgatgatga agaacatgct gcatctcctg
     1741 cccgtttcat cggtccccga agcccgggac tgaattctgg tgtcgggccg ggggcgggcc
     1801 gctggcacaa tgaaaggatt cggaggattt atggcccctt ccagccccca gctcggcccc
     1861 gtcggcagtt atgtgaagca tcatttccgg catttcaacg ccgcggccct ggtggacgcc
     1921 gccgagggct accgggtcta cctggagcag ggcgggaaga tgatggtgac cctggcgggg
     1981 gccatgagca ccgcggagct gggcctctcc ttcgccgaga tgatccgcca ggacaaggtg
     2041 cacctcatcg tctgcacggg cgccaacctg gaggaggaca tcttcaacct ggtggcccac
     2101 gacttctacg agcgcgtgcc ccactaccgc gacctcacgc cccaggacga ggcggatctc
     2161 ctcggccgcc acatgaaccg cgtgacggac acctgcatcc ccgagatgga ggccatgcgc
     2221 cgcatggaga aggccatgct ggacgtgtgg acccgggccg accaggccgg cgagcgctac
     2281 ttcccccacg agttcttcca gcaggtgctg aagtccggcg tgctgaagcc ttcgtaccag
     2341 atcgatccca agcattcctg gatgctggcg gcgcttgaaa agaacgtgcc catcgtcgtt
     2401 ccgggctggg aggacagcac cctgggcaac atgtacgccg ccgccgtcat ccgcggcgag
     2461 atcaagaacg tccataccgt gcgcacgggc atcgagtaca tgacctggct ggcgaagcac
     2521 taccaggagg tcaccaagac ttcgaccctg ggcatgttcc agatcggcgg cggcatcgcc
     2581 ggggatttcc ccatctgcgt ggtgcccatg ctccatcagg acctggaact gaccgaggtt
     2641 cccctctggg gctacttctg ccagatcagt gacagcacca ccagctacgg ctcctactcg
     2701 ggcgccgtgc ccaacgaaaa gatcacctgg ggcaagctcg gcatcgacac ccccaagttc
     2761 atcgtggaaa gcgacgccac catcgtcgcc ccgctggtct tcgcctatct cttgggctgg
     2821 taagaaaaga taaaagatca ccaccaaggc accaaggcac caagaactgc aatagcaggc
     2881 tctttggctt ttcttggtgc cttggtgcct tggtggtaaa tcagtttcct cgtgattcag
     2941 agctcgaaga ccaatagccg cgccccttcg cgcccctcca cgggaaccac gcggtggggc
     3001 gttgctccgg gcacgtcgaa gctgtggctg atgaagcggg tgccgggcct catctcccgg
     3061 cgggccttgg cccagagggc gggcatgggc acgggggaga ggaaggcgta ggccacctcg
     3121 aagcccgcaa ggtccgtgcg ccagaggctg cccaggcgga tgtgggcatt ctgccggggc
     3181 aggcagcgca gccaggccac cagccaggtg aagggcgagg cttccatgcc cacgaagatc
     3241 ccgtcggggc gccgggcggc gaggtgcgcc acggggccgc cgaagccgca gcccagatcc
     3301 acgaagcgca ggcctggccg gtcggggacc aggtcttcca gcttctccca ggcctcccgg
     3361 ctggcgtggt agagcgggac ccggctgatc aggccgccgc cgaagaccag cgccagggcc
     3421 gcaaacaggg ccaggtagac ccacgcgggg atggcggcac cccacagggc ccgcaccagg
     3481 aagggcaggg ttccctgcat gaggatccag cgtggatcca acgccatcca gcgggacagg
     3541 aagaccgcgc ccaccgcctg catcagcacc cacaccagcc ccgggaacct cagtcccagc
     3601 caggccagca ccaccagcgc cgcgaaggcc agggcctgcg ccagcagggc gcgcaggacg
     3661 ggcggaaggc ggtggagaag ggccatgacc tatcctaatc ggatgctcgt tggccgcttc
     3721 gccccttcgc ccaccggaat cctccacctg gggaacctcc gcacggcgct ggcctcgtgg
     3781 ctgtccgtgc gggccgtggg cggccgctgg ctcatccgca tggaggatgt ggacggtccc
     3841 cgctgccacc gcgacctggg tgaggcacag ctgcgcgacc tggcggcgct ggggctggac
     3901 tccgatgggc ccgtggtctg gcaatccgag cggggcttga tctaccgcga ggcgctggcg
     3961 gggctccacg ccgggcacag gctctatccc tgccactgca cccgcaagga tctgcagaag
     4021 ctcgcttccg cgcctcacgc cgaggatggc ctgcgtccct acccgggtca ctgccggagc
     4081 cgggcctggg agggcttcga ccaggcgctg cggatccgcc tacccgaagg gtccgtaggt
     4141 tgggcggacc gcctgttcgg cgtccaggcg gacgatcccg cggccctcac gggggacccg
     4201 ctgctcttcc gccgggacgg ctgcttcgcc taccacctgg cggtggtggt ggacgatggc
     4261 gcccagggtg tgacggaggt ggtgcggggc gcggacctgc ggcccgtgac ggccacgcag
     4321 atccggatcc aggaggccct gggcctgccg cgcccggcct acgcccacct gggcctggtg
     4381 gtggccccgg acggcagccg cctggggaag cgggccgggg cccagggcct cgacgccctg
     4441 gcagcccggg gggttcccgc ggcggacatc ctgggctggc tgggctggag cctgggctgc
     4501 ctggaacggc ccgagccctg ccgggccaga gacctcatcg gggaattcga ctgggcccgg
     4561 gtgccccggg acgaggtgcg ggtgcccgaa acctgggcct gattcagggc ttcgtctcca
     4621 tccgtttcag ctcggtccac agccagtccc gggccagcac cgtgcggccg tccttgaggc
     4681 ggatctcgta gggtttcccg ctcatggaac tgcccgaggc gcagtgctgg atgaactccg
     4741 gggcggtctt cacccgccgg ccggcgttct tccacttcag gcgcaggtgc tccgcggcct
     4801 ctttcggggc atgctcgctg ccgttccgga tgaagacggc gccctggagg tcagccacgg
     4861 cctggatgag cgcctcgatc ttctgggctt cggccaccgg ggccggggcg gcgaggagca
     4921 ggaacgggac agggatcatg cttcaagcat g
//
LOCUS       DASUDT010000355         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2159749, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000355 DASUDT010000000
VERSION     DASUDT010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2159749"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VFV26_07315"
     CDS             complement(<1..217)
                     /locus_tag="VFV26_07315"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846016.1"
                     /translation="MNASIIGQMAVSGALMGLVYALIAYGFQLTYATSKSINFGQGEL
                     VMVSAFFSLTLTNLGLPYWLMVPGGLLF"
     gene            complement(290..1555)
                     /locus_tag="VFV26_07320"
     CDS             complement(290..1555)
                     /locus_tag="VFV26_07320"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4846017.1"
                     /translation="MLKQTFYGSLLLAAFGLQAGDTVKLAITGPFTGGSAPMGASMRD
                     GAKLAISEINAAGGIQVGGRKMKIEIIERDDEAKNERGALIAQELASMGDLSGVIGTV
                     NTGVCMAGDKHFQEKGITKIICPAAGSASMTQWSKAGVKDNSIFRFAAHDGIQAAMVV
                     EEAINRKFTKVAVVFDSTNYGVSGRDDMLDQIRKQGSKLQIVAQEKFNIGDKDMTAQL
                     LRAKSAGAQAILIWGIGPELAAVANGMAKIGMKAPLIGGWTLSMSNFIDNAGKNGNGT
                     LMPQTFIEEPITPKAKSFIEGYHQTFKVGRIPSPVAAAQGYDSVHLFAAAVKQAGTTD
                     TRKIKEALEDLKEPVKGVIATWNRPFTKWDPANVETHEAFRREQTVMGMVQDGRVVFA
                     NASDKARLIKAAAGTPAAKPAAKPKTRTK"
     gene            complement(1662..>2054)
                     /locus_tag="VFV26_07325"
     CDS             complement(1662..>2054)
                     /locus_tag="VFV26_07325"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEX4846018.1"
                     /translation="PIFWIDFTLGGLRRWGTDARFPIPLPGQGPAFAWCGLGHPEAFY
                     ADLLVAGQAWSGSHSYPDHRGPTPADLVRLQARARTEDADWLVCTEKDAVKLGRAHAQ
                     TLDMPLFIAEQRVIGGEALLAWVKARLA"
BASE COUNT          306 a          618 c          750 g          380 t
ORIGIN      
        1 cgaaaagcag gccgccgggc accatcagcc agtagggcag gccgaggttg gtgagcgtga
       61 ggctgaagaa ggccgagacc atcaccagtt caccctggcc aaagttgatg ctcttgctgg
      121 tggcataggt gagctggaag ccgtaggcga tgagggcata gacgaggccc atgagggcgc
      181 cgctgacggc catctgtccg atgatcgaag cattcatgtc ggggccctcg gggtggggcg
      241 gaaaagccgg ggggccgaag cccccccgga tcacaggtgt gcaggtggcc tacttggtcc
      301 tggtcttggg cttggcggcc ggtttcgcgg caggcgttcc ggcggcggcc ttgatgaggc
      361 gggccttgtc ggaggcgttg gcgaagacca cgcggccgtc ctgcaccatg cccatcaccg
      421 tctgctcgcg gcggaaggct tcgtgggtct cgacattggc ggggtcccac ttggtgaagg
      481 gccggttcca ggtggcgatg acgcccttca cgggttcctt caggtcctcc agggcctcct
      541 tgatcttgcg ggtgtccgtg gtgccggcct gcttcacagc ggcggcgaag aggtggacgg
      601 agtcatagcc ctgggcggcg gccacggggg aggggatccg gcccaccttg aaggtctggt
      661 gatagccctc gatgaagctc ttggccttgg gcgtgatggg ctcctcgatg aaggtctggg
      721 gcatgagggt gccgttgccg ttcttcccgg cgttgtcgat gaagttggac atggagagcg
      781 tccacccgcc gatgaggggg gccttcatgc cgatcttggc catgccgttg gccacggctg
      841 ccagctcggg gccgatgccc cagatcagga tggcctgggc gcccgcggac ttggcgcgca
      901 gcagctgggc ggtcatgtcc ttgtcgccga tgttgaactt ctcctgggcc acgatctgga
      961 gtttgctgcc ctgcttcctg atctggtcca gcatgtcgtc gcggccggac acgccgtagt
     1021 tggtggagtc gaagaccacg gccaccttgg tgaacttgcg attgatggcc tcctcgacca
     1081 ccatggccgc ctggatgccg tcgtgggccg cgaagcggaa gatggagttg tccttcacac
     1141 cggccttgct ccactgggtc atggaggcgg agcccgcggc ggggcagatg atcttggtga
     1201 tgcccttctc ctggaagtgc ttgtcgcccg ccatgcagac gcccgtgttc acggtgccga
     1261 tgacaccgga gaggtcgccc atggaggcca gttcctgggc gatgagggcg ccgcgctcgt
     1321 tcttcgcctc gtcgtcgcgc tcgatgatct cgatcttcat cttgcggccg cccacctgga
     1381 tgcccccggc ggcgttgatt tcggagatgg ccagcttggc gccgtcccgc atggaggcgc
     1441 ccatgggtgc cgagccgccg gtgaagggcc cggtgatggc gagcttgacg gtgtcaccgg
     1501 cctggaggcc gaaggccgcc agcagcagcg aaccgtagaa ggtctgcttg agcatggttt
     1561 cccccgagga gaatggaacc agttggagtg ggttggtggg cgcaagcata gcggtgcggc
     1621 cttcctttgg gaaggctgac cggttccttc ctgcccgttg ttcaggccag gcgggccttc
     1681 acccaggcaa gcaaagcttc cccaccgatg acccgctgct cggcgatgaa caggggcatg
     1741 tccagggtct gggcgtgggc ccggcccagc ttcaccgcgt ccttttcggt gcagaccagc
     1801 cagtcggcgt cctctgtccg tgcgcgggcc tggaggcgta ccaggtcggc gggtgtgggg
     1861 ccccggtgat ctgggtagct gtgggaaccc gaccaggcct gcccggccac aaggagatcc
     1921 gcgtagaacg cttccgggtg gcccaggccg caccacgcga aggccggccc ctggcccgga
     1981 agggggatgg gaaagcgggc gtcggtgccc cagcggcgaa gcccgcccag ggtgaagtcg
     2041 atccagaaga tggg
//
LOCUS       DASUDT010000356         4560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_547314, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000356 DASUDT010000000
VERSION     DASUDT010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_547314"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..3085)
                     /locus_tag="VFV26_07330"
     CDS             complement(32..3085)
                     /locus_tag="VFV26_07330"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEX4846019.1"
                     /translation="MKPLRLTLEAFGPYAGRQDLDFADLKEQSFFLIHGPTGAGKTSI
                     LDGISYALYGQTSGGLRETRDLRSHFAAVEAPTRVVFDFALGDRKYRVERAPEQQVPK
                     QRGGGTKKQPYAAHLWELVNGAEVPLATEKPTTVDAKVADLLGFKAGQFRQVVLLPQG
                     RFQEFMLAGSSERQAILQTLFQTTRYADITEALVEEEKGLRETLRTAQAEARQLLTQA
                     GVATPQELPGKLQAAALLAEERTRDQAAASDQLGRADAALREGTRAAERLAEREAARA
                     EQARLQGLARIMEARRTELDRARRCESVLPAARHLEEALARVQELEQEEARLAEAAEA
                     RAQALARTEAALAEAEQHEVRREELRRTIDRLKDLEPKLEALELARKEAREAALERNR
                     LDDLASGQKRRLETAKLELTRQKTLLQDTRTEASQLAGREGLLVLVRQKRTQREDFDR
                     AGEEVDRAAAALEAARALQVAARQEVQGARERHRVLQERRLVAQAARLAHGLKPGEPC
                     PVCGSEAHPHLAQPSVDLPDEQELRQALERQEDAETALARAQDAAASRLATLETARAR
                     RQDLIERLGEHAAVESETMAAIETRHREELDRSRAAEAGLARAEQRLAEAEAARNQAE
                     AQLAETHQRLSECMVQEAGAKARMQMLEDALLQELRVPGALSARRHEAEEALAQSEAR
                     LKSAREARNPAHSAAIEAQATLKAHGTRLEAARTDSWNASGAFEEALAAAHFHSRGDF
                     DLARRSPEDMDSMARSLEAHAAESAASADRAARAEAQAEGLATPDLPTLQTVRDEAQA
                     RFAQAAEALGHAQSEQTALQRLEEALTRLETRRSAEERRHRAAASLARIAKGEDGARV
                     SFERYVQGALLDEVLVSASERLRRMSKQRYALRRAAGGGDLRKAGGLELEITDSHTGR
                     ARAVSSLSGGEGFQASLALALGLSDVVQRHAGGIRLDTVFIDEGFGSLDPEALDLALR
                     TLEDLNQGGRLVGLISHLEEVKARISARLEVTPGPGGSHARFRVD"
     gene            complement(3082..4209)
                     /locus_tag="VFV26_07335"
     CDS             complement(3082..4209)
                     /locus_tag="VFV26_07335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEX4846020.1"
                     /translation="MRFLHTSDWHLGKTLCNANLLDDQAHALDQVAAMVKETRAEALV
                     VAGDLYDRAVPPKEAVALLDDTLDRIVRGLGVPVLIIAGNHDSPERLGFASGFLETQG
                     LHVVGPLEAANPVLIGSAAFHLLPYADPATARHAIQQDDIRTHQDALAAQLARARASH
                     PKGRRFVAVAHAFVAGGEGSDSELGLAIGGTGEVDAALFKACDYAALGHLHRPQEAGF
                     AHVRYAGSLLKYSASEAAHVKGLTLVELPSRGPARTEFLALTPRRELRRLRGHFDDLL
                     RGPQGNPDDYLFLDLLDEGPVLDAMARLRQIYPNILGIQPAPPGPAPTQDTVRAADRD
                     LDPATLFEAFFRDTAGRDMDEEERTLFREVAGRSLSGDGAQ"
BASE COUNT          532 a         1566 c         1779 g          683 t
ORIGIN      
        1 ggagtctacc acgccatgcg aggtaaaaac cctaatccac ccggaaccgt gcgtggcttc
       61 ccccggggcc cggcgtcacc tccagccggg cggagatgcg ggccttgacc tcttccaggt
      121 ggctgatgag gcccacgagg cggcccccct ggttcaggtc ctccagggtg cggagggcca
      181 ggtccagggc ctcgggatcg aggctgccga agccctcgtc gatgaacacc gtgtccagcc
      241 ggatgccgcc cgcgtggcgc tgcaccacgt ccgaaaggcc cagggccagg gcgaggctgg
      301 cctggaaacc ctcgccgccg gacagggagc tcacggcccg ggcgcggccc gtgtggctgt
      361 ccgtgatctc cagctccagg ccgccggcct tccggagatc cccgccgccg gcggcgcggc
      421 gcagggcgta gcgctgcttg ctcatgcggc gcaggcgctc ggaggcggaa accagtacct
      481 cgtcaaggag ggcgccctgc acgtaccgct cgaaggacac ccgggcgcca tcctcgccct
      541 tggcgatgcg ggccaggctg gcggcggcgc ggtggcggcg ctcctcggcg ctccgccggg
      601 tctcgaggcg ggtgagggcc tcctccagtc gctggagggc ggtctgttcg gactgggcat
      661 ggcccagggc ctcggcggcc tgggcgaagc gggcctgggc ttcgtcccgg accgtctgga
      721 gcgtgggcag gtccggggtt gccaggccct ccgcctgggc ctcggcccgg gcggcgcgat
      781 ccgcggaagc ggcggattcg gcggcgtggg cctccaggct gcgggccatg gaatccatgt
      841 cctcggggct ccgccgggcc aggtcgaagt ccccccggct gtggaaatgg gcggcggcca
      901 gggcctcctc gaaggcgccg ctggcgttcc aggaatcggt gcgggccgcc tccagccggg
      961 ttccatgggc cttcagggtg gcctgggcct cgatggccgc cgagtgggcg gggttccggg
     1021 cctcgcgggc cgacttcagc cgcgcctcgg actgggccag ggcctcttcg gcctcgtggc
     1081 ggcgggcgga gagggccccg ggaacgcgca gttcctggag cagggcgtcc tcgagcatct
     1141 gcatgcgggc cttggctccc gcttcctgga ccatgcactc ggacagccgc tgatgggtct
     1201 cggccagctg ggcctccgcc tggttccgcg cggcctccgc ctcggccagg cgctgctcgg
     1261 cgcgggccag gcccgcctcg gcggcgcggc tgcgatccag ttcctcccgg tgccgggtct
     1321 cgatggccgc catggtctcg gattccacgg cggcatgctc gcccagccgc tcgatgaggt
     1381 cctggcggcg ggcgcgggcg gtttcgaggg tggcgaggcg ggaggcggcg gcatcctggg
     1441 cgcgggccag ggcggtttcg gcgtcctcct gccgctccag ggcctgacgg agttcctgtt
     1501 cgtccggcag gtccacggag ggctgggcca ggtggggatg ggcttcgctg ccgcagacgg
     1561 ggcagggctc gccgggtttc aggccgtggg cgaggcgggc ggcctgggcc accagccgcc
     1621 gctcctggag gacccggtgg cgctcccggg cgccctggac ctcctggcgg gccgccacct
     1681 gcaaggcgcg ggcggcctcc agggcggcgg cggcgcggtc gacctcttcc ccggcgcggt
     1741 caaagtcctc gcgctgggtg cgcttctggc ggacgaggac cagcaggccc tcgcgccccg
     1801 ccagctggga ggcttccgtc cgcgtgtcct ggagaagggt cttctggcgg gtgagctcca
     1861 gcttggcggt ctcgaggcgg cgcttctgcc cgctggccag gtcgtcgagc cggttccgct
     1921 ccagggccgc ctcccgggcc tccttccggg ccagctccag ggcctccagc ttgggctcga
     1981 gatccttcag gcgatcgatg gtgcggcgca gctcctcccg gcggacctcg tgctgctcgg
     2041 cttcggccag ggcggcttcg gtccgggcga gggcctgggc ccgggcttcg gcggcctccg
     2101 ccagacgggc ctcctcctgc tccagttcct ggacccgggc cagggcttcc tccagatggc
     2161 gggcggcggg caggacggat tcgcagcggc gggcccggtc cagctccgtg cggcgggcct
     2221 ccatgatgcg ggccaggccc tggaggcggg cctgttccgc ccgggcggcc tcccgttccg
     2281 cgaggcgctc ggcggcgcgc gtgccttccc gcagggctgc gtccgcccgg cccagctgat
     2341 cgctggcggc ggcctggtcc cgggtccgct cctcggccag cagggccgca gcctgcagct
     2401 ttccgggcag ctcctggggg gtggccacgc cagcctgggt gagcagctgc cgggcctcgg
     2461 cctgggcggt gcgcagggtc tcccgcaggc ccttttcctc ttcgaccagg gcttcggtga
     2521 tatcggcgta gcgggtggtc tggaagaggg tctggaggat ggcctggcgc tcgctggagc
     2581 ccgcgagcat gaactcctgg aaccggccct ggggaagcag gaccacctgg cggaactggc
     2641 cggccttgaa gcccagcagg tcggccacct tggcatccac ggtggtgggc ttctccgtgg
     2701 ccaggggcac ctcggcgcca ttcaccagct cccacaggtg ggcggcatag ggctgcttct
     2761 tggtgccgcc gccgcgctgc ttgggcacct gctgctccgg ggcccgctcc acccggtact
     2821 tccggtcgcc cagggcgaag tcgaagacca cgcgggtggg ggcctccaca gcggcgaaat
     2881 ggctgcgcag gtcgcgggtc tcccggaggc cgccgctggt ctggccgtag agggcgtagc
     2941 tgatgccgtc gaggatgctg gtcttgcctg cccccgtggg gccgtggatg aggaagaagg
     3001 actgctcctt caggtcggcg aagtccaggt cctgacgccc cgcatagggg ccgaaggcct
     3061 cgagggtgag ccgcaggggt ttcactgggc accgtccccg gacaggctgc gtccggccac
     3121 ctcgcggaag agggtccgct cctcctcgtc catgtcccgg cccgcagtgt cgcggaagaa
     3181 ggcctcgaag agggtggcgg ggtccaggtc gcggtcggcg gcgcgcacgg tgtcctgggt
     3241 gggggccggt cccggcgggg cgggctggat gccgaggatg ttcgggtaga tctggcgcag
     3301 gcgggccatg gcgtccagca ctggaccttc gtccagcagg tcgaggaaga ggtagtcgtc
     3361 cgggttcccc tggggcccgc gcaggaggtc gtcgaagtgg ccgcgcaggc gccgcagctc
     3421 ccgccggggc gtgagggcca ggaactccgt ccgggcgggg ccgcggctgg ggagttccac
     3481 cagggtcagg cccttcacgt gggccgcttc ggaggcgctg tacttgagca ggctgccggc
     3541 atagcgcacg tgggcgaagc cggcctcctg ggggcggtgg aggtggccca gggccgcgta
     3601 gtcgcaggcc ttgaacagcg ccgcatccac ctcgccggtg ccgccgatgg ccagccccag
     3661 ttcggaatcc gagccttcgc ccccggccac gaaggcgtgg gccacggcca cgaagcggcg
     3721 gcccttggga tggctggccc gggcccgggc cagctgggcg gccagggcgt cctggtgggt
     3781 tcggatatcg tcctgctgga tcgcatggcg ggctgtggcg gggtccgcat agggcagcag
     3841 gtggaaggcc gcggacccga tgaggacggg gttggccgct tccagggggc ccaccacgtg
     3901 gaggccctgg gtctccagga atccggaggc gaagcccagg cgctcggggc tgtcatggtt
     3961 gcccgcgatg atcaggacgg ggacgccgag gccccgcacg atgcggtcca gggtgtcgtc
     4021 cagcagggcc acggcctcct tggggggcac ggcgcggtca tagaggtccc cggccaccac
     4081 cagggcctcg gcccgggtct ccttcaccat ggccgccacc tggtcgaggg cgtgggcctg
     4141 gtcgtccagg aggttcgcgt tgcagagggt cttgccgagg tgccagtcag aggtgtggag
     4201 gaatcgcatg gggttccgga agaggccagc aggggggcag gtgcgtcccg agtattgcac
     4261 cccggtgcgg gtccagtcat gcccagggcg cccgggaaca cgcctaactc atgttcccgg
     4321 accttcccgg ccgataggaa caggaccttt gttctggaaa ggagcggcct gtttcggccc
     4381 gccccgcttc cgccccggtc cagggaggcc catgttcagc cgcgcgatga ccaagggaaa
     4441 gtcgaaatcc gccgacagcc ccgctgccac ctgcctgggc gagggcaccc actggcaggg
     4501 ggagatccgg actggcgctg gcgacctgcg ggtggagggc accatggagg gcaccatcct
//
LOCUS       DASUDT010000357         2777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1762152, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000357 DASUDT010000000
VERSION     DASUDT010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762152"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..1116
                     /locus_tag="VFV26_07340"
     CDS             181..1116
                     /locus_tag="VFV26_07340"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846021.1"
                     /translation="MTHSSVPPLVDRHTHLEGALDPAWVRDEAGRRGLTLPGTLETLW
                     SGAAVPFEGFIEAFLFGAALLDGREAVREAVRALARRTLASGGAGFDLWASPHFLVVH
                     RGQITLDAFWRGLEEGLAEAQAQGLRGCVVLDAVNHFGPKHGHAVLDLVLPGLPPFVK
                     GFSTGGLEGCPFRDWAPVFERARAAGLRIAAHAGENGPGSNVREAVLEGGVERIVHGL
                     RADEATFDLLAERGVPVDVCPSSNRALAPDVAPHPLPRMLRAGVRCALGTDDPGVIPC
                     DLRTEWQAARAMGLGAPELAALARNSAEDAWCLQA"
     gene            1171..1247
                     /locus_tag="VFV26_07345"
     tRNA            1171..1247
                     /locus_tag="VFV26_07345"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1205..1207,aa:Arg,seq:tcg)
     gene            1272..1356
                     /locus_tag="VFV26_07350"
     tRNA            1272..1356
                     /locus_tag="VFV26_07350"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1306..1308,aa:Leu,seq:tag)
     gene            1443..>2777
                     /gene="tig"
                     /locus_tag="VFV26_07355"
     CDS             1443..>2777
                     /gene="tig"
                     /locus_tag="VFV26_07355"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEX4846022.1"
                     /translation="MSATLHHQSATRKAVEVTVPAAEVSAAFNEVVAKIAPKVRIPGF
                     RPGKAPRPVLMQKYAREIQSDVAQQLVEKHFWKAAQEAGALPISHPSLEKLDLKEGAD
                     AVFRAQFDVAPEVALPDYKAMVLTKKKRAIDEATVAEHLEGLRQRATKFLPVEDAVVA
                     QGLIATCDIRVKPQGLKAQTYSDQVLEIDGTRPFDAQLLGMKADEKKTFELSHPADDA
                     NTVLAGKTLAYEVHLKDLRRKEVPVLGDDFAKDMGAFEDLKALKAAVKKDLEEAAERD
                     AEARLHATMLDTLLDAAPFEVPRSMVGLQLDDYCQEFAQHVARQGMDPKKVNWQAYRQ
                     YRLNDAERAVRSGYLLQAIGNTEAIEVPEADIDNEIRAFMAENQVQQPFEAFKAELER
                     RGNATEIKGRLRTDRIFTHLLTTATVKEELLDKAAFEALVELERKREAGIPVN"
BASE COUNT          475 a         1002 c          887 g          413 t
ORIGIN      
        1 atggacgact acgacgaata ggcgaacccc gccggatcac gagcaaggct gcccaagcag
       61 cctgcgcagt gaggatccgg cgagggtgag catcatgtcc aagtcggccc ggttcattct
      121 cgtggccagg cccgcagcct gcgcagcgag gatccggcgt gcggtgagca taatgtccag
      181 gtgactcatt ccagcgtccc acctctcgta gaccggcaca cgcacctgga aggcgccctg
      241 gatcccgcct gggtccggga cgaggcgggg cgtcgcgggc tgacgcttcc cgggacactc
      301 gagaccctgt ggtccggcgc cgccgtcccc ttcgagggtt ttatcgaggc cttcctcttc
      361 ggggcggccc tgctcgatgg ccgggaagcc gtgcgcgagg cagtccgggc cctggcgcgg
      421 cgcaccctgg cctccggcgg agccggcttc gacctctggg cctcgcccca cttcctcgtg
      481 gtccaccgcg gccagatcac cctcgacgcc ttctggcggg gcctcgaaga gggcctggcc
      541 gaggcgcagg cccagggcct ccgaggctgc gtggtgctgg atgccgtcaa ccatttcggc
      601 ccgaagcacg ggcatgcggt cctcgacctg gtgcttccgg gattgccccc cttcgtgaag
      661 ggtttttcca ccggcggcct ggagggctgc cccttccggg actgggctcc cgtcttcgag
      721 cgagcccgcg ccgcgggcct gcgcatcgcc gcccacgcgg gcgagaatgg ccccggatcc
      781 aacgtccggg aagccgtcct ggaaggtggc gtcgagcgca tcgtccatgg tctccgggcg
      841 gacgaggcca ccttcgacct gctggccgaa cgcggcgttc ccgtggatgt ctgccccagc
      901 tcgaaccggg ccctggcccc cgacgtggcg ccccaccccc tcccccggat gctgcgggcc
      961 ggtgtgcgct gcgccctcgg caccgacgat cccggcgtca tcccctgcga cctgcggacg
     1021 gagtggcagg ccgcccgcgc catgggactc ggcgccccgg aactcgccgc cctggcccgg
     1081 aacagtgcgg aggatgcctg gtgcctccag gcctgaccga tccggggtcg aagcctcggc
     1141 gccttccagg tagactaggg gattcggtgc gcgcccatag ctcagctgga tagagcatca
     1201 ggcttcgaac ctgagggtcg ggcgttcgag tcgctctggg cgcaccaccg aaatgacaat
     1261 ttggcacccc tgcgagcgtg gcggaactgg tagacgcact ggatttaggt tccagcggtt
     1321 cacaccatgt cggttcgagt ccgaccgttc gcaccaactt cagaatcgcc gttggcgatt
     1381 ctgaagcatg gaaaagccga aaacctcctt cgcactctcc cacgcatcaa cacggagcat
     1441 ccatgtccgc caccttgcat caccagtccg ccacccgcaa agccgtcgaa gtgacggtgc
     1501 ccgccgccga ggtgagcgcc gccttcaatg aggtggtggc caagatcgcc ccgaaggtgc
     1561 gcatccccgg cttccgcccc ggcaaggccc cccgcccggt cctcatgcag aagtacgccc
     1621 gtgagatcca gtccgatgtg gcccagcagc tcgtggagaa gcacttctgg aaggccgccc
     1681 aggaggcggg ggccctcccc atctcccacc cctctctcga aaagctggac ctgaaggagg
     1741 gcgccgatgc cgtcttccgc gcccagttcg acgtggcgcc cgaggtggcc ctgcccgact
     1801 acaaggccat ggtcctcacc aagaagaagc gggccatcga cgaggccacc gtggcggagc
     1861 acctcgaggg cctccgccag cgcgccacca agttcctgcc cgtcgaggac gcggtcgtcg
     1921 cccagggcct gatcgccacc tgcgacatcc gcgtgaagcc ccagggcctc aaggcccaga
     1981 cctattccga tcaggtgctg gaaatcgacg ggacccgccc cttcgacgcc cagcttctcg
     2041 gcatgaaggc cgacgagaag aagaccttcg aactgagcca tcccgcggat gacgccaaca
     2101 ccgtcctggc cggcaagacc ctggcctacg aggtccacct gaaggatctc cgccgcaagg
     2161 aagtgcccgt cctgggcgac gatttcgcca aggacatggg tgccttcgag gatctgaagg
     2221 ccctgaaggc cgccgtgaag aaggatctcg aagaggccgc cgagcgcgac gccgaggccc
     2281 gcctccacgc caccatgctg gacaccctgc tggatgccgc gcccttcgag gtgccccgct
     2341 ccatggtggg cctccagctc gacgactact gccaggagtt cgcccagcac gtggcccgcc
     2401 agggcatgga tcccaagaag gtgaactggc aggcctaccg ccagtaccgc ctgaacgatg
     2461 ccgagcgcgc cgtgcggagc ggctacctgc tccaggccat cggaaacacc gaggccatcg
     2521 aagtgcctga agcggacatc gacaacgaga tccgcgcctt catggcggaa aaccaggtgc
     2581 agcagccctt cgaggccttc aaggccgagc tggagcgccg cggcaatgcc accgagatca
     2641 agggccgcct gcgcaccgac cgcatcttca cccacctgct caccaccgcc accgtcaagg
     2701 aagagctgct ggacaaggct gccttcgaag ccctggtgga actggagcgc aagcgcgagg
     2761 ccggcattcc cgtgaac
//
LOCUS       DASUDT010000358         3768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1055640, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000358 DASUDT010000000
VERSION     DASUDT010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055640"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VFV26_07360"
     CDS             <1..544
                     /locus_tag="VFV26_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX4846023.1"
                     /translation="LYIGAEAGTDELLAALNKGNDVNAIAHAIRLAREHDIVTEASFL
                     IGHPTETWESIERTIEVALRMNPDIAVFPVLTPMPFTPLYDELKDRVRVHDYSKYNLA
                     TPIIEPYAMTLEEVTIALGKCYMSFYAKKIPQIKALPDGFKRRYLLSACKEMMGAYGK
                     HFSHLGAKMPTMHPHPAVHS"
     gene            662..1435
                     /locus_tag="VFV26_07365"
     CDS             662..1435
                     /locus_tag="VFV26_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846024.1"
                     /translation="MPHAISLLFAASTLVGFTSNRPETALSTAATPPPAATSAPHATG
                     AQMPMGEALTGKVLERLDASPYCYLRLKTANKGEVWAAIPEAKAEKGSEVTIANAVLM
                     TNFESKTLKRTFAEVYFGTLPSTGAAAPSAGANPHAQGGQPAKTVKVGKVAKASGSDA
                     RTVSEIWAQKGGLKGKSVTLRGKVVKYSKGVMGKNWMHLQDGSGNKTKGTNDITVTSL
                     DEVSAGDTVTIKGLVNTNKDFGAGYSYAVIIEDAKVVKK"
     gene            complement(1454..2245)
                     /gene="mazG"
                     /locus_tag="VFV26_07370"
     CDS             complement(1454..2245)
                     /gene="mazG"
                     /locus_tag="VFV26_07370"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX4846025.1"
                     /translation="MEPTTLRAVMAALRKPETGCPWDLKQDHQSLARYLREEAAEVLD
                     ALAAHRPGDPATEAHLCEELGDLWLQIAFHAQLAADRGAWDFHEVERTVVEKLVRRHP
                     HVFAEVDVAGAEEVLTNWAAIKREEKGLAPEHEPRLLEGIPASLSPLEEALEIGRRCA
                     KVGFEWPDLEGVLDKVKEEVAELQAESDPVRVEEEFGDVLFSLMQWARKKGVDPDAAL
                     RRQMLRFRARFRHVEDDARAAGGWENRDLDQMEAAWQLAKEKVKQ"
     gene            complement(2363..>3768)
                     /locus_tag="VFV26_07375"
     CDS             complement(2363..>3768)
                     /locus_tag="VFV26_07375"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HEX4846026.1"
                     /translation="VPEDLADGLGLGRLHFAGVAGSGMSALAQFVAMKGGRASGSDRS
                     FDRGQRFDARRHLEDLGVVIHPQDGSGLEGAGLEGCAALVVSTAVEDEVPDVATARRL
                     GVPVLHRSELLAHLVARYRTVAVTGTSGKSTTTAMIFEILRGAGLDPSVITGGELVAL
                     QREGRWGNAWAGSSDLLVIEADESDGSVVRYHAAVGVILNLQKDHKEMDAVAAMFRAF
                     RTQVREAAVVGEAENLREFAVGATTFGFEGGGGLRAEGLGLGAESSAFRVGGKNFVIP
                     ATGAHNVENALAAIAACAALGVPLEDMIAPLAGFQGVARRFQVLGTRRGVTVVDDFGH
                     NPAKVTASIRAAHLRAGRVLAVFQPHGFGPLKFLRAEFVGAFATELAPMDRLWFLDVF
                     YAGGTAAKDITSGEVVADIAARGVAAELAPSREWLVERLATEAREGDLILVMGARDPS
                     LTDLAKAILEGLPALKR"
BASE COUNT          664 a         1390 c         1139 g          575 t
ORIGIN      
        1 cctgtacatc ggcgcggagg ccggcaccga cgagctgctg gcggccctga acaagggcaa
       61 cgacgtgaac gccatcgccc acgcgattcg tctggcccgg gagcacgaca ttgtcaccga
      121 ggcctccttc ctgatcggcc accccaccga gacctgggaa tccatcgaga ggaccatcga
      181 ggtggccctc cgcatgaacc ccgatatcgc ggtgttcccg gtgctcaccc cgatgccctt
      241 cacgccgctc tacgacgagt tgaaagaccg ggtgcgcgtc cacgactact cgaagtacaa
      301 cctggccacg cccatcatcg agccctacgc catgaccctc gaggaggtca ccatcgccct
      361 cggcaagtgc tacatgagct tctacgcgaa gaagatcccg cagatcaagg cccttccgga
      421 tggattcaag cgccgctacc tcctcagcgc ctgcaaggag atgatgggcg cctacggcaa
      481 gcatttcagc caccttgggg cgaagatgcc cacgatgcac ccccatccgg ccgtccattc
      541 ctgaaaaccc cggatccgga tgggctctgc cctggcaagg gcactcgcac cagacgaacg
      601 gcgttccacc ctcagctcga ccttccgtga tttgttccca attcccacca tgagttcccc
      661 catgccccat gccatttcgc ttctcttcgc cgcttccacg ctggtgggct tcacctcgaa
      721 taggccggaa accgcccttt cgacagccgc cacgcccccc ccggccgcga cttccgctcc
      781 ccatgccacg ggggcccaga tgcccatggg cgaagccctg acaggcaagg tgctggagcg
      841 cctcgacgcc tcgccctact gctacctccg cctgaagacc gccaacaagg gcgaggtgtg
      901 ggccgccatc cccgaggcca aggccgagaa gggctccgag gtcaccattg ccaacgccgt
      961 gctgatgacg aatttcgaat ccaagaccct gaagcggacc tttgccgaag tgtacttcgg
     1021 caccctcccc tcaacagggg ccgcggctcc gtcggccggt gccaaccccc acgcccaggg
     1081 aggccagccc gccaaaaccg tgaaggtcgg gaaggtggcg aaggcttccg gctcggatgc
     1141 ccgcaccgtc tccgaaatct gggctcagaa gggtggcttg aaagggaaga gcgtcaccct
     1201 gcgcggaaaa gtcgtgaagt acagcaaggg tgtcatgggc aagaactgga tgcaccttca
     1261 ggacggcagc ggcaacaaaa caaagggcac caatgacatc accgtcacca gcctggacga
     1321 ggtgtccgcg ggcgataccg tgaccatcaa gggcctggtc aataccaaca aggacttcgg
     1381 tgccggctac agctacgccg tgatcatcga agacgcaaaa gtggtcaaga agtaggaagc
     1441 agcatcgggt ccatcactgt ttcaccttct ccttcgccaa ttgccaggcc gcttccatct
     1501 gatcgagatc ccggttctcc cagccccctg cggcccgggc atcgtcctcc acgtgccgga
     1561 agcgcgcgcg gaagcgcagc atctggcgcc gcagggcggc gtccggatcc actcctttct
     1621 tccgcgccca ctgcatgagg ctgaagagca cgtcgccgaa ctcctcctcc acgcggacgg
     1681 gatcggactc ggcctggagc tccgccacct cctccttcac cttgtcgagg acaccctcca
     1741 gatccggcca ctcgaagccc accttggcgc agcggcggcc gatctccagg gcctcctcca
     1801 ggggcgatag cgaggccgga atgccctcca gcaggcgcgg ttcgtgctcc ggagccaggc
     1861 ccttctcctc gcgcttgatg gcggcccagt tggtgagcac ctcctcagcg cccgccacgt
     1921 cgacctccgc gaagacatgc ggatgccgcc gcacgagctt ctccacgacc gtgcgctcca
     1981 cctcgtggaa gtcccaagcg ccccggtccg ccgccagctg ggcgtggaag gcaatctgca
     2041 gccagaggtc gcccagctcc tcacagaggt gcgcctccgt ggccggatcg ccgggccggt
     2101 gcgccgccag ggcgtccagc acctccgccg cctcctcccg caggtagcgg gccaggctct
     2161 ggtggtcctg cttcagatcc caggggcagc ccgtctccgg cttgcggagc gcggccatga
     2221 cagcgcggag ggtggtcggt tccatgcctt gagggtaccg cgagaggaag gcttttgatt
     2281 gaaaccgcag atggcgcaga tttcgcagat ggtggaatcc ttttcatctg tgccatcggc
     2341 gtcatctgcg gttaaagaat cattatcttt tcaaggcggg cagcccctcc aggatggcct
     2401 tggccaggtc cgtcaacgag ggatcccgcg cccccatcac gaggatgaga tcgccctccc
     2461 gggcctcggt ggcgaggcgc tccaccagcc attccctcga tggtgcgagt tctgcggcca
     2521 cgccccgggc ggcgatgtcg gcgacgacct cgccgctggt gatgtccttg gcggcggtgc
     2581 cgccggcgta gaacacgtcc aggaaccaga gccggtccat cggcgccagc tccgtggcga
     2641 aggcccccac gaactcggcc cggaggaact tcagcgggcc gaaaccgtgg ggctggaaga
     2701 ccgccagcac gcgccccgcc cgcaagtggg cggcccggat ggaggccgtc accttcgcag
     2761 ggttatggcc gaagtcgtcc accacagtga cgccgcgccg tgtgcccagc acctggaagc
     2821 ggcgcgccac accctggaaa ccggccagcg gcgcgatcat gtcctccagc ggcaccccca
     2881 gcgccgcaca ggctgcgatg gccgccaggg cgttctccac gttgtgagcc ccagttgcag
     2941 ggatgacaaa attcttcccc cctacgcgga aagcggagct ttccgcgcca agcccaaggc
     3001 cttcggcccg caagccaccc cccccctcga acccgaaagt ggttgcgccc acagcaaact
     3061 cgcgcaggtt ctccgcctcg cccaccaccg cggcctcgcg cacctgcgtc cggaaggcgc
     3121 ggaacatcgc cgccacagcg tccatctcct tgtggtcctt ctggaggttc aggatgacgc
     3181 ccacggccgc gtggtagcgc accacggagc cgtcgctttc gtcggcctcg atgaccagca
     3241 ggtccgagga tccggcccag gcgttgcccc agcggccttc gcgctggagg gccaccagct
     3301 cgccgccggt gatgaccgag ggatcgaggc ccgctccgcg caggatctcg aagatcatgg
     3361 ccgtggtggt ggacttgccg ctggtgcccg tgacggccac cgtgcggtac cgcgccacca
     3421 ggtgcgccag cagctccgag cggtgcagca cgggcacgcc caggcgccgg gccgtggcca
     3481 cgtccggcac ctcgtcctcc acggccgtgg acaccaccag ggccgcacac ccctcgagcc
     3541 cggcgccttc caggcccgag ccgtcctggg gatggatcac cacgcccagg tcctccagat
     3601 gccgacgcgc atcgaatcgc tggccccggt cgaagctgcg gtcgctgccg ctggcccgcc
     3661 cgcccttcat ggccacgaac tgggccaagg cgctcatgcc gctgcccgcc acccccgcga
     3721 agtgcaggcg gcccaggccg aggccatccg ccagatcctc ggggacca
//
LOCUS       DASUDT010000359         5042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1673993, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000359 DASUDT010000000
VERSION     DASUDT010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5042
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673993"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..505)
                     /locus_tag="VFV26_07380"
     CDS             complement(<1..505)
                     /locus_tag="VFV26_07380"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4846027.1"
                     /translation="MGHRNLRFAAIMGLHTFISAGTFLLGKAAADAMPTLALGLFRFL
                     IAGAGFLLLARIRGLELWPVAKAEWRAYLWAGFLGVALNQIAFLGGLALTLPSHAALM
                     YALTPTVVLLLAWARGQERPGPRKLAGLALAFSGVVVLFSGKAGGALPPHWVLGDLLV
                     LVAVIAWA"
     gene            594..1601
                     /locus_tag="VFV26_07385"
     CDS             594..1601
                     /locus_tag="VFV26_07385"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEX4846028.1"
                     /translation="MAVTKTPRKKPLSAAPAEESEPVKAKAAPARKAAAKKADAVEPK
                     VKAAKGAAKGKAAKAVEPEPVAAPPLPEPQPMAKKATAAEVSRLVDALLAAIREGRAV
                     EFIFADSDANAPRTFEPRQLTFDALSQAWYVWGWDRRYNAERHHRVDLLAEVNEVEGA
                     GRAAQGPYPEGTPANQIGGWLGGEAIAVKATLLKQWVFAVKQAPPAFPHFKLEEQGDG
                     QALVTFSATDLRAIARWAMQFGDGIQVLEPARLVDRIKQVGAVWAGRERQAAPVSAPK
                     PTPRHEAEPRRSESRHHAEPKPEARPEPRPHREPRHERERDEAPKAKPGKVEVIRFDR
                     L"
     gene            complement(1614..3188)
                     /locus_tag="VFV26_07390"
     CDS             complement(1614..3188)
                     /locus_tag="VFV26_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4846029.1"
                     /translation="MRWRSLILPLLLLCGLRAEEPIRVAMDTWTTLNPLLMSRDTDME
                     AVDLMFDRLVDMDAKGNFIPGLLQDWTVLKGGREVLLQLRPGMTWHDGSPIEAEDLVF
                     TWRMLRLPQVRALADTVGGVASLDSLVAEGPLRVRIRLARPRGALLSDLYSFIPVPRR
                     HYQVGAKPQAATVNFQPVGSGPYRVVGRATTKQLRVERWDGYRGAHPGLWPAFEFTDP
                     SQEKAMIPAVLEGRYHYARTGGLSHYLVRKGVRGEGRLQAHAVPQAAFGAFFLNCDPK
                     RSLLGELALRQALAELVPWQEFARARRFFPTRLASSFWPPESWAHDPTPRPLPNSDRA
                     STILDAAGWRPGPDGVRQDRHGRRLALVAYESGGAATRTAARLLAERAAGVGMRIEVR
                     QLSFEALTEISTRHEGDLWSYGWGVALDPDVDSPLFTRDGYRTGANVSGYLNPEVERL
                     FDEGRHTLDPVARRKIYLKLSEIIWRDKPVIPLNYNLARVLADHRLKGVAFNVLGQSH
                     GFWPGRRGWKLEGARP"
     gene            complement(3229..3798)
                     /locus_tag="VFV26_07395"
     CDS             complement(3229..3798)
                     /locus_tag="VFV26_07395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX4846030.1"
                     /translation="MKAAILALGTVGALAQTPPIAPPLPPAQPGGLHCDPKDKLPLLL
                     GPATAQEILAHRAIFRDTLAKAPLSGGLKARWKAVKRPFTLVAVFGSWCGDSHYQLPD
                     LLALEAEPNPFIEVHYLGVYRDKQVPAAQWPAGCPAQKVLRVPTFYLFATQPGGGQKL
                     VGTVVENPPRAGQRMAEALVELVEAASTQ"
     gene            3883..4389
                     /locus_tag="VFV26_07400"
     CDS             3883..4389
                     /locus_tag="VFV26_07400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX4846031.1"
                     /translation="MKISARGRYSMQALFDLAHHSHGQPVPLHVIAERQKLSLPFLEQ
                     IFNKLKKAGVVASVRGPKGGYILTRPCNQVSVGEILRLTDSSFYAVAKEDPKAANKIL
                     MADERMSRMLWNRLSDHISAFMEKVTFADLCSETSSNTCPDCTCPEYVKDVQGQLVRG
                     ERKACGVM"
     gene            4394..>5042
                     /locus_tag="VFV26_07405"
     CDS             4394..>5042
                     /locus_tag="VFV26_07405"
                     /inference="COORDINATES: protein motif:HMM:NF013348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4846032.1"
                     /translation="MSNPCALPSLALPPTEDDLKTLPRLEKKLARRLGETNAAYKLIE
                     DGDRILVAVSGGKDSWALLDVLERLRKRAPVTFQVEAVTVDPGFPQFNPDPIAEVCER
                     LGVPHHIIPAPIDKMVRSKPEELPCIICSRLRRGVLYSFAKQHGYTKIALGHHLDDLI
                     ETLLINLFFEGRLSTMPLRLVSDDGANTVIRPLGTCEEKDLQRYAWLRGFPIVPCG"
BASE COUNT          856 a         1824 c         1689 g          673 t
ORIGIN      
        1 ccgcccaggc tatgaccgcc accaggacca ggagatcccc cagaacccag tggggcggca
       61 gcgccccgcc ggccttgccc gaaaagagca ccaccacccc ggaaaaggcc agggccaatc
      121 ccgcgagctt gcgcggcccc ggccgctcct gcccccgggc ccaggccagc agcagcacca
      181 cggtgggggt cagggcgtac atcagcgccg cgtgcgaggg gagcgtcagg gccagacctc
      241 ccaggaaggc gatctggttc agggccacgc ccaggaaccc ggcccagaga taggcgcgcc
      301 attcggcctt cgccacgggc cagagctcca gcccccggat ccgtgccagc agcaggaatc
      361 ccgccccggc gatgaggaac cggaaaagcc ccagggccag ggtcggcatg gcgtccgcgg
      421 cggctttccc caggaggaag gtcccggcgg aaatgaaggt gtgcagcccc atgatggcgg
      481 cgaagcggag gttgcgatgg cccatgtccc aagcatggca cctgccgcgg ccgaactggg
      541 cggtggaccg cccccgctcg aatgggggat gatgggccag gagttcccta cccatggccg
      601 tgacgaagac cccccgaaag aagcccctta gcgccgcccc cgcggaagaa tccgagcccg
      661 tcaaggccaa ggccgcccct gccaggaagg ccgcggcaaa gaaggccgac gcggtggaac
      721 ccaaggtgaa ggccgccaag ggcgcggcga agggcaaggc cgccaaggcc gtggaacccg
      781 agcccgtggc cgccccgccc ctgccggaac cccagcccat ggcgaagaag gccaccgccg
      841 ccgaggtatc ccggctggtc gatgcgctcc tggccgccat ccgggagggc cgcgccgtgg
      901 agttcatctt cgcggactcg gacgccaacg ccccccgtac cttcgaaccc cggcagctca
      961 ccttcgatgc cctcagccag gcctggtacg tctggggctg ggaccgccgc tacaacgccg
     1021 agcgccacca ccgcgtggac ctgctggccg aagtgaacga ggtggaaggc gcgggccggg
     1081 ccgcccaggg cccctatccc gagggcaccc ccgccaatca gatcggcggc tggctgggcg
     1141 gcgaggccat cgccgtgaag gccaccctgc tcaagcagtg ggtcttcgcg gtaaagcagg
     1201 cccctcccgc cttcccccac ttcaagcttg aggagcaggg cgacggacag gccctcgtga
     1261 ccttctcggc cacggacctc cgcgccatcg cccgctgggc catgcagttc ggcgacggca
     1321 tccaggtgct ggaacccgcc cgcctggtgg accgcatcaa gcaggtgggc gccgtctggg
     1381 ccggccggga gcgccaggcc gcgcccgtct ccgcccccaa gcccacgccc cgccacgaag
     1441 cggagccccg ccggtccgag tcccgccacc acgcggaacc gaagcccgaa gccaggcctg
     1501 agccccgccc ccaccgcgag ccgcgccatg aacgcgaacg ggacgaggcc cccaaggcca
     1561 agcccggcaa ggtggaagtc atccgcttcg accgcctctg atccgcacgc cgttcagggg
     1621 cgggcgccct ccagtttcca cccccgccgg ccgggccaga atccatggga ctggcccagg
     1681 acgttgaagg ccacgccctt gagccggtgg tccgccagca ctcgggccag gttgtagttc
     1741 agggggatca cgggcttgtc gcgccagatg atctccgaca gcttcaggta gatcttccgg
     1801 cgggccaccg gatccagcgt gtgccgtccc tcgtcgaaga gccgttccac ctcgggattc
     1861 aggtagccgc ttacgttcgc cccggtccgg tagccatccc gggtgaagag ggggctgtcc
     1921 acatcgggat cgagggcaac cccccagccg taggaccaga ggtcgccctc atgccgggtc
     1981 gagatctccg taagcgcttc gaaactcagc tggcggacct cgatgcgcat gcccaccccc
     2041 gcggcccgct ccgccagcag gcgggccgcg gtgcgggtgg cggcaccgcc ggactcatag
     2101 gcgaccaacg ccaacctgcg accatggcgg tcctgccgga cgccatccgg cccaggcctc
     2161 cagcccgcgg catccaggat ggtcgaagcc cgatcggaat tgggaagggg tctcggcgtg
     2221 ggatcgtggg cccagctctc cggcggccag aaggacgaag ccagccgggt ggggaagaac
     2281 ctccgggccc ttgcgaattc ctgccagggc accagctccg ccagagcctg ccgcagggcc
     2341 agctccccga ggaggctgcg cttgggatcg cagttcagga agaaggcccc gaaggcggcc
     2401 tggggcacgg cgtgggcctg caggcgccct tcgccgcgga cccctttccg caccaggtaa
     2461 tgagagagcc cgccagttcg ggcgtagtgg tagcgccctt ccaggacggc cgggatcatg
     2521 gccttctcct gggagggatc cgtgaactcg aaggcgggcc acaggcccgg atgggcccca
     2581 cggtagccgt cccagcgttc gacccgcagc tgcttcgtgg tggcccggcc caccacccgg
     2641 tagggacccg agcccacggg ctggaaattc acggtggcgg cctggggttt cgcccccacc
     2701 tggtagtggc ggcggggcac ggggatgaag ctgtacagat ccgacagcag ggccccccgg
     2761 ggcctggcca ggcggatcct cacccgcagc gggccttcgg ccaccaggct gtccaggctg
     2821 gccacgccgc cgaccgtatc cgccagcgcc cggacctggg gcaggcgcag catccgccag
     2881 gtgaagacca ggtcctcggc ctcgatgggg ctgccgtcgt gccaggtcat gcccggccgc
     2941 agctggagca gcacctcgcg cccacccttc aggaccgtcc aatcctgcag cagccccgga
     3001 atgaaattcc ccttggcatc catgtccacc aggcggtcga acatcaggtc gaccgcctcc
     3061 atgtccgtgt cccgggacat gagcaggggg ttcagggtag tccatgtgtc catggccacg
     3121 cggatgggtt cctccgcgcg gaggccgcag agcaggagca gtgggaggat cagggagcgc
     3181 cagcgcatcg tgccccctcc atcggccaac ccgggggcgg gctgaaatct actgggtaga
     3241 agcggcctcc accagctcca ccagggcctc cgccatgcgc tggccggccc tcgggggatt
     3301 ctccaccacc gtccccacca gcttctgccc cccgccgggc tgggtggcga agaggtagaa
     3361 ggtcgggacc cgcagcacct tctgggccgg acagcccgca ggccactggg ccgcggggac
     3421 ctgcttgtcc cggtagacgc ccaggtagtg gacctcgatg aaggggttgg gttccgcttc
     3481 cagggccagc agatccggca gctggtagtg gctgtcgccg caccaggagc cgaacaccgc
     3541 caccagggtg aagggccgct tcacggcctt ccagcgggcc ttcagcccgc cggacagggg
     3601 agccttggcc agggtgtccc ggaagattgc ccggtgggcg aggatctcct gggccgtcgc
     3661 cggtcccagc agcaggggca gcttgtcctt gggatcacag tggaggcccc cgggctgggc
     3721 cggggggagg gggggggcga tggggggcgt ctgggccagg gcacccacgg ttccgagggc
     3781 caggatggcg gctttcatgg gattctcctg ggtccagtgt agcggcgcga taaacttgac
     3841 tcgtttgctc aggaatacta acctggaacc tggagaaccg ccgtgaaaat ctcggcccga
     3901 ggcaggtaca gcatgcaggc cctgttcgac ctggcccacc acagccacgg ccagccggtg
     3961 ccgctgcatg tgatcgccga gcgccagaag ctctccctgc ctttcctcga gcagatcttc
     4021 aacaagctca agaaggccgg cgtcgtggcc agcgtgcgcg gccccaaggg cggctacatc
     4081 ctcacgcggc cctgcaacca ggtgagcgtg ggcgagatcc tgcgcctcac ggacagcagc
     4141 ttctacgccg tggccaagga ggatcccaag gccgccaaca agatcctcat ggccgacgag
     4201 cgcatgagcc gcatgctctg gaaccgcctg tccgaccaca tttccgcctt catggagaag
     4261 gtgaccttcg ccgacctctg ttcggaaaca tccagcaata cctgcccgga ctgcacctgc
     4321 cccgaatacg tgaaagacgt ccagggccag ctggtgcggg gcgagcgcaa agcctgcggc
     4381 gtgatgtagc gccgtgagca atccctgcgc cctgcccagc ctggccctgc cgcccacgga
     4441 ggatgacctc aagaccctgc cccggctgga gaagaagctt gcccgccgtc tgggtgagac
     4501 gaatgccgcc tacaagctca tcgaagacgg cgaccgcatc ctggtggccg tgagcggcgg
     4561 caaggattcc tgggccctgc tggacgtgct ggagcggctg cgcaagcggg ctcccgtgac
     4621 cttccaggtc gaagccgtca cggtggatcc gggcttcccc cagttcaacc ccgaccccat
     4681 cgccgaggtg tgcgagcggc tcggagtgcc ccaccacatc atcccggccc ccatcgacaa
     4741 gatggtgcgc agcaagcccg aggagctgcc ctgcatcatc tgctcgcggc tgcggcgggg
     4801 cgtgctctac tccttcgcca agcagcacgg ctacacgaag atcgcgctgg ggcaccacct
     4861 ggacgacctc atcgagaccc tgctcatcaa cctcttcttc gagggccgcc tcagcaccat
     4921 gcccctgcgc ctggtgagcg acgacggcgc caacaccgtc atccgccccc tgggcacctg
     4981 cgaggagaag gatctccagc gctacgcctg gctgcggggc ttccccatcg tgccctgcgg
     5041 ct
//
LOCUS       DASUDT010000360         4150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_238020, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000360 DASUDT010000000
VERSION     DASUDT010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238020"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            244..1146
                     /locus_tag="VFV26_07410"
     CDS             244..1146
                     /locus_tag="VFV26_07410"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HEX4846033.1"
                     /translation="MTAIRRWIPLFLVGSALLAQAPPPPPPPAPPAPPAPTLGVDLPS
                     ASRTEQRTEKLAYGSKLWVKNRNGGIRVTGWDKEEVFLTAQIRDSEKRKIELLVQRKG
                     EDLDIEAMFQQPSWSFGVYISPRCEMTLQVPRRVLGHFRTTNGTVAAEHLEGYARCEA
                     TNGAILVTDVRGEVHVDTTNGPIEARNLSARIKGSTTNGRIILEDVLGGIRLETTNGS
                     IRARNLDGWGEGIFLESTNGSIEVELGKAGGDLLAENSNGSLDIKVPGAQVIEITKHN
                     AHVKVPGRTQTIRLETTNGSIRVK"
     gene            1167..2828
                     /locus_tag="VFV26_07415"
     CDS             1167..2828
                     /locus_tag="VFV26_07415"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX4846034.1"
                     /translation="MRPLVPILLAALSLHAQGPRLAEVQERRLSNGIRVLLVERRDLV
                     AFHAAMILRGGRAEEPPALAGANDLVARALFGQTRPEDLDAAKGPGSLDALLQEEEGL
                     LESLRQEELRRRKDPASTSQAPALEAALQNLRKSLKARFSAAPLSDLYAARGGRQTAS
                     ASADALLVQTELPASAFEFWCRTEAQRLSILQLSRFSEARAALAAELRAQGPQSLALL
                     RGAALPGHPYGRDLADHLPALEAMRRSDLRAWARQAFRPDRLALVLVGGIGMETALPL
                     IERTFGALPAAGGGEDPLLPEIPADLGDRRIQAALGGTSTLVVGWRIPARTHRDHLAL
                     RMAAQLLGAGPSGRLAQKLVRQKGLAQGVEIGLDVPGGRLPGLLMASLAPADGKSLAE
                     LEAALHTEILRLQQEPIPTDEWQRALTQLDVEQLRIQDEPGALARTLGLAWAEAGDWR
                     QADLELQRLRNLGPETVQAAARAWLKPSHRTTLWLQPGTDEGQDPLEIETARVLKALA
                     ASRIEDLAQREHMVSEGLRQLRMLSLEERRRTLQLLTAQLAPEKR"
     gene            2825..4027
                     /locus_tag="VFV26_07420"
     CDS             2825..4027
                     /locus_tag="VFV26_07420"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX4846035.1"
                     /translation="MKPLAALAALTFAAQLQGQLQAQAPLRTQAFSLPNGLRVVLLED
                     HERPLVRARLHLPLEPAQGADRPGLGPLARRMLARSDAGNLKAEEFHQILARAGIELA
                     PSLRAEGLRWNLVARSRDQDLALGLLADRVLRPLFEPAILEAERLACWRDIERLTASP
                     QGKLRQALEPDWTLQVPSLDSLTAVTFEDLQAFFVRVSRPDRAVLILHGDLGKEQAMR
                     LVFQTFGTWTAQPAPDLPAPAPPQADRIQAPASGSPPWALAVAAAPPDLSPETGALLA
                     LLLAEDPALSPAQLRVEGSDLVASLEGMPGSDVATLLMDRLQALRQRGYTESDLRRAR
                     TAWSAGSALVALHPEALMDQAVAEARQRAATPARMEALTVDALNDALRRWLDPARIHA
                     GALTAPAR"
BASE COUNT          627 a         1604 c         1375 g          544 t
ORIGIN      
        1 acctggtcgg cggccactcc ggcccgggcc agggcctcgg cgatggcgag cgcgcccatc
       61 tggacggcat tcaagggctt gagggcgccc ccgaaggagc ccacggcggt acgggtggca
      121 gacaggatgt aggcagacat ggcggactcc ggggggacct tccagggtat cgtgactaaa
      181 cgccactgtc ccaggaccgt gaactccaca cccaggcaag ccctggttct ttcgagagct
      241 gccatgaccg ccattcgccg ctggatcccc ctgttcctgg tcgggagcgc cctgctggcc
      301 caggcgccgc cgcctccccc gccgcccgcg cccccggccc ccccggcgcc cacgctcgga
      361 gtggacctgc cctccgcctc ccggacggag cagcgcaccg agaagctggc ctacggctcg
      421 aagctctggg tgaagaaccg caatggcggc atccgcgtga cgggctggga caaggaggag
      481 gtcttcctca ccgcccagat ccgggacagc gagaagcgca agatcgagct gctggtccag
      541 cggaagggcg aggacctgga catcgaagcg atgttccagc agccctcctg gagcttcggc
      601 gtctacatca gcccccgctg cgaaatgacg cttcaggtgc cccgcagggt cctgggccat
      661 ttccgcacca ccaacggcac cgtggccgca gagcatctgg agggctacgc ccgctgcgag
      721 gccaccaacg gcgccatcct ggtgaccgat gtgcggggcg aggtccacgt ggacaccacc
      781 aacggcccca tcgaggcccg gaacctctcg gcccgcatca agggcagcac caccaacggc
      841 cgcatcatcc tcgaagacgt cctggggggc atccgcctgg agaccaccaa cggcagcatc
      901 cgcgcccgga acctggatgg ctggggcgaa ggcatcttcc tggaatccac caacggcagc
      961 atcgaggtgg agctgggcaa ggccgggggc gacctgctgg ccgagaacag caacggatcc
     1021 ctggacatca aggtccccgg cgcccaggtc atcgagatca ccaagcacaa cgcccacgtg
     1081 aaggtgccgg gccggaccca gaccatccgg ctggagacca ccaacggcag catccgcgtg
     1141 aaataggaag tagtactctg gggaccatgc gccccctggt ccccatcctt ctcgccgccc
     1201 tgagcctgca cgcccagggg ccccgcctcg cggaggtcca ggaacgccgc ctgtcgaacg
     1261 gcatccgggt cctgctggtg gagcggcggg acctggtcgc cttccatgcg gccatgatcc
     1321 tccggggcgg acgcgccgag gagccccccg ccctggccgg ggccaatgat ctggtggcca
     1381 gggccctctt cgggcagacc cggcccgagg acctggatgc cgccaagggg cccggctctc
     1441 tggatgcgct gctccaggag gaggagggcc tcctcgaatc cctgaggcaa gaagagcttc
     1501 gccgccggaa ggaccccgcc tcgaccagcc aggctccggc cctggaggcc gccctccaga
     1561 acctgcgcaa gagcctgaag gcgcgtttct ccgcggcgcc cctctcggat ctctacgccg
     1621 cccggggcgg gcgccagacc gccagcgcca gcgcagatgc cctcctggtc cagaccgaac
     1681 ttcccgcgag cgccttcgaa ttctggtgcc gcaccgaggc ccagcgcctg tccatcctcc
     1741 agctcagccg cttctccgag gcccgggccg ccctggctgc ggagctgcgc gcccagggcc
     1801 cccaaagcct tgccctgctc cggggcgcgg ccctgcccgg ccatccctac ggccgcgatc
     1861 tcgcagatca tctgccggcc ctggaggcca tgcgccgttc ggacctccgc gcctgggcgc
     1921 ggcaggcctt ccggcccgac cggctcgccc ttgtgctcgt gggcggcatc ggaatggaga
     1981 cggcgctgcc cctgatcgag cgcaccttcg gcgccctgcc cgccgccggc gggggcgagg
     2041 atcccctgct gcccgagatc cccgcggacc tgggcgaccg gcgcatccag gccgccctcg
     2101 gcgggacctc caccctggtg gtgggctggc gcatccccgc ccggacccac cgggaccacc
     2161 tggccctgcg catggccgct cagctcctgg gggccggccc ctccggccgc ctggcccaga
     2221 agctggtccg gcagaagggc ctggcccagg gcgtggagat cggactggac gtgccggggg
     2281 gccggctgcc gggtctcctg atggccagtc tggctcccgc cgacgggaaa tccctggcgg
     2341 aactggaggc cgcactccac acggagatcc tgcggcttca gcaggagccc atcccaaccg
     2401 acgaatggca gcgcgccctg acccaactcg acgtggaaca gctgcggatc caggacgaac
     2461 ccggagccct ggcccggacc ctgggcctcg cctgggccga agccggcgac tggcggcagg
     2521 cggatctgga gctgcagcgc ctgcggaacc tcggccccga aaccgtccag gcggccgccc
     2581 gggcctggct caaacccagc catcggacca ccctctggct gcaacccggc accgacgaag
     2641 ggcaggatcc cctggagatc gagacggccc gggtgttgaa ggccctcgcc gccagccgca
     2701 tcgaggatct cgcccagcgg gaacacatgg tctccgaagg cctccgccag ctgcgcatgc
     2761 tcagccttga agagcgccgc cgcaccctcc agctgctgac ggcccagctg gccccggaga
     2821 agcgatgaag cccttggcgg ccctggccgc cctgaccttc gccgctcaac tccagggcca
     2881 gctccaggcc caggccccgc tccggaccca ggccttcagc ctgcccaacg gcctgcgcgt
     2941 ggtcctcctg gaagaccacg aacgccccct ggtgcgagcc cggctgcatc tgcccctgga
     3001 gcccgcccag ggagccgatc ggccggggct tggccctctc gcccggcgca tgctggcgcg
     3061 ctcggacgcc ggcaacctca aggccgagga gttccaccag attctggcgc gggcgggaat
     3121 cgaactggca ccatcgcttc gcgccgaggg gctccgctgg aacctggtgg cccggagccg
     3181 ggaccaggac ctcgccctgg ggctgctcgc ggaccgcgtc ctgcggcccc tcttcgaacc
     3241 cgccatcctg gaggccgagc gactggcctg ctggcgcgac atcgaacgcc tcacagcctc
     3301 gccccagggg aagctccgcc aggccctgga gccggactgg accctccagg tgcccagcct
     3361 ggacagcctg acggctgtca cgttcgagga tctccaggcc ttcttcgttc gggtttcccg
     3421 cccggaccgt gccgtgctga tcctccatgg cgacctcggg aaggagcagg ccatgcggct
     3481 cgtcttccag accttcggca cctggacggc ccagccggcc cccgacctgc ctgctcccgc
     3541 ccccccccag gctgaccgga tccaggcccc ggcctccggg agcccaccct gggcgctggc
     3601 ggtggccgcg gccccccccg atctcagtcc cgagaccgga gcgctgctgg ccctcctcct
     3661 ggcggaggat ccggccctgt ccccggcgca gctccgggtg gagggctccg atctggtggc
     3721 cagcctggaa ggcatgccgg gatcagacgt cgcgacgctc ctgatggatc ggctccaggc
     3781 cctccggcag cgcggctaca cggaatcaga tctgcgccgg gcccggaccg cctggtccgc
     3841 aggcagcgcc ctcgtggcgc tccatcccga ggccctcatg gatcaggccg tggccgaggc
     3901 ccgccagcgc gcagccactc cggcccgcat ggaagccctc accgtcgacg ccctgaacga
     3961 tgcgctccgc cgctggctcg atcccgcgcg gatccacgcc ggagcattga ccgccccggc
     4021 gcgctgatct ggaaccgcac tctagatgct caccccgaac cgggacgcca ggtccaggta
     4081 gcgggcccgg atgccttcga tgatggcggg aggcagatgg ggggccgggg gctgcttgtc
     4141 ccagtccacg
//
LOCUS       DASUDT010000361         3890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_370892, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000361 DASUDT010000000
VERSION     DASUDT010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370892"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VFV26_07425"
     CDS             <1..460
                     /locus_tag="VFV26_07425"
                     /inference="COORDINATES: protein motif:HMM:NF040196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5777 family beta-barrel protein"
                     /protein_id="HEX4846036.1"
                     /translation="RFRLAARIERFDETIQRTTYAFGTVGLTGAAFQLPAELAVGPLT
                     ICLVPTWLSRTTTRDRALITAGAGLRWRVLDGQSILAEYYPRPSRLDRATYEGGFALG
                     YRFQTRGHRFTLLATNVQGTTAHQVLSGDYAGGPRAPGQWALGFNLVRIF"
     gene            complement(625..2556)
                     /gene="acs"
                     /locus_tag="VFV26_07430"
     CDS             complement(625..2556)
                     /gene="acs"
                     /locus_tag="VFV26_07430"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001208.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX4846037.1"
                     /translation="MSDVEISITQQKTIQALQKGEAPIPMRGWLAKQAAINYEVERAL
                     AEEDPAAFWGDKAKALDWAEPWTKVFEFQAPNHAWFIGGKLNATVNCIDRHVHSDRRN
                     KAALLWVGEDGDERSYTYNRLYREMNRFANTLKRLGVKKGDRVILYMPLTPEGIISML
                     ACARIGAIHSVVYAGMGALALRTRIEDAGAKVVVCSDFTYRRGKAIALKPIVDEAVRD
                     LSSVDHVIVHRRGSRPGDEPVTFASEREKDFYDIQQGREIHCEPEMVDSEHPLFILYT
                     SGTTGKPKGVVHTTGGYLVGVNYLSKAFYQIQERDIYWSTSDIGWVVGHSFIVYGPLS
                     IGATVLCREGAPDYPSPEVTWEICERFGVNVMFTAPTAVRMWMSHGAEAPGKFDLSKL
                     RLMACAGEPLNPEAHRWAQQHLVGQGNGQVVDNWWQTEIAGPVIGTLPTFEARPGKAG
                     KPMPGAQLAVVNRDGSPVPDGQGGLLVIKFPLPYMLRTIWNDHKRYEDYWKDIPGCYS
                     AGDVAVKDADGYIAVLGRADDVLNVAGHRIGTADVEGSLIRHPSVAESAVVGLPDPIK
                     GERIVAFVVVRAGAATGPGLIASLKDHVREDLGGIAMPSEIQIRASLPKTRSGKIVRR
                     ALKAEALGQDPGDLSTLAD"
     gene            complement(2846..3328)
                     /locus_tag="VFV26_07435"
     CDS             complement(2846..3328)
                     /locus_tag="VFV26_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA deacylase"
                     /protein_id="HEX4846038.1"
                     /translation="MSSKAPSTQATRLLRQAGVAATEHLYRYEDRGGTSVSARELGVS
                     EHAVIKTLVMEDEKGAPLIVLMHGDREVSTKELARQTGAKSIQPCRPEVAHRHSGYLV
                     GGTSPFGTKKAMPVHAEATIFDLDRIYLNGGSRGFLVGLDPKDLDRVLKVNRVSVAIP
                     "
     gene            3363..>3890
                     /locus_tag="VFV26_07440"
     CDS             3363..>3890
                     /locus_tag="VFV26_07440"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4846039.1"
                     /translation="MGSAGLQSGIALVTGASRGLGREVAVQLAARGFTVVAGMRKPEA
                     IPGLEPLSLDVADEASIQAAASQIRARHGRLDLLVNNAGVLLDGSAGLLDLPLETLRR
                     TLETNALGPLRLAQILAPLMPEGGRIVNVSSGGGQLNEPSAWAPAYCISKTALNAVTV
                     QLAEALRARGIAVNAV"
BASE COUNT          559 a         1384 c         1312 g          635 t
ORIGIN      
        1 gcgcttccgc ctggcggccc ggatcgagcg cttcgacgaa accatccagc gcaccaccta
       61 cgccttcggg accgtgggcc tcaccggagc cgccttccaa ctgcccgcgg aactcgccgt
      121 cggccccctc accatctgcc tcgttccgac ctggctctcc cgcaccacca cccgggaccg
      181 ggctctcatc accgcgggcg ccggcctccg gtggcgcgtc ctcgacggcc agtccatcct
      241 cgccgagtac tacccccgcc cctcacgcct ggaccgcgcc acctacgaag ggggcttcgc
      301 cctgggctac cgcttccaga ccaggggcca ccgcttcacc ctcctggcca ccaacgtcca
      361 gggcaccacc gcccaccagg tgctcagcgg cgactacgcc ggcgggccca gggcgcccgg
      421 gcagtgggcc ctggggttca acctggtgcg gatcttttga gactggagtc tggaggtact
      481 gcttcctgag gcgccgcggt gcggcgcgcc atgggatcaa gtcggcgccg acccaccaga
      541 gcggcccaag ggaaaccatc gtcgcggccg caggccgcca ctaggtgtac ctccagcctc
      601 cggactccgg tctccagacc attttcaatc agccaacgtg ctcagatcgc ccggatcctg
      661 ccccagcgcc tcggccttga gggcgcggcg cacgatcttg cccgaccggg ttttcggcag
      721 gctcgcgcgg atctggatct cgctgggcat ggcgatgccg cccagatcct cccggacgtg
      781 atccttcagg ctggcgatca ggccggggcc cgtggcggcg ccggccctca cgacgacgaa
      841 ggccacgatg cgctcgccct tgatgggatc gggcaggccc accacggcgc tctccgccac
      901 ggagggatgg cggatgaggg agccctccac atcggcggtg ccgatgcggt ggcccgccac
      961 gttcagcaca tcatcggccc ggcccagcac ggcgatgtag ccgtccgcat ccttcacggc
     1021 cacgtcccct gcgctgtagc agcccgggat gtccttccag tagtcctcgt agcgcttgtg
     1081 gtcgttccag atggtgcgga gcatgtaggg cagcgggaac ttgatgacca gcaggccgcc
     1141 ctggccatcc ggcacggggc tgccatcgcg gttgaccacg gccagctggg cgccgggcat
     1201 gggctttccg gccttgccgg gccgggcttc gaaggtgggc agggtgccga tgaccgggcc
     1261 cgcgatctcc gtctgccacc agttgtccac cacctggccg ttgccctggc ccaccaggtg
     1321 ctgctgggcc cagcggtggg cctcgggatt caggggctcg cccgcgcagg ccatgaggcg
     1381 cagcttgctc aggtcgaact tcccgggggc ctcggcgcca tggctcatcc acatgcggac
     1441 cgccgtgggc gccgtgaaca tcacgttcac gccaaagcgc tcgcagatct cccaggtgac
     1501 ctcggggctc ggatagtcgg gcgcgccctc gcggcagagc acggtggcgc cgatgctgag
     1561 gggtccgtag acgatgaagc tgtggcccac cacccagccg atgtccgagg tgctccagta
     1621 gatgtcccgc tcctggatct ggtagaaggc cttgctcagg tagttcacgc ccaccaggta
     1681 gccgccggtg gtatgcacca cgcccttggg cttcccggtc gttccgctgg tgtagaggat
     1741 gaacagcggg tgctcggaat ccaccatttc cggttcgcag tggatctccc ggccctgctg
     1801 gatgtcgtag aagtcctttt cccgctcgct ggcgaaggtc acgggctcgt cgccaggccg
     1861 ggaaccccgc cggtggacga tgacgtgatc cacggaactg aggtcgcgca cggcctcatc
     1921 cacgatgggc ttcagggcga tggccttgcc ccggcggtag gtgaaatcgg aacacaccac
     1981 caccttggcg ccggcatcct cgatgcgggt gcgcagggcc agcgcgccca tgcccgcgta
     2041 gaccacgctg tggatggcgc cgatgcgggc gcaggccagc atggagatga tgccctcggg
     2101 cgtgagcggc atgtagagga tgacgcggtc gccctttttc acgcccaggc gcttcagcgt
     2161 gttggcgaag cggttcatct cgcggtagag gcggttgtag gtgtaggagc gctcgtcgcc
     2221 gtcctcgccc acccacagca gggccgcctt gttgcgccgg tcgctgtgca catggcggtc
     2281 gatgcagttc accgtggcat tgagcttgcc gccgatgaac caggcgtggt tgggggcctg
     2341 gaactcgaac accttcgtcc agggctccgc ccaatcgagg gccttggcct tgtcgcccca
     2401 gaaggccgcg gggtcctcct ccgccagggc ccgctccacc tcgtagttga tggccgcctg
     2461 cttggccagc cagccccgca tggggatggg ggcctcgccc ttctgcagcg cctggatggt
     2521 cttctgctgg gtgatgctga tttccacgtc gctcatggaa ggctccgaga acggggtgag
     2581 gtgcgttgga ttgggcaggt tgggagggaa ggtagcacga ggcccccatc ccgcccagca
     2641 gggatgacgg gcgtcacagg tagattttcc ggggagctcc cgtgtccaga tccgccagta
     2701 ccgccccctg cgaccttcac cccggcgtgg cccatgtcca gagcctcatg gccaacctcc
     2761 aggcgaagtc cggccgcacc ctggaggcat gggccgccct tgtccggagg gatggaacca
     2821 ccgaggggcc cggaggggcc gacgcctatg ggatcgcgac gctcacgcgg ttcaccttca
     2881 gcacccggtc caggtccttc ggatccagcc ccaccaggaa gccccggctg ccgccgttga
     2941 ggtagatgcg gtcgaggtcg aagatcgtgg cctccgcatg gacgggcatg gccttcttcg
     3001 tgccgaaggg actggtcccg cccaccaggt agccgctgtg gcggtgggcc acctcgggcc
     3061 tgcagggctg gatggacttc gcgccggtct gccgggccag ctccttcgtg ctcacctccc
     3121 ggtcgccgtg catgaggacg atgaggggcg cgcccttctc gtcttccatc accagcgtct
     3181 tgatgaccgc atgctcgctc acccccagct cccgggcgct gaccgaggtg ccgccgcgat
     3241 cctcgtagcg gtacaggtgt tcagtggcgg ccacgcccgc ctgccggagc agccgcgtgg
     3301 cctgggtgga gggggccttg gagctcatgc caccatcatt ccacggctga gcgggaggcg
     3361 gcatgggcag cgcaggactt cagagcggca tcgccctcgt caccggcgcc agccgcggcc
     3421 tggggcggga agtggcggtc cagctggccg cccgggggtt cacggtcgtg gccgggatgc
     3481 ggaaacccga agccatcccg ggcctggagc ccctgagcct ggacgtggct gacgaggcgt
     3541 ccatccaggc cgccgcgagc cagatcaggg cccgccacgg gcgcctggac ctcctcgtga
     3601 acaatgctgg cgtcctgctg gacggttccg cgggcctgct ggacctgccc ctggagaccc
     3661 tccggcgcac ccttgagacc aacgccttgg ggccgctgcg cctggcccag atcctcgcgc
     3721 cgctgatgcc cgagggcgga cgcatcgtga acgtgagcag cggcggcggg cagctcaacg
     3781 aaccctcggc ctgggccccg gcctactgca tttccaagac cgccctcaac gccgtcacag
     3841 tgcagctggc ggaggccctc agggcccgcg gcatcgccgt gaatgccgtc
//
LOCUS       DASUDT010000362         2117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1939350, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000362 DASUDT010000000
VERSION     DASUDT010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939350"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VFV26_07445"
     CDS             <1..877
                     /locus_tag="VFV26_07445"
                     /inference="COORDINATES: protein motif:HMM:NF015150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX4846040.1"
                     /translation="IRVLGDSLRHTGFVKVAGHAVRQADVDGAYEAARAFFALPEAAK
                     RRYFVEGGGGARGFTSFGSEHAKDNPVGDLKEFWHVGQELPAGHPLKPLYGDNLWPEA
                     EVPGFKAHTLALYRALEDCAGTLLEALALYLGLPGRSLADMIADGNSILRIIHYPALR
                     DRYLEGGVRSSAHEDINLITLLPAATGSGLQLLDREGRWHPVDGLAGEIVADAGDMLS
                     RHVNLKIPSTTHRVVNPDSPDAVRYSMPFFCHPRPEVLLDCPESLLEPGETKRFEPIT
                     AHAFLMQRLREIGLI"
     gene            complement(874..>2117)
                     /locus_tag="VFV26_07450"
     CDS             complement(874..>2117)
                     /locus_tag="VFV26_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846041.1"
                     /translation="TQKMGFFDRFRSRADEAPLPGLAALLEARGLPAALPGLEALLPA
                     FEAHRKAEEREAWADAVAEVHGQGLPLPEPWIDAQDHLLPELVPAWQAEREGRWSRGF
                     IDGLRQRIRVGEVVMPEAWLKLWDQTADDVLDLALDRLRNRSEGAFERLPSGAYRSPW
                     RDGFDAARLLLPEVWNGLFRDQHPFLAIPAADTLLAAPQILLPKLMDEVGRSLQSGAK
                     PLQLAVIERVGDKLMTARLQDPHPMSSPQRELKHMDFLEALRWQEKDLDPALGQPAPV
                     VLVKTSQGKPLTLATWNAGAPVLLPETDLIGFSDAQGEPLGIFFRQSLPRIQELRGEG
                     VAIWGPRRVRHEGFPNAEQLARLERFASAEQMKSLQAPAGSRPSAPKAAAPAGAPFNS
                     QGAAPLPRHLRGAGLGVQDPD"
BASE COUNT          306 a          776 c          734 g          301 t
ORIGIN      
        1 catccgcgtg ctgggcgaca gcctccgcca cacgggtttc gtgaaggtgg cgggccatgc
       61 cgtccgccag gccgacgtgg acggcgccta cgaggccgcc cgggctttct tcgccctgcc
      121 cgaggccgcc aagcgccgct acttcgtgga gggcgggggc ggggcccggg gcttcaccag
      181 cttcggcagc gagcacgcca aggacaaccc cgtgggcgac ctcaaggagt tctggcatgt
      241 gggccaggag ctgcccgcgg gccaccccct caagcccctc tacggcgaca acctctggcc
      301 cgaagccgag gtgccgggct tcaaggccca caccctcgcc ctctaccggg ccctggagga
      361 ctgcgcgggc accctgctgg aggccctggc cctctacctg ggcctgcccg gccgcagcct
      421 cgcggacatg atcgcggacg gcaactccat cctgcgcatc atccactatc ccgccctgcg
      481 ggaccgctac ctggagggcg gcgtgcgcag ctccgcccac gaggacatca acctcatcac
      541 cctgctgccc gccgccaccg gctcgggcct ccagctgctg gaccgcgagg ggcgctggca
      601 cccggtggac ggcctcgccg gggagatcgt ggccgatgcc ggtgacatgc tcagccggca
      661 tgtgaacctg aagatcccca gcaccaccca ccgcgtggtc aaccccgaca gccctgacgc
      721 cgtgcgctat tccatgccct tcttctgcca cccccggccc gaggtgctgc tggactgccc
      781 cgaatccctg ctggaacccg gcgaaaccaa gcgcttcgaa cccatcaccg cccacgcctt
      841 tctgatgcag cggctgcggg agatcgggct gatctagtcc ggatcctgca cgcccagccc
      901 ggccccccga aggtggcgcg gcaggggcgc tgctccctgg gaattgaacg gagcgccggc
      961 gggagccgcg gccttcggcg ccgaggggcg gcttccggcg ggggcctgga ggctcttcat
     1021 ctgttcggcg gaggcgaatc gttccagccg cgccagctgc tccgcgttgg ggaagccttc
     1081 gtggcgcacc cggcggggcc cccagatggc cacaccttcg ccgcgcagtt cctggatgcg
     1141 gggcagcgac tgccggaaga agatgcccag gggctcgccc tgggcgtctg aaaagccgat
     1201 gagatccgtc tccggcagca gcaccggcgc cccggcgttc cacgtggcca gggtgagcgg
     1261 cttgccctgg gacgtcttca cgagcaccac gggggcgggc tgccccaggg cggggtccag
     1321 atccttctcc tgccagcgga gggcttccag gaaatccatg tgcttcagtt cgcgctgcgg
     1381 agaggacatg ggatggggat cctgcaggcg ggccgtcatg agcttgtccc cgacccgctc
     1441 gatcaccgcc agctggaggg gcttggcgcc ggactggagg ctgcggccca cctcgtccat
     1501 gagcttgggc agcaggatct gcggcgccgc caggagggta tccgccgcgg ggatggccag
     1561 gaagggatgc tggtccctga acaggccatt ccagacttcc ggcagcagca ggcgggcggc
     1621 gtcgaagcca tcgcgccagg ggctgcggta ggcccccgag ggcaggcgct cgaaggcacc
     1681 ttcgctgcgg ttgcgaaggc ggtccagggc caggtccagc acgtcgtcgg ccgtctggtc
     1741 ccagagcttc aaccaggcct cgggcatcac cacctcgccc acgcggatgc gctgcctcag
     1801 cccgtcgatg aagccccggc tccagcgtcc ctcgcgctcc gcctgccagg cgggcaccag
     1861 ttcgggcagc aggtggtcct gggcatcaat ccaaggctcc ggcaggggga gcccctggcc
     1921 gtggacctcg gcgacggcat cggcccaggc ttcccgctcc tctgccttcc ggtgggcctc
     1981 gaaggcgggc agaagggctt ccagccccgg cagcgcggcg ggcaggcccc gggcctccag
     2041 cagggcggcc agccccggca ggggcgcctc gtcggcgcgg gaacggaatc ggtcgaaaaa
     2101 gcccattttc tgagttc
//
LOCUS       DASUDT010000363         3301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1453031, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000363 DASUDT010000000
VERSION     DASUDT010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3301
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453031"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VFV26_07455"
     CDS             complement(<1..445)
                     /locus_tag="VFV26_07455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846042.1"
                     /translation="MSNSILYVYEGFKNPGDSFSYCGARHYINESIPVVSEQSAMLRS
                     TRDIPSRLDLSGPDLVVFAGAPWFWEGCTKSVKYAGAYAFLQMTPNVRKVAIGVGSCF
                     LANHTKSTIESIIKSEQRELQLFWKSFDLIIVRDILAWWILSLVGV"
     gene            complement(594..2387)
                     /gene="mutL"
                     /locus_tag="VFV26_07460"
     CDS             complement(594..2387)
                     /gene="mutL"
                     /locus_tag="VFV26_07460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEX4846043.1"
                     /translation="MAKIRILPDQVANQIAAGEVVERPSSVLKELVENALDAGARRIE
                     VAWEEGGKRLLEVADDGSGMARDDLYLALERHATSKVRTAEDLGRLASFGFRGEALPS
                     IASVSRFDLTSAESDGAGHRLRCEFGVIKEVVPAPRSRGTTVTVRDLFAQLPARKRFL
                     KSTDTEHAQLWGAVARLALSAPGVHWTLRPGRGAPLVLPPVADAGQRLGPLLGEKLGR
                     LVPFVNGELPWRLRGFVSPPDLSFRDRNHLYLFVNGRAVRDRLLLAALSEAWSGTFAK
                     GSYPAAVLFLELPPEAVDVNVHPTKAEVRFREPQRIFAWVRQAAEEAWAQLRGGLASV
                     LELPPKPQEAEFDLDPSRRAAAQHPRLWSDHSGGALAYQALSETFATRPMETVYAYEP
                     PASGVAENLGPGGAIRYLGAFQRTYLVAEIEGDRGPELWIVDQHVAHERVLFERLFLR
                     RHAPAIQPLMPPQVVQVGPEALARLTPFLSELAAAGVEAEPFGGDALVVRGLPDFLAD
                     RDPQALLEDLLERLEREGRVDLDAFRRDLNAELACRAAIKKHHALPPDLALALIQDLL
                     ACEVPNTCPHGRPILKKLTLDDLERSFGRKA"
     gene            complement(2415..2870)
                     /locus_tag="VFV26_07465"
     CDS             complement(2415..2870)
                     /locus_tag="VFV26_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846044.1"
                     /translation="MSPLERWSLHLAALLTAGTGVMDGLLRWFGQRAGEFGPEPHPWL
                     PAAQHLHVLTAPLLVFALGVMVKGHLQARLRKGPEGRRTGLGAAFLIAPMVLSGYGIQ
                     VVTEPAWRTGLAWAHGLSAGLFLLAYLGHLAIRVKASEAESKGTVTALT"
     gene            complement(2867..>3301)
                     /locus_tag="VFV26_07470"
     CDS             complement(2867..>3301)
                     /locus_tag="VFV26_07470"
                     /inference="COORDINATES: protein motif:HMM:NF016121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEX4846045.1"
                     /translation="FPGAQLARKEFVLSEAQAGRVKALAGVEVPGRWTVAYEARRNGT
                     LVGVGFFDTHRVRTLNETLLVAISPEGRVLRVEAVAFREPAEYLAKEAWVRQFEGKAL
                     DPQLSLKGAIRPLSGATLTAHAMTDAARRCLALHQVLYREAK"
BASE COUNT          527 a         1150 c         1145 g          479 t
ORIGIN      
        1 cgacgcccac gagcgaaagg atccaccagg cgagaatatc ccttacgata atgagatcaa
       61 aagatttcca gaataattga agttctcttt gttctgattt aataattgat tcaattgtcg
      121 acttagtgtg attggccagg aaacagcttc ccaccccgat ggccaccttt cttacgttgg
      181 gcgtcatctg aaggaaggcg taggcgccag cgtatttgac gctcttcgtg caaccttccc
      241 aaaaccaggg tgcgcctgcg aagaccacca ggtccgggcc cgaaaggtcc aggcggctcg
      301 ggatgtctcg cgtgctgcgc agcatggcgc tctgctcaga gactacggga atcgattcgt
      361 tgatgtaatg cctggcgcca caataactga aactatcccc agggttcttg aacccttcat
      421 acacatacag gatggaattc gacatcaagg tcaccagtag ggccaggggg aagatccccg
      481 catgatcaag cgcgtgcgct aagcaagcaa gtcccagacc gggagccccg gttggcgcgt
      541 cctggggccc tgcggccggt aagcggggcc acccagcctc aaaagtgggt cattcatgcc
      601 ttcctcccga agctgcgttc caggtcgtcc agggtgagct tcttgaggat ggggcggccg
      661 tggggacagg tgttgggcac ctcgcaggcc aggaggtcct ggatgagcgc cagggccagg
      721 tccgggggca gggcgtggtg tttcttgatg gcggcgcggc aggccagctc ggcgttgagg
      781 tctcggcgga aggcgtccag gtccacgcgg ccctcgcgct ccaggcgctc cagcaggtcc
      841 tccagcaggg cctggggatc ccggtccgcc aggaagtccg gcaagccgcg caccaccagg
      901 gcatcgcctc cgaagggctc cgcctccacc ccggcggcgg ccagttccga tagaaagggc
      961 gtgagccgcg ccagggcctc gggccccacc tgcaccacct gggggggcat cagcggctgg
     1021 atggcggggg cgtggcggcg caggaaaagc cgctcgaaga gcacccgctc gtgggccacg
     1081 tgctggtcca cgatccagag ttccggcccg cggtcgcctt cgatttccgc caccaggtag
     1141 gtccgctgga aggcccccag gtagcggatg gccccgccgg gccccaggtt ctccgccacc
     1201 ccggacgcgg gtggctcgta ggcgtagacc gtctccatgg gccgcgtggc gaaggtttcg
     1261 ctgagggcct ggtaggccag ggcgccgccg gaatgatcgg accagagccg cggatgctgg
     1321 gccgccgcgc ggcgggaggg atccaggtcg aactcggcct cctgcggctt ggggggcagc
     1381 tccagcaccg aggccagccc gcccctcagc tgggcccagg cctcctcggc cgcctgccgc
     1441 acccaggcga agatgcgctg gggctcgcgg aagcgcactt ccgccttggt cggatgcacg
     1501 ttcacgtcca cggcctccgg gggcagctcc aggaagagca ccgccgccgg gtacgagccc
     1561 ttggcgaagg tccccgacca ggcctcggag agggccgcca gcagcaggcg atcccgcacg
     1621 gcccggccgt tcacgaagag gtagaggtgg ttgcggtccc ggaagctgag gtccggcggc
     1681 gacacgaagc cccgcaggcg ccaggggagc tcgccgttca cgaagggcac caggcggccc
     1741 agcttctccc ccagcagggg ccccagccgc tggccggcat ccgccaccgg gggcagcacc
     1801 aggggcgcgc cgcggccggg ccggagggtc cagtgcacgc cgggggcgct cagggccagc
     1861 cgcgccacgg cgccccagag ctgggcatgc tcggtgtccg tggacttcag gaagcgcttc
     1921 cgcgccggca gctgggcgaa gaggtcgcgc acggtcaccg tggtgccgcg gctgcgcggc
     1981 gcgggcacca cctccttgat gacaccgaac tcgcagcgca ggcggtggcc cgcgccgtca
     2041 ctttccgcgc tcgtgaggtc gaagcggctc acgctggcga tgctgggcag ggcctcgccc
     2101 cggaagccga aggaagccag gcggcccagg tcctccgccg tgcgcacctt gctggtggcg
     2161 tggcgctcca gggccaggta gaggtcgtcc cgggccatgc cggagccgtc gtcggccacc
     2221 tccagcaggc gcttgccgcc ttcctcccag gccacctcga tgcgccgggc cccggcatcc
     2281 agggcgttct ccaccagttc tttcagaacg gacgaaggcc gctccaccac ttcccccgcg
     2341 gcgatctggt tcgccacctg gtccgggagg atgcggatct tcgccatggc ctagacgcta
     2401 gcagctatcc ccgctcaggt cagggcggtc acggtcccct tcgactcggc ttccgaagcc
     2461 ttcacccgga tcgccaggtg gcccaggtag gccagcagga acagcccggc gctgaggccg
     2521 tgggcccagg ccagacccgt gcgccaggcg ggctccgtca ccacctggat gccatagccc
     2581 gacagcacca tgggcgcgat gaggaaggcc gcgcccaggc ccgtgcggcg cccttcgggg
     2641 cccttcctca gccgcgcctg caggtgccct ttcaccatca cgcccagggc gaagaccagc
     2701 aggggcgccg tgaggacgtg aaggtgctgg gccgcgggca gccaggggtg gggctcgggt
     2761 ccgaactccc cggcccgctg gccgaaccag cgcaggagcc catccatcac gccggtcccc
     2821 gcggtgagga gggccgcgag gtgcaggctc cagcgctcca gaggactcac ttcgcctccc
     2881 ggtagagcac ctggtggagg gccaggcagc ggcgggccgc gtccgtcatg gcgtgggccg
     2941 tgagcgtggc gccggagagg ggccggatgg cccccttcag gctgagctgc ggatccaggg
     3001 ccttcccttc gaactgcctc acccaggcct ccttggccag gtactcggcg ggttcgcgga
     3061 aggccaccgc ctccacgcgg aggacgcggc cctcgggaga gatggccacc agcagcgttt
     3121 cattcagggt gcggacccgg tgggtgtcga agaagccgac ccccaccaga gtcccgttcc
     3181 tgcgggcctc gtaggccacg gtccagcgtc ccggcacctc caccccggcc agggccttca
     3241 cccggcccgc ctgggcctcg ctgagcacga actccttccg ggccaactgg gctcccggaa
     3301 a
//
LOCUS       DASUDT010000364         6570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_613857, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000364 DASUDT010000000
VERSION     DASUDT010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6570
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613857"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..688
                     /locus_tag="VFV26_07475"
     CDS             <1..688
                     /locus_tag="VFV26_07475"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX4846046.1"
                     /translation="PRFAFGTWKMEILGGFASALFLLGVAAWMVIGSVERILDPKPIH
                     YREAIIVAILGLAVNVACALILGQAHDHGHEHHHGHGEGGHHHDLNLRSAYLHVIADA
                     ATSVLAIAALAGGMVFGWAWLDPAMGFAGAILVAVWAQGLLRDSSRVLLDAEMDHPVV
                     AEIREAIATQAEWGGETRITDLHVWRVGKGSYACILALASPNPGLTVQSVRQCLSIHE
                     EIVHLTVEIQ"
     gene            complement(991..1067)
                     /locus_tag="VFV26_07480"
     tRNA            complement(991..1067)
                     /locus_tag="VFV26_07480"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1031..1033),aa:His,seq:gtg)
     gene            1189..2682
                     /locus_tag="VFV26_07485"
     CDS             1189..2682
                     /locus_tag="VFV26_07485"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX4846047.1"
                     /translation="MKQVLGLSAFAAGCMALGMGLSHGWVAKAQEEKPVTVEAKGLDR
                     LPPIAEVAEKLNPTVVAITNTSFVKNRGFEHPQIGGQDFFDFFFGPGGPQQRRAPRGG
                     DEAEQRAVSGGSGVIISPQGEILTNYHVIASMGGGDNALEVKTSDDRTFKATVLGKDK
                     ELDIALIKIDAAHLPFAKLGDSDGLKIGEWVVAIGNPFGLEHTVTQGIISAKGRKLDP
                     GVGSFLQTDAAINRGNSGGPLLNLRGEVVGINTAINPAGQNIGFAVPISMVNRILKDL
                     RSGKPVSRGYLGIGPLELDQAYQEALGVKSGVVVSTVEKGQAADKAGVQRLDVITALD
                     GQAVRNPDDLVTMVSSRRAGETLKLTIWRDGKSLTLTATLGDRKALEDQRRREAGEAP
                     EDEDGGKSLGDAKGINLDKAYGFTVEPMDLKHRLKGVVVTAVDPRSPAAERGLAPGMV
                     ITEVGRQAVNSLAEFNAQVKKAGGKTLLLYIQSPDGRQKVTLAVPPR"
     gene            2777..4087
                     /locus_tag="VFV26_07490"
     CDS             2777..4087
                     /locus_tag="VFV26_07490"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4846048.1"
                     /translation="MGQRLLLVDSDRSFLKEHQVSLEAAFDLEVASSPEGVPARLERG
                     GYAAVLICVEVSDNKGYALCSTLRKHSALDRVKIALISAKATEEEYRRHQSLKGKADL
                     YLHKPIAPSALVAALGPLVPGRVLDPDNPLGELADTELGDDWLDGLKGAMEAPPPPPA
                     PAPAATAPVKRLESRATVPPDTSRTQLLEEQIKALRDELAVKDQRLREAEDELQRQLG
                     SVTLNLEDVTTAGREAETLKADLAAALEAQAQLNATIEGLVDRHSALEGLHQAALLEV
                     ASHKERAHLLLLEQAGLEATLRGQGRDLAELGERLRQAEAELETSQAQAQERGQQLQV
                     QQEEIVRLTAQVAELRQQVDEAAVTHDGERLELMSGLDQKEADLGRLAQALEQQQEAY
                     AVLEREKQTAYGQLSEHRDRLRNLDTLLQEVQERLKRGSDLARG"
     gene            4091..5407
                     /locus_tag="VFV26_07495"
     CDS             4091..5407
                     /locus_tag="VFV26_07495"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX4846049.1"
                     /translation="MPLAAILICAALILTSAFFVMAEFAAVRVRPTQLEALLETDPRA
                     ASALEIHRGLGHHLSSIQAGIVLCALALGAVGEELFSHLFLGLFGRLPWPALAVPLSS
                     GLALLVMTTLHVVLAELVPRSLAIHAATPWALRTAAPLLAWSRLVRPLTWGLTKLSHL
                     VLRLLGAHPDADAEDLLPSEAEFRRMLERSQAEGHLELDRKELIENLFDFSKRTVKEI
                     AVPRAQVVCFDLRHDLAENLALARTTIHTRIPLVEGDLDRVVGIIHLKELLWAMHDGP
                     GSVDLRALARPAFLVPEMKPIQGLLLEFQQRKQHLALVVNEHGGVDGLVTLEDVLEEL
                     VGEIQDEFDREAIQLRKTRGGAWLAQGNVMLEQLVDHLRLDLVAEAGSVSLGGFFQER
                     LGRVLRPGDELRLQGWRIRVLSMRGLAPGQFLLKPLPPENGDEPTP"
     gene            5391..6245
                     /locus_tag="VFV26_07500"
     CDS             5391..6245
                     /locus_tag="VFV26_07500"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEX4846050.1"
                     /translation="MNPPLEGFLLAAGLGTRMGPLSACLPKPAWTLRGRPLLQWGAEA
                     LRAAGVRSLGCNAHLLPERLRAVAAQVAGGLEVFDEPQLLGSAGGLLHARGRVEAELL
                     TWNADIWADGVPFDLLRSRHREAGATLSWLLVPHPGGPWNPVWMDHEGRVLPKGVAGP
                     WGPYHFTGAAAWSPEALALLPEGPSEVNDLRPRLPLHLGVVAEPFPWREVGTPASLIE
                     AAADLAPDHEGRLPGCYVHPGAHPDAHTGGRLTRCILGPGAAPPPAITDADALWFEEG
                     GHQVRLGL"
BASE COUNT         1008 a         2354 c         2272 g          936 t
ORIGIN      
        1 cccacgcttc gccttcggca cctggaagat ggagatcctc ggcggcttcg ccagtgccct
       61 gttcctgctg ggcgtggcgg cctggatggt gatcgggtcc gtggagcgga tcctcgatcc
      121 caagcccatc cactaccgcg aggccatcat cgtggccatc ctcgggctgg ccgtgaacgt
      181 ggcctgcgcc ctcatccttg ggcaggccca tgaccacggg cacgagcatc accatgggca
      241 cggcgagggc ggccaccacc acgacctgaa cctccggtcc gcctacctgc atgtcatcgc
      301 cgatgcggcc acctccgtcc tcgccatcgc cgccctggcg ggtggcatgg tgttcgggtg
      361 ggcgtggctc gatccggcca tgggcttcgc cggagccatc ctggtggccg tctgggccca
      421 gggcctgctg cgggactcat cccgcgtcct tctggatgcg gagatggatc acccagtggt
      481 cgcggagatc cgcgaggcca tcgccaccca ggccgagtgg ggtggcgaga cgcggatcac
      541 ggacctccac gtctggcggg tcgggaaggg cagctacgcc tgcatcctcg ccctggccag
      601 ccccaacccc gggctgacag tccagtccgt gcggcagtgc ctctccatcc acgaggagat
      661 cgtgcacctc acggtggaga tccagtagtg gggttcgtcc gacccacccg gaccggactc
      721 gaaccggccg cagcccgctg cgcggtctgc agatcttgct ccgacactcc gcctgacaca
      781 ccgtgccccg cacggtgctc cccttcgccg gtggctcagg gagtcggagc ctcccccgcg
      841 ctgtctccgc aagaactcgc tcctcgccgg ggcccgactt cgcagggtcc cccggaccct
      901 gctgcgtcac ccggcggtcg cgactgtcgc cggttcgact ctcggctcgt tccagaatga
      961 aaaggccccc gtgcgggggc cttttcattc tggggcggct gaccggactc gaaccggcga
     1021 cacctggaat cacaatccag tactctaacc aactgagcta cagccgccgt tggactgctc
     1081 agattatcct ggccggcccg ggaaggccag cgggaacctt cggggagctg cgatcatgga
     1141 aaggcatgcc ggggatccgg cgctgtgagg gatggcatga atcgtcaggt gaagcaggtc
     1201 ttggggttgt cggccttcgc ggccgggtgc atggccctgg ggatggggct cagccacggc
     1261 tgggtggcga aggcgcagga ggagaagccg gtgaccgtgg aggcgaaggg gctggaccgc
     1321 ctgccgccca tcgcggaggt ggcggaaaag ctgaacccca ccgtggtggc catcaccaac
     1381 acgagcttcg tgaagaaccg gggcttcgag cacccccaga tcggcggcca ggacttcttc
     1441 gacttcttct tcggccccgg cgggccccag cagcggcgcg ctccccgggg gggggacgag
     1501 gccgagcagc gggccgtgtc cggcggctcc ggcgtgatca tcagccccca gggcgagatc
     1561 ctcacgaact accacgtcat cgccagcatg ggcggcggcg acaacgcgct ggaggtcaag
     1621 acctctgatg accggacctt caaggccacg gtgctgggca aggacaagga gctcgatatc
     1681 gcgctcatca agatcgacgc ggcccacctg ccctttgcca agctgggcga ttccgatgga
     1741 ttgaagatcg gcgaatgggt ggtggccatc ggcaacccct tcggcctgga gcacaccgtc
     1801 acccagggca tcatcagcgc caagggccgc aagctggatc cgggcgtggg ctccttcctc
     1861 cagaccgatg ccgccatcaa ccgcggcaat tccggcggac ccctgctgaa cctgaggggc
     1921 gaggtggtgg gcatcaacac cgccatcaac cccgcgggcc agaacatcgg cttcgccgtg
     1981 cccatcagca tggtgaaccg catcctcaag gacctgcgca gcggcaagcc cgtgagccgg
     2041 ggctacctgg gcatcggccc cctggagctg gaccaggcct accaggaggc cctgggggtc
     2101 aaatcgggcg tggtggtgag caccgtggag aaggggcagg ccgccgacaa ggccggcgtc
     2161 cagcgcctgg acgtgatcac ggccctggat ggccaggccg tccgcaatcc cgatgacctc
     2221 gtgaccatgg tctccagccg ccgggcgggc gaaaccctca agctcaccat ctggcgggac
     2281 ggcaagagcc tgaccctcac ggccaccctg ggcgaccgga aggccctgga ggaccagcgc
     2341 cgccgggagg ccggcgaggc gcccgaggat gaggacggcg gtaagagcct gggtgacgcg
     2401 aagggcatca acctggacaa ggcctacggc ttcaccgtgg aacccatgga cctgaagcac
     2461 cgcctcaaag gcgtggtggt gacggccgtg gatccgcgct ctcccgccgc cgagcggggc
     2521 ctggccccgg gcatggtcat caccgaggtg ggccgccagg ccgtgaacag cctggcggag
     2581 ttcaacgccc aggtgaagaa ggccggtggc aagaccctgc tgctctacat ccagagcccc
     2641 gatggccggc agaaggtcac cctggccgtc ccgccgcgct gatccggcgt ttctttgcct
     2701 gaaccggaac cccggcccgc cggggttccg gccgttcagg taaactcgaa ggttcaacca
     2761 aggctaagga tcgaccatgg gccagcgcct ccttcttgtg gacagcgacc ggagcttcct
     2821 caaggagcat caggtcagcc tggaagcggc cttcgatctg gaggtggcca gctcgcccga
     2881 gggcgtgccg gcgcgcctgg aacgcggcgg gtacgccgcg gtgctcatct gcgtcgaggt
     2941 gtcggacaac aagggctacg ccctctgctc caccctccgc aagcactcgg ccctggaccg
     3001 cgtgaagatc gccctcatca gcgccaaggc cacggaagag gagtaccgcc gccaccagag
     3061 cctgaaaggc aaggcggacc tctacctgca caagcccatc gcccccagcg cactggtggc
     3121 cgccctcggg cccctggtgc cgggccgtgt cctggatccc gacaatcccc tgggcgaact
     3181 ggcggacacg gaactgggcg acgactggct cgatggcctg aagggcgcca tggaggcccc
     3241 gccgccgccg ccggccccgg cccccgcggc caccgccccg gtgaaacgcc tggagtcccg
     3301 ggccacggtc cctcccgata cctcccggac ccagctcctg gaggagcaga tcaaggccct
     3361 gcgggacgaa ctggccgtga aggaccagcg cctccgtgag gccgaggatg aactccagcg
     3421 ccagctggga tccgtgacgc tgaacctgga ggacgtgacc accgccggcc gggaggccga
     3481 aaccctgaag gccgatctgg cggcggccct ggaagcccag gcccagctga acgccaccat
     3541 cgaagggctt gtcgaccggc acagcgccct tgaaggcctg caccaggccg ccctgctgga
     3601 ggtggccagc cacaaggagc gggcccacct gcttctgctg gagcaggcgg ggctggaggc
     3661 caccctgcgg ggccagggcc gcgacctggc cgagctgggc gagcgcctgc ggcaggcgga
     3721 ggcggaactg gaaaccagcc aggcccaggc ccaggaacgg gggcagcaac tccaggtcca
     3781 gcaggaggag atcgtccggc tgacggccca ggtggcggag ctgcgccagc aggtggacga
     3841 agccgccgtc acccacgatg gcgagcggct ggagctcatg agcggattgg accagaagga
     3901 ggccgacctg ggccgcctgg cccaggccct ggaacagcag caggaggcct acgcggtcct
     3961 ggaacgcgaa aaacagaccg cctacggcca gctttccgaa caccgcgacc ggctccggaa
     4021 cctggacacc ctgctccagg aggtccagga gcggctgaag cggggttctg acctggcccg
     4081 gggctgagcc gtgccccttg ccgcgatcct gatctgcgcc gccctcatcc tgaccagcgc
     4141 ctttttcgtg atggcggagt tcgccgccgt gcgcgtgcgc cccacccagc tggaggcgct
     4201 gctggagacg gatccccggg ccgcctcggc cctggagatc caccggggcc tgggccacca
     4261 cctctcctcc atccaggcgg gcatcgtgct gtgcgccctg gccctgggcg ccgtgggcga
     4321 ggagctgttc agccacctct tcctgggcct gttcggccgc ctgccctggc ccgccctggc
     4381 ggtgccgctg agttcgggcc tggccctgct ggtgatgacc accctccacg tggtgctggc
     4441 ggagctggtg ccccgcagcc tggccatcca tgccgccacc ccctgggccc tgcgcaccgc
     4501 cgcgcccctg ctggcctggt cgcggctggt ccgccccctc acctggggcc tcacgaagct
     4561 gagccacctg gtgctgcgcc tgctgggcgc ccatcccgac gccgacgccg aggacctgct
     4621 gcccagcgag gccgagttcc gccgcatgct ggaacgcagc caggccgaag ggcacctcga
     4681 gctcgaccgc aaggagctca tcgagaacct cttcgatttc agcaagcgca cggtgaagga
     4741 gatcgccgtg ccccgggccc aggtggtctg cttcgacctg cgccacgacc tggcggaaaa
     4801 cctggccctg gcccgcacca ccatccacac ccgcatcccc ctggtggagg gcgacctgga
     4861 ccgcgtggtg ggcatcatcc acctgaagga gctgctctgg gccatgcacg acgggcccgg
     4921 ctccgtggac ctgcgggccc tggcccgccc cgccttcctg gtgcccgaga tgaagcccat
     4981 ccagggcctg ctgctggagt tccagcagcg caagcagcac ctggccctgg tggtgaacga
     5041 gcatggcggc gtggacggcc tggtgacgct ggaggacgtg ctcgaagagc tggtgggcga
     5101 gatccaggac gaattcgacc gcgaggccat ccagctgcgg aagacccgcg gcggcgcctg
     5161 gctggcccag ggcaacgtca tgctggagca gctggtggac cacctgcgcc tggacctggt
     5221 ggccgaggcg ggctccgtga gcctgggcgg cttcttccag gagcgcctgg gccgcgtgct
     5281 gcgccctggc gacgagctgc gcctccaggg ctggcgcatc cgcgtgctgt ccatgcgggg
     5341 cctggccccg gggcagttcc tgctgaagcc gctgcccccc gagaatggcg atgaacccac
     5401 cccttgaggg cttcctgctg gcggcgggcc tgggcacccg catggggccc ctgagcgcct
     5461 gcctgcccaa gcccgcctgg accctgcggg gcaggcccct gctccagtgg ggggccgagg
     5521 ccctgcgggc cgccggggtc cggagcctgg gctgcaacgc ccacctgctg ccggagcggc
     5581 tgcgggcggt ggccgcccag gtggcggggg gcctggaggt cttcgacgaa ccgcagctgc
     5641 tgggcagcgc cgggggcctg ctccatgccc ggggccgcgt ggaggccgag ctgctcacct
     5701 ggaacgccga catctgggcc gacggggtgc ccttcgacct cctgcgcagc cgccaccggg
     5761 aagcgggggc caccctcagc tggctgctgg tgccccaccc cggcggcccc tggaatcccg
     5821 tgtggatgga tcacgaaggc cgcgtgctgc ccaagggcgt ggcgggcccc tgggggccct
     5881 accacttcac cggcgccgcc gcctggtcgc ccgaggccct ggccctgctg cccgaggggc
     5941 ccagcgaggt gaacgacctg cgcccgcgcc tgccgctgca tctgggcgtg gtggccgagc
     6001 ccttcccctg gcgggaggtg ggcacgcccg cctcgctcat cgaggccgcc gccgacctgg
     6061 cgcccgatca cgagggccgc ctgcccggct gctacgtgca tcccggcgcg caccccgacg
     6121 ctcacacagg gggccgcctc acccgctgca tcctgggccc cggcgccgcc ccgccgcccg
     6181 ccatcaccga tgccgacgcc ctctggttcg aagagggcgg ccaccaggtg aggctggggc
     6241 tttagcgacc ccaaccacaa cctgcttgcc ggcgaattcc agcccgaaaa ggctgggggt
     6301 ccacagattt caccgattca cacagattca atgcgcgaag cgcgaggctg ttctggctgg
     6361 cccgtcgcgg gcatgggccc tcgtgtgggc tccagggtcg cgcttttttt ggatgcgcgg
     6421 caccggcgcc cgcacgaacc tccggcaggg ccggaggccg ccttcggcgg gcccaggccg
     6481 gttgggtcgg cgcccatctg tgaaatctgt gtcatctgtg gtttcagctt ttgatcttga
     6541 aaggggtggc tgaggcccgc cgatcaccag
//
LOCUS       DASUDT010000365         2381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1342426, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000365 DASUDT010000000
VERSION     DASUDT010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342426"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2381
                     /locus_tag="VFV26_07505"
     CDS             <1..>2381
                     /locus_tag="VFV26_07505"
                     /inference="COORDINATES: protein motif:HMM:NF016784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846051.1"
                     /translation="GKAGAQFKGRAIDLLDIVTLNSAVDMSSLQDGLTHAAHPLSGRT
                     FMTGDDEMEKGGKGDHCSSFVATKGATKSGRFLFTQMFMWNGYTGTEWNVMADVVPEK
                     GHRFVMQTFAGGIHSGTDWYLNASGLVMGETTVGQTPFNPDGTPQSNRIRKAAQYASG
                     IDEAAAILFKQNNGLYTNDWTMADTKTDEGACFLLGTEKTRMWRTGTKGKPADTPGNH
                     KDFIWANNNNRDLEVRSEYGANPDNAPADLAFNTWNRDIAFQEAFKAMGGTGFDLDNA
                     TRLLATSPINRPHACDAKLTTSEMAEKLVFIAHQGKTTLREKMVGGRWIADLPGATPH
                     LTHGYTAFSPIWVSEKLQAARNQFVSRIGGADAERAAWSKEKTVKAAPVPDVAGVKEA
                     YGFESKLLWTGTVKPASDAENWFISGSAAYWQQMKHLPAVPAKAFDTQSAALADLATR
                     HLWLDAKEGAQAPLATTTAYDRYGAYQIPRIRGVFALHQLRLHLGNAAFAKAMQAAHG
                     RFNGKAARTADLMKALSEGAGRDVAPILKPWLERADLPAPRVQARVEKAGDAYEVKVE
                     VDQTGFAYPFVAFASLETEKGAKLERLEVKGAKAAFTLRCEARPTGLVFNAGNDIPTP
                     RANFWVPGNVLDDWSATLLVFGTARELEAQRTLALNYREALADNMTEVLLPVKADGET
                     SDAELAASDLILFGGPADNGITARLQAEGKLPFEAGSGWFTWQGRTYGRPDDGLLAAF
                     PNPWNPKRMLVLVIANSRTQQWAMTKAIPRGLPGWALYRGGEVKAKGHAAADG"
BASE COUNT          441 a          862 c          771 g          307 t
ORIGIN      
        1 cgggaaggcg ggcgcccagt tcaagggccg ggccatcgac ctgctcgaca tcgtgacgct
       61 caacagcgcg gtggacatga gctccctgca ggacggcctg acccacgccg cccaccccct
      121 cagcggtcgc accttcatga ccggggacga cgagatggag aagggcggga agggcgacca
      181 ctgctcctcc ttcgtggcca ccaagggcgc caccaagagc ggtcggttcc tcttcacgca
      241 gatgttcatg tggaacggct acacgggcac cgagtggaac gtgatggcgg acgtggttcc
      301 cgagaagggg caccgcttcg tcatgcagac cttcgccggc ggcatccaca gcggcaccga
      361 ctggtacctc aacgcctcgg gcctggtgat gggcgagacc accgtgggcc agacgccctt
      421 caatcccgac ggcacccccc agagcaaccg catccgcaag gccgcccagt acgccagcgg
      481 catcgacgag gccgccgcca tcctcttcaa gcagaacaac ggcctctaca ccaacgactg
      541 gaccatggcc gacaccaaga ccgacgaggg cgcctgcttc ctgctgggca ccgaaaagac
      601 gcgcatgtgg cgcaccggca ccaagggcaa gcccgcggac acgccgggca accacaagga
      661 cttcatctgg gccaacaaca acaaccggga cctggaggtg cgtagcgagt acggcgccaa
      721 tccggacaac gccccggcgg acctggcctt caacacctgg aaccgcgaca tcgccttcca
      781 ggaggccttc aaagccatgg gcgggaccgg cttcgacctc gacaacgcca cccggctgct
      841 ggccaccagc cccatcaacc gcccccacgc ctgcgatgcc aagctcacca cctccgagat
      901 ggccgagaag ctcgtcttca tcgcccacca gggcaagacc accctgcgcg aaaagatggt
      961 ggggggccgc tggatcgcgg atctgccggg cgccacgccc cacctgaccc acggctacac
     1021 ggcgttcagt cccatctggg tgtctgagaa gctccaggcc gcgagaaatc agtttgtctc
     1081 gcgcatcggc ggagccgatg ccgagagagc ggcctggagc aaggaaaaga ctgtgaaggc
     1141 ggcacccgtg cctgatgtgg ccggcgtgaa ggaggcgtac ggcttcgagt cgaagctgct
     1201 gtggacaggg actgtcaagc ccgcctccga tgcggagaac tggttcatca gcggctccgc
     1261 ggcctactgg cagcagatga agcacctgcc cgccgttccc gccaaggcct tcgataccca
     1321 gagcgcggcc ctggcggacc tcgccacccg ccacctctgg ctggatgcca aggagggggc
     1381 ccaggcgccc ctggccacca ccacggccta tgaccgctac ggcgcctatc agatcccgcg
     1441 catccgcggc gtcttcgccc tccatcagct gcgcctgcac ctgggcaatg ccgccttcgc
     1501 caaggccatg caggcggccc acggccgctt caacggcaag gccgcccgca cggcggacct
     1561 catgaaggcc ctgtccgagg gcgccggccg ggacgtggcc cccatcctca agccctggct
     1621 ggagcgcgcc gaccttccgg cgcccagggt ccaggcccgg gtggagaagg ccggtgacgc
     1681 ctacgaggtg aaggtggagg tcgaccagac cggcttcgcc tatcccttcg tggccttcgc
     1741 cagcctggag acggagaagg gcgcgaagct ggagcgcctg gaggtgaagg gcgccaaggc
     1801 cgccttcacg ctccgctgcg aggcccggcc cacagggctg gtcttcaatg cggggaacga
     1861 catccccacc ccccgcgcca acttctgggt gccgggcaac gtgctggacg actggagcgc
     1921 caccctgctg gttttcggca cggcccggga actggaagcc cagcgcaccc tcgccctgaa
     1981 ctaccgtgag gccctggcgg acaacatgac cgaggtgctg ctgcccgtga aggccgatgg
     2041 ggaaaccagc gacgccgagc tggccgccag cgacctgatt ctgttcggcg ggcccgccga
     2101 caacggcatc acggcccgcc tccaggccga gggcaagctg cccttcgagg ccggcagcgg
     2161 ctggttcacc tggcagggcc gcacctacgg ccgccccgac gatggcctgc tggcggcctt
     2221 ccccaatccc tggaacccga agcggatgct ggtgctcgtg atcgccaaca gccgcaccca
     2281 gcagtgggcc atgaccaagg ccatcccccg gggattgccg ggctgggccc tctaccgcgg
     2341 cggcgaggtg aaggccaagg gacacgcggc ggcggatggg a
//
LOCUS       DASUDT010000366         6204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1475232, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000366 DASUDT010000000
VERSION     DASUDT010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6204
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475232"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VFV26_07510"
     CDS             <1..718
                     /locus_tag="VFV26_07510"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX4846052.1"
                     /translation="LQVKLLRVLQERRLRRLGATEERPVDVRVIAATNRDLRARAESG
                     AFRDDLYYRLNILQIELPPLRERLEDLPILAEHFIRRFCQKLGKPPMQLHADTMAQLL
                     AYRFPGNVRELENLMERCVALNPGGPITRDLLPDGFGQAASDGLARPVPLAIPPEGFD
                     LEAWLNALKGHFLRRALEDVGGVKTKAGKRLGMSFRAYRYWLAELGGLEALPKDFPWP
                     ADFPAPAVDEGGGTEGAKEA"
     gene            808..1302
                     /locus_tag="VFV26_07515"
     CDS             808..1302
                     /locus_tag="VFV26_07515"
                     /inference="COORDINATES: protein motif:HMM:NF019934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX4846053.1"
                     /translation="MTPNPACRRDRGFSLLELLVAMMIIAVLGTLGFSQYKKHSAQAR
                     YLKAQDDLKIVAEGLDQYYLKHGRFPDFGSFDAMIDGNSTLVKESLIKPGMGPLDPFG
                     QPYEGKSTRVTYELKCAGDPGNPEDAGPIVRTPGQMTNTSPVSGQGPGGAPKADAPAA
                     GAPK"
     gene            1299..1832
                     /locus_tag="VFV26_07520"
     CDS             1299..1832
                     /locus_tag="VFV26_07520"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX4846054.1"
                     /translation="MIDLHKLPAEGLRLNGTTGEVALEGGVVLRDLTWSVFALASDGD
                     VFLDVKGQAVWQGACSRCLAPLDRPIAVESQFLGSKDPELVGRGSHTLGTQDLDVVFL
                     PEDSLDEAELVREQFELQSPMHPLCSEGCKGLCPACGKNWNKGPCQCQPEAVQAPSAL
                     NKALTKALAGIKLDPES"
     gene            1877..2062
                     /gene="rpmF"
                     /locus_tag="VFV26_07525"
     CDS             1877..2062
                     /gene="rpmF"
                     /locus_tag="VFV26_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX4846055.1"
                     /translation="MPNPKRRHSKARRDRRRTHDALEVMSASTCPNCQTPKLPHRVCP
                     SCGFYRGKLAVRVAANA"
     gene            2073..3098
                     /gene="plsX"
                     /locus_tag="VFV26_07530"
     CDS             2073..3098
                     /gene="plsX"
                     /locus_tag="VFV26_07530"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX4846056.1"
                     /translation="MDGHRIALDVMGGDNAPHATLLGAREALEAWPGLFLFLVGDEAV
                     LRPELARHGFTPELMARAEVVHASQTVVMEDKATSILKEKKDSSIRVAAQLVREGRAH
                     GVVSMGHTGAAMVASSLVIGKLEGVDRPALASVLPNMKGGPTVLLDVGANVDSRAEHI
                     AQFAVMGSVYAEEVLGLERPRVGILSVGEEDGKGTDVTKEASAMLRQMEIRFEGNAEG
                     RDIWNGTFDVIACDGFVGNVVLKSSEALAEGIIGGLRESFMATPITKLAGLMAKPAMK
                     RFKKKLDYAEYGGAPLLGVKGVSIIGHGRSDHKAVRNAIRAALRAAEHRLHERIQERV
                     ALLLPQD"
     gene            3233..4171
                     /gene="fabD"
                     /locus_tag="VFV26_07535"
     CDS             3233..4171
                     /gene="fabD"
                     /locus_tag="VFV26_07535"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX4846057.1"
                     /translation="MSKVAWLFPGQGSQAVGMGVALAGAEPAAKAVLQEADGALGFPL
                     SQLMAEGPEETLKLTEHTQPAILTHSTMVVRAFASRLPRPDFAAGHSLGEYSALVALG
                     ALDFADAVRTVRERGRAMQEAVPVGVGAMAAILGMSLADVEASCAEAAASTGKIVVPA
                     NFNGPGQIVIAGHAEAVDAALEAVKARGGRKAMKLPVSAPFHSPLMEPAQARMEPILR
                     DLVFRAPICPLVNNVDAAAVSGPEALRDGLVRQIPGAVRWQATLDLLLDEGVTTFLEL
                     GPGKVLAGLVKRQAKDRGLEVAALSFGAPEDLAQLG"
     gene            4332..6122
                     /locus_tag="VFV26_07540"
     CDS             4332..6122
                     /locus_tag="VFV26_07540"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX4846058.1"
                     /translation="MRKDLVFGMAGSGGDGIVSAGDSLLQAAAAEGYHGVMTKSFGSQ
                     IRGGESSCRVRISTTPILNPGGNLDVAVALNWEDFLKFGAELPVAGTTVVIYEAATGI
                     KESEIPLVGVTPLQVIAVPIAAMAKETAGTERAKNTVVLGLIAGWFGIGAVAVMKGIR
                     KKLAKKGEELVEANQRAFDAGRAFAMEHPLKTSMNVAASETKGQVKLITDGNDMCGAA
                     AIFAGCQFFGGYPITPSTEIMQFFTDHVWKYGGAVLQAEDEIAGIGAAVGASFAGKKA
                     MTATSGPGLSLKSEMMGLATIAELPLVIVDVQRGGPSTGLPTKTEQSDLFAAAFSAHG
                     DVIRPVLAPTSVADTFRITIEAFNIAEYYQTPVIVLSDQEIASRKETLDPIDTSQFKI
                     IERLRPSAADLVDYKRFKQTENHISPISHPGMLGGTYLASGIEHVESGAPTNSGNVHQ
                     RMNDKRTKKFDPLKDRKDLFEVTGNPDAPIAMVAWGSVAGVCREALAMAQAEGLNVKL
                     LVPYLLYPVAEGVYTDFFASVQKGLVIEQTHLAQTFKLLRMHLDLPKGVTSLARSGAN
                     PFLPGEIVAALHRLLSELQRSHEGNLQPQE"
BASE COUNT         1031 a         2188 c         2076 g          909 t
ORIGIN      
        1 cctccaggtg aagctcctgc gggtgctcca ggagcggcgg ctgcgccgcc tgggggccac
       61 cgaagagcgg cccgtggatg tgcgcgtcat cgccgccacc aaccgggacc tgcgcgcccg
      121 ggcggaatcc ggggccttcc gggacgatct gtactatcgc ctgaacatcc tccagatcga
      181 gctgccgccg ctgcgggagc ggctggagga cctgcccatc cttgcggagc atttcatccg
      241 gcgcttctgc cagaagctgg gcaagccccc catgcagctg cacgcggaca ccatggccca
      301 gctcctcgcc taccggtttc cgggcaacgt gcgggagctg gagaacctca tggagcgctg
      361 cgtggccctc aaccccggcg ggcccatcac ccgggatctg ctgcccgatg gcttcggcca
      421 ggcggcctcg gacgggctgg cccgccccgt gcccctggcc atcccgccgg aaggattcga
      481 tctggaggcc tggctcaacg ccctgaaggg ccacttcctc cggcgggccc tggaggacgt
      541 gggcggggtg aagaccaagg cgggcaagcg actgggcatg agcttccggg cctaccggta
      601 ctggctggcc gaactgggcg ggctggaggc gcttccgaag gacttcccct ggcctgcgga
      661 tttccccgcc ccggcggtgg acgaaggcgg gggaaccgaa ggcgccaagg aggcatgaag
      721 ccgatgaaac cttgcatttc aggccattcc tggcacactg gaacgctcgg atgcactgca
      781 gacgagcccc tctccctgga tcctcccatg accccgaacc ccgcctgccg acgagaccga
      841 ggcttctccc tgctggaact gctggtggcg atgatgatca tcgccgtgct gggcaccctc
      901 gggttctccc agtacaagaa gcactccgcc caggcgcgct acctcaaggc ccaggacgac
      961 ctgaagatcg tggccgaggg gctggatcag tactacctga agcatggccg cttcccggat
     1021 ttcggcagtt tcgacgccat gatcgacggc aactccaccc tggtgaagga aagcctcatc
     1081 aagcccggca tgggcccatt ggatcccttt ggccagccct acgaggggaa gtccacccgg
     1141 gtcacttatg agctgaagtg cgcgggcgac cccggcaatc cggaagacgc gggtcccatc
     1201 gtgcggaccc ccggccagat gacgaacacc tccccggtca gcgggcaggg tccgggcggc
     1261 gcccccaagg ccgatgcccc ggccgccgga gccccgaagt gatcgatctc cacaagctgc
     1321 ccgccgaggg cctgcgcctg aacggcacca ctggcgaagt ggcgctggag ggcggcgtgg
     1381 tgctgcggga cctgacctgg tccgtgttcg ccctggcctc cgatggcgac gtctttctgg
     1441 atgtgaaggg ccaggcggtg tggcagggcg cctgcagccg ctgcctcgcg cccctggacc
     1501 ggcccatcgc cgtggaaagc cagttcctgg gcagcaagga tcccgagctg gtgggccgcg
     1561 ggtcgcacac gctgggcacc caggacctgg acgtggtctt cctgccggag gacagcctgg
     1621 acgaggccga gctggtgcgc gagcagttcg agctccagtc ccccatgcac cccctctgtt
     1681 ccgagggctg caagggcctc tgccccgcct gcggcaagaa ctggaacaag ggaccctgcc
     1741 agtgccagcc ggaggccgtg caggctcctt ccgccctcaa caaggccctg accaaggctc
     1801 tggcgggaat caagctggac ccggaatcct gaaaccctta atctggaaca ttgtgtttta
     1861 cctctaggag caagccatgc cgaatcccaa gcgccgccat tccaaggccc gccgcgaccg
     1921 ccggcgcacc cacgacgcgc tggaagtcat gagcgccagc acctgcccca actgccagac
     1981 tcccaagctg ccccaccgcg tgtgccccag ctgcggcttc taccgcggca agctggccgt
     2041 ccgcgtcgcc gcgaacgctt aacagggttc gggtggacgg ccaccgcatc gcactggacg
     2101 tcatgggtgg cgacaacgcc ccccatgcga cgctgctggg cgcccgggag gccctcgagg
     2161 cctggccggg gctcttcctg ttcctcgtcg gggacgaggc cgtgctccgt ccggagctgg
     2221 cccggcacgg cttcacgccg gagctgatgg cccgcgccga agtggtgcac gcctcccaga
     2281 ccgtggtcat ggaagacaag gccaccagca tcctcaaaga gaagaaggac agctccatcc
     2341 gcgtggccgc ccagctcgtc cgcgaggggc gggcccacgg cgtggtgtcc atgggccata
     2401 ccggcgccgc catggtggcc tccagcctgg tcatcggcaa gctcgaaggc gtggaccggc
     2461 cggccctggc cagcgtcctg ccgaacatga agggcggccc cacggtcctg ctggacgtgg
     2521 gcgccaacgt ggacagccgg gccgagcaca tcgcccagtt cgcggtgatg ggttctgtct
     2581 acgccgaaga agtgctgggc ctcgaacggc cccgcgtggg catcctcagc gtgggcgagg
     2641 aggacggcaa gggaacggac gtgaccaagg aagcctccgc catgctgcgc cagatggaga
     2701 tccgcttcga aggcaacgcc gaaggccgcg acatctggaa cggcaccttc gatgtcatcg
     2761 cctgcgatgg cttcgtgggc aacgtggtgc tgaagtccag cgaggcgctg gccgagggca
     2821 tcatcggcgg cctgcgggag agcttcatgg cgacccccat caccaagctg gcgggcctca
     2881 tggcgaagcc cgccatgaag cgcttcaaga agaagctcga ctacgccgag tacggcggcg
     2941 cgccgctgct gggcgtgaag ggcgtgagca tcatcggcca cggccgcagc gaccacaagg
     3001 ccgtgcgcaa cgccatccgc gccgccctgc gcgccgccga gcaccgcctc cacgagcgca
     3061 tccaggagcg cgtggccctg ctgcttcccc aggactgaaa ccatccacca cggaggcacg
     3121 gaggccacgg agagaagaac acggagaggg caccgagaag cgaatctccg tgtttcctcc
     3181 gcgtcttcct cagcgaactc cgtgcctccg tggtgattct ttggagtttc cgatgagcaa
     3241 ggtggcgtgg ctgtttccgg ggcaggggtc gcaggcggtg ggcatgggcg tggcgctggc
     3301 cggggccgag ccggcggcga aggccgtgct ccaggaggcc gatggggccc tgggcttccc
     3361 cctgtcgcag ctcatggccg aagggcccga ggagaccctg aagctcacgg agcacaccca
     3421 gcctgccatc ctcacccaca gcaccatggt ggtccgggcc ttcgcctccc gcctgcccag
     3481 gcctgacttc gccgcgggcc actccctggg cgagtacagc gccctggtgg ccctgggcgc
     3541 gctggatttc gcggatgccg tccgcaccgt gcgggaacgc ggccgggcca tgcaggaggc
     3601 cgtgcccgtg ggcgtgggcg ccatggcggc catcctgggg atgagcctgg ccgatgtgga
     3661 ggccagctgc gccgaagcag cggcttcgac cgggaagatc gtggtgccgg cgaacttcaa
     3721 cggccccggc cagatcgtca tcgcgggcca tgcggaggcc gtggatgcgg ccctggaggc
     3781 cgtcaaggcc cggggcgggc gcaaggccat gaagctcccc gtgagcgcgc ccttccattc
     3841 gcccctgatg gaacccgcgc aggcccgcat ggagcccatc ctgcgggacc tcgtcttccg
     3901 ggcgcccatc tgccccctgg tgaacaatgt ggacgcagcc gcggtctcag gcccggaggc
     3961 cctccgcgac ggcctggtgc gccagattcc cggtgccgtg cgctggcagg ccaccctgga
     4021 tctgctgctg gatgagggcg tcaccacctt cctcgagctg gggcccggca aggtcctggc
     4081 gggtctggtg aagcgccagg ccaaggaccg ggggctggag gtcgccgcac tcagtttcgg
     4141 tgccccggaa gacctcgccc agttgggctg acaccgcggt ggcagggcct ccgcgccggg
     4201 aaggtgtgat gaaaagcaaa cccccgcggg agtagggtgg agaggacgcc actacgcctt
     4261 ccagcgtgcg gtgccgggcg gcgggatgtg gcccggtgtc cgttcatcac ccccctcagt
     4321 ccgaggtgcc catgcgcaag gatcttgtct tcggaatggc cggttcgggg ggcgatggca
     4381 tcgtctccgc cggcgactcc ctccttcagg ccgccgccgc cgagggctac cacggtgtga
     4441 tgaccaagag cttcggctct cagatccgcg gcggcgaatc ctcctgccgc gtgcgcatca
     4501 gcacgactcc catcctcaat cccggcggca acctggacgt ggccgtggcc ctgaactggg
     4561 aggacttcct caagttcggc gccgagctcc ccgtggccgg caccaccgtg gtgatctacg
     4621 aggccgccac gggcatcaag gagagcgaga tcccgctggt gggcgtgacg ccgctgcagg
     4681 tgatcgccgt ccccatcgcc gccatggcca aggagaccgc gggcaccgaa cgcgccaaga
     4741 acaccgtggt gctgggcctc atcgccggct ggttcggcat cggcgccgtg gcggtgatga
     4801 agggcatccg gaagaagctg gccaagaagg gcgaggagct ggtcgaagcc aaccagcgcg
     4861 ccttcgacgc gggccgggcc ttcgccatgg agcatcccct caagaccagc atgaatgtcg
     4921 ccgcctccga gaccaagggg caggtgaagc tcatcacgga cggcaacgac atgtgcgggg
     4981 cggcggccat cttcgcgggc tgccagttct tcggcggcta ccccatcacg ccctccaccg
     5041 agatcatgca gttcttcacg gaccatgtct ggaagtacgg cggcgccgtg ctccaggccg
     5101 aggatgagat cgcgggcatc ggggccgccg tgggcgcctc cttcgcgggc aagaaggcca
     5161 tgaccgccac cagcggcccc ggcctctcgc tcaagtccga gatgatgggc ctcgccacca
     5221 tcgccgagct gcccctggtg atcgtggacg tgcagcgcgg cggcccctcc acgggcctgc
     5281 ccaccaagac cgagcagtcc gacctcttcg ccgcggcctt ctccgcccac ggcgacgtga
     5341 tccgcccggt gctggcgccc acctccgtgg ccgacacctt ccgcatcacc atcgaggcct
     5401 tcaacatcgc cgagtactac cagacgccgg tgatcgtcct ctccgaccag gagatcgcct
     5461 cgcgcaagga gacgctggat cccatcgaca ccagccagtt caagatcatc gagcggctgc
     5521 gtccctccgc cgccgacctg gtggactaca agcgcttcaa gcagaccgag aaccacatca
     5581 gccccatcag ccaccccggc atgctgggcg gcacctacct ggcttcgggc atcgagcacg
     5641 tggaatccgg cgcgcccacg aacagcggca acgtccacca gcgcatgaac gacaagcgca
     5701 cgaagaagtt cgaccccctg aaggaccgca aggacctgtt cgaagtgacg ggcaaccccg
     5761 atgcgcccat cgccatggtg gcctggggca gcgtcgcggg cgtgtgccgc gaggccctcg
     5821 ccatggccca ggccgagggg ctgaacgtga agctgctggt gccctacctg ctgtatcccg
     5881 tggctgaggg ggtctacacc gacttcttcg cctcggtcca gaagggcctc gtcatcgagc
     5941 agacgcacct ggcgcagacc ttcaagttgc tgcgcatgca cctcgacctg cccaagggcg
     6001 tgacgtccct ggcccgcagc ggggccaacc ccttcctgcc cggcgagatc gtcgcggccc
     6061 tccaccgtct cctctcggag ctgcagcgca gccacgaggg caacctccag ccccaggagt
     6121 gaggtcgacc atgagcgcca cctgcgaatt ccaggcgaaa gactacaaga gtgacctcaa
     6181 gcccatctgg tgccccggtt gcgg
//
LOCUS       DASUDT010000367         5759 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1210126, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000367 DASUDT010000000
VERSION     DASUDT010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5759
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1210126"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1554)
                     /locus_tag="VFV26_07545"
     CDS             complement(28..1554)
                     /locus_tag="VFV26_07545"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4846059.1"
                     /translation="MSDRSRAATALAMSTLAFTLCFAVWTLNGVLVTFLVENGLFRWD
                     TAQLGWLIGIPVLTGSIMRLPVGLLTDRFGGRKVYTILLLLAAIPTWLLGSVQSYQGF
                     LLASLGFGLSGAAFAVGIAYSSVWFSKERQGTALGIFGAGNAGSALTSMGAPWLLKKL
                     TEGGANLEGWRMLPKLYAAALLVMAVVFFLATTERKVAGAKGKSLVQMLAPLRHVRVW
                     RFGLYYFLVFGCFVALAQWLIPYYVGVYGMSLAMAGLLASLFSLPSGLIRAAGGWMSD
                     RFGARAVMYWTFGLSIFACAALMVPRMSIESPGPSVLAQVGGVVTEVGPGRIVVGDTA
                     YALRAKGAELDAKDDRMMVLPQSRFWQTPVVKVGDRVKKKQLLASGTTHVFFQANVWI
                     FTFLVFVVGIVWGIGKAAVYRYIPDYFPDEVGVVGGIVGVIGGLGGFVGPILFGYLLR
                     ATGLWTTMWLFLTLLSVACLVWLHTVVRRLTREQNETLFTRFERPAPALSGADATEPA
                     "
     gene            complement(1640..1855)
                     /locus_tag="VFV26_07550"
     CDS             complement(1640..1855)
                     /locus_tag="VFV26_07550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6755 family protein"
                     /protein_id="HEX4846060.1"
                     /translation="MNTPRVRISPAALGVILVLLVIQLYLFETVLGAVLDGQRSVLPG
                     AFGVSLALSAIALFLAFRSTVEHRPRE"
     gene            complement(1852..2412)
                     /locus_tag="VFV26_07555"
     CDS             complement(1852..2412)
                     /locus_tag="VFV26_07555"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEX4846061.1"
                     /translation="MTWWRRAFPLELAEESHFSRREFGRFLAVVSAGFTTGIGYLWWR
                     KKPLEGASDPEAKHAEVPVALGLAADLKAGQSRLFKFRDEHDACILLRTPKGELRAYR
                     QTCTHLGCAVRFRDERLECPCHKGFFEVDRGFPVQGPPSRPLAAIALEERPDGTLWAV
                     GELPKPTLENLDRRAACPREKAEVIA"
     gene            complement(2412..2993)
                     /locus_tag="VFV26_07560"
     CDS             complement(2412..2993)
                     /locus_tag="VFV26_07560"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4846062.1"
                     /translation="MVPQDYGFFIDPQRCIGCRSCVGACAECGTHRGRSMIHLDEMDR
                     FDSPQTVPTVCMHCEDPICAQVCPSDAIKRSEDGVVHAAQKPRCIGCQNCELSCPFGV
                     PIVFSGLEQMLKCDLCYDRTSVGHKPMCATVCPSQALLFVRKDEVANLRHNKPLRDFL
                     IGSVRVKTKNAIMVPDPETPLHLDAALLIDGGL"
     gene            complement(2993..5254)
                     /locus_tag="VFV26_07565"
     CDS             complement(2993..5254)
                     /locus_tag="VFV26_07565"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HEX4846063.1"
                     /translation="MSTLPISQDQLRAQFGPHLNLAPPGGWLSDPTPDKVVETHCCFC
                     GQQCGIKLKVKDNKVIGFDPWEEFPFNEGKLCPKGVKRYLQGSHPDRLTRAMKRTERG
                     FEPMDWSEAMDRTVAEIQRIQQQHGKDAFAVLSGVSLTNEKSYLAGKFARLGLQTKNL
                     DYNGRLCMVSAGAGNKKAFGVDRAANSWADIEHAEVIWVAGSNVAECSPITTDYIWRA
                     RDRGALLIVVDPRITPLARTADLVLPLKPGTDSALTNGILHLLNKWNLIDRDFIQNHT
                     QGFEEALSAVKDCTPQWTSEKTGLPVEAIEKAARMWGEAKTSFLLHARGIEHQSKGVD
                     NVLGCINMVLATGRIGRPGCGYATITGQGNGQGGREHGHKCDQLPGNRDISNPEHRKY
                     ICSVWGCTDEELPGVGQSAQEIMNAIHAGEIKGLLLLCFNPLVSLPDSQFTREALSKL
                     EFFVCLDFFLSESAQHADIVLPSALHEEDEGTSTSAEGRVIKINKAVDCPGDARPDWQ
                     IMVELAKRLGRGKYFDHFKKPEDIFNELRVASKGGTADYAGITYEKIEKNMGIFWPCP
                     TEDHPGTPRLFEGGKFFHPDGKAKFNPTPWRPPMEVVDDDYPIWLTSGRVVFHYLSGT
                     QTRRIGFLVEQCPHPYLEIHPRLAEQYGLAEGDAVEITSRRGTMVLPAQVVKTIRPDP
                     VFIPYHWAGALSANRLTARHLDPVSKIPEFKVSAVRLKKTTKDQFSPELAELQRMAFE
                     ARSTQSQMPEQVF"
     gene            complement(5251..>5759)
                     /locus_tag="VFV26_07570"
     CDS             complement(5251..>5759)
                     /locus_tag="VFV26_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846064.1"
                     /translation="QRFDLDLLPLVLLIAVSLTGLLLTASETWLQGRNFATLAFLHEL
                     TVILLLLGLPFGKLFHVVQRPAQVGVAIYKAEGEAEGRLACKGCGTAFIRANQHRDLV
                     ALWKELELDGARHSGEVHHLDLCPRCKRRLVAKAQGLRLHGAFDPFATIPVHAEPIPD
                     SISLKGSR"
BASE COUNT          930 a         1801 c         2119 g          909 t
ORIGIN      
        1 ttcggtgagc ttggacatgg ggggctccta ggcgggttcc gtggcgtccg cgccagagag
       61 ggcgggcgcg ggtcgctcga atcgggtgaa gagggtctca ttctgctcgc gggtgaggcg
      121 ccgcaccacg gtatgcagcc agaccaggca ggccacggac aggagggtga ggaacagcca
      181 catggtggtc cacaggcccg tggcgcggag caggtagccg aagaggatgg ggcccacgaa
      241 gcccccaagg ccgccgatga cacccacgat gccgccgacc acgcccacct cgtcggggaa
      301 gtagtccggg atgtagcggt agacggcggc cttgccgatg ccccacacga tgcccaccac
      361 gaagaccagg aaggtgaaga tccacacgtt ggcctggaag aagacatggg tcgtgcccga
      421 ggcgagcagc tgcttcttct tgacccggtc gcccaccttc accacgggag tctgccagaa
      481 gcggctctgg ggcagcacca tcatgcggtc gtccttggca tccagctccg cgcccttggc
      541 gcggagggcg taggcggtgt cccccaccac gatgcgcccg gggcccacct cggtcacgac
      601 gccccccacc tgggccagca ccgagggccc ggggctctcg atggacatgc ggggcaccat
      661 gagggccgcg caggcgaaga tgctgaggcc gaaggtccag tacatcaccg cccgggcgcc
      721 gaagcggtcc gacatccagc ccccggcggc acggatgagg cccgagggca ggctgaagag
      781 ggaggccagc agccccgcca tcgccaggct catgccgtag acgcccacgt agtaggggat
      841 cagccactgg gccagggcca cgaagcagcc gaagaccagg aagtagtaga ggccgaagcg
      901 ccacacgcgg acatggcgga ggggggccag catctggacg agggatttgc ccttggcccc
      961 ggcgaccttc cgctccgtgg tggccaggaa gaacaccacc gccatgacca gcagggccgc
     1021 ggcatagagt ttcggcagca tccgccagcc ctccaggttc gcgccgccct cggtgagctt
     1081 cttgaggagc cagggggcgc ccatgctggt gagggccgag cccgcgttgc ccgcgccgaa
     1141 gatccccagg gccgtgccct ggcgttcctt gctgaaccac acgctggaat acgcgatgcc
     1201 cacggcgaag gcggcgcccg agaggccgaa gcccagggag gccagaagga agccctggta
     1261 gctctggacg ctgcccagca gccaggtggg gatggcggca aggagcagca ggatcgtgta
     1321 gaccttccgt cccccgaagc ggtccgtgag gaggcccacg ggcagccgca tgatggagcc
     1381 cgtgagcacg gggatgccga tgagccatcc gagctgggcc gtgtcccaac ggaagaggcc
     1441 gttctccacc aggaaggtga cgaggacccc gttcagggtc cacacggcga agcagagggt
     1501 gaaggccagg gtgctcatgg ccagggcggt ggcggctcgg gatcgatccg acatgaacgg
     1561 ctccgggatg tctctaaaag gattaaaaag tcttaaataa gggcaggtcc gtggcgtggg
     1621 gcgctggtgg tgcggaagct tattccctgg gccggtgctc cacggtgctg cggaaggcca
     1681 ggaacagcgc gatggctgag agggcgaggg acacgccgaa ggctccgggc aggacgctgc
     1741 gctggccgtc caggacggcg cccagcacgg tctcgaagag gtagagctgg atcaccagca
     1801 gcacgaggat gacgcccagg gcggcggggg agatgcggac gcggggggtg ttcatgcgat
     1861 cacctcggcc ttctcgcggg ggcaggctgc ccggcggtcc aggttctcca gagtgggttt
     1921 gggcagctcg cccacggccc agagggtgcc atcggggcgc tcctccaggg cgatggcagc
     1981 cagggggcgg ctgggcgggc cctgcacggg aaagccgcgg tccacctcga agaacccttt
     2041 atggcagggg cattccagcc gctcgtcccg gaaccgcacg gcgcagccca ggtgggtgca
     2101 ggtctggcgg taggccctca gctcgccctt gggcgtgcgc aggaggatgc aggcatcgtg
     2161 ctcgtcgcgg aacttgaaga ggcggctctg gcccgccttc agatcggcgg ccaggcccag
     2221 ggccaccggc acctcggcgt gtttcgcctc ggggtcggag gcgccctcga ggggcttctt
     2281 ccgccaccag aggtagccga tgccggtggt gaatccggcg ctcaccacgg ccaggaaccg
     2341 gccgaactcg cggcgggaga aatggctctc ttcggccagt tcgaggggga aggcgcggcg
     2401 ccaccaggtc atcacaggcc tccatcgatc aagagggccg cgtccagatg caggggcgtt
     2461 tccggatcgg gcaccatgat ggcgttcttg gtcttcaccc gcacgctgcc gatgaggaag
     2521 tcgcgcaggg gcttgttgtg gcgcaggttc gccacctcgt ccttgcggac gaagagcagg
     2581 gcctggctgg ggcagaccgt ggcgcacatg ggcttgtggc ccacggaggt gcggtcgtag
     2641 cagaggtcgc acttgagcat ctgctccagg cccgagaaca cgatgggcac gccgaagggg
     2701 cagctcagct cgcagttctg gcagccgatg cagcggggct tctgggcggc atgcaccacg
     2761 ccgtcctcgc tgcgcttgat ggcgtccgag gggcagacct gggcgcagat gggatcctcg
     2821 cagtgcatgc agaccgtggg cacggtctgg gggctgtcga agcggtccat ctcgtccagg
     2881 tggatcatgg accggccacg gtgggtgccg cactcggcgc aggcgcccac gcaggagcgg
     2941 cagccgatgc agcgctgggg gtcgataaaa aagccgtagt cctggggcac catcagaaca
     3001 cctgctcggg catctgggac tgggtgctgc gggcctcgaa ggccatgcgc tgcagctccg
     3061 ccagctcggg ggagaactgg tccttggtgg tcttcttgag gcgcacggcg ctcaccttga
     3121 actcggggat cttggagacg ggatccaggt gccgggccgt gaggcggttg gccgacaggg
     3181 ccccggccca gtggtagggg atgaagacgg ggtcggggcg gatggtcttc accacctggg
     3241 cgggcagcac catggtgccg cgccgggagg tgatctccac ggcatcgcct tccgccaggc
     3301 cgtactgctc cgccaggcgg gggtggatct ccaggtaggg atgggggcac tgctccacca
     3361 ggaagccgat gcggcgtgtc tgggtgccgc tgaggtagtg gaagaccacg cggcccgagg
     3421 tgagccagat ggggtagtcg tcatccacca cttccatggg cggccgccag ggcgtgggat
     3481 tgaacttcgc cttgccgtcc gggtggaaga atttgccacc ctcgaagagg cgcggcgtgc
     3541 ccgggtggtc ctccgtgggg cagggccaga agatgcccat gttcttctcg atcttctcgt
     3601 aggtgatgcc cgcgtagtcc gcggtgccgc ccttcgacgc cacccgcagc tcgttgaaga
     3661 tgtcctcggg cttcttgaag tggtcgaagt acttgccgcg gcccagccgc ttcgccagct
     3721 ccaccatgat ctgccagtcc gggcgggcgt cgccggggca gtccacggcc ttgttgatct
     3781 tgatgacgcg gccctcggcg ctggtggagg tgccctcgtc ctcctcgtgc agggccgaag
     3841 gcagcacgat gtcggcgtgc tgggcgcttt cgctgaggaa gaaatccagg cagacgaaga
     3901 actccagctt gctgagggcc tcgcgggtga actgggaatc cggcagggag accagcgggt
     3961 tgaagcagag cagcagcagg cccttgatct cgccggcgtg gatggcgttc atgatctcct
     4021 gggcgctctg gcccacgccc ggcagctcct catcggtgca gccccagacg gagcagatgt
     4081 acttccggtg ctcggggttg ctgatgtcgc ggttgcccgg cagctggtcg cacttgtggc
     4141 cgtgctcgcg gccgccctgg ccgttgccct ggcccgtgat ggtggcgtag ccgcagccgg
     4201 gccggccgat gcggcccgtg gccagcacca tgttgatgca gcccaggacg ttgtccacgc
     4261 ccttgctctg gtgctcgatg ccccgggcgt gcagcaggaa gctggtcttg gcctcgcccc
     4321 acatgcgggc ggccttttcg atggcctcca ccggcaggcc cgtcttctcg ctggtccact
     4381 ggggggtgca gtccttcacc gcgctcaagg cttcttcgaa gccttgagtg tggttctgga
     4441 tgaaatcacg gtcgatgagg ttccacttgt tcagcaggtg caggatgccg ttggtgaggg
     4501 ccgaatccgt gccgggcttc aggggcagca ccaggtcggc ggtgcgggcc aggggcgtga
     4561 tgcgggggtc caccacgatg agcagggcgc cgcggtcccg ggcccgccag atgtagtccg
     4621 tggtgatggg cgagcactcg gccacgttgg agcccgccac ccagatcacc tcggcgtgtt
     4681 cgatgtcggc ccaggagttg gcggcgcggt ccacgccgaa ggccttcttg ttgccggcac
     4741 cggcgctcac catgcaaagg cggccgttgt agtcgaggtt cttggtctgc aacccgagcc
     4801 gcgcgaactt gcccgccagg tagctcttct cgttggtgag cgacacgccg gacagcactg
     4861 cgaaggcgtc cttgccgtgc tgctgctgga tgcgctggat ctccgccacg gtgcggtcca
     4921 tggcctcgct ccagtccatg ggttcgaagc cccgctcggt gcgcttcatg gccctggtga
     4981 ggcggtccgg gtggctgccc tgcaggtagc gcttcacgcc cttgggacag agcttcccct
     5041 cgttgaaggg gaattcctcc cagggatcga agccgatgac cttgttgtcc ttcaccttga
     5101 gcttgatgcc gcactgctgg ccgcagaagc agcagtgggt ctccaccacc ttgtcgggcg
     5161 tggggtcgga cagccagccc cccggtgggg ccaggttcag gtgggggccg aactgggcgc
     5221 ggagctggtc ctgggaaatg gggagggtgc tcatcgggaa cccttcaggc tgatggaatc
     5281 ggggatgggc tcggcgtgca cggggatggt ggcgaaggga tcgaaggcgc cgtggagcct
     5341 caggccctgg gccttggcca ccaggcggcg cttgcaccgg gggcagaggt ccaggtggtg
     5401 gacctccccg ctgtgccggg ccccatccag ttcaagttcc ttccacaggg ccaccagatc
     5461 acggtgctgg ttggcccgga tgaaggccgt gccgcagccc ttgcaggcca ggcgcccttc
     5521 ggcctcgccc tcggccttgt agatcgccac gcccacctgg gcgggccgct ggaccacgtg
     5581 gaagagcttg ccgaagggca ggcccagcag gagaaggatc accgtcagct cgtgcaggaa
     5641 ggccagggtg gcgaaattgc ggccctggag ccaggtctcg gaggccgtga gcagcaggcc
     5701 cgtgaggctc acggcgatga ggagcaccag gggcagcaga tccaggtcga agcgctggg
//
LOCUS       DASUDT010000368         2078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1276643, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000368 DASUDT010000000
VERSION     DASUDT010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1276643"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VFV26_07575"
     CDS             <1..605
                     /locus_tag="VFV26_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846065.1"
                     /translation="RAAFDWVDPIRDGQGRLTGEKGRTRLELPSFVGFEGQDVVTVPA
                     GYLVDPAFAPAVLPLLQAHGLKVLKGSARPRNLALLHFHESSRKLSASAYQGVFTLEL
                     QGAWKAEPASKKLQMPWAPADLDHALYIPLDQPLGRLAFYLLDPRSTDSLAFWGLFHS
                     ALVRGNGMWGEPPRFPILAVGKSDSSLVTVQHSPAPQAQE"
     gene            complement(657..1388)
                     /locus_tag="VFV26_07580"
     CDS             complement(657..1388)
                     /locus_tag="VFV26_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4846066.1"
                     /translation="MSGHSKWSTIKHKKGAADAKRGKVFTKILKEITVAARLGGGDVA
                     SNPRLRLAVDQAKGSNMPKDNWERAIKKGTGELEGVTYEEVVYEAYGPGGVAILVEAM
                     TDNKNRTTPEVRSYFTKFGGELGAMGSVAYLFTKQGQIVVEPEVSEDQIMEVALEAGA
                     DDVVNEGGAWVIKTSPEAYQAVKDAVDAAKLPVIEAKIIMAPSTSTALEGSKLTSFLK
                     LVDLLEDNDDVQNVWHNGDYEEPED"
     gene            complement(1513..>2078)
                     /locus_tag="VFV26_07585"
     CDS             complement(1513..>2078)
                     /locus_tag="VFV26_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846067.1"
                     /translation="RIFTQAGELLKKQQFDKAIEVMKEGYRFAPKQFLVKGSIDGQIG
                     VVQYLRKKNEEAEPLLAAASMQHYIAKAMLGILQWKRGEKKKAKETFALALKAGKKES
                     LLYAVYAYVLVEMGERDKAIEILNQGLGICKGDERLITNRNLLQNGKALKMKVYGEQW
                     YQFLLERPMIRQEAPAFARVSRRALRG"
BASE COUNT          295 a          690 c          664 g          429 t
ORIGIN      
        1 aacgcgccgc gttcgactgg gtggacccca tccgcgacgg gcaggggcgc ctgacgggcg
       61 agaagggccg cacccgcctg gagctgccca gcttcgtggg cttcgaaggc caggatgtcg
      121 tgacggtccc ggcgggctac ctggtggacc cggcctttgc gcctgccgtg ctgccgctgc
      181 tccaggccca tggcctgaag gtcctgaagg gcagcgcgag gccacggaac ctggccctcc
      241 tgcatttcca tgagtccagc cgcaagctgt ccgcctcggc ctaccagggc gtgttcacac
      301 tggagctgca gggcgcctgg aaggctgaac ccgcgtcgaa gaagctgcag atgccctggg
      361 cgcccgccga cctggaccac gccctctaca ttcccctcga tcagcccctg ggccgcctgg
      421 ccttctacct gctggatccc cgcagcaccg acagcctggc cttctggggc ctcttccaca
      481 gcgccctcgt ccgcggcaac ggcatgtggg gcgaaccgcc ccggttcccc atcctggcag
      541 tgggaaagtc cgattccagc ctcgtgaccg ttcagcattc ccctgcgccg caggcgcagg
      601 aatagctcgg ggcgccgaaa ggcgccccga gcttgccgaa cgctaagttt ggaacctcag
      661 tcttcgggtt cctcatagtc gccgttgtgc cacacattct gcacatcgtc gttgtcctcg
      721 agcagatcca ccagcttgag gaagctggtg agcttggagc cttcgagggc cgtgctggtg
      781 ctgggggcca tgatgatctt ggcctcgatg acgggcagct tggcggcgtc cacggcatcc
      841 ttcacggcct ggtaggcctc ggggctggtc ttgatgaccc aggccccgcc ttcgttgacc
      901 acgtcgtcgg cgccggcttc cagggccact tccatgatct ggtcctcgga gacttcgggc
      961 tcgaccacga tctggccctg cttggtgaac aggtaggcca cggagcccat ggcgcccagc
     1021 tctccgccga acttggtgaa gtagctccgg acttcgggtg tggtgcggtt cttgttgtcc
     1081 gtcatggcct cgaccaggat ggccacgccg ccggggccgt aggcctcgta gaccacttcc
     1141 tcgtaggtca cgccttcgag ttcgccggtg cccttcttga tggcgcgctc ccagttgtcc
     1201 ttgggcatgt tgctgccctt ggcctggtcc acggccaggc gcaggcgggg gttgctggcc
     1261 acatcgccgc cgcccaggcg ggcggccacg gtgatctcct tgaggatctt cgtgaagacc
     1321 ttgccgcgct tggcatcagc ggcacccttc ttgtgcttga tggtggacca tttgctgtgg
     1381 ccggacatag aggttgctcc ttcaatcaat cgttcgttct gctcagcaac cgcttcgcgt
     1441 ttgctgagta ggggaagaga gtcttttcaa tgcttcggaa tcgacgcatg gcggcggttt
     1501 cgaagccggg tctcacccac gcagcgcccg gcgcgacacc cgcgcgaagg ccggggcctc
     1561 ctggcggatc atggggcgtt cgaggaggaa ctggtaccac tgctcgccgt agaccttcat
     1621 cttgagggcc ttgccgttct gcagcaggtt gcggttggtg atgaggcgct cgtcgccctt
     1681 gcagatgccc agcccctggt tgaggatctc gatggccttg tcgcgctcgc ccatctccac
     1741 cagcacatag gcgtagaccg catagagcag gctttccttc ttgccggcct tgagggccag
     1801 ggcgaaggtc tccttggcct tcttcttctc gccgcgcttc cactggagga tgcccagcat
     1861 ggccttggcg atgtagtgct gcatggaggc ggcggccagc aggggctcgg cctcctcgtt
     1921 cttcttgcgg aggtactgca ccacgccgat ctggccgtcg atgctgccct tcacgaggaa
     1981 ctgcttgggg gcgaagcggt agccctcctt catcacctcg atggccttgt cgaactgctg
     2041 cttcttcagg agctccccgg cctgggtgaa aatgcgct
//
LOCUS       DASUDT010000369         2111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1475519, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000369 DASUDT010000000
VERSION     DASUDT010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475519"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VFV26_07590"
     CDS             <1..584
                     /locus_tag="VFV26_07590"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEX4846068.1"
                     /translation="AHLERLRAGAAALGSGVPWLAEAGLELAQWLGGLGLPEAALRLE
                     LDLDRHRLEARLEPLPRAPSPFRLAPMPHPMGDLRPQPLARHKGLSGPWRPEALAGAR
                     QRGAEDALLLWPDGTLAESTIATVALERQGALVLPPPPGRVASVAERLDLPAWAEARG
                     WALHISPIALGDCEGGQLWCLNALRGLWPATLL"
     gene            642..2036
                     /gene="glmU"
                     /locus_tag="VFV26_07595"
     CDS             642..2036
                     /gene="glmU"
                     /locus_tag="VFV26_07595"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEX4846069.1"
                     /translation="MSTVAVILAAGLGTRMKSRLPKVLHPILGDPSLLWALRALPQGL
                     GGAVVVVHHGKELVLAALDAWAKAGLLPCPVSAVDQGEPLGTGHALQVCIPELDRLGA
                     AQVAILCGDVPLTTPATVARLCGAGALLLAMDLPSPGSYGRVIQHPDGRLAGLVEAKD
                     ATAEQLAIQRVNGGAYALPWPALRKALQDLKNDNAQKEYYLTDAVAAVAREIPVAVAA
                     CDPEELAGMNSRQDQAALQAAAQRRIHRHWMAEGVTFLHADSTLVGPRVILQRDVTLE
                     PGVRLEGSVHVGEGCRIGQGSVITDSVLGDDVEVRPYSVIERAQVGANAKIGPFSRLR
                     EGTELAENVHIGNFVETKKARLHRGAKANHLAYLGDAEIGEGTNIGAGVITCNYDGVN
                     KHRTTIGRSVFVGSDTQLVAPVTIGDGALIGAGSTITKDVPADALALSRTPQATLEGA
                     ASRLRSKQRKAGSS"
BASE COUNT          312 a          756 c          744 g          299 t
ORIGIN      
        1 aagcccacct ggagcgcctt cgcgccgggg ccgccgccct gggatccggc gtcccctggc
       61 tggccgaggc ggggctggaa ctcgcccagt ggctgggggg gctaggcctt ccagaagccg
      121 cgctgcgcct ggaactcgac ctggaccgac accgactgga ggcgcgcctg gaaccgctgc
      181 cccgggcgcc ctctcccttc cgcctggccc ccatgcccca tcccatgggt gatctgcgcc
      241 ctcagcctct cgcccgccac aagggtctct ccgggccttg gcgacccgag gcccttgccg
      301 gggcccggca acgcggtgcg gaggatgccc tgctgctgtg gccggacggc accctggcgg
      361 agagcaccat cgccacggtg gcgctggaac ggcagggcgc gctggtcctg ccccccccgc
      421 cgggccgcgt ggccagtgtg gctgaacggc tggacctccc cgcctgggcc gaggcgcggg
      481 gctgggccct gcacatcagc cccatcgccc tgggggactg cgaaggcggg cagctctggt
      541 gcctcaatgc ccttcgaggc ctctggcccg ccaccctgct gtgagagggc ctgacaagac
      601 cctgcgggac cgcctgttgt aggctggaag cgggaggcag catgtcgacg gtggcagtga
      661 tcctggcggc gggactcggg acccgcatga aatcgcggct tcccaaggtg ctgcacccca
      721 tcctgggcga cccctcgctg ctgtgggcgc tgcgggcgct gccgcagggc ctcggtggcg
      781 ccgtggtggt ggttcatcac ggcaaggagc tggtgctcgc ggccctggat gcatgggcga
      841 aggccgggct cctgccctgc cccgtcagcg ccgtggatca gggcgaaccc ctgggcacag
      901 gccatgcgct ccaggtctgc atccccgagc tggaccgcct cggcgccgcg caggtggcga
      961 ttctctgcgg cgacgtgccc ctcaccaccc ccgccaccgt ggcccggctc tgcggcgccg
     1021 gggcgttgct gctggccatg gatctgcctt caccgggctc ctacggccgc gtgatccagc
     1081 atccggacgg ccgcctggca gggctcgtgg aggccaagga cgccacggcg gagcagctgg
     1141 cgatccagcg tgtgaatggc ggtgcctatg cgctgccctg gcccgccctg cgcaaggccc
     1201 tccaggacct gaagaacgac aacgcccaga aggagtacta cctcaccgac gccgtggcgg
     1261 ccgtggcccg ggagatcccc gtggccgtgg cggcctgtga tccggaggaa ctggccggca
     1321 tgaactcgcg gcaggaccag gcggcgctgc aggccgcggc ccagcggcgg atccaccggc
     1381 actggatggc ggaaggcgtc accttcctcc acgcggacag caccctggtg ggtccgcggg
     1441 tcatcctcca gcgcgatgtc acactggaac ccggcgtccg gctggagggt tcagtccatg
     1501 tgggtgaggg ctgccgcatc ggccagggtt ccgtgatcac ggacagcgtt ctgggcgatg
     1561 acgtggaggt ccgtccctac agcgtcatcg agcgggccca ggtgggcgcg aacgccaaga
     1621 tcggtccgtt ctcgcgcctg cgggagggca cggaactggc cgaaaacgtc cacatcggca
     1681 acttcgtgga aacgaagaaa gccaggctgc accggggtgc caaggccaac cacctggcct
     1741 acctcgggga tgcggagatc ggcgaaggca cgaacatcgg cgccggcgtc atcacctgca
     1801 actacgatgg ggtgaacaag caccggacca ccatcgggcg aagcgtcttc gtggggtccg
     1861 acacccagct ggtggctcct gtgaccatcg gggatggggc cctcatcggc gccggcagca
     1921 ccatcaccaa ggatgtgccc gccgatgccc tggccctgag ccgcacgcca caggccacgc
     1981 tcgaaggcgc cgcctcccgg ctccgatcga agcagaggaa ggccggaagt tcctagcggc
     2041 cccaacgaac cgccgccgag tgtggaactg ccctctgagg taagctggtt ctctaccccc
     2101 ggagccccat g
//
LOCUS       DASUDT010000370         4598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1762692, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000370 DASUDT010000000
VERSION     DASUDT010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762692"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VFV26_07600"
     CDS             <1..325
                     /locus_tag="VFV26_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846070.1"
                     /translation="VESEGILRMLLLVLALAMPLGTMAYLKIQSTRLSYAMGDLKERI
                     RKEEEFQRKLLLERSRFQRDEEVQGYAQKAGLQPRKQGHLIRRAFTPEDQRIAKLRPV
                     PSDGL"
     gene            381..2522
                     /locus_tag="VFV26_07605"
     CDS             381..2522
                     /locus_tag="VFV26_07605"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX4846071.1"
                     /translation="MSLRFATDPRISRRLLGRQDPQDLLNRRMPLIMGSMGFWALLIL
                     LRLLWLQGVEHRKYRARADQQHTTIVPIPPIRGELRDRRGEPLAISIKVESLFADPRV
                     FYPDYRPGKGEERQWGQPDRKAAAEVAAKLAPFLEQTRAQVLEKLLRKKTFVYLERHM
                     APARAQAVRALNLDGIEFQPESRRFYPRGSLAAQVLGFTNIDGAGQLGIEQTYDKQLA
                     GVKGELIAPKDAHGKLLILQENYSQMPVNGASLQLSLDASIQHIVENALEEGVRLSRP
                     RTAYAVVVDPRTGEILAIAGTPTFDPNQILPKKFRNRAEGDLSQAEREELRRELERQK
                     AARKVHPVEDVYEPGSTMKIFTAAMALEERKVRLGERIDCMGGRWLYSPKIPPITDTH
                     RHGLLSFEEVMWQSSNIGAAKMGIRLDPAMHYQYLRKFGFGDPTGLNFPGESAGRLIA
                     PDRWTVPTQYTLSYGYGLNTTPLQILMAGCALANGGKLMQPILVQRIYNDKGLLLKEF
                     KPTVRAQVLSEETANMMKETLKGVITQGTGKKAMLDNGVESFGKTGTSRKLIDGKYDP
                     KRHFASFMGFFPADKPQYGVLVMLDDPAGDTTGGDVAAPLFKRIGDGILRFRQTTPDP
                     DRESDLKLSLRDWPVSETDEAALHVERGRVPDLKGLSLKAAIHRVVLVGGSPKVEAAP
                     GPTATHVVGQSPEPGTPLEPGAVVKIKAGMP"
     gene            2519..3988
                     /locus_tag="VFV26_07610"
     CDS             2519..3988
                     /locus_tag="VFV26_07610"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEX4846072.1"
                     /translation="MKLDALINGIALRRSGPDAEVVDLTSDSREVGPGWAFLALKGEQ
                     VDGAAFVPQALAQGASAIFSASGVSTPESVADCAFTGDPRLQMAELARRLHGEPDRRL
                     ALIGVTGTNGKTTTTTLIRQLLRGAGISCGLVGTVMNAAGEREEEAVRTTPESPAFYR
                     WLHRSVDAGDAASAVEVSSHALCLGRVHGARFQVGVFTNLTQDHLDYHGTLEAYFEAK
                     HRLVAQCERFLVNADDPWGRGLLEREGHVSYAVDRPACYRAHGLDLGPTGTRFTLHSA
                     QGSWDVQSPLLGRFNVYNLVAALAACAEAGFDLDRLVPAARKVTGAPGRLERVDCGQP
                     FGVMVDYAHTPDALEKLLAEGRRLLPPGGRLHVLFGCGGDRDRAKRPLMAAAVAAGAD
                     VLWHTSDNPRTEDPERILDDAAPGIPEALRADAARYHRNADRRGSVRQALADCRPGDL
                     LLLAGKGHEPYQEIHGVKHPYSDRAAVEAALAHPFRVGP"
     gene            4170..>4598
                     /locus_tag="VFV26_07615"
     CDS             4170..>4598
                     /locus_tag="VFV26_07615"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEX4846073.1"
                     /translation="MTRLRHVAGPEDPAILEAAAILALGGLVAFPTETVYGLGADGLN
                     PEAVARIYAAKGRPATNPVILHVADASAARALVSHWPAEAQALAERFWPGPLTLVLPA
                     SMAVPSIVRAGGPSVALRCPAHPVALALIRAAGRPLAAPSA"
BASE COUNT          724 a         1690 c         1546 g          638 t
ORIGIN      
        1 ggtcgagagc gagggcatcc tgcggatgct gctcctggtg ctggccctgg ccatgcccct
       61 ggggacgatg gcctatctga agatccagag cacgcgtctg agctatgcca tgggcgacct
      121 caaggagcgc atccgcaagg aggaggaatt ccagcgcaag ctcctgctgg agcgcagccg
      181 cttccagcgg gacgaggagg tccagggcta cgcccagaag gcgggcctcc agccccgcaa
      241 gcagggccac ctgatccggc gggccttcac gcctgaggac cagcgcatcg ccaagctgcg
      301 ccccgtgccg tcggatgggc tgtagtctgt aggctgtggg cctccgcccg cgcccattcc
      361 gctcagcccc cggccttccc gtgtccctcc gcttcgccac cgacccacgc atctcccggc
      421 gcctgctggg ccggcaggat ccccaggacc tgctgaaccg gcgcatgcca ctgatcatgg
      481 gcagcatggg cttctgggcc ctgctcattc tgttgcggct gctctggctg cagggggtgg
      541 agcaccgcaa gtaccgggcg agggccgacc agcagcacac caccatcgtg cccatccccc
      601 ccatccgcgg cgagctgcgg gaccgccgcg gggaacccct ggccatctcc atcaaggtgg
      661 agagcctctt cgcagatccc cgcgtgttct acccggacta ccggccgggg aagggcgagg
      721 aacggcagtg gggacagccc gaccgcaagg ctgccgcgga ggtggccgcc aagctcgcgc
      781 ccttcctcga acagacccgg gcccaggtgc tggagaagct gctccgcaag aagaccttcg
      841 tctacctcga gcggcacatg gcccccgccc gggcccaggc tgtgcgggcc ttgaacctgg
      901 acggcatcga gttccagccc gaaagccgcc gcttctaccc ccggggcagc ctggcggcgc
      961 aggtcctcgg cttcaccaac atcgacggcg cgggccagct gggcatcgag cagacctacg
     1021 acaagcagct ggcgggcgtg aagggcgagc tgatcgcacc caaggacgcc cacggcaagc
     1081 tgctcatcct ccaggagaac tacagccaga tgcccgtgaa cggcgcctcg ctgcagctca
     1141 gcctggacgc ctccatccag cacatcgtcg agaacgccct ggaggagggc gtgcgcctgt
     1201 cgcggccgcg cacggcctat gcggtggtgg tggatccccg gacgggcgag atcctggcca
     1261 tcgcgggcac ccccaccttc gatccgaacc agatcctgcc caagaagttc cggaaccgcg
     1321 cggagggcga cctctcccag gccgagcggg aggagctgcg ccgcgagctg gagcgccaga
     1381 aggccgcccg caaggtgcat cccgtggagg acgtctacga gcccgggtcc accatgaaga
     1441 tcttcaccgc ggccatggcc ctggaggaac gcaaggtccg cctgggcgag cgcatcgact
     1501 gcatgggggg ccgctggctc tacagcccca agatcccccc catcacggac actcaccggc
     1561 acgggctgct gtccttcgaa gaggtcatgt ggcagagctc caacatcggc gccgccaaga
     1621 tgggcatccg cctcgatccc gccatgcact accagtacct gcggaagttc ggcttcggcg
     1681 atcccacggg cctgaacttc cccggcgaaa gcgccggccg cctcatcgcc ccggaccgct
     1741 ggaccgtgcc cacccagtac accctgtcct acggctacgg cctcaatacg acaccgctcc
     1801 agatcctcat ggccggctgc gccctggcca acggcggcaa gctcatgcag cccatcctcg
     1861 tgcagcgcat ctacaacgac aagggcctgc tgctgaagga attcaagccc accgtgcggg
     1921 cccaggtcct cagcgaggag acggcgaaca tgatgaagga gacgctcaag ggcgtcatca
     1981 cccagggcac ggggaagaag gccatgctcg acaacggcgt ggaatccttc ggcaagaccg
     2041 gcaccagccg caagctcatc gacgggaagt acgacccgaa gcgccatttc gcctccttca
     2101 tggggttctt tcccgccgac aagccccagt acggtgtgct ggtgatgctg gacgatcccg
     2161 cgggggacac caccggcggc gacgtggcgg cgcccctgtt caagcgcatc ggcgatggca
     2221 tcctgcggtt ccggcagacc actccggatc ccgaccgcga gtcggacctg aagctgtccc
     2281 tgcgggactg gcccgtgagc gaaaccgacg aggcggcgct gcatgtggag cggggccggg
     2341 tgcccgacct caaggggctc agcctcaagg ccgccatcca ccgggtggtg ctggtgggcg
     2401 ggagccccaa ggtggaggcc gcgcccgggc ccacggccac ccatgtggtg ggccagagcc
     2461 ccgagcccgg cacgccgctg gagccgggtg ccgtggtgaa gatcaaggcg gggatgccat
     2521 gaagctcgat gcgctcatca acgggattgc cctccggcgc tccggcccgg acgctgaggt
     2581 cgtggacctc accagcgaca gccgcgaggt gggccccggc tgggcctttc tcgcgctgaa
     2641 gggcgagcaa gtcgatggcg ccgccttcgt gccgcaggca ttggcgcaag gcgccagcgc
     2701 catcttttct gcttccggcg tgtcgacgcc ggaatccgtt gcggactgcg ccttcacggg
     2761 ggatccccgc ctgcagatgg ccgagctggc ccgccgcctg cacggcgaac cggaccgccg
     2821 cctggcgctc atcggcgtca cgggcaccaa cggcaagacc accaccacca cgctcatccg
     2881 ccagctgctg cggggcgcgg ggatcagctg tggcctcgtc ggcacggtca tgaacgccgc
     2941 gggcgaacgg gaggaagagg ctgtccgcac cacgcccgaa agcccggcct tctaccgctg
     3001 gctgcaccgc agcgtggacg cgggcgatgc ggcctcggcg gtggaggtga gcagccatgc
     3061 cctctgcctg ggccgggtcc acggggcccg cttccaggtg ggcgtcttca ccaacctcac
     3121 ccaggaccac ctggactacc acggcaccct ggaggcctac ttcgaggcca agcaccgcct
     3181 cgtggcccag tgcgagcgct tcctggtgaa cgcagacgat ccctggggcc ggggcctgct
     3241 ggagcgggaa ggccacgtca gctacgccgt ggaccggccc gcctgctacc gcgcccacgg
     3301 cctggacctg gggcccaccg ggacgcggtt cacgctgcac tccgcccagg ggagctggga
     3361 cgtgcagagc cccctgctgg gccgcttcaa cgtctacaac ctggtggcgg ccctggcggc
     3421 ctgcgccgag gccggcttcg acctggaccg cctggtgccg gcggcgcgga aggtcaccgg
     3481 cgccccgggc cgcctggagc gcgtggactg cggccagccc ttcggcgtga tggtggacta
     3541 tgcccacacg ccggacgccc tggagaagct gctggccgaa ggccgccgcc tgctcccgcc
     3601 cggcggccgc ctgcacgtgc tcttcggctg cgggggcgac cgcgaccgcg ccaagcgccc
     3661 cctcatggcc gccgccgtgg ccgccggggc ggacgtgctc tggcacacca gcgacaaccc
     3721 gcgcacggag gatcccgagc gcatcctgga cgacgccgcc ccggggattc cggaagccct
     3781 ccgcgccgac gcggcccgct accaccggaa cgccgatcgc cggggatccg tgcgccaggc
     3841 cctggcggac tgccgccccg gcgacctgct gctgctggcg gggaagggcc atgagcccta
     3901 ccaggagatc cacggcgtga agcatcccta cagcgaccgc gccgctgtgg aggccgccct
     3961 ggcccatcca ttccgggtgg ggccatgact gtcgccgcct caggaaaagc aggaacgcag
     4021 aggccacaga gggccacaga agacgcagag aaaagccctg aaatggatcc acagcaggtt
     4081 cttggaatcg ctcaagcgtc atcatcgctt ttctctgtgt gctctgcgat tctctgcgtc
     4141 ctctgtgttc cgctttttag gggtccccag tgacgcgcct ccgccatgtc gcgggaccgg
     4201 aggatccggc catcctcgag gcggcggcca tcctcgccct ggggggcctg gtggcctttc
     4261 ccacggagac cgtgtacggg ctgggcgcgg acggcctcaa tccggaggcc gtggcgcgga
     4321 tctatgccgc caagggacgc cccgccacca accccgtgat cctgcatgtg gccgatgcct
     4381 ccgccgcccg ggcgctcgta tcccactggc ctgcggaagc ccaggccctg gcggagcgct
     4441 tctggcccgg gcccctgacc ctggtgctgc cggcttcgat ggcggtgcct tccatcgtgc
     4501 gggcgggcgg cccctccgtg gccctgcgct gcccggccca ccccgtggcc ctggccctga
     4561 tccgcgccgc ggggcggccc ctggccgcgc ccagtgcc
//
LOCUS       DASUDT010000371         2199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1342750, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000371 DASUDT010000000
VERSION     DASUDT010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1342750"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VFV26_07620"
     CDS             complement(<1..246)
                     /locus_tag="VFV26_07620"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4846074.1"
                     /translation="MAGAGERDYVLGTHREEIERLGLQHRVWRPHMLECWRRAGITVG
                     SKVLDIGAGPGYATLDLAEIVGPTGEVHAAERSGNFIQ"
     gene            complement(301..1221)
                     /locus_tag="VFV26_07625"
     CDS             complement(301..1221)
                     /locus_tag="VFV26_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846075.1"
                     /translation="MDLHLLPLDSRQGYLLSRLDGSLDIPTLAAFMDLGVDEVRTMLE
                     ALVALGAVVPEDPPAAPPDAASEDEAAEESLPQAAARAATHRALFEQQLHGQPVDARV
                     AQAQVATEPELSAFCFDPTAEVIRAVLDNPRVGAVHARLIAAHHRTSAGLEALGGRTA
                     FVHDGGVRRALLQNPLLPVGLYRRLWSSKRLLEQYLVATSRDSPEQIRAMARDLLRAS
                     FNQRAGEERAELILTTEGRCLASLVGLTIDGHTTALLCRRTYVSTLLIQNIARWSAAP
                     PQLIAHLRRQDVVKRNAALRQLLERHPNAS"
     gene            complement(1306..>2199)
                     /locus_tag="VFV26_07630"
     CDS             complement(1306..>2199)
                     /locus_tag="VFV26_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX4846076.1"
                     /translation="EEAERMKPDLLLVDSIQTLFDPDFESSAGSVSQVRGCAALLTRW
                     AKTTGTPLVLVGHVTKDGSLAGPKVLEHLVDTVLAFEGDRHHHHRLLRALKNRFGAAF
                     ELGVFAMTEKGLVPAEGNPFFLDAEPRPGCAATVVLSGTRPMVVEIQALVAAAGLGIP
                     RRTALGIDGQRLAMLCAVAERRGGVQLHDRDVYLNVAGGLEIEDPAADLAVIAALCSS
                     AGGRLLAEKCLFMGEVGLTGEVRPVAQLPLRLQEGARLGFSCAAVPRLGLEGKSPLDL
                     FPETSVERLRSKAWLKGVVEE"
BASE COUNT          306 a          762 c          813 g          318 t
ORIGIN      
        1 ctggatgaaa tttccggagc gttccgcggc atggacctcg cccgtgggcc ccacgatctc
       61 cgcgaggtcg agggtggcgt agcccgggcc ggccccgata tccaggacct tcgagcccac
      121 cgtgatcccc gcgcggcgcc agcattcgag catgtgcggc cgccagaccc ggtgctggag
      181 gcccaaccgc tcgatctcct cccggtgggt tcccaggacg taatcgcgct cacccgctcc
      241 agccactcct gcctccatgc ctgttgtgac accagtctag cgaaaaggtt cccatgccgc
      301 tcagctcgcg ttcggatgcc gctccagcag ctgccgcagg gccgcgttgc gcttcaccac
      361 gtcctggcgg cgcaggtggg cgatgagctg gggcggggcg gcgctccacc gggcgatgtt
      421 ctggatgagc agggtggaga cgtaggtgcg gcggcagagc agggcggtgg tgtggccgtc
      481 gatggtgagg cccaccaggc tggccaggca gcggccctcg gtggtgagga tgagctccgc
      541 ccgctcctcc cctgcgcgct ggttgaagct ggcccgcagg agatcccggg ccatggcgcg
      601 gatctgttcc ggcgaatccc gggaggtggc caccaggtac tgctccagaa ggcgcttgga
      661 ggaccacagc cggcggtaga ggcccacggg aagcaggggg ttctgcagga gggcccggcg
      721 cacgccgcca tcatggacga aggccgtgcg cccgcccagg gcctccaggc ccgcggaggt
      781 gcggtggtgg gccgcgatga ggcgggcgtg gaccgccccc acccggggat tgtccagcac
      841 ggcgcggatg acttccgccg tgggatcgaa acagaaggcg ctcagctcgg gctccgtggc
      901 cacctgcgcc tgggccaccc gcgcatccac gggctgcccg tgcagctgct gttcaaagag
      961 ggcgcggtgg gtggcggccc gggcggcggc ctggggcagg ctttcctccg ccgcttcatc
     1021 ctctgaggcg gcgtccggcg gcgcggcggg cggatcctcg ggcaccacgg cgcccagggc
     1081 caccagcgct tcgagcatgg tcctcacctc atccacgccg agatccatga aggcggcgag
     1141 ggtggggatg tccaggcttc cgtcgaggcg cgacagcagg tagccctggc gggaatcgag
     1201 gggcaggagg tggagatcca ttcctgcccg ggggcttggc ttccaggaca tgccctgagc
     1261 ataagcgacc tgcgcgccgc cggtcacagt gtcctccggg cggggctact cctccaccac
     1321 gcccttcagc caggccttgc tgcgcagccg ctccacgctg gtctcgggga agaggtcgag
     1381 gggactcttc ccttccaggc ccagccgggg cacggcggcg cagctgaagc ccaggcgggc
     1441 gccttcctgg aggcgcaggg gcagctgggc cacggggcgc acttcgccgg tgaggcccac
     1501 ctcgcccatg aagaggcact tctccgctag cagacggccc ccggcgctgc tgcagagggc
     1561 ggcgatgacg gcgaggtccg cggcggggtc ctcgatctcc aggcccccgg cgacgttcag
     1621 gtacacgtcc cggtcatgga gctgcacgcc gccccggcgc tcggccacgg cgcagagcat
     1681 ggccagccgc tggccatcga tgcccagggc cgtgcggcgg gggatgccca ggcccgcggc
     1741 ggccaccagc gcctggatct ccaccaccat gggccgggtg ccgctgagca ccaccgtggc
     1801 ggcacagccg ggccgcggct cggcgtccag gaagaaggga ttgccttcgg cgggcaccag
     1861 tcccttttcg gtcatggcga agacgcccag ctcgaaggcc gcgccgaagc ggttcttcag
     1921 ggcgcgcagc aggcggtggt ggtggtgccg gtcgccttcg aaggccagca cggtgtccac
     1981 caggtgctcc agcaccttgg ggcccgcgag gctgccgtcc ttggtgacgt ggcccacgag
     2041 caccaggggc gtgccggtgg tcttggccca gcgggtgagc agggcggcgc agccgcgcac
     2101 ctggctcacg ctgcccgcgc tgctttcgaa atcgggatcg aagagggtct ggatgctgtc
     2161 caccaggagc aggtccggct tcatgcgctc ggcttcctc
//
LOCUS       DASUDT010000372         3220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_216364, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000372 DASUDT010000000
VERSION     DASUDT010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216364"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VFV26_07635"
     CDS             complement(<1..408)
                     /locus_tag="VFV26_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II"
                     /protein_id="HEX4846077.1"
                     /translation="MTIRLTDLGKAVLETEYAVRGPIVARAAELEKQGREIIYCNIGN
                     PQSLGQKPLTWNRQILALCEYPALMELAPGAFPADVIETAKAILAGTRHGLGAYSESR
                     GVRYIREAVAEFILERDHMRVDPDAIFLTDGASK"
     gene            576..1721
                     /locus_tag="VFV26_07640"
     CDS             576..1721
                     /locus_tag="VFV26_07640"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4846078.1"
                     /translation="MLGFSLSPEQLAEKERAHTFAEKIMRPVARKYDETGEWAVDVYK
                     AAWDQGYLQALVPEDCGGPGASQVDEAIVCEELAWGCAGLYTSIMANGLAMTPVLVAG
                     SPEQKKKWLGMLAEEPKFAAFSLSEPNAGSDAGGMSCRAEKKGDKYIINGTKCYCTNG
                     GYADWYALFASTDPSKGARGTSCIIVPRDTPGLVVGKAMDKMGQRASNQVELYFNDAE
                     VPAENILGKEGMGFVIAMKTLDQTRAAVAAGGVGVARAAFEIALEYAKTRIQFGQPIF
                     ANQAISFMLADMAKKIEASRLLTWQAAWMTDNGIKNSKQSAIAKTFATDTAMEVSTDA
                     VQILGGNGYSRDYLVEKCMRDAKLLQIYEGTNQIQRLVIAKEIQQGN"
     gene            1923..2246
                     /locus_tag="VFV26_07645"
     CDS             1923..2246
                     /locus_tag="VFV26_07645"
                     /inference="COORDINATES: protein motif:HMM:NF013089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEX4846079.1"
                     /translation="MRSWTLLLIAGLLETAWAIGLKYTHGFTRPLASVLTGLAIAGSM
                     ILLGLAAKELPIGTAYAVWVGIGAFGAAVLGMVLFKEPVTAGRIFFLILLLVAVMGLK
                     ATAPA"
     gene            2274..>3220
                     /locus_tag="VFV26_07650"
     CDS             2274..>3220
                     /locus_tag="VFV26_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846080.1"
                     /translation="MPTVRLRPFLGLILALLVILLLSLEGFRRDPGFGWILAATAMAG
                     SWLGWALRQAWIYPAKLARAEAMWGAGEPASAVAECLSRAPLATGELGYRIHLLRSAA
                     HHALGYRDRAWLDALEAQLSRLPLWKRLAVSQAFRRVPGTPSARRLAWGDRLIRLAPR
                     MARLRHLQGILLLRSGLEDALPRAWSHFEAALPLAWDDVLVLEDLMLAGLQHERGDVA
                     ERALAVLTARHGDPRLPWDRGAAGMHLLRKGRHAEALALVQGLPPERRDHPLLWLSES
                     VSRRRLGDLEGAWQVVESAVAHLPEAFRLWMERYQIALER"
BASE COUNT          505 a         1138 c         1069 g          508 t
ORIGIN      
        1 cttgctggcg ccgtccgtga ggaagatggc atcgggatcg acgcgcatgt ggtcgcgttc
       61 gaggatgaat tccgccaccg cctcgcggat gtagcgcacg ccccggcttt cgctgtaggc
      121 ccccagcccg tgcctcgtcc cggcgaggat ggccttggcg gtctcgatca catccgccgg
      181 gaaggcgccc ggggccaatt ccatgagcgc cggatattcg cagagggcca ggatctggcg
      241 gttccaggtg aggggcttct ggcccagaga ctgggggttg ccgatgttgc agtagatgat
      301 ctcccggccc tgcttctcca gctccgccgc ccgcgccacg atgggccccc gcacggcgta
      361 ttcggtctcg aggacggctt tcccaaggtc ggtcagtcgg atggtcatga acgctccagc
      421 cccccagtgt acctccgcat ccccctgtga ccggcgtcat cctactccgc gtcagagcct
      481 cggcccttgg gcgggagggg gcgggcagat agactggagg ttccagattc ttccaaccag
      541 ccacctacct accttccttt cctgaagagg cttccatgct cggtttctcc ctctcccctg
      601 aacagctggc cgaaaaagaa cgggcccaca ccttcgccga gaagatcatg cggcccgtgg
      661 cccgcaagta cgacgagacc ggcgagtggg ccgtggatgt ctacaaggcc gcctgggacc
      721 agggctacct gcaggccctg gtgcccgagg actgcggcgg ccccggcgcc agccaggtgg
      781 atgaggccat cgtctgcgaa gagctggcct ggggctgcgc gggcctctac acctccatca
      841 tggccaacgg cctggccatg accccggtgc tggtcgccgg cagccccgag cagaagaaga
      901 agtggctggg catgctcgcg gaggagccca agttcgccgc cttctccctg tccgagccca
      961 atgccggttc tgatgcgggc ggcatgagct gccgcgccga gaagaagggc gacaagtaca
     1021 tcatcaacgg caccaagtgc tactgcacca acggcggcta cgccgactgg tacgccctct
     1081 tcgccagcac cgatcccagc aagggcgccc gcggcaccag ctgcatcatc gtgccccgcg
     1141 acacgccggg cctggtggtg ggcaaggcca tggacaagat gggccagcgc gccagcaacc
     1201 aggtggagct ctacttcaac gacgccgaag tgcccgcgga gaacatcctc ggcaaggagg
     1261 gcatgggctt cgtcatcgcc atgaagaccc tcgaccagac ccgcgccgcc gtggccgccg
     1321 ggggcgtggg cgtggcccgc gccgccttcg agatcgcgct ggaatacgcc aagacccgca
     1381 tccagttcgg ccagcccatc ttcgccaacc aggccatcag cttcatgctg gcggacatgg
     1441 ccaagaagat cgaggccagc cgcctgctca cctggcaggc cgcctggatg accgacaacg
     1501 gcatcaagaa ctccaagcag agcgccatcg ccaagacctt cgccacggac accgccatgg
     1561 aggtcagcac cgacgccgtc cagattctcg gcggcaacgg ctacagccgc gactacctgg
     1621 tggagaagtg catgcgcgac gccaagctcc tgcagatcta cgagggaacg aaccagatcc
     1681 agcggctcgt tatcgccaag gagatccagc aggggaactg accgggagag atcgggccac
     1741 caagcgggtc acgagcgaac gcgcctgaat ggcgcgttcc gagtggggca cccgctggtt
     1801 cgttcaaaca accaggtcgg cctcattccc tgtcagaaat ccagcagggg aactgatcgg
     1861 aagagaacac cctatgctca gaaggcggcc ctccggccgc cttctgagtt ccgggagccc
     1921 ccatgcgcag ctggaccctc ctcctgatcg ccggcctcct ggagacggcc tgggccatcg
     1981 gcttgaaata cactcacggc ttcacccggc ccctggcgtc agtcctcacg gggctcgcca
     2041 tcgcggggag catgatcctg ctgggcctgg ccgccaagga gctgcccatc ggcaccgcct
     2101 acgccgtctg ggtgggcatc ggcgccttcg gcgcggcggt gctgggaatg gtcctgttca
     2161 aggagccggt gacggcgggc cggatcttct tcctgattct gctgctggtg gcagtgatgg
     2221 gcctgaaggc caccgccccg gcctgatcgg gtcacaatag gggcccgatg ccgatgccca
     2281 ctgtccgcct gcgccccttc ctgggcctga tcctggccct cctggtgatc ctcctgctgt
     2341 cgctggaagg attccggcga gaccccggat tcggctggat cctcgccgcc accgccatgg
     2401 ccgggagctg gctggggtgg gcgctccggc aggcctggat ctatcccgcg aagctggccc
     2461 gggccgaggc catgtggggc gccggggaac ccgcctcggc cgtggcggaa tgcctctccc
     2521 gggcccccct ggccaccggg gaactggggt accgcatcca tctgctgcgc agcgccgcgc
     2581 accatgccct gggctaccgg gaccgggcct ggctggatgc cctggaggcc cagctgtcac
     2641 gcctccccct ctggaagcgc ctggcggtgt cccaggcctt ccgccgcgtg cccggaactc
     2701 cctcggcccg gcgcctggcc tggggggacc ggctcatccg cctggctcca cgcatggcgc
     2761 ggctgcggca cctgcagggc atcctcctcc tgcgttccgg ccttgaggac gcgctgcccc
     2821 gggcctggag ccacttcgag gcggccctgc ccctggcctg ggacgacgtg ctggttctcg
     2881 aggacctgat gctggcgggc ctccagcacg aacgggggga tgtggcggag cgcgccctcg
     2941 cagtgctgac ggcccgccat ggcgatcccc gcctcccttg ggaccggggt gccgcgggca
     3001 tgcacctgct gcggaagggg cgccacgccg aagctctggc cctggtccag ggcctccccc
     3061 ccgaacgccg cgatcatccc ctgctctggc tttcggagag cgtgtcgcgg cggcgcctgg
     3121 gggatctgga gggcgcctgg caggtggtgg agtccgccgt ggcccacctg ccagaggcct
     3181 tccgcctgtg gatggagcgc taccagatcg ccctggagcg
//
LOCUS       DASUDT010000373         2263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2005823, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000373 DASUDT010000000
VERSION     DASUDT010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2005823"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..492
                     /locus_tag="VFV26_07655"
     CDS             202..492
                     /locus_tag="VFV26_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846081.1"
                     /translation="MSTLVSITVVVDDGAGNRTFQVDTTKDCVLVWGDAGWDVLADYY
                     EKAKHNPAKAKEVRDRKCPKAKPKQGETSAVPATGDPVIALKDEFCEPTQWP"
     gene            complement(496..>2263)
                     /locus_tag="VFV26_07660"
     CDS             complement(496..>2263)
                     /locus_tag="VFV26_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846082.1"
                     /translation="RALAASYQRTLDLARALPSKELQEARERELARDLRDPALARLKE
                     GASAALEAPAYHEALIAFMGGQWEMAQAKAREGLAATPWLFEAKRLEAEALLARARAL
                     QDPKAALPLLEQAEAAFIEARHLGPSDPATALGLVQVLSERASLELASGGRAEGVLAR
                     CRQAVAVVRTLRPDEGRAPAHLARALVHWADLHPPLEADAAEAYLEASRLSAEALALG
                     PEDPAIQAIRIPILMVVATKYLRPRGLEPLSAYSEAQALAREAQRRHPQEPLFTAILA
                     SACMRRMTWEINAGIPPWATFEEGLTQGLALRDRFPDFIGGFQSLATLWVERAEYERL
                     HGLDPRPSVAAALEAAAGARARGLRPRNPGWTEGDAHLIQGQYLLATQGSGEGDFLQA
                     CEGYQRALQANPNLLQAHNSLAEATLGRAQERLERGVDPDALIQEAEAHLTALGRRSP
                     TPGQTNHLRGMAALLRGRQRLAEGADPGPDWRQAMAAFRRAAQTAGHAKAQTGEAEVW
                     ARSYRHRGHPRDRAQALAAARKALERDPQRAEAWLWIAVVEQEAVRRGHSEAKGPARE
                     AWARALAIDANLRRTALSLGSP"
BASE COUNT          313 a          735 c          879 g          336 t
ORIGIN      
        1 gaggggaggc caggagaacc gggctttcag ccggggtggc ggaagcctgc atcctggcct
       61 tccacaaggc tcacggcgag ggggggcgcc gggcccctga ttgaagcgag gccgcgggcc
      121 aggaatgttg ccgcacccac ctccgcccgc ttcggctagg ctggtggcac gaaccccaac
      181 ccatgtcttt caggagctgc catgagcacc cttgtgtcca tcactgtggt cgtcgatgac
      241 ggggcgggga accgcacgtt ccaggtggat acgacgaagg actgcgtcct ggtctggggt
      301 gatgcgggct gggacgtgct ggcggactac tacgagaagg cgaagcacaa tccggccaag
      361 gccaaggaag tgcgggaccg gaagtgccca aaggccaagc ccaagcaggg cgagacttcg
      421 gctgtgcctg ccacggggga tcctgtcatc gcgctgaagg atgagttctg cgaaccgact
      481 caatggccct gagcatcagg gcgaccccag gctgagggcc gtccggcgca ggttggcatc
      541 gatggcaagg gccctggccc aggcttcccg ggccgggccc ttggcttcgg aatggccgcg
      601 gcggaccgcc tcctgttcca ccaccgcgat ccagagccag gcctctgccc tctggggatc
      661 tctttcgagg gctttcctgg ccgcagccag ggcctgggca cggtcccggg ggtggccccg
      721 gtgccggtag gagcgggccc agacctccgc ttccccggtc tgggccttgg catggccggc
      781 tgtttgcgct gcccggcgga aagcggccat tgcctggcgc caatcgggac cgggatcggc
      841 tccttcggcg aggcgctggc gcccccgcag cagggcggcc atgccccgga gatggttcgt
      901 ctgccctggg gtcggagacc gcctccccaa cgcggtcagg tgagcctcag cctcctggat
      961 gagggcatcg ggatccaccc ctcgttccag gcgttcctgg gcccgtccca gggtcgcctc
     1021 ggcaagggaa ttgtgggcct ggagcaggtt gggattggcc tggagggccc gttggtagcc
     1081 ttcgcaggcc tgcaggaaat cgccttcgcc gcttccctgg gtggcgagga ggtactggcc
     1141 ctggatgagg tgggcatccc cctcggtcca tccgggattc cgcggccgga gcccccgggc
     1201 ccgggccccg gcggcggcct ccagggcggc ggccacggag gggcggggat ccagaccgtg
     1261 gagccgctcg tactcggccc gctccaccca gagggtggcg agggactgga agcctccgat
     1321 gaagtcgggg aagcggtccc ggagggccag accctgggtg aggccctctt cgaaggtggc
     1381 ccaaggagga atgcccgcat tgatctccca ggtcatgcgc cgcatgcagg cgctggccag
     1441 gatggcggtg aagaggggct cctggggatg ccgccgctgg gcctcccggg ccagggcctg
     1501 ggcctcgctg taggcggaga ggggttcaag gccccggggc cggaggtact tggtggccac
     1561 gaccatcagg atggggatgc ggatggcctg gatggcggga tcctcggggc ccagggccag
     1621 ggcttccgcg gatagcctgg aggcctccag gtaggcctcc gcggcgtctg cctcgagcgg
     1681 gggatgcagg tcggcccagt ggacgagcgc ccgggccagg tgtgcgggag cccggccctc
     1741 atcggggcgg agggtgcgga ccacggccac ggcttggcgg cagcgggcca ggacaccttc
     1801 ggcgcggcct ccggaagcca gttccaggct ggcgcgttcc gacaggacct ggaccagccc
     1861 cagcgccgtg gcggggtcgc tggggcccag gtggcgggct tcgatgaagg cggcctcagc
     1921 ctgttccagg aggggcaggg ccgccttggg atcctggagg gcccgggccc gggccaggag
     1981 cgcctcagct tccaggcgct tggcttcgaa gagccagggg gtggcggcca ggccctcccg
     2041 ggccttggcc tgggccatct cccattggcc gcccatgaag gcgatgaggg cctcgtggta
     2101 ggcgggggcc tccagggccg ccgaggcgcc ttccttcagc cgggccaggg ccgggtcgcg
     2161 caggtcccgg gccagttcgc gctcccgggc ctcttgcagt tctttggaag gcagggctcg
     2221 ggcaaggtcc agggtccgct ggtagctggc ggccagggca cgg
//
LOCUS       DASUDT010000374         4388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_724549, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000374 DASUDT010000000
VERSION     DASUDT010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4388
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724549"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VFV26_07665"
     CDS             <1..283
                     /locus_tag="VFV26_07665"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEX4846083.1"
                     /translation="APDALYRMAGNGVLITEIMGLHTVDPVSGDLSVGASGIRIRDGV
                     LAEPVDKLTFAGNLRDFLTRIAALGDDLRWYGSSAGLSILLDDIALGGA"
     gene            330..2030
                     /locus_tag="VFV26_07670"
     CDS             330..2030
                     /locus_tag="VFV26_07670"
                     /EC_number="5.4.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEX4846084.1"
                     /translation="MSLSAARHYLSFSHLEPELRAELEPMLKAAEAGDAKAAAELEDR
                     FSEPLAFGTGGLRGFMAAGLRRMNRPNVRRTTLALAAVAQRRAPGKAIAVVGYDTRIN
                     SDVFAAESASVLAAAGYQVFIGTRPLPTPFLCFAMRQLGAACGVIITASHNPKEYNGF
                     KAYNDLGGQVVEPWDAEIETAMAALPMVPEPPIVPPGRIAPIPVAVENAYLAMGQGLL
                     QLPEAFEPAQILYTPFHGTGIAFVPALFELAAIPLIISASQGLQDGTFPTAPRPNPEE
                     LAAYAAPLKEAEALGAELILANDPDADRIGVVAKRNGAWELMSGNDLAALTLDYLCTQ
                     RGRVGAVVSTVVTSDFMAEVARHHGLPVVWTLTGFKNIAVCMDRLEALGEPYAFGAEE
                     SYGMLLPPDLRDKDGVTAALVVAEMAGHYKAKGLTLFEAVDALMAKVGTFHNRLVNLE
                     DPRPGGAKRFAEAMGRIRSAGLASLGGEPVASWEDYQTGLWHNEGRSEPILDRPDQRD
                     QALPIPRSNVLKFRLESGGFAAFRPSGTEPKLKVYLQSRGSEAQLDLMEDEARTLLGL
                     "
     gene            complement(2089..2319)
                     /locus_tag="VFV26_07675"
     CDS             complement(2089..2319)
                     /locus_tag="VFV26_07675"
                     /inference="COORDINATES: protein motif:HMM:NF025875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4846085.1"
                     /translation="MRRIALLTAALMLAVAPAAMAKMTTVKGAKCTACHEGTPKDKKF
                     NAAAAKMVAKYKEAECKDCHGFADGKLTTTKK"
     gene            complement(2610..>4388)
                     /locus_tag="VFV26_07680"
     CDS             complement(2610..>4388)
                     /locus_tag="VFV26_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846086.1"
                     /translation="GSSAAAGCADCHGNHDIARVSQKDSPVYKMNLPTTCAKCHANKS
                     ITDEYKMKFPGVSAQYTESIHGKALLEKGLIVAPSCNDCHGVHDIKRSVDRSSPINHA
                     NVAKTCGKCHTTVEDIYSKSIHGQLLAKGDPRGPVCIQCHSAHQIETPASGHFKAGSD
                     LVCGKCHADRLEHYRDTYHGKAMAFGKANNASSVAACYDCHGHHDVLRASDPNSRLSP
                     VNIVNTCKQCHANATVSFTKYAPHANPMDRKNYPILNYVFLVMTTLLVFTFTLFGAHT
                     ILWLFRSLWLYRHDSKKFREAKAHIEKDDEQFTRFQPFERFLHILVVTSFLLLVITGM
                     PLKFYYSDWAKFIFNVMGGAEVARTLHHFGAVITFFYFVLHLSSTAGNLWKHRGFLRN
                     PETGKYEFSRLGKAVAHPDSMIPTKQDLTDFIAHNKWFFGKGPKPQFDRWTYWEKFDY
                     LAVFWGIFAIGVSGLIMWFPEFFSRFMPGWVINVSLIVHSDEALLAAGFIFTVHFFNT
                     HFRLEKFPMDTVIFSGRISKAEMLHERKRWYDRLLENGKLDAHRVKDEWEAWKGIARS
                     AGYGFFGLGLILLILILYAMTARLTH"
BASE COUNT          717 a         1418 c         1489 g          764 t
ORIGIN      
        1 ggcgcccgac gccctctacc gcatggccgg gaatggcgtg ctcatcaccg agatcatggg
       61 cctccacacg gtggatcccg tcagcggcga cctcagcgtg ggcgccagcg gcatccgcat
      121 ccgcgatggc gtcctggccg agcccgtgga caagctcacc ttcgccggca acctgcggga
      181 cttcctcacc cgcatcgccg ccctgggtga cgatctccgc tggtacggca gcagtgccgg
      241 gctgagcatc ctgctcgatg acatcgccct gggcggcgcg tgatccgctc ccggcgccca
      301 tcacgtagca tggatgcagc gaggtcccca tgtccctgag tgccgcacga cattaccttt
      361 ccttctccca cctggagcct gagctccgcg cggagctcga gcccatgctc aaggccgccg
      421 aggccggtga tgcgaaggcc gcggcagaac tggaggaccg cttttccgag cccctggcct
      481 tcgggaccgg cggcctccgg ggcttcatgg ccgcgggcct gcgccgcatg aaccggccca
      541 atgtgcgccg caccaccctg gccctggccg ccgtggccca gcgccgggcg ccgggaaagg
      601 ccatcgccgt ggtgggctac gacacgcgga tcaattccga tgtcttcgcc gctgaaagcg
      661 cctcggtgct ggccgccgcg ggctaccagg tcttcatcgg cacccggccc ctgcccacgc
      721 ccttcctgtg cttcgccatg cgccagctgg gcgcggcctg cggcgtgatc atcaccgcca
      781 gccacaatcc caaggagtac aacggcttca aggcctacaa cgacctgggc ggccaggtgg
      841 tggagccctg ggatgcggag atcgagaccg ccatggccgc cctgcccatg gtgcccgaac
      901 cgcccatcgt ccccccgggc cgcatcgccc cgatccccgt ggcggtggag aacgcctacc
      961 tcgccatggg ccagggcctg ctccaactgc cggaggcctt cgagcccgcg cagatcctct
     1021 acaccccctt ccacggcacg ggcatcgcct tcgtgcccgc cctcttcgag ctggccgcca
     1081 tccccctcat catcagcgcc agccagggcc ttcaggacgg caccttcccc acggccccgc
     1141 gccccaaccc cgaggagctg gccgcctatg ccgcgcccct caaggaggcc gaggccctgg
     1201 gcgcagagct catcctcgcc aacgatcccg atgcagatcg catcggcgtg gtggcgaaac
     1261 ggaacggcgc ctgggaactc atgtccggca acgacctggc ggccctcacc ctcgactacc
     1321 tctgcaccca gcggggccgc gtgggcgccg tggtcagcac cgtcgtcacc tccgacttca
     1381 tggccgaagt ggcccggcac cacggcctgc cggtggtctg gacccttacc ggcttcaaga
     1441 acatcgcggt gtgcatggac cgcctggaag cccttggcga gccctacgcc ttcggggccg
     1501 aggaaagcta cggcatgctg ctgccgccgg acctgcggga caaggatggc gtcaccgcgg
     1561 ccctggtggt cgccgagatg gccggacatt acaaggcgaa gggcctcacc ctcttcgagg
     1621 ccgtcgacgc gctcatggcc aaggtcggca ccttccacaa ccgcctggtg aacctggagg
     1681 atccgcgacc cggcggcgcc aagcgcttcg ccgaggccat gggccgcatc cgctcggcgg
     1741 ggctggcctc cctgggcggc gagccggtgg ccagttggga ggactaccag acgggcctct
     1801 ggcacaacga aggccgcagc gaacccatcc tggaccggcc ggaccagcgg gaccaggccc
     1861 tgcccatccc ccgcagcaac gtgctgaagt tccgcctgga aagcggcggc ttcgccgcct
     1921 tccgccccag cggcaccgag cccaagctca aggtctacct ccagagccgc ggcagcgaag
     1981 cccagctgga tctcatggag gacgaggccc gtacactcct gggcctatag gcgaccccac
     2041 aaaaaagcgg cgccggaatc ggcgccgctt ttttgtgggg tgagaaagtt acttcttcgt
     2101 ggtggtcagc ttgccgtccg cgaagccgtg gcaatccttg cactcggctt ccttgtactt
     2161 cgcgaccatc ttggcggcgg cggcgttgaa cttcttgtcc ttgggggtgc cctcgtggca
     2221 ggcggtgcac ttggcaccct tcacggtggt catcttggcc atggcggcgg gggccacggc
     2281 aagcatgagg gcggcggtga ggagcgcgat gcggcgcatg gtgagtcctt ttgaaagagg
     2341 gccctcaggg gtggtgggga gggcaggttt gagtagaaat aatcgggcca gtgataggtg
     2401 gtcctgcggg gcattcgagg ggggcatgtc agttactcga ttcggggccc gtgggaacca
     2461 tgtcacagaa ttgtagttga cccacccttg gcacttccgt gattcagatc acaccagcgg
     2521 aagttccgcg ccattcatct ttctgttccg gcttgggaaa ccgcgcagcc cttcccgatg
     2581 gaggggctgc gcggcttcgg gttcggcggt cagtgcgtca ggcgggccgt catcgcgtag
     2641 aggatgagga tcaggaggat caggccgagg ccgaagaagc cgtagccggc gctgcgggcg
     2701 atgcccttcc aggcctccca ctcatccttc acgcggtggg cgtccagctt gccgttctcc
     2761 aggaggcggt cataccaccg cttccgctcg tggagcattt cggccttgga gatgcggccc
     2821 gagaagatga ccgtatccat ggggaacttc tccagccgga agtgcgtgtt gaagaagtgg
     2881 accgtgaaga tgaagccggc agccaacagg gcctcgtcgg agtggacgat caacgaaacg
     2941 ttgatgaccc agccaggcat gaagcggctg aagaactcgg ggaaccacat gatcaggccc
     3001 gagacgccga tggcgaagat gccccagaac acggccaggt agtcgaactt ctcccagtag
     3061 gtccagcggt cgaactgggg cttggggccc ttgccgaaga accacttgtt gtgggcgatg
     3121 aagtccgtga ggtcctgctt ggtggggatc atggagtcgg ggtgggcgac cgccttcccg
     3181 aggcgggaga actcgtactt cccggtctcc gggttgcgga ggaaaccgcg gtgcttccag
     3241 aggttgccgg ccgtgctgct caggtgcagc acgaagtaga agaaggtgat gaccgcgccg
     3301 aagtggtgca gggtccgggc cacctcggcc ccgcccatca cattgaagat gaacttggcc
     3361 caatcggagt agtagaactt cagcggcatg ccggtgatca ccagcaggag gaagctcgtc
     3421 accaccagga tgtggaggaa ccgctcgaag ggctggaacc gggtgaactg ctcgtcgtcc
     3481 ttctcgatgt gggccttcgc ctcgcggaac ttcttcgagt cgtggcggta gagccagagg
     3541 gaccggaaca gccacaggat ggtgtgggcg ccgaacaggg tgaaggtgaa caccagcagg
     3601 gtggtcatca ccaggaacac gtagttcagg atcgggtagt tcttgcgatc catgggattg
     3661 gcatggggcg cgtacttggt gaagctgacg gtggcgttgg catggcactg cttgcaggtg
     3721 ttgacgatgt tcacagggga caggcgggag ttggggtccg aggcccgcag cacgtcatgg
     3781 tggccgtggc agtcatagca ggcggcgacg gaactggcgt tgttggcctt gccgaaggcc
     3841 atggccttgc cgtggtaggt gtccctgtag tgttcgaggc ggtcggcgtg acacttgccg
     3901 cagacgaggt cgctgccggc cttgaagtgc ccgctggccg gggtctcgat ctggtgggcc
     3961 gagtggcact ggatgcacac ggggccccgc gggtcaccct tggccaggag ctggccgtgg
     4021 atgctcttgc tgtagatgtc ctccaccgtg gtgtggcact tgccgcaggt cttggccacg
     4081 ttggcgtggt tgatgggcga gctgcggtcc acgctccgct tgatgtcgtg gacgccgtgg
     4141 cagtcattgc agctgggggc cacgatgagg cccttctcca gcagcgcctt gccgtggatg
     4201 ctctcggtgt actgggcgct cacgccgggg aacttcatct tgtattcgtc ggtgatgctc
     4261 ttgttggcgt ggcacttggc gcaagtcgtg gggaggttca tcttgtagac tggcgaatcc
     4321 ttctggctga cacgggcgat gtcgtggttc ccgtggcagt ccgcgcagcc ggcggcggcc
     4381 gaggaccc
//
LOCUS       DASUDT010000375         2651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1829442, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000375 DASUDT010000000
VERSION     DASUDT010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829442"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /gene="bamD"
                     /locus_tag="VFV26_07685"
     CDS             complement(<1..465)
                     /gene="bamD"
                     /locus_tag="VFV26_07685"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX4846087.1"
                     /translation="MSFAPPRFRTPAVLFCLAPALVQGAIQAPAQDGELAERLFRSGE
                     RAYAAKSYKEALDTWNQLLQSVPRSEFAPRALLALARHQVEVERRPEAAMPFLDRIKA
                     EHMRTPEAADGLLLRGSLLARQARRAADLKDAMAEFNRVLDLFPDSPAVPGAR"
     gene            complement(509..>2651)
                     /locus_tag="VFV26_07690"
     CDS             complement(509..>2651)
                     /locus_tag="VFV26_07690"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX4846088.1"
                     /translation="ALWEALGGADPLAFRLLLRAVAELPGEPPNSALIDLFRETVRTL
                     EDLEALESLTHRLQTGARNAAKAELAQAAMARMEARAPEAVRALRAALEAGEAGQPLT
                     PLEPMRSLARGPYEHFLTEALVVLLEGKVARFNAMVTEAQDTAAKQQVAQGAALHQIC
                     EALVRRVVAGHLAASAVLPVFREALLHFTHSEGLDYAFCRLVPASDEAGLACVLAMTD
                     PKRREGCLDTLGAREEDALVPFFLKAMEDSIVEVGCRAMHHFGKLPSSFPAVMALFQS
                     GQPEQVRTALQIFTENGTKAAAEPLMAYLKTDVRDDLLLEAVEALGAIRSPAAAPVLL
                     DLLHDGKPARLQEALVEALAGLATPEAGLGLLAKSAHLKLSQVLIVALEGTLAAFPGF
                     ERALPQESLPALEQLIIRCCDDREGEGQRLRAILAAQHLYCFDQELFARLKDMFSDFL
                     FELRTRGDWDRDTNDRVAAVVKELGRRSASLGHIAGKEEKIRALLKAVPPEGPGRAPA
                     LLAVREALQDPEFIMRIELAQETATLVLAEFDRKDQDWRELARLCEIAGLTRQTALVE
                     PLKEQYNRATGLGLRSAAKEALLALGLDEQEIGRRAPIHTILLLEPSAFFRKRLLAAL
                     GSAWDVREAGSRAEAASLLAERPVDLLISEAADAIGDLHPWLKLQCETRRCRHVLFST
                     AVRDGTGDEPWILGTLYKPYPPEQLLKALEP"
BASE COUNT          382 a          869 c         1013 g          387 t
ORIGIN      
        1 ccgcgccccg ggcacggcgg gggaatcggg gaacaggtcg aggacccggt tgaattcggc
       61 catggcgtcc ttgaggtccg cggcgcggcg ggcctggcgc gccagcaggc tgccccgcag
      121 cagcagcccg tcggcggctt cgggggtgcg catgtgttcg gccttgatcc ggtccaggaa
      181 aggcatggcc gcctcgggcc tgcgttccac ctccacctgg tgacgggcca gggccagcag
      241 ggcccgcggc gcgaattcgc tcctggggac ggactggagc agctggttcc aggtatccag
      301 ggcctccttg taggacttgg ctgcataggc ccgctccccg ctccggaaca gccgttccgc
      361 cagttcgcca tcctgggccg gggcctggat ggcgccctgg accagggccg gcgcgaggca
      421 gaacaggacg gccggggtgc ggaacctggg gggtgcgaac gacatggaag cctcggggca
      481 gagggaaagc atagccgctg gtccggattc agggttccag ggccttcaga agctgctccg
      541 gcggataggg cttgtagagg gtgcccagga tccagggttc gtccccagtc ccatcccgga
      601 ccgcggtgga gaacaggaca tggcggcagc gccgggtctc gcattgcagc ttcagccagg
      661 ggtgcagatc cccgatggca tcggcggcct cggagatgag caggtccacc gggcgttccg
      721 ccaggaggga ggccgcttcc gcgcggctgc cggcctcccg cacatcccag gcgctgccca
      781 gggccgccag caggcgcttg cggaagaacg cgctgggttc cagcagaaga atggtgtgga
      841 tgggggcccg gcggccgatc tcctgttcgt cgagtcccag ggccaggagc gcctccttgg
      901 cggcgctgcg caggcccagg cctgtggcgc ggttgtactg ttccttcagg ggttccacca
      961 gggcggtctg gcgggtcagc cccgcgattt cgcagagccg ggcgagttcg cgccagtcct
     1021 ggtccttgcg gtcgaattcg gccagcacga gggtggccgt ctcctgggcc agttcgatcc
     1081 gcatgatgaa ctccggatcc tgcagggctt cccgcacagc caggagcgcc ggggcgcgac
     1141 cggggccctc cgggggcacc gccttcagga gggcgcggat cttctcctcc ttgcctgcga
     1201 tatggcccag gctggcgctg cggcggccca gctccttcac cacggcggcc acgcggtcgt
     1261 tggtgtcccg gtcccagtcg ccgcgggtgc gcagctcgaa aaggaaatcc gagaacatgt
     1321 ccttgagccg cgcgaaaagc tcctgatcga agcagtacag gtgctgggcg gcgaggatgg
     1381 cccgcaggcg ctggccctcg ccttcgcggt cgtcgcagca gcggatgatg agctgttcga
     1441 gggcgggaag ggattcctgg gggagggccc gctcgaagcc ggggaaggcc gccagagtcc
     1501 cctccagggc cacgatcagc acctgggaga gcttcagatg ggcggatttc gccagcaggc
     1561 cgagccccgc ttcgggcgtg gccagcccgg ccagagcctc caccagggcc tcctggagac
     1621 gggcgggttt cccgtcgtgg agcaggtcca ggagcaccgg ggcggcggcc gggctgcgga
     1681 tggcgccgag agcctccacc gcctccagca ggaggtcgtc gcgcacatcg gtcttgagat
     1741 acgccatcag gggttcggcg gcggccttgg tgccgttctc ggtgaagatc tggagcgccg
     1801 tccgcacctg ttcgggctgg ccggactgga agagcgccat cacggccggg aagctggagg
     1861 gcagcttgcc gaaatggtgc atggcccggc agcccacttc gacgatggaa tcctccatgg
     1921 ccttcaggaa gaagggcacc agggcatcct cctcgcgggc ccccagggtg tccaggcagc
     1981 cttcccggcg cttggggtcg gtcatggcga ggacgcaggc gagcccggcc tcgtcgctgg
     2041 cgggcaccag gcggcagaag gcgtagtcca ggccctcgct gtgcgtgaaa tggaggaggg
     2101 cctcccggaa gaccggcagg acggcggaag cggccaggtg gcccgcgacc acgcggcgga
     2161 cgagggcttc acagatctga tggagggcgg cgccctgggc cacctgctgt ttggcggccg
     2221 tgtcctgggc ttccgtgacc atggcgttga agcgggcgac cttgccttcc agcaggacca
     2281 ccagggcttc cgtgaggaag tgctcgtagg gcccgcgggc gaggctccgc atgggttcca
     2341 ggggggtgag cggctggccc gcctcgccgg cctccagggc cgcgcggagg gcccgcacag
     2401 cctcgggggc ccgggcctcc atgcgggcca tggccgcctg ggccagctcc gccttggcgg
     2461 cgttgcgggc gccggtctga aggcgatggg tgagggactc gagggcctcc agatcctcca
     2521 gcgtgcggac cgtctcccgg aagaggtcga tgagggcgct gttcggaggc tcgccgggca
     2581 gttcggccac ggcccggagc aggagccgga aggccagggg atcggccccc cccagagcct
     2641 cccacagggc g
//
LOCUS       DASUDT010000376         3605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1277074, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000376 DASUDT010000000
VERSION     DASUDT010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277074"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VFV26_07695"
     CDS             complement(<1..416)
                     /locus_tag="VFV26_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846089.1"
                     /translation="MWLAAAILALGVVSLGMRVAARDIVLNLLNTSVFLLASLTAMDR
                     ARREPAAGKGWRLLAVAMAAQFCAQALALAFLLRHKSPPPFPSAGELFAFLSLGLILA
                     SLLAWPLASTTGSERLRKGLDGLALGVAAFLVAWFFA"
     gene            complement(551..1678)
                     /gene="lipB"
                     /locus_tag="VFV26_07700"
     CDS             complement(551..1678)
                     /gene="lipB"
                     /locus_tag="VFV26_07700"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX4846090.1"
                     /translation="MSEAGFSTPRPAQLRRFGRVFYPAGLRLQKALAAHVAAEGNPDQ
                     LVILEHDPVFTLGRNATPADIHMSDDFLAAQGVSVHRTDRGGEVTYHGPGQIVAYPIC
                     NLRGGREDVGRLVRGLEEAMIRTAAEFGIVADRLKGAPGIWVETPRGLEKLGAIGLHL
                     SRWITTHGIAFNVRPNLDHFRWITPCGFTDKGVCSLHSLLGEGSPTWEEAADRLQAHL
                     IQCLALDLQPVRQPSRSVSAMTWRRGADGPEILMMLRVPEHGLWWQSVTGMMEPGETP
                     EQTAHRELMEETGLKGTLRPLGLSHSFWVDPAIVAFPDAEPRFNTETCFSMEVPADAQ
                     VRLEPLEHSEFRWCHPEEALAMMKWEGSKAALALLRGKFEG"
     gene            1735..3180
                     /locus_tag="VFV26_07705"
     CDS             1735..3180
                     /locus_tag="VFV26_07705"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4846091.1"
                     /translation="MSLDPSTIGRFKVLGTLGAGAMGTVYLAEDPLLKRTLAIKVVRE
                     GTGDAEVLLRFKREAEISARLNHPNAITIFDVGEAQDLGPYLVMEYVEGDSLSDLIQR
                     GPMPPDVALGLLIQAADALAAVHGLGILHRDIKPENILVAKDGRLKLMDFGIALVDQG
                     RLTATSTFLGTPAYAAPEVLNGAKATPASDRWAFTLMAFEMVTGQLPFAAESVGATLY
                     RIVHEDPVWPPDLAPDLAAVFGRALDKDPEQRFPDLASFLRALAEALPLEPGRRAAHL
                     AQMASTAPVKATSTLRLGHLPAASAGRNPWLWGGGALVVVLGLWLLALRSEPSRILSI
                     ESKPSGAEVFLDGIPLGRTPLRQVVVKGKADTVRLEKPDFLPLEHRLKTGEKDLSLRL
                     APAPFRIQVASEPPGAEIFLDGESRGRTPAAIDIPGEGGHQLRLQLEGYQPWVAVPER
                     HKALPDPIRLQKPKGKKGEGKLRKFFKGMFQ"
     gene            3203..>3605
                     /locus_tag="VFV26_07710"
     CDS             3203..>3605
                     /locus_tag="VFV26_07710"
                     /inference="COORDINATES: protein motif:HMM:NF015451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4846092.1"
                     /translation="MSNVIVVGGGAAGLVAAWRAATLGHRVVLLEANGRLGVKLRISG
                     GGKCNITHEGPPKALLAAFSKDQARFLRPSLHAFDNGAVLELLRREGVETYVRDNGRV
                     FPQDRPGSAGAVVSAFETLVRRAGVDVRTGAR"
BASE COUNT          561 a         1211 c         1296 g          537 t
ORIGIN      
        1 gcgaagaacc aggcgaccaa gaaggctgcg acgcccaggg ccaggccatc cagtcccttc
       61 cgcagacgct ccgagccggt ggtcgaagcc aggggccagg ccagcagcga ggcgaggatc
      121 aaccccaggg acaggaaggc aaacagctcg cctgccgagg ggaagggtgg gggcgacttg
      181 tgccggagca ggaaggccag ggccagggcc tgagcacaga attgcgccgc catggccacg
      241 gcgagaaggc gccagccctt gcctgcggcg ggctcccgcc gggcccggtc catggccgtg
      301 agggacgcca gaaggaagac cgaggtattc agaaggttca ggacgatgtc ccgcgccgcg
      361 acccgcatcc cgaggctgac aacgcccagg gccaggatgg ccgccgccag ccacacaaaa
      421 cttgcaggcc agcgtggcgg accggaaggc gggggagtag gagccgagtg cgtcatggcg
      481 gatgacctcc catcggtcgg ggtggggacg gacctgaatt caaccactcg gctcggcccc
      541 ctgatggggc tcagccctcg aatttacccc gcaacagggc cagcgctgcc ttggagccct
      601 cccacttcat catggccagg gcttcctcgg gatggcacca cctgaattca ctgtgctcca
      661 ggggctccag gcggacctgg gcgtctgccg gaacctccat ggagaagcag gtctccgtgt
      721 tgaaccgggg ctccgcatcg gggaaggcca cgatggcggg atccacccag aagctgtggg
      781 agaggcccag ggggcgcagg gtgcccttga ggcccgtctc ctccatgagc tcgcggtggg
      841 cggtctgctc gggtgtctcg ccgggctcca tcatgccggt gacgctctgc caccagaggc
      901 cgtgctcggg cacccgcagc atcatgagga tctcggggcc atcggcaccg cggcgccagg
      961 tcatggccga cacgctgcgg ctgggctggc ggacgggctg gagatccagg gccaggcact
     1021 ggatcaggtg ggcctggagg cggtcggcgg cctcctccca ggttggggag ccctcgccca
     1081 ggagcgagtg gaggctgcac acgcccttgt ccgtgaagcc acagggcgtg atccaccgga
     1141 agtggtcgag gttggggcgc acattgaagg cgatgccgtg ggtggtgatc cagcggctga
     1201 ggtggaggcc gatggcgccc agcttctcca gcccccgcgg ggtttccacc cagatgccgg
     1261 gagcaccctt caggcggtcg gccacgatgc cgaactccgc ggcggtgcgg atcatggcct
     1321 cttccaggcc gcgcaccagc cgacccacat cctcccgccc gccccgcagg ttgcagatgg
     1381 ggtaggccac gatctggccg gggccgtggt aggtcacttc gccgccgcgg tccgtgcggt
     1441 ggacgctcac gccctgggcc gccaggaagt cgtcgctcat gtggatgtcg gctggcgtcg
     1501 cgttgcggcc cagggtgaag acgggatcat gctccaggat caccagctga tccggattcc
     1561 cttcagcggc cacatgagcc gccagcgcct tctgcaggcg gaggcccgcc gggtagaaga
     1621 cccgaccgaa gcggcggagc tgggcggggc ggggcgtgga gaaaccggct tcggacatcc
     1681 ttcgagtgta gccgggcgcc gcccgcagcc tgcctctggc atgatcatgg gaggatgagc
     1741 ctcgatcctt ccaccatcgg ccgcttcaag gtcctcggaa ccctcggcgc cggggcgatg
     1801 gggaccgtct atctggccga ggatcccctg ctcaagcgga ccctggccat caaggtggtg
     1861 cgcgagggca ccggcgatgc ggaggtgctg ctccgcttca agcgcgaggc cgagatctcg
     1921 gcccggctga accatcccaa cgccatcacg atcttcgatg tgggcgaggc ccaggattta
     1981 gggccctacc tcgtcatgga gtatgtggag ggggattctc tgtcggactt gatccagcgg
     2041 ggccccatgc caccggacgt ggccctgggg ctgctgatcc aggccgcgga tgccctggcc
     2101 gccgtgcatg ggctggggat cctccatcgg gacatcaagc cggagaacat cctggtggcc
     2161 aaggacggcc gcctgaagct catggatttc ggcatcgccc tggtcgacca ggggcgcctg
     2221 accgcgacgt cgaccttcct cggcaccccc gcctacgccg cccccgaagt gctgaacggg
     2281 gccaaggcca cccccgcctc ggaccgctgg gccttcacgc tcatggcttt cgagatggtg
     2341 acgggccagc tgcccttcgc ggccgaaagc gtcggcgcca ccctctaccg catcgtgcat
     2401 gaggacccgg tctggccgcc ggacttggcg ccggatctgg ctgccgtttt cggcagggcc
     2461 ctggacaagg atccggaaca gcggtttccg gaccttgcct cctttcttcg ggccctggcg
     2521 gaggcgctcc ccctggaacc gggccgccgg gcggcccacc tcgcccagat ggcctccaca
     2581 gccccggtca aggccaccag cacgctgcgc ctggggcatc tgccagcggc ctctgcgggc
     2641 cggaatccct ggctgtgggg tggcggcgcc ctggtggtgg tcctgggcct ctggctcctg
     2701 gccctccggt ccgaacccag ccggatcctc tccatcgaat cgaagcccag cggcgccgag
     2761 gtgttcctgg atggaatccc cctgggccgt acgcccctgc gccaggtggt ggtgaagggc
     2821 aaggcggata ccgtgcgcct ggagaagccc gacttcctgc ccctggagca ccgcctgaag
     2881 accggggaga aggacctgtc cctgcgcctg gcgcccgcgc ccttccggat ccaggtggcc
     2941 agcgaacctc caggcgccga gatcttcctg gatggcgagt cccgggggag gacgcccgcg
     3001 gccatcgaca ttccgggtga aggcggccac cagctgcggc ttcagctgga gggctaccag
     3061 ccctgggtgg ccgtgcccga gcggcacaag gccctgcccg atcccatccg cctccagaaa
     3121 cccaagggca agaagggtga gggcaagctc cggaagttct tcaaggggat gttccagtag
     3181 cagtctccgc catgatggat ccatgtcgaa tgtgatcgtg gtgggcggag gagcggcggg
     3241 gctggtggcg gcctggcggg cggcgacgct ggggcacagg gttgttctgc tggaggccaa
     3301 tggccgtctg ggcgtgaagc tccgcatcag cggcggcggc aagtgcaaca tcacccatga
     3361 ggggcctccg aaggccctgc tggcggcctt ctccaaggac caggcgcggt tcctccggcc
     3421 ttcgctgcac gccttcgaca acggggccgt gctggagctg ctgcgccgcg agggcgtgga
     3481 gacctatgtg cgcgacaacg gccgcgtgtt tccccaggac cgcccgggca gcgcgggggc
     3541 ggtggtctcc gccttcgaga ccctggtgcg gcgggcgggg gtggacgtgc ggacgggcgc
     3601 ccgcg
//
LOCUS       DASUDT010000377         2958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1011913, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000377 DASUDT010000000
VERSION     DASUDT010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011913"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VFV26_07715"
     CDS             complement(<1..409)
                     /locus_tag="VFV26_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846093.1"
                     /translation="MHPLSQVLAWLALALPAGAALAGLALLLARWARLRRRAKADPEA
                     LLLSAVSGSLRERGELAATLGELRTVHERLVDALPTGLLWVDQRQRVAALNRPGCSLL
                     GVRPGVVGLEAAFVLEPFPWLREALARDPGPAWR"
     gene            433..1260
                     /locus_tag="VFV26_07720"
     CDS             433..1260
                     /locus_tag="VFV26_07720"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: protein motif:HMM:NF003742.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HEX4846094.1"
                     /translation="MDRQPIYVVSGGSGETAQRMVQAALTQFAKGESSALVRRFQNVR
                     SREDMDRVLQMAAEKRAVIIHTTVSREMRVYLADRCAELRLTEVDLFGNLLDTLALYL
                     RERPEERPGSFHAVGDKYFRRIEAIEFALKFDDGIDMSGLPDADIVLVGISRTSKTPL
                     SMYLAMEGYKVLNVPLVPGVQLPPELGSIPQGRIVGLTIQPDRLQEIRAYRLKRLGAA
                     GSADAYSDLGRILDELAYADEVFKQHRRWPVLDVTGRSIEETAGLVLDRVFGKERAV"
     gene            complement(1443..>2958)
                     /gene="pap"
                     /locus_tag="VFV26_07725"
     CDS             complement(1443..>2958)
                     /gene="pap"
                     /locus_tag="VFV26_07725"
                     /inference="COORDINATES: protein motif:HMM:TIGR03708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0043751 - polyphosphate:AMP
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate:AMP phosphotransferase"
                     /protein_id="HEX4846095.1"
                     /translation="AKPKRQVHRPGGTMFESAELGHRIDKGVWDREVPALREALLDAQ
                     YDLAAAKFPVVILVAGVDGAGKSETVNTLNEWMDPRHIQTHGLDEPSDEERERPHMWR
                     YWRMLPPKGKIGIFDGSWYTWPILERAHGRIKTSDLDQDMARVARFEQMLIQEGALVL
                     KFWMHLGKEQQKKRLKGLEKDPKTRWRVTPRDWKHFEMYDTFRQVAERALRSTSTAGA
                     PWIVVEATDARYQRLTVGKILLERLRARLDQPAPVTPAIPVHPPRPLLDGVNILRALD
                     LSKRVEKKEYEDELLVLQGRLNLLARHRNFRKHAVALVFEGVDAAGKGGSIRRITQAL
                     DARMYHIHPIAAPTEEERAQPYLWRFWRHLPRRGKVAIFDRSWYGRVLVERVEGFCTE
                     ADWQRAYSEINDFEDQIVRNRSILLKFWLSISQEEQLRRFEERQMTPFKRFKITEEDW
                     RNREKWPAYEAAICDMLDRTSTEIAPWTLVESEDKRYGRIKILRTLVRRLEDEL"
BASE COUNT          437 a         1055 c          991 g          475 t
ORIGIN      
        1 agcgccaggc gggtccggga tcccgggcca gggcctcccg cagccagggg aagggctcca
       61 gcacgaaggc cgcctccagg cccaccaccc cgggccgcac gcccagcagc gagcagcccg
      121 gccggttcag cgccgccacg cgctggcgct gatccaccca gagcagtccc gtgggcagcg
      181 cgtccaccag ccgctcgtgg accgtgcgca gctcgcccag ggtggcggcc agctcgcccc
      241 gctcccgcag gctgccggac acggcggaga gcagcagggc ctccgggtcc gccttggccc
      301 gccgccgcag ccgcgcccag cgcgcgagaa gcagggccag gcccgcgagc gccgccccgg
      361 cggggagggc cagtgccagc caggcgagga cttgggacag gggatgcatg gccccagggt
      421 atgctcattc ccatggacag gcagcccatc tacgtggttt ccggcggctc cggcgagacc
      481 gcccagcgca tggtgcaggc ggcgctaacc cagttcgcca agggcgaaag ctcagcgctg
      541 gtgcggcggt tccagaatgt ccgctcccgc gaggacatgg accgggtgct ccagatggcg
      601 gcggaaaaac gggccgtgat catccacacc acggtctccc gggagatgcg cgtctacctg
      661 gcggaccgct gcgccgagct ccggctcacc gaggtggatc tcttcggcaa cctcctggac
      721 accctggccc tctacctgcg ggaacggccc gaggagcgcc ccggcagctt ccacgcggtg
      781 ggcgacaagt acttccgccg catcgaggcc atcgaattcg ccctgaaatt cgacgatggc
      841 atcgacatga gcggcctccc cgacgccgac atcgtgctgg tgggcatcag ccgcaccagc
      901 aagacccccc tttccatgta tctcgccatg gagggctaca aggtgctcaa cgtgcccctg
      961 gtgccaggtg tgcagcttcc gccggagctg ggaagcatcc cccagggccg catcgtgggg
     1021 ctcaccatcc agcccgaccg gctccaggag atccgggcct accgcctcaa gcgcctgggc
     1081 gccgcgggca gtgccgacgc ctacagcgac ctgggccgca tcctcgacga attggcctac
     1141 gccgacgagg tcttcaagca gcaccgccgc tggcccgtgc tggatgtcac cggccgcagc
     1201 atcgaggaga ctgcgggcct ggtactggac cgcgtgttcg gcaaggaacg ggcggtctag
     1261 ggtcccgagg ctggaggctg gagtctggag gtactgcttt ctgggtggcc ctacgggcca
     1321 cgccaaggtt ttcctcaggg ccgctcgggt gggtcggcgc cgcactgaat catcatcgcg
     1381 ctgcgcagca gcgccacagg aatccgtacc tccagactcc agactccaga ctgatccccc
     1441 ccctacagct cgtcctccag ccgccgcacg agggtccgca ggatcttgat gcgcccgtag
     1501 cgcttgtcct cgctctccac gagggtccag ggggcgatct cggtgctggt gcggtcgagc
     1561 atgtcgcaga tggcggcctc ataggcgggc cacttctcgc ggttgcgcca gtcctcctcg
     1621 gtgatcttga agcgcttgaa gggcgtcatc tggcgctcct cgaagcggcg cagctgttcc
     1681 tcctggctga tggacagcca gaacttgagc aggatgctgc ggttgcgcac gatctggtcc
     1741 tcgaagtcgt tgatctcgct gtaggcccgc tgccagtcgg cctcggtgca gaagccctcc
     1801 acccgttcca ccagcacccg tccgtaccag ctgcggtcga agatggccac cttgccgcgc
     1861 cgcgggaggt gccgccagaa gcgccagagg tagggctggg cccgctcctc ctccgtgggc
     1921 gcggcgatgg ggtggatgtg gtacatgcgg gcgtccaggg cctgcgtgat gcggcggatg
     1981 ctgccgccct tgcccgccgc gtcgacgcct tcgaacacca gcgcgacggc gtgcttccgg
     2041 aagttccggt gccgggccag gaggttcagc ctcccctgga gcacaagcag ctcatcctcg
     2101 tactccttct tctccacccg tttcgacagg tccagggccc tgaggatgtt gacgccgtcc
     2161 agcaagggac gcggcggatg gaccggaatc gcgggcgtca ccggcgcggg ctggtccagg
     2221 cgggcccgca ggcgttcgag caggatcttc cccaccgtga gccgctggta gcgggcgtcc
     2281 gtggcctcca ccacgatcca gggcgcaccg gcggtgctgg tggaacgcag ggcccgctcg
     2341 gccacctggc ggaaggtgtc gtacatctcg aagtgcttcc agtcccgggg tgtcacgcgc
     2401 cagcgggtct tggggtcctt ctccaggccc ttgagccgct tcttctgctg ctccttgccc
     2461 aggtgcatcc agaacttcag caccagggcg ccctcctgga tgagcatctg ctcgaagcgc
     2521 gccacccgcg ccatgtcctg gtccaggtcc gaggtcttga tgcggccatg ggcccgctcg
     2581 aggatgggcc aggtgtacca ggagccgtcg aagatcccga tcttcccctt gggcggcagc
     2641 atgcgccagt agcgccacat gtggggccgc tcgcgctcct cgtccgaggg ctcgtccagg
     2701 ccgtgggtct ggatgtggcg gggatccatc cactcgttga gggtgttcac cgtttcgctc
     2761 ttgccggccc cgtccacgcc cgccaccagg atgaccaccg ggaacttcgc cgccgccagg
     2821 tcgtactggg cgtccagcag cgcctcccgc agggcgggaa cctcccggtc ccagactccc
     2881 ttgtcgatcc tgtggccgag ctccgcggat tcgaacatgg tccctccggg gcggtgcacc
     2941 tgccttttcg gctttgca
//
LOCUS       DASUDT010000378         2581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_282867, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000378 DASUDT010000000
VERSION     DASUDT010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282867"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..714
                     /locus_tag="VFV26_07730"
     CDS             <1..714
                     /locus_tag="VFV26_07730"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX4846096.1"
                     /translation="VVADLTSGNARELLSGFDLICDGTDNFEARFLINDVAILTGTPW
                     IYAGAIGGEGVVWPLNPPRTPCLRCLIEEPPTGGDVDTCDSAGVLGPAVGVIASWAAL
                     EAMKVLTGKAPHTDLVRFDFWHDERQFLKPPKTRCRFCTERITEFLDARWTLKASALC
                     GLEGVQIRVNPPGKLDLAALKTRLETRTRSPWKQAGMMLKGQDGADEITLFADGRALV
                     HGPMTPERARSWYTEVVGC"
     gene            883..1482
                     /locus_tag="VFV26_07735"
     CDS             883..1482
                     /locus_tag="VFV26_07735"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX4846097.1"
                     /translation="MLKVLLASRNAGKLREFAELLPDVHLIPWPQEAPELPETGAFFQ
                     DNALQKAEGAREWWLAHGTESVDGVLADDSGLCVDALWGGPGVLSARFAPDLGSYRDK
                     NHRLLAMVPEGADRGARFVCVLAFAPRRGEPFTASGAVEGSLAFEPRGEGGFGYDPIF
                     VPEGFDHTFGELPGEVKHTLSHRARACVALRTRLAAERP"
     gene            1515..2429
                     /locus_tag="VFV26_07740"
     CDS             1515..2429
                     /locus_tag="VFV26_07740"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4846098.1"
                     /translation="MTWKREPRTWLAIAGVLLLWASAFAGIRAGMRLTPAGLPGADGY
                     GPGQLALLRFGTASVVLALYALATRMRLPERKDLPVIALSGFLGISVYHVALNFGEVT
                     VQAGAASLLISAGPVFTALLSAVFLRERLTRIGWGGILAAFTGVALIALSGGRGLRFT
                     PGALLILLSAAVAAVYSILSKRSFKRHTALEFTCYSIWAGTLPMLVFLPGLARQLPAA
                     APSATLAVVYLGLFPGAIAYVLWNLALSRMPASLLSSFLYLSPVLASFIAWVWLGELP
                     TLLTLLGGAIAIFGVILVQTKGSARNRP"
BASE COUNT          365 a          953 c          841 g          422 t
ORIGIN      
        1 gtggtggcgg acctcacctc cggcaacgcc cgggagctgc tctccggctt cgacctcatc
       61 tgcgatggca ccgacaactt cgaggcccgc ttcctcatca acgacgtggc catcctcacg
      121 ggcaccccct ggatctacgc cggcgccatc ggcggcgagg gcgtcgtctg gcccctgaac
      181 ccgccccgca cgccctgcct gcgctgcctc atcgaggagc cccccaccgg cggcgatgtg
      241 gacacctgcg acagcgcggg cgtactgggc cccgccgtgg gcgtcatcgc cagctgggcg
      301 gccctggagg ccatgaaggt gctcaccggg aaggcccccc acaccgacct ggtgcgcttc
      361 gacttctggc acgacgagcg ccagttcctg aagcccccga agacccgctg ccgcttctgc
      421 acggagagaa tcaccgaatt cctggacgcc cgctggaccc tcaaggccag cgccctctgc
      481 gggctggaag gcgtgcagat ccgcgtgaac ccgcccggaa agctggacct ggccgccctg
      541 aaaacccgcc tcgagacccg cacccgcagt ccctggaaac aggccgggat gatgctcaag
      601 ggccaggacg gcgccgacga gatcaccctc ttcgccgacg gccgcgccct cgtccacggc
      661 cccatgaccc ccgaacgggc ccgcagctgg tacacggaag ttgtcgggtg ctgaagactg
      721 aaagaatgag ataagcggag gagaacggag gggcggagga gagcggaggc gcttcaggac
      781 gtagccccat gagccccctg gttcctttct ccgctttcct ccgttcttct gcttccctcc
      841 gctttcaaca ttccttagct ctgatgaaca ggtgatgcct cgatgctgaa agtccttctt
      901 gcctcccgga acgccggcaa gctgcgcgag ttcgcagagc tgctgccgga cgtccacctg
      961 atcccctggc cgcaggaagc ccctgagctg ccggagaccg gcgccttttt ccaggacaac
     1021 gccctgcaga aggccgaagg ggcgcgggag tggtggctcg cgcacggcac ggagtccgta
     1081 gacggcgtgc tggcggacga ttcgggcctc tgcgtggacg cgctgtgggg cggccccggc
     1141 gtgctgagcg cccgcttcgc gccggacctg ggttcgtacc gggacaagaa ccatcgcctc
     1201 ctggccatgg ttcccgaggg cgcagatcgc ggcgcccggt tcgtgtgcgt gctggccttc
     1261 gcgccccgca ggggcgagcc cttcaccgcc agcggcgccg tggagggcag cctggccttc
     1321 gaaccccgcg gggaaggcgg cttcggctac gaccccattt tcgttcctga gggattcgac
     1381 cacacctttg gcgaactgcc cggcgaggtg aaacacaccc tcagccaccg ggcccgcgcc
     1441 tgtgtggccc tgcgaacgcg gctcgcggcg gagcgtccat agcgcggctt tccgccctcc
     1501 gatagggtgg aaggatgacg tggaaacggg aaccccgaac ctggctggcc attgcgggcg
     1561 tgctgctgct ctgggcctcg gccttcgcgg gcatccgggc cggcatgcgg ctcaccccgg
     1621 cgggcctgcc cggcgccgac ggctacggcc caggccagct ggccctgctg cggttcggaa
     1681 cggcctccgt cgtgctggcc ctctatgccc tcgctacgag gatgcggctg ccggagcgga
     1741 aggacctgcc cgtgatcgcc ctctccggct tcctgggcat cagcgtctac catgtggccc
     1801 tgaacttcgg cgaggtgacg gtccaggccg gggccgcctc gctgctcatc tccgcgggcc
     1861 ccgtattcac cgcgctgctg tcggcggtct tcctgcgcga gcgcctgacc cgcatcgggt
     1921 ggggcggcat cctggcggcc ttcacggggg tggcgctcat cgccctcagc ggcggccggg
     1981 ggctgcgctt cacgcccggg gccctgctca tcctgctttc cgccgccgtc gcggccgtct
     2041 attccatcct gtcgaagcgg agcttcaagc ggcacaccgc cctggagttc acctgctatt
     2101 ccatctgggc gggcacgctg cccatgctcg tgttcctgcc ggggctggcg cgccagctgc
     2161 ccgcggccgc cccctcggcg accctggcgg tggtctacct gggcctcttc cccggagcca
     2221 tcgcctacgt cctgtggaac ctcgccctgt cccggatgcc cgcctcgctc ctgtcgagct
     2281 tcctgtacct gtcccccgtg ctcgccagct tcatcgcctg ggtgtggctc ggcgagctgc
     2341 ccacgctgct caccctgctg ggcggagcca tcgccatctt cggcgtcatc ctggtgcaga
     2401 cgaagggctc ggccagaaac cgaccctagg cggtttcaca ccaagtcgcc accaatgata
     2461 gagattcacc acggagccac ggaatccacg gagatggcac ggagacctcc gcgttcctcc
     2521 gacatgggca ggccagaggc cgcttccggc cacgccggaa gccacgggag gcgccgggtc
     2581 c
//
LOCUS       DASUDT010000379         4763 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_592105, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000379 DASUDT010000000
VERSION     DASUDT010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4763
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_592105"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VFV26_07745"
     CDS             complement(<1..558)
                     /locus_tag="VFV26_07745"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX4846099.1"
                     /translation="MTEGPADIDLLDLLIVGAGPAGIATAVEARRAGIQRILLLEKGP
                     SHSFSIEKLYTPGKRVDKVYLGQQVECEGSVCIVDGNRETVLEALDGFVREYGLEIRS
                     GTEVSRITPLEGGGFEAVDAQGATYRARTVVIAIGVFGRPNKPDYPIPPTLKGHVHFD
                     LAEGIPPGVSVLVVGGGNTALEYVEY"
     gene            645..1565
                     /locus_tag="VFV26_07750"
     CDS             645..1565
                     /locus_tag="VFV26_07750"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX4846100.1"
                     /translation="MLIDFAAITHPGKVRRNNEDAYLLSALDGEEPIINAPASSLKVG
                     EPGLLVAVADGMGGAAAGEVASREGLAAVALYLFGHWGRLAPGKGREADLIKALEAAV
                     AEASDAVLRYSDDDRTARGMGSTLTAAVIWNGCAYVAQIGDSRAYLLRQGALYQITED
                     QTLVNDLVAQGTLTKEQARTHPQRNMITQALGSPQPLRVALSRVALRRGDRLLCCSDG
                     LHGEVADGRIREVLDLKLSPRRCLELLLEDAIAMGARDNVTGVMLALNDPGLPLPVAG
                     EPLDVLHPDARDQGRGFWGRLRGLFGGGAS"
     gene            1562..2173
                     /gene="rdgC"
                     /locus_tag="VFV26_07755"
     CDS             1562..2173
                     /gene="rdgC"
                     /locus_tag="VFV26_07755"
                     /inference="COORDINATES: protein motif:HMM:NF016281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEX4846101.1"
                     /translation="MSMLQGTVSLKRFLVLGPVPDEKELQGGLAQDQFRPFQDGMEEE
                     RMGWCDWRNPLITPPDGDWVSQERFAVFGLRIDTRRVPPALLKAHVDLRLQSLQKEKD
                     LAFIGKEARISLADEVKIELLRKVLPSPKVVEVAWDLKNGILWTTASSSKAQGALASL
                     FIKSFGCEIHPLAPLVLAGRLSPHLSVEGLMGLDPLDLELEEA"
     gene            2174..2722
                     /locus_tag="VFV26_07760"
     CDS             2174..2722
                     /locus_tag="VFV26_07760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846102.1"
                     /translation="MKPLELMEQGRFLGEEFLLWLWMRSMTEGGASGEDGDGSGCFVD
                     DAIQLASERGEVKEISLRKGNPSESREAFESLGRGMRPVKMKLRILSGDLEWVFTLNA
                     ATLDMGTLKLPPSTGKAPHERLHDRIFLLEEGAGHLERRLKIFLQARAEDPGGMEESM
                     RAWVRAGRTGEALATGEAPWEA"
     gene            2710..4380
                     /locus_tag="VFV26_07765"
     CDS             2710..4380
                     /locus_tag="VFV26_07765"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX4846103.1"
                     /translation="MGGLIGRGILLLPAVLAAAAQDPAPVIAHARTPEGRAILLRLQF
                     RKGLSVEGKALPRAFLAKGADLSGWVAFEALSPAGKRWALAALFPGDQWRQEEVHHRI
                     AHPEVESVWTLAALFTGHGQNYDKLMAENPELPEKLREGDTWRIPRSLLSADLGGSGL
                     RPDRTQPEDDLDDEARVAAYRGLLSFGEDAQGKFAAYRMRKGEALYSSVVIRFTDRVD
                     PKGVNELAERIARRNGIADVRSIQPGQLIKIPTDYLADPFQAEGSSELAEEREIRAEV
                     RRTVRVEAGPRLKGVRIVLDAGHGGVDPGAQANGLWESDFVYDIAMRVRRLLEQETEA
                     QVSSTIRYPGLGFKSREAIRTPSRAADILTTPPFAVDGESPSAVSVHLRWVLANDHFA
                     AFRKAKGDAQKTLFLSFHADSLHPSARGSMVYVPGAALVPSTFALGGAKTGRVAEAKR
                     SGRVAFTTREKLQGEARSRQFSETLLKALHKDRIPIHANRPIRNVIHRGHGKWVPAVI
                     RYSTGATKALIEVANLTNEDDAGNLRDPEFRERYAVAVVNAIRAYYRK"
     gene            4465..>4763
                     /locus_tag="VFV26_07770"
     CDS             4465..>4763
                     /locus_tag="VFV26_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846104.1"
                     /translation="MRLLLVAFLLMAGLGCRKPEAMAAPQARLMVRFLDRDAVLALAM
                     PPAEGPWRLMNAGLWEPLEVRWKPGAPRLGAAVVGRTAPEWVLLEDPAGDTHRVIL"
BASE COUNT          749 a         1687 c         1620 g          707 t
ORIGIN      
        1 gtactccacg tattccaggg cggtgttgcc gccgcccacc accagtacgc tgactccggg
       61 gggaatgccc tcggccagat cgaagtggac atggcccttg agggtggggg ggatgggata
      121 gtccggcttg ttggggcgcc cgaagacgcc gatggcgatg accacggtcc gggcccggta
      181 ggtggcgccc tgggcatcca ccgcctcgaa tccaccgccc tccagcggcg tgatgcggct
      241 gacctcggtg ccgctgcgga tctccaggcc gtactcccgc acgaacccgt caagcgcctc
      301 cagcacggtc tcccggttgc cgtccacgat gcagaccgag ccctcacact ccacctgctg
      361 tcccaggtag accttgtcca cccgcttgcc gggggtgtag agcttttcga tggagaagct
      421 gtggctgggg cccttttcca gcaggaggat gcgttggatg cccgcccggc gggcttccac
      481 ggctgtggcg atccccgccg gccccgcccc cacgatgagc aggtccagaa gatcgatatc
      541 cgcgggtcct tccgtcatgg attccccttt cctcccgcta tgatgaacgg aaagggctgt
      601 ccgtaccttc ccgaaccctc catgcgccag ggttgcattt cctcatgctt atcgatttcg
      661 ccgccatcac ccatccgggc aaagtccgga ggaacaacga agacgcctac ctgctgagcg
      721 cgctggatgg cgaagagccc atcatcaacg ctccggccag ttctctgaag gtgggcgaac
      781 cgggtctgct ggtggccgtg gccgatggca tgggcggggc cgcggcgggg gaagtcgcca
      841 gccgggaggg cctggcggcg gtcgccctgt atctcttcgg ccactggggc cgcctcgcgc
      901 ccggcaaggg ccgggaagcc gatctcatca aggccctgga agccgccgtg gccgaggcca
      961 gcgatgcggt cctgcgctat tccgacgacg accgcacggc ccggggcatg ggctccacgc
     1021 tgacagccgc ggtcatctgg aacggttgcg cctacgtggc ccagatcggc gattcccggg
     1081 cctacctgct gcgccagggc gcgctgtacc agatcaccga ggaccagacc ctggtgaacg
     1141 acctggtggc ccaaggcacg ctcaccaagg agcaggcccg cacccatccc cagcgcaaca
     1201 tgatcaccca ggccctgggt tcgccccagc ccctgcgggt ggcgctctcc cgcgtcgcgc
     1261 tgcgccgggg ggaccgcctg ctctgctgct cggacggcct tcacggtgaa gtggccgacg
     1321 ggcgcatccg cgaagtcctc gacttgaaac tcagcccccg gcgctgcctg gaactgctcc
     1381 tggaagacgc catcgccatg ggcgcccggg acaatgtcac cggcgtgatg ctcgccctca
     1441 atgatcccgg ccttcccctt ccggtggcgg gcgaacctct cgatgtgttg cacccggatg
     1501 cccgggacca gggccgcggc ttctggggcc gccttcgggg acttttcgga ggcggcgcct
     1561 catgagcatg ctgcagggga ccgtgtccct caaacgcttc ctggtgctgg gccccgtgcc
     1621 cgatgagaag gaactccagg gtggcctggc gcaggaccag ttccgtccct tccaggacgg
     1681 catggaggaa gaacgcatgg gctggtgcga ctggcgcaac ccgctcatca cgcccccgga
     1741 cggggactgg gtcagccagg agcgcttcgc cgtgttcggg ctgcgcatcg acacccgccg
     1801 cgtgccgcct gcgctgctca aggcccatgt ggacctgcgc ctgcagagcc tccagaagga
     1861 gaaggacctc gccttcatcg gcaaggaggc ccgcatctcc ctggcggacg aagtgaagat
     1921 cgagctgctg cgcaaggtgc tgccctcgcc caaggtggtg gaagtggcct gggatctcaa
     1981 gaacggcatc ctctggacca cggcctcctc cagcaaggcc cagggcgccc tcgccagcct
     2041 cttcatcaaa tccttcggct gcgagatcca ccccctggcg cccctggtgc tggcgggccg
     2101 gctcagtccc catctgtccg tggagggcct gatgggcctg gatcccctgg atctcgaact
     2161 cgaggaggcc tgagtgaagc cgcttgaact gatggaacaa gggcgcttcc tcggcgagga
     2221 attcctgctg tggctgtgga tgcgcagcat gaccgagggc ggcgccagcg gcgaggatgg
     2281 cgacggctcc ggctgcttcg tggacgatgc catccagctg gcttccgaac ggggcgaggt
     2341 gaaggagatc tccctccgca agggcaaccc ctccgaaagc cgcgaagcct tcgaatccct
     2401 gggccgcggc atgcgcccgg tgaagatgaa gctgcggatc ctctccggcg acctggagtg
     2461 ggtgttcacg ctgaacgccg ccaccctgga catgggcacg ctcaagctgc cgcccagcac
     2521 cggcaaggcg ccccacgagc ggctccacga ccgcatcttc ctgctggagg agggtgcggg
     2581 ccacctggag cggcggctga agatcttcct ccaggcccgc gccgaggacc ccggcggcat
     2641 ggaggaatcc atgcgggcct gggtgagggc ggggcgcacc ggcgaggcac tggccacggg
     2701 cgaggccccg tgggaggcct gatcggccgg ggcatcctgc tgctgcccgc ggttctggcc
     2761 gcggcggcgc aggaccccgc gccggtgatc gcccacgccc gcacccccga gggccgggcc
     2821 atcctgctgc ggctccagtt ccggaagggc ctcagcgtcg aaggcaaggc gctgccccgg
     2881 gccttcctgg ccaagggcgc ggacctaagc ggttgggtgg ccttcgaggc tctcagtccc
     2941 gcaggcaagc gctgggccct ggcggcgctg ttccccgggg accagtggcg gcaggaggag
     3001 gtccatcacc ggatcgccca tcccgaggtg gaatccgtgt ggaccctggc ggccctgttc
     3061 accggccacg gccagaacta cgacaagctg atggcggaga atccggagct gcccgagaag
     3121 ctgcgggaag gcgacacctg gcgcatcccc cgcagcctgc tgtcggcgga tctcgggggc
     3181 agcggcctcc ggcccgaccg cacccagccg gaagatgacc tggatgacga ggcccgggtg
     3241 gcggcctacc ggggcctgct ctccttcggc gaagacgccc agggcaagtt cgccgcctac
     3301 cgcatgcgca agggcgaggc gctgtattcg agcgtggtca tccgcttcac ggaccgcgtg
     3361 gatcccaagg gcgtgaacga gctggcggag cgcatcgcca ggcgcaacgg catcgctgat
     3421 gtgcgcagca tccagccggg ccagctcatc aagatcccca cggactacct ggccgacccc
     3481 ttccaggccg agggcagttc cgaactggcg gaggaacgcg agatccgcgc ggaggtgcgc
     3541 cgcaccgtgc gcgtggaagc gggacccagg ctcaagggcg tgcggatcgt cctggacgcg
     3601 ggccacggcg gggtggatcc cggcgcccag gccaacggcc tgtgggaatc cgacttcgtc
     3661 tacgacatcg ccatgcgcgt gcgccgcctc ctggagcagg agaccgaggc ccaggtgagc
     3721 agcaccatcc gctaccccgg cctgggcttc aagagccgcg aagccatccg gacccccagc
     3781 cgcgccgcag acatcctcac cactccaccc ttcgccgtgg acggtgaaag cccctcggca
     3841 gtgagtgtcc acctgcgctg ggtcctggcc aacgaccact tcgcggcctt ccggaaagcc
     3901 aaaggagatg cccagaagac gctgttcctg agcttccatg ccgacagcct gcacccctcg
     3961 gcgcggggct ccatggtcta cgtgcccggc gcggccctgg tgccctccac cttcgccctg
     4021 ggcggcgcca agaccgggcg cgtggccgag gcgaagcgct cggggcgcgt ggccttcacc
     4081 acccgcgaga agctgcaggg cgaggcccgc agccgccagt tctccgaaac cctgctgaag
     4141 gccctgcaca aggaccgcat ccccatccac gccaaccggc ccatccgcaa cgtcatccac
     4201 cgcggccacg gcaagtgggt tcccgcggtc atccgctaca gcaccggcgc caccaaggcc
     4261 ctgatcgaag tggccaacct caccaacgag gacgacgccg ggaacctgcg cgacccggag
     4321 ttccgcgaac gctacgccgt cgccgtggtg aacgccatcc gggcgtacta tcggaaatag
     4381 cggttccgcc acggtggtgg ctgggcggca caaaggtgcc ctttgtgccg caggaatcgc
     4441 gcgaaaatgg ggcaggagga tcgggtgcgg ctgctgctgg tggcgttcct gctgatggcc
     4501 ggcctcggct gccggaagcc ggaggccatg gccgcccccc aggcgcggct catggtgcgg
     4561 ttcctggacc gggatgcggt gctggccctg gcgatgccgc ccgccgaagg cccctggcgc
     4621 ctcatgaacg cgggcctgtg ggagcccctg gaggtccgct ggaaacccgg cgccccgcgc
     4681 ctcggcgccg ccgtggtggg ccgcaccgcc cccgagtggg tgctgctgga ggatcccgcc
     4741 ggagataccc accgcgtcat cct
//
LOCUS       DASUDT010000380         2087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1829568, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000380 DASUDT010000000
VERSION     DASUDT010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829568"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1574
                     /gene="nadB"
                     /locus_tag="VFV26_07775"
     CDS             <1..1574
                     /gene="nadB"
                     /locus_tag="VFV26_07775"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEX4846105.1"
                     /translation="NNVADLLVLGAGIAGCSAALRAADLGASVVLVAKDELGGSNTAW
                     AQGGIIGLAPAEEGDSPDLLAADIEAAGAGLCRPEAVRLLAEEGPRLCRSFLWERLGV
                     PFDLGANGTPDPTAEAAHSARRIYHAKDATGLAIQTALSTAVRQHPNIRVREGLCLVD
                     LITSPHHCVSPVRVYEPIRVHGAYLFDPATGQVEGALARRTLLATGGLGYLYLHTTNP
                     PSATGDGLAAAYRASARIVNCEYLQFHPTTLYVPGKPRTLLTEALRGEGAHLVNRKGE
                     RFMAKFAPDQMELAPRDVVSRAIFQEMAASGEPCAFLDLGPVAARLDLDEHFPTVLAA
                     CRAEGIDPHRQPIPVVPAAHYFCGGVLVDLDGRTSLPGLFAAGEVACTGLHGANRLAS
                     TSLLEGLLWGSRGAEAAVRELREAGDPDPGDLASWRMPEDPEEMDPLLIDQDWGLIRS
                     TLWNYAGIVRTGARLERAKADLHYLAHRIERFYHEAPLSRELLELRSGILCARLILNA
                     ALQNPESRGCHYRVD"
     gene            complement(1725..>2087)
                     /locus_tag="VFV26_07780"
     CDS             complement(1725..>2087)
                     /locus_tag="VFV26_07780"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HEX4846106.1"
                     /translation="DTPTFRLLKQLLPGPYTVLLPASREVPRYLQNKQVVGLRIPDQP
                     FCRALVALLGEPIITTSASLPDQPVLNTAWELEEEQGHALDLVVDCGQPLGTPSTIVD
                     LSGDEPLLIREGAGAWPV"
BASE COUNT          293 a          749 c          760 g          285 t
ORIGIN      
        1 tgaacaacgt ggcagatctg ctggtgctgg gcgcggggat cgccggctgc tcggcggccc
       61 tgcgtgcggc ggatctgggc gcttccgtgg tgctggtggc caaggacgaa ctgggcggca
      121 gcaacaccgc ctgggcccag ggcggcatca tcgggctggc gccggcggag gagggcgatt
      181 ccccggacct gctggccgcg gacatcgaag cggcgggcgc cgggctctgc cggccggagg
      241 ccgtgcgcct gctggccgaa gaagggccga ggctctgccg cagcttcctc tgggagcgcc
      301 tgggcgtgcc cttcgacctg ggcgccaacg gcacgccgga ccccacggcg gaggcggccc
      361 acagcgcccg gcgcatctac cacgccaagg acgccacggg actggccatc cagaccgccc
      421 tcagcacggc cgtgcggcag catccgaaca tccgggttcg ggaggggctc tgcctggtgg
      481 acctcattac gagcccccac cactgcgtca gccccgtgcg ggtctacgag cccatccgcg
      541 tccacggcgc ctacctcttc gacccggcca cgggccaggt ggaaggggcc ctggcccgcc
      601 gcaccctgct ggccacgggc ggcctcggct acctctacct gcacaccacc aatcccccca
      661 gcgccacggg cgacgggttg gcggcggcct accgggccag cgcccgcatt gtgaactgcg
      721 aatacctcca gttccatccc acgaccctct acgtgccggg caagccgcgg accctgctga
      781 cggaggccct gcggggggaa ggcgcgcacc tggtgaaccg caagggcgag cggttcatgg
      841 cgaagttcgc cccggatcag atggagctgg ccccccgcga cgtggtgagc cgggccatct
      901 tccaggagat ggccgccagc ggcgagccct gcgccttcct ggacctgggg cccgtggccg
      961 ccaggctgga cctggacgag cacttcccca cggtgctggc ggcctgccgc gccgagggca
     1021 tcgaccccca ccgccagccc atccccgtgg tgcccgccgc ccactacttc tgcggcggcg
     1081 tgctggtgga tctcgacggc cgcaccagcc tgccggggct cttcgccgcc ggggaggtgg
     1141 cctgcacggg ccttcacggc gccaatcgcc tggcctccac cagcctgctg gagggcctgc
     1201 tctggggctc ccgcggcgcc gaagcggccg tgcgggaact ccgcgaggcg ggggatccgg
     1261 accctgggga tctggcctcc tggcgcatgc cggaggatcc ggaggagatg gacccgctgc
     1321 tcatcgacca ggactgggga ctcatccgca gcaccctctg gaactacgcg ggcatcgtgc
     1381 gcacgggggc ccggctggag cgggccaagg ccgatctgca ctacctggcc caccgcatcg
     1441 agcgcttcta ccacgaggcc ccgctcagcc gcgagctgct ggagctgcgc agcggcatcc
     1501 tctgcgcccg cctgatcctc aatgccgccc tgcagaatcc cgaaagccgg ggctgccact
     1561 accgggtgga ttgatcccgc cccctcaagc tggtgggcgg gcctgcgccg gccttcgatc
     1621 tggagggcgc cctccggcgg atcgagggcc tcaaacggga cggtcttctc agcggagagg
     1681 aatgccagat gctccggaag aaggcggccg ggaaggcgaa atgatcagac cggccaggcg
     1741 cccgcccctt cccgtatgag caggggctcg tcgccgctga ggtccacgat ggtgctgggg
     1801 gtgcccaggg gctggccgca gtccaccacc aggtccaggg cgtggccctg ctcctcttcg
     1861 agctcccagg cggtgttgag cacgggctgg tcgggcaggg aggcgctggt ggtgatgatg
     1921 ggttcgccga gcagggccac cagcgcccgg cagaagggct ggtccgggat gcggaggccc
     1981 accacctgct tgttctggag gtagcgcggc acctcgcggc tggcgggcag cagcaccgtg
     2041 taggggcccg gcagcagctg cttcaggagg cggaaggtgg gggtgtc
//
LOCUS       DASUDT010000381         5680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_371659, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000381 DASUDT010000000
VERSION     DASUDT010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5680
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371659"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VFV26_07785"
     CDS             <1..768
                     /locus_tag="VFV26_07785"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846107.1"
                     /translation="TGAGLVADDSNLVIRAWRLLEEAAKRPLPAALRLEKRIPHGAGL
                     GGGSSDAAAALRLGNRMFELGLPDSELLRMAARLGSDVPLFLLGGTVLGIGRGERVFP
                     LRPVPLEPILLVHPGLHVGTPGVYRALQDVGYPFPEALASQPGGAAPPGATTSPARPC
                     GSARPWRRCAMPCATPAATPCSAAPAAAGRRATPRPRIGRPPQPSSGPPIPAGGSGRR
                     EPLSTGDRTVSAFAPAAIRAAWAPGARSGGGREALNQ"
     gene            791..2059
                     /locus_tag="VFV26_07790"
     CDS             791..2059
                     /locus_tag="VFV26_07790"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4846108.1"
                     /translation="MTSSKRARLAIFLTVFVDLLGFGIVIPILPLYAKAIADHPSGWM
                     ESVNQFLGLGGTGTTPGAFWAGVGFLSFSLMQFIASPILGRMSDMVGRKPVLWMSLMG
                     TTVGYLMLALTSRFEWMLAARILDGITGGNISVAQAAMADTSDPSERSQVMGMIGAAF
                     GLGFVLGPALAGVLSGSGLGHHLLATRGWHLPFFVAAALSLTASLMVLFWLPETLTDE
                     VRARARSHESRGHALLKAFKRRGMPQLLGVSLLAMAGFAMMEGTFALLVQQRFGFQQR
                     EVGYLFAGIGVLLVIYQGGLVRLVSKRIPERAALIAGLVMMGIALPLMPVAAWMWPFL
                     LIFIPLSWGSGMGNTAGTALASQLTPPEDQGSLFGVLNAMTGLGRIIGPAAGTFIFAR
                     WGGQATYTAAGITLGLALLLALTLSRKEPA"
     gene            2056..3546
                     /gene="hutH"
                     /locus_tag="VFV26_07795"
     CDS             2056..3546
                     /gene="hutH"
                     /locus_tag="VFV26_07795"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX4846109.1"
                     /translation="MIRLDGKSLTASLLARIAAGEGVSLDEGALALVAENRAVVDRIV
                     AEGRTVYGINTGFGQFATVVIPPDQLQLLQLNLIRSHAAGVGEPLPKDQTRALMAARI
                     NCLLKGHSGIRPEPIRLLMECLNRDVVPVVPCQGSVGASGDLAPLAHMALLLVGEGLA
                     WQGGAHIPGGEALAKAGLKPVVLQAKEGLALINGTQLITSLGNLAVEKFTRLADLADE
                     IAGLSLEALRGTRAAFDPRIHAARPHPGQIAVAGRMREILGDTSEISESHKDCHRVQD
                     AYSLRCLPQVHGVTRDALGFAGAILERELNSATDNPMIFTDTQESRSGGNFHGQYPAF
                     ACDVLAIAAADLASISERRQERLVNPAYSDLPAFLTQNGGLESGFMMAHVTSAALVSE
                     MKGLAHPACVDTIPTSAGKEDHVSMGPIAARKLLRAVDALEQVLAIEARMALEGLRIV
                     GLAPAKGLQPLMDRLAEACAPWTDRVMFVEIQATLGALRAHQEARP"
     gene            3543..4223
                     /locus_tag="VFV26_07800"
     CDS             3543..4223
                     /locus_tag="VFV26_07800"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX4846110.1"
                     /translation="MTLPTPWRTACEEALRRFSDADAIRFWGIGHEVDGAYQPIFNYR
                     FEHTYAAVLLARWLAPAVGADGEVVECAAWLHDVAKRLKDPHARDTHAQEASAQVAEI
                     LAGTDFPPEKIPGVRHAIEHHVGLKLTKRLEPLETACLWDCDKLSKIGAASLIHFGCI
                     SGAFQPITTAEILRRGEAWLDLARDITASFNTAPAREEGRRRLAFIEAHYAQLRREWS
                     DPIRTMPA"
     gene            4190..>5680
                     /locus_tag="VFV26_07805"
     CDS             4190..>5680
                     /locus_tag="VFV26_07805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846111.1"
                     /translation="MVRPHPDDARMSDFLQLAQTLAMALKALQMYTAAHPRAQEALAA
                     AHAALTRWLADSARLQFVVTGAKAFADGAVQDGRNPHVATLVRLVSERSVSGFVFEQG
                     VTEGECLAFLQALSLKPQKLEEQGGIEHLLQAADVRRIKVSQIRYQAVHEGEEGAADD
                     PKPPAGQDGPAPVPIEKLLREALLATLSGAPGGPADLGGLGPLGHKLGLGDGTPDADQ
                     LALLRQIVMDLAPEAQLRLVAGLATLPEHPAGLTLGLHALAGDLLAAATRSALAGGMS
                     WTRLRGPLEQILRPLPDRESLLRTLVAQLQEAGQDTSHAEAMLRLADWDSLSLEAKLV
                     KALEEGYLFELSVPQRLAFLRELLDLRRFGAFLQIQEALVEALRDDQVEIRLKAAQTL
                     AGVSRWALEPGLPPGSEGALAEALHAHFAWEPDPPVHQWTTEALDALLSSLVPRGDLG
                     RVVSDLRELDELCAFLGEPQPWRLAALERLRGSLVRPAMMDAVVIHI"
BASE COUNT          771 a         2173 c         1887 g          849 t
ORIGIN      
        1 acgggcgctg gcctcgtggc cgacgactcc aatctggtga tccgggcctg gcgcctgctg
       61 gaggaggccg ccaagcgccc cctgcccgcg gccctgcgcc tggagaagcg catcccccac
      121 ggcgccgggc tgggcggggg cagcagcgat gcggccgccg ccctgcgcct gggcaaccgg
      181 atgttcgagc tgggcctgcc cgacagtgaa ctgctgcgca tggcggcccg gctgggcagc
      241 gacgtgcccc tgttcctcct gggtggcacc gtgctcggca tcggccgcgg cgagcgcgtg
      301 ttccccctgc gtcccgtgcc cctggagccc attctgctgg tgcatcccgg cctccacgtg
      361 ggcacgcccg gtgtctaccg ggccctgcag gatgtgggct accccttccc cgaggccctg
      421 gcctcccagc ccggtggggc cgccccccct ggcgcaacga cctcaccggc gcggccctgt
      481 gggtctgccc gcccctggcg gaggtgcgcg atgccctgcg cgacaccggc ggcgaccccc
      541 tgctctgcgg ctccggcagc tgctgggcgg cgcgctacgc cacggccgcg catcgggagg
      601 ccgccgcagc catcctccgg ccctcccatc ccggctgggg gatctggcag gcgtgaacct
      661 ctctccacgg gagatcgcac ggtatccgcc ttcgccccgg cggcgataag ggccgcatgg
      721 gcccctgggg cccgttccgg tggaggcagg gaggccctga accagtagac tggtgggctg
      781 gagaacctcg atgacgtcgt ccaaacgcgc ccggctggcc atcttcctca ccgttttcgt
      841 cgacctcctc ggctttggca tcgtcatccc gatcctgccc ctctacgcca aggccatcgc
      901 ggaccacccc agcggctgga tggagagcgt caaccagttc ctcggcctcg gcgggacggg
      961 caccacgccc ggcgccttct gggccggggt gggcttcctc agcttcagcc tcatgcagtt
     1021 catcgcctcg cccatcctgg ggcggatgtc ggacatggtg ggccgcaagc cggtgctgtg
     1081 gatgagcctg atgggcacga cggtcgggta cctgatgctg gccctcacca gccgcttcga
     1141 atggatgctg gcggcccgga tcctggatgg catcacgggc gggaacatct ctgtggcgca
     1201 ggccgccatg gcggacacct ccgatccttc cgagcgctcc caggtcatgg gcatgatcgg
     1261 cgccgccttc ggcctgggct tcgtgctggg cccggcgctg gccggcgtcc tcagcggcag
     1321 cggcctgggg caccacctgc tggccacccg cggctggcac ctgcccttct tcgtggccgc
     1381 ggccctttcg ctgaccgcct ccctgatggt cctgttctgg ctgccggaga ccctcacgga
     1441 cgaggtccgg gcgcgggccc gctcccacga gagccgcggc cacgccctcc tgaaggcctt
     1501 caagcggcgc ggcatgcccc agctgctggg cgtgtccctg ctggccatgg ccgggttcgc
     1561 catgatggag ggcaccttcg ccctcctggt ccagcagcgc ttcggcttcc agcagcgcga
     1621 ggtgggctac ctcttcgccg gcatcggcgt cctcctcgtg atctaccagg ggggcctggt
     1681 gcgtctggtg tccaagcgca tccccgagcg ggccgccctc atcgcgggcc tggtgatgat
     1741 gggcatcgcc ctgcccctga tgcccgtcgc cgcctggatg tggcccttcc tgctgatctt
     1801 catcccgctc tcctggggca gcggcatggg caacaccgcc gggacggccc tggccagcca
     1861 gctcacgccg cctgaagacc agggcagcct cttcggcgtg ctgaacgcca tgacgggcct
     1921 gggccgcatc atcggccccg ccgcaggcac cttcattttc gcccgctggg gtggccaggc
     1981 cacctacacc gccgcgggca tcaccctggg gctggccctg ctgctggccc tgacgctctc
     2041 ccgcaaggaa cccgcatgat ccgcctcgat ggaaagtccc tgaccgcctc cctgctggcc
     2101 cgcatcgccg ccggcgaagg ggtttccctg gacgagggcg ccctggccct ggtggccgag
     2161 aaccgggccg tggtggaccg catcgtggcc gaaggccgca cggtctacgg catcaacacg
     2221 ggcttcggcc agttcgccac ggtggtgatc cccccggacc agctccagct gctccagctc
     2281 aacctgatcc gcagccacgc cgcgggcgtg ggggagccgc tgcccaagga ccagacccgc
     2341 gccctcatgg ccgcccgcat caactgcctg ctgaagggcc acagcggcat ccgccccgag
     2401 cccatccgcc tgctgatgga atgcctgaac cgtgacgtgg tgcccgtggt gccctgccag
     2461 ggcagcgtgg gcgccagcgg cgatctggct ccgctggccc acatggccct gctgctggtg
     2521 ggcgaagggc tggcatggca aggcggggcc cacatccccg gcggcgaggc cctggcgaaa
     2581 gccggcctga aacccgtggt cctgcaggcc aaggagggcc tggccctcat caacggcacc
     2641 cagctcatca cctccctcgg caacctggcc gtggagaagt tcacccggct ggcggatctg
     2701 gcggacgaga tcgccggcct cagcctggag gccctgcggg gcacccgcgc cgccttcgat
     2761 ccgcgcatcc atgccgcccg gccccatcca ggccagatcg ccgtggccgg gcgcatgcga
     2821 gaaatcctgg gtgataccag cgagatctcg gaaagccaca aggactgcca ccgcgtgcag
     2881 gacgcctaca gcctgcgctg ccttccccag gtgcacggcg tgacccgcga tgccctgggc
     2941 ttcgccggcg ccatcctcga gcgggaactc aacagcgcca cggacaatcc gatgatcttc
     3001 acagacaccc aggagtcccg ttccggtggc aacttccatg gccagtaccc cgccttcgcc
     3061 tgcgatgtgc tcgccatcgc cgcggcggac ctcgccagca tctccgagcg ccgccaggag
     3121 cgcctggtga accccgccta ctcggacctg cccgccttcc tcacccagaa cggcggcctc
     3181 gaatccggct tcatgatggc ccacgtcacc tccgcggccc tggtcagcga gatgaagggc
     3241 ctggcccacc ccgcctgtgt ggacaccatc cccaccagcg ccggcaagga ggatcacgtg
     3301 agcatggggc ccatcgccgc ccgcaagctc ctccgcgccg tggacgccct tgagcaggtg
     3361 ctggccatcg aggcccgcat ggccctcgaa gggctccgca tcgtgggcct ggctcccgcc
     3421 aagggcctgc agcccctgat ggaccgtctg gcggaggctt gcgccccctg gaccgaccgc
     3481 gtcatgttcg tggagatcca ggccaccctc ggcgccctcc gggcccacca ggaagctcgt
     3541 ccatgaccct gcccacccct tggcgaaccg catgcgaaga ggcgctccgg cgcttctcgg
     3601 atgccgacgc catccggttc tggggcatcg gccacgaggt ggatggcgcc taccagccca
     3661 tcttcaacta ccgcttcgag cacacctatg ccgcggtgct cctggcccgc tggctggccc
     3721 ccgcagtggg ggccgatggg gaggtcgtcg aatgcgccgc ctggctgcat gacgtggcca
     3781 agcgcctgaa ggacccccac gcccgggaca cccacgccca ggaggcttcg gcccaggtgg
     3841 cggagatcct cgcgggcacg gattttccgc cggagaagat ccccggcgtg cgccacgcca
     3901 tcgagcacca cgtgggtctg aagctcacga agcgtctgga gcccctggag accgcctgcc
     3961 tctgggactg cgacaagctc agcaagatcg gcgcggcgag cctcatccac ttcggctgca
     4021 tcagcggcgc cttccagccc atcaccaccg ccgagatcct gcgccgcggc gaggcctggc
     4081 tggacctggc ccgggacatc accgccagct tcaacaccgc gcccgcccgc gaggaaggcc
     4141 ggcggcggct cgctttcatc gaggcccact acgcccagtt gaggcgggaa tggtccgacc
     4201 ccatccggac gatgcccgca tgagcgactt cctgcagcta gcccagaccc tggccatggc
     4261 cctcaaggcg ctccagatgt acaccgccgc gcaccccagg gcgcaggagg cgctggcagc
     4321 cgcccatgcc gccctgaccc gctggctggc ggatagcgcc cgcctccagt tcgtggtcac
     4381 gggcgccaag gccttcgcgg atggcgccgt gcaggacggc cgcaaccccc acgtggccac
     4441 cctcgtgcgc ctcgtgtccg agcggagcgt gagcggcttc gtcttcgagc agggcgtcac
     4501 ggaaggcgaa tgcctggcct tccttcaggc cctgtctctc aagccgcaga agctggagga
     4561 gcagggcggc atcgagcacc tcctccaggc tgccgatgtg cggcgcatca aggtctccca
     4621 gatccgctac caggcggtcc acgagggcga ggagggtgcc gccgacgatc cgaaacctcc
     4681 cgccggccag gacggccccg cgccggttcc catcgagaag ctcctgcgag aggccctgct
     4741 cgccaccctg tccggcgcac ccggcggccc cgccgacctg ggcgggctgg gcccgctcgg
     4801 gcacaagctg gggctggggg acggcacccc cgatgccgac cagctcgccc tcctgcgcca
     4861 gatcgtcatg gacctggcgc cggaagcgca gctgaggctc gtggccggat tggcgaccct
     4921 gccggagcac cccgccggcc tgaccctcgg cctgcatgca ctggcgggcg atctgctggc
     4981 ggcggccacc cgttccgccc tggccggggg catgtcctgg acccggctgc gggggcccct
     5041 ggagcagatc ctgcgccccc tgcccgaccg cgaatccctc ctgcggaccc tggtggcgca
     5101 gctccaggag gccggccagg acaccagcca cgcggaggcc atgctccgcc tggcggactg
     5161 ggattccctc agcctggagg ccaagctggt gaaggcgctc gaagagggct acctgttcga
     5221 actgagcgtg ccccagcgcc tggccttcct ccgggagctg ctggatctcc gccgcttcgg
     5281 cgccttcctc cagatccagg aggcgctggt ggaagccctt cgcgatgacc aggtggagat
     5341 ccgcctcaag gccgcccaga ccctggcggg ggtttcccga tgggccctgg aaccgggcct
     5401 gcctccgggc agcgaggggg ccctggcgga ggccctacac gcccatttcg cctgggagcc
     5461 ggacccaccg gtccaccagt ggaccaccga ggccctggat gccctgctct cgtcgctggt
     5521 gccccggggc gacctcggcc gggtggtctc cgacctccgc gaactcgacg agttgtgcgc
     5581 cttcctcggc gagccccagc cctggcgctt ggcggcattg gagcgcctgc gcggcagcct
     5641 ggtccggccc gccatgatgg atgcggtggt gatccacatc
//
LOCUS       DASUDT010000382         2692 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1365593, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000382 DASUDT010000000
VERSION     DASUDT010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365593"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VFV26_07810"
     CDS             <1..791
                     /locus_tag="VFV26_07810"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1302 family protein"
                     /protein_id="HEX4846112.1"
                     /translation="NVAMGAPNATFGTPGYAIPGAWDGKAGLKGDGWGFGYKVGLIYE
                     PTDAFRLGLAYHGAMTMTLKGDATFAFPAALPPTDLAALNGGGLRNGKGQADLALPAT
                     ASLGLDWKVSPAFSLQAEVARSTWSRFDELRVKFTDNVAPQTTESITDESWSDTTYAS
                     LGGTWKVNQDWTLRAGLAFDQSAVDDAHRTPRIPDNDRKWVSLGASYVYSKKTTIDVG
                     FTQIFVADGKVNLTAAGDNITRGSLRGTMKASITILGASLRYTF"
     gene            complement(861..2033)
                     /locus_tag="VFV26_07815"
     CDS             complement(861..2033)
                     /locus_tag="VFV26_07815"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX4846113.1"
                     /translation="MSHAVILKSLRSPIGKFQGGLAPLAAPDLAAQVVKALLVAVPGA
                     APTEAIFGNVVGAGVGQAPARQAALRGGLPASVSALTINKVCGSGLKAIQLAANAVRL
                     GDHEVVLAGGMESMSNAPYLMPKLRAGARMGHTEAKDAMILDGLWCAMTDQHMGHTGE
                     LVADKYGVGREAQDAWAAESHRKAVAAMQSGAFLAEIVPIAVPGRKGDVMITEDESPR
                     ADSTLESLAKLRPAFKKDGTVTAGNAPSVNDGAAAALVATEDYAKAHGLPIQARILGT
                     ATAGLDPEWVLMAPVEAIRKLLAQTGWAVNDVDLWEINEAFAVQLVATMNELKLPAGR
                     INVHGGAVALGHPIGASGARVMATLLHALERHGKQRGIAALCLGGGNAIAMAVERV"
     gene            complement(2050..2601)
                     /locus_tag="VFV26_07820"
     CDS             complement(2050..2601)
                     /locus_tag="VFV26_07820"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HEX4846114.1"
                     /translation="MKYTPLDIQRREFEKAFRGIEESEVRTFLHEVAAEWEELLAENQ
                     KLKEEILDNRERLKQYQDQDRIFRETLLQAQRTREDVLDGASREKELIVREAQFKAEE
                     ILREAQQHVVELEVQLRNLKMERARFVRELESLMERTRRHIQEEAPDMYLAPPPTLNL
                     EGLDLTSLDEPPIPPIRRPKATN"
BASE COUNT          386 a          952 c          915 g          439 t
ORIGIN      
        1 ccaacgtggc catgggcgct cccaacgcca ccttcggcac ccccggctac gccattcccg
       61 gcgcctggga cggcaaggcc ggcctcaagg gcgacggctg gggcttcggc tacaaggtgg
      121 gcctgatcta cgaacccacc gacgcgttcc gccttggcct ggcctatcac ggcgccatga
      181 ccatgaccct caagggcgat gccaccttcg ccttccccgc cgccctgcct cccacggacc
      241 tggccgccct gaatggcggt ggcctccgca acggcaaggg ccaggctgat ctcgccctgc
      301 ctgccacggc ctccctgggc ctcgactgga aggtgtcccc cgccttctcc ctgcaggcgg
      361 aagtggcccg cagcacctgg tcccgcttcg atgagctgcg cgtgaagttc acggacaatg
      421 tggcgcccca gaccaccgag tccatcacgg acgaaagctg gagcgacacc acctacgcgt
      481 ccctgggcgg cacctggaag gtgaaccagg actggaccct ccgcgccggc ctggccttcg
      541 accagagcgc cgtggacgat gcccaccgca ccccccgcat ccccgacaac gaccgcaagt
      601 gggtgtccct gggcgccagc tacgtctact ccaagaagac caccattgac gtgggcttca
      661 cccagatctt cgtggccgat ggcaaggtca acctcaccgc cgccggggac aacatcaccc
      721 gcggcagcct ccgcggcacc atgaaggcct ccatcaccat cctgggcgct tcgctgcgct
      781 acaccttcta gtccgcgctt tccgccaaag caaagacccg gcatgccggg cctttgcttt
      841 gcaggggcgg ctccgccggt tcacacgcgt tcgacggcca tggcgatggc gttgccgccg
      901 cccaggcaca gggcggcgat gccgcgctgc ttgccgtggc gctccagggc atggagcagg
      961 gtggccatga cgcgggcgcc ggaggccccg atgggatggc ccagggccac ggcgccgccg
     1021 tggacgttga tgcggccggc gggcagcttc agctcgttca tggtggccac cagctgcacg
     1081 gcgaaggcct cgttgatctc ccagaggtcc acgtcattca ccgcccagcc agtctgggcc
     1141 agcagcttgc ggatggcctc cacgggagcc atgagcaccc actcgggatc caggcccgcc
     1201 gtggccgtgc ccaggatccg cgcctggatg ggcaggccgt gggctttcgc gtagtcctcg
     1261 gtggccacca gggccgcggc ggcgccgtcg ttcacgctgg gggcattgcc ggcggtgacg
     1321 gtaccgtcct tcttgaaggc ggggcgcagt ttggcaaggg attccagcgt ggaatccgcg
     1381 cgggggcttt cgtcctccgt gatcatcacg tcacccttcc tcccgggcac ggcgatgggc
     1441 acgatctcgg ccaggaaggc gccggactgc atggcggcca cggccttgcg gtggctttcg
     1501 gcggcccagg cgtcctgggc ctcgcggccc acgccgtatt tgtcggccac cagctccccg
     1561 gtgtggccca tgtgctggtc cgtcatggcg caccagaggc cgtcgaggat catggcgtcc
     1621 ttggcttccg tgtggcccat gcgggcgccg gcccggagct tgggcatgag gtagggggcg
     1681 ttggacatgg actccatgcc gccggccagc accacctcgt gatcacccag gcgcacggcg
     1741 ttggccgcca actggatggc cttgaggccg ctgccgcaga ccttgttgat ggtcagcgcc
     1801 gatacgctgg cgggcaggcc gccccgcagg gccgcctggc gggccggggc ctggcccaca
     1861 cccgccccca ccacgttgcc gaagatggcc tccgtgggcg ccgcgcccgg caccgccacc
     1921 agcagggcct tcaccacctg ggccgccagg tccggcgcgg ccaggggcgc caggcctccc
     1981 tggaacttgc cgatggggct gcggagggac ttgaggatga cggcgtggga catgggaact
     2041 ccgtgagggc taattcgtgg ccttgggccg gcggatgggc gggatggggg gctcgtccag
     2101 ggaggtgagg tccagcccct ccaggttcag ggtggggggc ggggccaggt acatgtcggg
     2161 ggcctcctcc tggatgtggc ggcgggtgcg ctccatgagg gattccagct cccggacgaa
     2221 ccgggcgcgc tccatcttca ggttgcgcag ctggacctcc agctccacca catgctgctg
     2281 ggcctcccgg aggatctcct cggccttgaa ctgggcctcg cggacgatga gctccttctc
     2341 gcggctggcg ccgtcgagca cgtcctcgcg ggtgcgctgg gcctgcagga gggtctcccg
     2401 gaagatgcgg tcctggtcct ggtactgctt caggcgctca cggttgtcga ggatctcctc
     2461 tttcagcttc tggttctcgg ccagcagctc ttcccattcc gctgccacct cgtggaggaa
     2521 ggtccgcact tcggattcct cgatgccgcg gaaggccttc tcgaattccc ggcgctggat
     2581 gtcgaggggg gtgtatttca tgcatcacct caggaggcca gggcccggag gaagacccgc
     2641 tggatgagcc caagcaccag cacggcgatg aggatgtcga agctgaagcc cc
//
LOCUS       DASUDT010000383         3363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_680507, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000383 DASUDT010000000
VERSION     DASUDT010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680507"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /locus_tag="VFV26_07825"
     CDS             complement(<1..1250)
                     /locus_tag="VFV26_07825"
                     /inference="COORDINATES: protein motif:HMM:NF024991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4846115.1"
                     /translation="MAEFPNPLGVLAGRPFAPEAWLRAAGDPGLVVVAWELARIPGDL
                     DGPTRRRLHLLLTLLLTAQAQGSSRLPLAGPHLEALHRAFGEGPVDWPAFLEDPRLAL
                     LVGGPEAGRPLVRIGDALASRRLVAAEGRIRDRIRARQASPPVDLAAPEPVLAAPVPL
                     NPEQRAAVAAAVRGPLALVTGGPGTGKTSILSAILRTLLASGLDPEAIGLAAPTGKAA
                     QRMGTAVSQAGGALPEPRTLHRLLGWDPRSGRFRHGAAHPLRLQVLLVDEASMVGLEL
                     MDALLEALPAGARLVLLGDADQLPSVEAGTVFRDLVAGVPEAVARLTRSHRLDAADPG
                     ARAILEAAQALGAGQDPALPVATGLEGMEAPGICLWPSEDADLRAFLRQWRARRPLEA
                     PVLDLRDGVLDAPSLARLEALAAG"
     gene            complement(1243..>3363)
                     /locus_tag="VFV26_07830"
     CDS             complement(1243..>3363)
                     /locus_tag="VFV26_07830"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEX4846116.1"
                     /translation="RGAVDLAENFRSTAPLLKVCERIFAHPAFFTGAVAFHPVSCGRP
                     GLGLEDAQGTPLPPLRVLRVEELSGGMRLWRRVALGLARELKDLLASGARFGPEGNRQ
                     SLSHRDVFVLVGKASEGRLMAGALGAVGLPFAFFKQKGLFQTPEAAAWLSLLRAIEDP
                     GDRGRLARALLTPFFGLSLSELEGMRDLREDHPALQRLRAWRETAHRRRFADLVEQVL
                     RDSAVAERLLLFRDGERALTNLRHLGELLVRAAAERHGDLALLIRQLRRWGRGLDFPP
                     GESGDQQRLEGRADAVQILTLHAAKGLEAPVVAVFAPGEGRGSLRRFHDGQGRRCLHL
                     GRPPKGSALEAAIAAEEAHEQERLMYVALTRAQAQLVVPCFVVDSTAKATAGQAKHPD
                     GPLRVLNRVLRPLLEAGPGGEVSVAALAALEAAVPAAPPSTLATWAPSPTAIHGPSLD
                     AAALRLRARPRRTTSFTALQKRLEETRILDAEDPEPDTPGAAPDGLPRGRHIGSLLHG
                     LLEELDPAGLAASFEGWWQDPAVREPLLRRAALAELGPEAAKEAARRVFLGFTTPLPL
                     LDGAAPLAQADRLLRETEFLTGLPGGGDFLGGSMDALFEKNGRAYVLDWKSNGLPDYG
                     AASLEACVSEHYALQVRIYTLAALRFLGLADEATYEARFGGVLYVFLRGLPGAGVWTC
                     RPSWAETRSWERELAELGAEVLRG"
BASE COUNT          451 a         1303 c         1264 g          345 t
ORIGIN      
        1 cagcccgcgg ccagggcctc caggcgggcc agggatgggg cgtccagcac gccgtcccgc
       61 aggtccagca ccggcgcctc caggggccgc cgggcccgcc actgccgcag gaaggcccgc
      121 agatccgcgt cctccgacgg ccacaggcag atgcccgggg cctccatccc ctccaggccg
      181 gtggccacgg gcagggccgg atcctggccc gcccccaggg cctgcgcggc ttccagaatg
      241 gcccgggccc cggggtccgc cgcgtccagc cggtggctcc gcgtgagccg cgccaccgcc
      301 tccggcaccc ccgccaccag gtcgcggaac acggtgcccg cttccaccga gggcagctga
      361 tccgcatcgc ccagcagcac cagccgggcg ccggcgggca gcgcctccag cagcgcatcc
      421 atgagctcca ggcccaccat gctggcctca tccaccagca ggacctgcag gcgcagcggg
      481 tgggcggccc catggcggaa gcgccccgac cggggatccc agcccagcag ccggtggagc
      541 gtgcggggtt ccggcagggc cccgcccgcc tgcgagaccg ccgtgcccat gcgctgcgcc
      601 gccttgcccg tgggcgccgc caggccgatg gcttcgggat ccaggcccga ggccagcagg
      661 gtgcggagga tggccgacag gatggaggtc ttgcccgtgc cggggccgcc ggtgaccagg
      721 gccagcggcc cccgcaccgc cgcggccacc gccgcccgct gctcggggtt gaggggcacc
      781 ggcgccgcca gcacgggctc gggcgcggcg aggtccaccg gaggcgaggc ctgccgggcg
      841 cggatccggt ccctgatccg cccttcggcc gccaccagcc ggcgggaggc cagggcgtcg
      901 ccgatccgca ccaggggccg tccggcctcc ggaccgccga ccaggagggc cagccgggga
      961 tcctccagga aggctggcca atccacgggc ccctccccga aggcgcgatg cagcgcctcc
     1021 agatgcgggc ccgccagggg caggcggctg ctcccctggg cctgggccgt cagaaggagg
     1081 gtcagcagca ggtgcagccg ccgtcgcgtg gggccgtcca gatccccggg gatgcgcgcc
     1141 agctcccagg ccaccaccac cagcccggga tcgcccgcgg cccgcagcca ggcctccggc
     1201 gcgaaggggc gcccggccag cacgccgagg gggttgggga actcagccac ggagcacctc
     1261 cgcgccgagc tccgccagct cccgctccca ggaccgcgtc tcggcccagg agggacggca
     1321 ggtccagacg ccggccccgg gcaggccccg caggaagacg tagaggacgc cgccgaagcg
     1381 ggcctcgtag gtggcctcgt ccgccaggcc caggaagcgc agcgccgcca gggtgtagat
     1441 gcgcacctgg agcgcgtagt gttcgctcac acaggcctcc agcgaggccg cgccgtagtc
     1501 cggcaggccg ttgctcttcc agtccagcac gtaggcgcgc ccgttctttt cgaacagggc
     1561 atccatgctg ccccccagga agtccccgcc gccgggcagg cccgtgagga actccgtttc
     1621 ccgcagcagg cggtccgcct gggccagggg cgcagcgccg tccagcagcg ggagcggggt
     1681 ggtgaagccg aggaacacgc ggcgggcggc ctccttcgcc gcctcggggc ccagctccgc
     1741 cagggcggcg cggcggagca ggggctcgcg gaccgcggga tcctgccacc agccctcgaa
     1801 cgatgcggcc aggccggcgg gatccagctc ctccagcagc ccgtgcagca ggctgccgat
     1861 gtgccgcccc cgcggcaggc cgtccggcgc ggcgcccggc gtgtcgggct cgggatcctc
     1921 cgcgtccagg atccgggtct cctccagccg cttctgcagg gcggtgaagc tggtggtccg
     1981 gcggggccgg gcccgcaggc gcagggccgc cgcatccagg ctgggcccgt ggatggccgt
     2041 gggcgacggc gcccaggtgg ccagcgtgga aggcggggcc gctggcacgg cagcctcgag
     2101 ggccgccagg gccgcgacgg agacctcccc gccggggccg gcttccagca ggggccgcag
     2161 cacccggttg aggacgcgca ggggtccgtc cggatgtttc gcctggcccg cggtggcctt
     2221 cgccgtcgag tccaccacga agcagggcac caccagctgg gcctgggcgc gggtgagggc
     2281 cacgtacatg aggcgctcct gctcgtgggc ctcctccgcg gcgatggcgg cttcgagggc
     2341 cgagcctttc ggcggccggc ccaggtggag gcagcgccgt ccctgcccgt cgtggaagcg
     2401 gcgcagggag ccccggccct cgccgggggc gaagaccgcc accaccgggg cctccaggcc
     2461 cttggcggcg tgcagggtga ggatctgcac cgcgtccgcc cggccctcca ggcgctgctg
     2521 gtcgccgctt tcgcccggcg ggaaatccag gccccggccc cagcggcgca gctggcggat
     2581 gagcagggcc aggtccccgt gccgctcggc ggcggcgcgg accagcagct cacccaggtg
     2641 ccgcaggttg gtgagggcgc gctcgccatc ccggaacagc agcaggcgct ccgccacggc
     2701 gctgtcccgc agcacctgct ccaccaggtc cgcgaagcga cggcggtgcg cggtctcgcg
     2761 ccaggcgcgc aggcgctgga gggccggatg atcttccctc aggtcccgca tcccctccag
     2821 ctcggaaagg gacaggccga agaagggcgt cagcagggcc cgggcgaggc ggccccggtc
     2881 cccggggtct tcgatggccc gcagcaggct cagccaggcc gcggcctcgg gggtctggaa
     2941 caggcccttc tgcttgaaga aggcgaaggg caggcccacg gcgcccaggg ccccggccat
     3001 gagacggccc tccgaggcct tgcccaccag cacgaagaca tcccgatgcg acagagactg
     3061 tcgattcccc tcggggccga accgggcccc ggaagccagc aggtccttca gctcccgggc
     3121 gaggcccagg gccacgcggc gccagagccg catgccgccg gacagctcct ccacccgcag
     3181 cacgcgcagg ggcggaaggg gcgtgccctg cgcgtcctcc aggcccagtc ccgggcgccc
     3241 gcaggagacc gggtggaagg ccacggcccc cgtgaagaag gccgggtgcg cgaagatccg
     3301 ctcgcagacc ttgagcagag gcgccgtgga gcggaagttc tccgccagat ccacggcgcc
     3361 gcg
//
LOCUS       DASUDT010000384         2762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_614763, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000384 DASUDT010000000
VERSION     DASUDT010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614763"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VFV26_07835"
     CDS             <1..658
                     /locus_tag="VFV26_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846117.1"
                     /translation="QAAQLVWNLKGDIRPFLEKAAQWNEGSQPKYIEAQRNRLDLRML
                     QLQSGAGEGLKACDALIEDCLAVEKRFRAGLPFQAGSAWRLKARAQIQAGADPSRAFA
                     EARKHFLGLERESPSNVQGYVESAFTGLEEARWRLSRGQGASAALEAARGALERFRKV
                     QADQALLFALEAALLRLEAGQALAGRRSQLLRKADDLWAQALSRNGHLGIHPGFAGFH
                     "
     gene            complement(655..1176)
                     /locus_tag="VFV26_07840"
     CDS             complement(655..1176)
                     /locus_tag="VFV26_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846118.1"
                     /translation="MAVVIVLVVLAALVLPFVGGFITQSNRTPQGTPAGTPSDSSDCS
                     VLCAEWDQRRQERCLAEATAAAAQRTVDNRRAELAVATGVAIVLAASAAAATLIPVIG
                     YVVAAVLAVAAAAALIAAEFILGELAAAGTALEQAEGRAADARQAEAAARTRLVQTCG
                     DKATACLSRPGPC"
     gene            1426..1938
                     /locus_tag="VFV26_07845"
     CDS             1426..1938
                     /locus_tag="VFV26_07845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846119.1"
                     /translation="MLKAVSLATLLICASARAQVPTTHLGVPASELVALDLAVRWDLN
                     TGVETLDQGVYQNGTWSFQSGAKPFRVPKGRTLIITDAQAWVLHEPGTGTPASLELLL
                     EHPASGYSGSMALFTFADIPANAMGVKRQTWTSGFMVPEGMTVRIWAQQFYPKSLMSM
                     ARIVLHGYYL"
     gene            1946..>2762
                     /locus_tag="VFV26_07850"
     CDS             1946..>2762
                     /locus_tag="VFV26_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846120.1"
                     /translation="MRLHLIAAGMLLSFLAACGGGGDATTQAPAPPPVPAWQTPVDLA
                     ASGYMGGALLAGDGKGAVLAAWMRTGVDAGGTPYWEQVAARLRADGTWEAPQALDGAS
                     GISGLQVPVAALDARGKGFIAWFDAVPRSTATRLRTVPVDLGAAAPFGTRATALVVDL
                     KTPANLHLATGSDGSALAAWSGLRTDTSLGADFATVQASRLEAGGAWGTPHSHHLNMY
                     SSQFLHGLAGDGRGAYTLDFSTGDDATVDNEAVDYAQGASAATAIAGWGPLSQQ"
BASE COUNT          385 a          971 c         1010 g          396 t
ORIGIN      
        1 ccaggccgcc cagctggtct ggaacctgaa gggggacatc aggcccttcc tggagaaggc
       61 cgcccagtgg aatgagggga gccagcccaa gtacatcgag gcgcagcgga accggctgga
      121 cctccgcatg ctccagctac agtcgggggc gggggaaggg ctcaaggcct gtgacgccct
      181 catcgaggac tgcctcgccg tggagaagcg gttccgcgct ggcctcccct tccaggcggg
      241 ctcggcctgg cggctgaagg cccgggctca gatccaggca ggcgctgatc cttcccgggc
      301 ctttgcggag gcccgcaagc acttcctcgg gctggaaagg gagagcccgt cgaatgtgca
      361 gggctacgtg gagtcggcct tcacgggcct ggaggaagcc cggtggcgcc tctcccgggg
      421 acagggtgcc tcggccgcgc tcgaagcggc caggggggcc ctggagcggt tccgcaaggt
      481 gcaggccgac caggcgcttc tcttcgccct ggaggccgcc ctccttcgcc tggaggcggg
      541 acaggcgctg gccgggcgcc ggagccagct cctccggaag gccgacgacc tctgggccca
      601 ggccctgagc cgcaatggcc atctcgggat ccatccgggt tttgccgggt tccactagca
      661 cgggccgggg cgggagaggc aggcggtggc cttgtcgccg caggtctgga cgagcctggt
      721 gcgggccgcg gcctccgcct gacgggcgtc ggcggcgcgg ccctccgcct gttccagggc
      781 ggtcccggcg gcggccagtt ctcccaggat gaattcggcg gcgatcaggg ccgccgccgc
      841 agccacggcg agaacggcgg cgaccacata gccgatcacg gggatgagcg tggctgcggc
      901 cgccgaagcc gccaggacga tggcgacgcc tgtggccacc gccagctcgg cccgccggtt
      961 gtccacggtc cgctgggcgg ctgccgcggt ggcctccgcc aggcagcgtt cctgtcggcg
     1021 ctggtcccac tcggcgcaga gcacgctgca gtcgctcgag tccgaggggg tgcctgcggg
     1081 ggtgccctgg ggggtccggt tggattgggt tatgaagccg ccgacgaagg gcaggaccaa
     1141 tgcggcgagc acgacgagca cgatgaccac ggccatgggg gactcctttg ttgggtgggg
     1201 tgggaaggat ggagggggat cgccaggcgg ccgaagggga ccggcggcac ggggaaggtt
     1261 cagcccctcc gccggcgccc cacaggtacg ccctcgagaa aaggggtggg ccaccgtgcc
     1321 gggagagggt ggcccaggcg gtttcgggaa agcgggcctg ggtggcgcag gccggctgga
     1381 tgagcctgtg gacatgcggc ggctgccgcc cttcccggag ttcccatgct caaggccgtg
     1441 tccctcgcca ccctgctgat ctgcgcctcc gcccgggccc aggtgcccac cacgcatctg
     1501 ggagtgcccg cctcggaact ggtggccctc gatctcgccg tgcggtggga tctcaatacc
     1561 ggcgtggaaa ccctggatca gggcgtctac cagaacggca cctggtcgtt ccagtcgggc
     1621 gcgaaaccgt tccgggtgcc caagggccga accctcatca tcacggatgc ccaggcctgg
     1681 gtgctccacg aaccggggac cggaaccccc gcctccctcg agctgctgct ggagcacccc
     1741 gcatccggct actccggcag catggccctt ttcaccttcg cggacatccc tgccaacgcc
     1801 atgggcgtga aacgccagac ctggaccagc ggcttcatgg tgcccgaggg catgactgtg
     1861 aggatctggg cccagcagtt ctatcccaag agcctgatgt ccatggcccg catcgtcctg
     1921 cacggctact acctctgagg ggcccatgcg cctacatctg atcgccgccg gcatgctgct
     1981 ctccttcctc gccgcctgtg gcggtggcgg tgacgccacc acccaggccc cggccccgcc
     2041 tccggtcccg gcctggcaga cgcccgtgga tctcgccgcg tccggctaca tgggcggtgc
     2101 cctgctggcg ggggacggga agggtgccgt cctcgccgcc tggatgcgga cgggtgtcga
     2161 cgcggggggc acgccctact gggagcaggt ggcggcccgc ctgcgcgccg acggcacctg
     2221 ggaggccccc caggcgctgg acggggccag cggcatcagc ggcctccagg ttcccgtggc
     2281 ggccctggat gcgcgtggga aggggttcat cgcatggttc gacgccgtac cccgcagcac
     2341 cgccacgcgc ctccggacgg tgccggtgga tctgggagcc gccgccccct tcggcacgcg
     2401 agccaccgcc ttggtggtgg acctgaagac gcccgcgaac ctccacctgg ccaccgggtc
     2461 cgatggcagc gccctcgcgg cctggtcggg ccttcgcacg gacaccagcc tgggggcgga
     2521 tttcgccacc gtccaggcct cccgcctcga ggcgggcggg gcctggggca ccccccactc
     2581 ccatcacctg aacatgtatt cgagccagtt cctccatggc ctggcggggg atggccgggg
     2641 ggcctacacg ctcgacttct ccacgggcga cgatgccacg gtggataacg aggccgtgga
     2701 ctacgcccag ggcgccagtg ccgcaacggc catcgcaggg tgggggcccc tctcccagca
     2761 gg
//
LOCUS       DASUDT010000385         4783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1652848, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000385 DASUDT010000000
VERSION     DASUDT010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652848"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VFV26_07855"
     CDS             <1..215
                     /locus_tag="VFV26_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846121.1"
                     /translation="EAGLGRLKGREKDIADLERLNQDLQDTVFALIQQMQFQDIARQK
                     LERVMAHLKGMQLAIAGKFRAERKGQ"
     gene            284..1585
                     /gene="asnS"
                     /locus_tag="VFV26_07860"
     CDS             284..1585
                     /gene="asnS"
                     /locus_tag="VFV26_07860"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR00457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEX4846122.1"
                     /translation="MSSQPFTEVRFLAGQIGETVRLRGWVRNARTSKTRFIELRDGSG
                     FVQCVVGAAEADPESYELAGRLTQESAITLTGLVQQHPKTGQPELLVKSLELIGGSQD
                     FPITPKEHGTEFLMENRHLWLRSKRQWAILRIRHTLVKGIRDFFDGDGFTLLDAPILT
                     PSACEGTSTLFGTEYFHEGMAFLSQSGQLYQEPGIAAFGKTYCFGPTFRAEKSKTRRH
                     LTEFWMVEPEVAFAHLDDVMALGERMTKFLIQRVLEGRQEELKILERDIAPLETALHT
                     TFDRMTYTEAVEKLKTLGSDINWGEDFGNDDETILMNATDKPLWVHRFPKAFKAFYME
                     PDPLDARLALGADLLAPEGYGEVIGGGERATSLPYLLEQIAHHELNRADYEWSLDVRK
                     YGSVPHAGFGMGLERAVAWICKLPHVRETIPYPRMMGTLRP"
     gene            complement(1730..1999)
                     /locus_tag="VFV26_07865"
     CDS             complement(1730..1999)
                     /locus_tag="VFV26_07865"
                     /inference="COORDINATES: protein motif:HMM:NF016262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 family protein"
                     /protein_id="HEX4846123.1"
                     /translation="MEACRRPDITYPFRVPMKIIGRQEELRPDMVMALILAHLGPQAE
                     GDEQHQANCKGAFISYTFWVTLPDDKAETPLREAIQKLPGVVMQL"
     gene            2046..3482
                     /locus_tag="VFV26_07870"
     CDS             2046..3482
                     /locus_tag="VFV26_07870"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4846124.1"
                     /translation="MLDRLKDLEAQSRGLDPGAEARAPMWDAARAYGEAFLQALPESP
                     AFVLKDHPGAGLGDFPIPEAGRPLAGILDTLAAQVDGVGANGASGRHLAFIPPSSLFA
                     GALGDLLSAITNRYAAYHFAGPGAVRMENQVLGWLAHEMGLPEGSSGNLASGGSMAHL
                     VGICTAREAAGLKAADYGKACVYLSDQAHHCIVKALRVAGMGEAPVRSIPTDANFRLR
                     PEALEAAIHEDLRAGLRPWLLVPTAGTTNTGAVDPLEACADLAARHGLWMHTDGAYGA
                     SFALTDLGKAALRGLERSDSLVLDPHKGLFTSLGLGAVLVRHLDPLRKAHAFQADYLP
                     SPPEDLEELSPSETTLEFSKHARALRLWLPLQLHGAAAFRAALEEKLLLARYAHGRLC
                     EMPGVDPGPVPQLSVLAFRLQPRSGDADAFNQALLQRLTAEGRVFLSGTKLNGAFHLR
                     LAILAARTHKDEVDEALERLQAAARQLA"
     gene            complement(3537..3812)
                     /locus_tag="VFV26_07875"
     CDS             complement(3537..3812)
                     /locus_tag="VFV26_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX4846125.1"
                     /translation="MIKIDIANSLMKVHPCSRATALQVVDLLTERLKDALLNGHRIEI
                     RGFGVFEPRPRKRGMGRNIKTGASVQIPKGKSIRFKPGKDLREIEVA"
     gene            complement(3863..>4783)
                     /locus_tag="VFV26_07880"
     CDS             complement(3863..>4783)
                     /locus_tag="VFV26_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEX4846126.1"
                     /translation="TIDDLMLPRVLKTICEEQRGLVLVTGTTGSGKSTTLAAMIDLIN
                     ATRTEHILTIEDPIEYLHRDNLSIVNQREVEADCKTFSSALRAALRQDPDVILVGEMR
                     DLETIETALHAAETGHLVFSTLHTLDATETINRVISVFPPHHQKQIRLQLAAVLKGII
                     SQRLVPRADGQGRVPAVEVMVATETVRTCIEDKDKTKMLKDVIAQGTAQYGMQTFDQS
                     LYFLLKQGLITEEEALLRATNVGEFKLRLEGVMASSDMAKANMERSMSIAQGGGREGG
                     GAPPPAVQPPAPGLPLAMPPAPDVKITLAR"
BASE COUNT          737 a         1614 c         1656 g          776 t
ORIGIN      
        1 aggaagcggg gctgggccgg ctcaagggtc gggagaagga catcgccgac ctggagcgcc
       61 tcaaccagga tctgcaggac accgtgttcg cgctcatcca gcagatgcag tttcaggata
      121 tcgcccggca gaagctggag cgggtcatgg cccatctgaa gggcatgcag ctggccatcg
      181 cggggaagtt ccgggcggag cgcaaggggc agtaggggtt ccacggtcca ctggagccac
      241 cctccctacc cgggcacaat aagggtttgc ctctggagtc cccgtgagca gccagccctt
      301 caccgaagtc cgattcctcg ccggccagat cggcgagacc gtccggctgc ggggctgggt
      361 gcgcaatgcc cgcaccagca agacccgctt catcgaactg cgggacggct ccggcttcgt
      421 ccagtgcgtg gtgggggccg ccgaggccga tcccgagagc tacgagctgg ccgggaggct
      481 cacgcaggaa tcggccatca ccctgacggg cctggtgcag cagcacccca agaccggcca
      541 gcccgaactg ctggtgaagt cgctggaact catcggcggc agccaggact tccccatcac
      601 gcccaaggag cacggcaccg agttcctcat ggagaaccgc cacctctggc tgcgcagcaa
      661 gcgccagtgg gccatcctcc gcatccggca caccctggtg aagggcatcc gcgacttctt
      721 cgacggtgac ggcttcacgc tgctggacgc ccccatcctc acccccagcg cctgcgaggg
      781 caccagcacg ctcttcggca ccgagtactt ccacgagggc atggccttcc tcagccagtc
      841 gggccagctc taccaggagc cgggcatcgc ggccttcggc aagacctact gcttcggtcc
      901 caccttccgc gccgagaaga gcaagacccg ccgccacctc acggagttct ggatggtgga
      961 gcccgaagtg gccttcgccc acctggatga cgtcatggcc ctgggcgagc gcatgaccaa
     1021 gttcctcatc cagcgggtgc tggagggccg ccaggaggag ctgaagatcc tggagcgcga
     1081 catcgcgccc ctggaaacgg ccctccacac caccttcgac cgcatgacct acaccgaggc
     1141 cgtggagaag ctcaagaccc tcggcagcga catcaactgg ggcgaggact tcggcaacga
     1201 cgacgagacc atcctcatga acgccacgga caagcccctg tgggtccatc gcttccccaa
     1261 ggccttcaag gccttctaca tggagcccga tcccctggat gcgcggctgg ccctgggcgc
     1321 cgacctgctg gccccggagg gctacggcga ggtcatcggc ggcggcgagc gcgccaccag
     1381 ccttccctac ctgctggagc agatcgccca ccacgagctg aaccgcgccg actacgagtg
     1441 gtccctggat gtccgcaagt acggcagcgt cccccacgcc ggctttggca tgggcctgga
     1501 gcgcgccgtg gcgtggatct gcaagctgcc gcatgtgcgc gagaccatcc cgtatccccg
     1561 aatgatgggt actttgaggc cctgacgaat gtccgttcca gcgtgcgggc tgcgcccgca
     1621 cgtatgaaaa ccgctgcgcg gttttcggcc aagagatcaa gctggcatga gtcgcggttg
     1681 tcgtttcgcg cggaacgcgc ctacgaaaat cgcgaagcga ttttcgccct cacagctgca
     1741 tgaccacgcc cggcagcttc tggatggcct cgcggagagg cgtctcggcc ttgtcgtcgg
     1801 gcagggtgac ccagaacgtg tagctgatga aggcgccctt gcagttggcc tggtgctgct
     1861 cgtcaccttc ggcctggggg cccaggtggg cgaggatcag cgccatgacc atgtcggggc
     1921 gcagttcctc ctggcgtccg atgatcttca tggggacgcg gaaggggtag gtgatgtcag
     1981 ggcggcggca ggcttccatg ccctccatct taccgtttga taggctggag ggtcggagga
     2041 ccgccgtgct ggatcgtctg aaggacctgg aagcgcagtc ccgcgggctg gatcccggcg
     2101 cggaggcgcg ggcccccatg tgggatgccg cccgggcata tggggaagcc ttcctccagg
     2161 ccctcccgga atccccggct ttcgtcctga aggaccatcc cggagcgggg ctgggggact
     2221 tccccattcc cgaggccgga cggcccctgg ccgggatcct ggacaccctt gccgcccagg
     2281 tggatggcgt gggggccaac ggggcctcgg gccgccacct ggccttcatc ccgccttcgt
     2341 cgctgtttgc gggggccctg ggggacctgc tgtcggccat caccaaccgc tacgccgcct
     2401 accatttcgc cgggcccggc gcggtgcgca tggagaacca ggtcctcggc tggctggccc
     2461 atgagatggg cctgcccgag ggcagctcgg gcaacctggc ctccgggggc agcatggccc
     2521 acctggtggg catctgcacg gcccgggaag ccgccggtct gaaggccgcg gactacggga
     2581 aggcctgcgt gtacctgtcg gaccaggccc accactgcat cgtgaaggcc ctccgggtgg
     2641 cgggcatggg cgaggccccc gtacggagca tccccacgga tgcgaatttc cggctgcgac
     2701 cggaggccct ggaggccgcc atccacgagg acctccgggc tgggctccgc ccctggctgc
     2761 tggtgcccac cgccggcacc accaacacgg gggccgtgga tcccctggaa gcctgcgccg
     2821 acctggcggc acgccacgga ctgtggatgc acacggacgg ggcctacggg gcctccttcg
     2881 ccctcacgga tctgggcaag gccgcgctcc ggggcctgga gcgcagcgac agcctggtgc
     2941 tggaccccca caaggggctg ttcacgtccc tggggctggg cgcggtgctg gtgcggcacc
     3001 tggatcccct gcggaaggcc catgccttcc aggcggacta cctgccctcg ccgccggagg
     3061 acctggagga gctgagtccc tcggaaacca ccctggaatt cagcaagcac gcccgggccc
     3121 tgcggctctg gctgcccctc cagctccacg gcgccgcggc cttccgggcg gccctggagg
     3181 agaagctcct gctggcgcgc tacgcccacg ggcggctttg cgagatgccg ggcgtggacc
     3241 cggggcccgt gccccagctc agcgtcctgg ccttccgcct ccagccccgg tcaggggatg
     3301 cggacgcctt caaccaggcc ctgctgcagc gcctcaccgc cgagggccgg gtcttcctca
     3361 gcggcacgaa gctgaacggc gccttccacc tgcgcctggc catcctcgcg gcgcggacgc
     3421 acaaggacga ggtggacgaa gccctggaac gcctccaggc cgcagccagg caactggcct
     3481 gatactccgg tcttttcgct cttccttctc tcaacgcgcc tgcgttgaga gccgggctag
     3541 gcgacctcga tctcccgcag atccttcccc ggcttgaagc ggatgctctt gcccttgggg
     3601 atctggacgc tggcgccggt cttgatgttc cggcccatgc cccgcttgcg ggggcggggc
     3661 tcgaacacgc cgaagccgcg gatctcgatg cggtggccgt tcaggagggc gtccttgaga
     3721 cgctcggtga ggaggtccac cacctggagg gcggtggccc gggagcacgg gtgcaccttc
     3781 atcaacgaat tggcgatgtc gatcttgatc atcagcgacc tcgggccagg gagtgggaga
     3841 gccagaatac gtggaagagc ggctagcggg ccagggtgat tttcacatcg ggggccgggg
     3901 gcatggccag gggcagcccg ggggcggggg gctggaccgc cgggggcggg gcgccgccgc
     3961 cttcccggcc cccaccctgg gcgatggaca tgctgcgctc catgttggcc ttggccatgt
     4021 cggaggaggc catgacgcct tcgagccgca gtttgaactc gcccacgttg gtggcgcgga
     4081 gcagggcctc ctcttcggtg atgaggccct gcttgagcag gaaatagagg ctctggtcga
     4141 aggtctgcat gccgtactgg gcggtgccct gggcgatgac atccttcagc atcttggtct
     4201 tgtccttgtc ctcgatgcag gtgcgcacgg tttccgtggc caccatgacc tccacggcgg
     4261 gcacgcggcc ctgcccgtcg gcgcggggca ccaggcgctg ggagatgatg cccttgagca
     4321 cggccgccag ctggagccgg atctgcttct ggtggtgggg cgggaacacg gagatgaccc
     4381 ggttgatggt ctcggtggcg tccagcgtgt gcagggtgct gaagaccagg tggcccgtct
     4441 cggcggcgtg cagggccgtc tcgatggtct ccaggtcgcg catctcgccc acgaggatca
     4501 cgtcgggatc ctggcggagg gcggcccgca gggcggagga gaaggtcttg cagtcggcct
     4561 ccacctcccg ctggttcacg atgctgaggt tgtcccggtg caggtactcg atgggatcct
     4621 cgatggtgag gatgtgctcg gtgcgggtgg cgttgatgag gtcgatcatg gccgccaggg
     4681 tggtggactt gcccgagccc gtggtgcccg tcaccagcac caggccgcgc tgctcttcgc
     4741 agatggtctt gaggaccctg gggagcatca ggtcgtcgat ggt
//
LOCUS       DASUDT010000386         3493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1277404, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000386 DASUDT010000000
VERSION     DASUDT010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3493
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277404"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..454)
                     /locus_tag="VFV26_07885"
     CDS             complement(194..454)
                     /locus_tag="VFV26_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846127.1"
                     /translation="MSQTIDRPELSPAEWKLIQDLRSLPDAALRDRMQTSIGELLFFF
                     RTPRCQGMGIDGFPCGDPRSSCEDCHQIWDMLDRVAERSKKV"
     gene            575..1387
                     /locus_tag="VFV26_07890"
     CDS             575..1387
                     /locus_tag="VFV26_07890"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HEX4846128.1"
                     /translation="MSLIHPFAAALAAVILWAPLAAQTQVVQPAKAEKATEVRTMPLA
                     AGSTLRVKNVNGFIRVEGWDREEVEFTGEFKPSSKDEQVKVVIEAGRGSLEIRGEYPK
                     NTGWGMYRGPQCQMTLKVPRRVMPTLESVNGEVALSGTQGAASLATVNGGVRATELSD
                     SLKATTVNGGITLAQVRGELVLETVNGAIKGTGLDGLGKGLKASTVNGSIHLQMAGIK
                     GRLKATTVNGGISFNAKGAEQVEVKKHRVTAVFPGGEQAIDLDTVNGAITLD"
     gene            1551..2048
                     /gene="nrfH"
                     /locus_tag="VFV26_07895"
     CDS             1551..2048
                     /gene="nrfH"
                     /locus_tag="VFV26_07895"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HEX4846129.1"
                     /translation="MSGKRRLFLLSILASVFVGVFLGSGAYTFVSAHGTSYLSNDPQV
                     CVNCHIMREEYDGWRHGSHKAVAVCNDCHLPHGNPVSKLYVKASNGYYHSKAFTLLNF
                     PEPIRIKPSNAKVLEDNCLRCHGELTGEITAHGTLGVPTDPMQKADLYGCVRCHQAVG
                     HGPTR"
     gene            2137..>3493
                     /locus_tag="VFV26_07900"
     CDS             2137..>3493
                     /locus_tag="VFV26_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HEX4846130.1"
                     /translation="MTDNPTPLLSRPMVRMGLIAAGAALATVLVMSLYASISSRKAEA
                     LQTSFKLVDLDEKTVDPAQWGKNFPRQYDAYQRTAEKYTTKYGGAGSEGMPKSRLEDD
                     PRLVTIFDGYAFAIDFNQRQGHAYMLDDQRKTKRVTERKQPGACLHCHASNTVAFREV
                     GLQGGAPGTLDEAFSSPNAQAQLMAGFEAVCKMPYAEATKLVKHPVACIDCHDPKNMA
                     LRVTKPGFIRGIVALANSAEPVPHLPSIEKWRKGDKTVAYDANRDASRQEMRSMVCGQ
                     CHVEYYCGPKTTLFFPWNKGMKVEQIEATYDEYKFPDGGRFFDWKHARTGAEVLKAQH
                     PEFEMWSQGIHARSGVSCSDCHMPYKREGALKISDHQVRSPLLDVTRACQSCHRFPEA
                     EIKARVTAIQDRTKALMDRAEDAVVALINDLEAAKKAGVDEAKLKPIYELQRKAQWRV
                     DF"
BASE COUNT          647 a         1221 c         1111 g          514 t
ORIGIN      
        1 ctgcggcagc cgatcgcgga aaacggccac gggactggcg cccacctggg cgagctggtg
       61 ggtgaagaag gcgctgatcc gcggccatgc cgagcggtcc tcctcgacca ccaggatccc
      121 gacgttcagc ctgcggctca tggtgccacc ctccgagctg ttcctcgtca gggttggtgg
      181 tgatcttgaa aattcagacc tttttggacc gctcggccac ccggtcgagc atgtcccaga
      241 tctggtggca gtcctcgcag gaagaacggg gatcgccgca ggggaagcca tcgatcccca
      301 tgccctggca gcggggggtg cggaagaaga acagcagctc gccgatggag gtctgcatgc
      361 ggtcgcgcag ggccgcgtcc ggcagggacc gcaggtcctg gatgagcttc cactcggcgg
      421 ggctgagctc gggacggtcg atggtctggg acatggggac tccgggcgcc ccaagtatac
      481 ggagttcccg gggggccctt ccggaagttc gctaaaccgc ctccgaaacc cttcgtatca
      541 ccgggcacga tctctgacat cgcaggaggc ttccatgtcc ctcatccatc cgttcgccgc
      601 ggccctggcc gccgtcatcc tatgggcgcc gctcgccgcc cagacccagg tggtccagcc
      661 cgccaaggcg gaaaaggcca ccgaggtccg caccatgccg ctggcggcgg gatcgacgct
      721 ccgggtgaag aatgtcaacg gcttcatccg cgtggagggc tgggaccgcg aggaggtcga
      781 gttcacgggc gagttcaagc ccagcagcaa ggacgagcag gtgaaggtcg tcatcgaagc
      841 gggcaggggg agcctggaga tccggggcga gtaccccaag aacacgggct ggggcatgta
      901 ccgggggccc cagtgccaga tgaccctcaa ggtgccccgc cgggtgatgc ccaccctgga
      961 aagcgtgaac ggcgaagtgg ccctcagcgg cacccagggc gccgccagcc tggccaccgt
     1021 caacggcggc gtgcgcgcca cggagctttc ggactccctg aaggccacca cggtgaatgg
     1081 cggcatcacg ctggcgcagg tgcgcgggga gctggtcctc gagaccgtga atggcgccat
     1141 caagggcacg ggcctggatg gcctggggaa ggggctcaag gcttcgaccg tcaatggctc
     1201 catccacctg cagatggcgg ggatcaaggg ccggctcaag gccaccacgg tcaacggcgg
     1261 catctccttc aacgccaagg gggctgagca ggtggaggtg aagaagcacc gggtcacggc
     1321 cgtcttcccc ggaggggagc aggccatcga tctggacacc gtgaacggcg cgatcaccct
     1381 ggactgagag accccgattc catggaaagg gccggtacca ccggcccttt cccgtgcccg
     1441 ggaattgaat gcgaatgcag ggtcttttga tatcggattg acaggtccga tttttattgc
     1501 atcctgttcc ggtgcggggg cggacccccg gacaaccgga tggatacccc gtgagcggaa
     1561 agcgtcgact gttcctgttg agcatcctgg ccagcgtctt cgtgggcgtg ttcctggggt
     1621 ccggggccta caccttcgtc tcggcccatg gcacctcgta cctgtccaac gacccccagg
     1681 tctgcgtgaa ctgccacatc atgcgcgagg agtacgacgg ctggcgccac gggtcccaca
     1741 aggccgtggc cgtgtgcaac gactgccacc tgccccacgg caacccggtc agcaagctct
     1801 acgtcaaggc cagcaacggc tactaccact ccaaggcctt cacgctcctg aacttccccg
     1861 agcccatccg catcaagccc tccaacgcca aagtgctgga ggacaactgc ctccggtgcc
     1921 acggggagct gacgggtgag atcaccgccc acggcaccct gggcgtcccc acggacccca
     1981 tgcagaaggc ggacctctac gggtgcgtcc gctgccacca ggcggtgggc cacgggccca
     2041 cgcgctgatc caccccgtca cccttcgatc ccatgacgcc caccccctga tccccaccct
     2101 ttgacgcgtg gaattccacg cgggaggtcc cttccgatga ccgacaaccc cactccgctt
     2161 ctctcccgtc cgatggtccg gatgggcctc atcgccgccg gcgccgccct ggccacggtg
     2221 ctggtgatgt ccctctacgc cagcatctcc agccgcaagg ccgaggccct gcagaccagc
     2281 ttcaagctgg tggacctgga tgagaagacc gtcgatcccg cccagtgggg gaagaacttc
     2341 ccccgccagt acgacgccta ccagcgcacc gccgagaagt acaccaccaa gtacggcggg
     2401 gcgggcagcg agggcatgcc caagagccgg ctggaggacg atccacgcct ggtgacgatc
     2461 ttcgacggct acgccttcgc catcgacttc aaccagcgcc agggccacgc ctacatgctg
     2521 gacgaccagc ggaagaccaa gcgcgtcacc gaacgcaagc agcccggcgc ctgcctccac
     2581 tgccacgcgt ccaacaccgt ggccttccgg gaagtgggcc tgcagggcgg cgcgcccggc
     2641 accctcgacg aggccttcag cagccccaat gcccaggctc agctgatggc gggcttcgag
     2701 gccgtctgca agatgcccta tgccgaagcc accaagctcg tgaagcaccc cgtggcctgc
     2761 atcgattgcc acgatcccaa gaacatggcc ctgcgcgtca ccaagcccgg cttcatccgc
     2821 ggcatcgtgg ccctggccaa cagcgccgag cccgtgccgc acctgccctc catcgagaag
     2881 tggcgcaagg gcgacaagac cgtggcctat gacgccaacc gcgacgcctc ccgccaggag
     2941 atgcgctcca tggtctgcgg ccagtgccac gtggagtact actgcgggcc caagaccacc
     3001 ctcttcttcc cctggaacaa gggcatgaag gtcgagcaga tcgaagccac ctacgacgag
     3061 tacaagttcc cggacggcgg ccgcttcttc gactggaagc acgcccggac cggcgccgag
     3121 gtcctcaagg cccagcaccc cgagttcgag atgtggagcc agggcatcca cgcccgctcc
     3181 ggtgtctcct gctccgactg ccacatgccc tacaagcgcg agggggccct caagatcagc
     3241 gaccaccagg tccgcagccc cctgctcgat gtcacccgtg cctgccagag ctgccaccgc
     3301 ttccccgaag cggagatcaa ggcccgggtc acggccatcc aggaccgcac caaggccctc
     3361 atggaccggg ccgaggacgc ggtggtcgcc ttgatcaacg atctcgaggc cgccaagaag
     3421 gctggcgtgg acgaggccaa gctgaagccc atctacgagc tccagcggaa ggcccagtgg
     3481 cgcgtggact tcg
//
LOCUS       DASUDT010000387         3012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1012250, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000387 DASUDT010000000
VERSION     DASUDT010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012250"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1653
                     /locus_tag="VFV26_07905"
     CDS             <1..1653
                     /locus_tag="VFV26_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX4846131.1"
                     /translation="PSNIAGLPTWFTIRASAKGYVARKASNEMLILMNPETAKEDIAK
                     ADPGALVIYDEPLQLDKLRSDLAFTPVPFQKLVTASCPEPKLHKLVKNMIYVGVAARL
                     LGIDMEEVKKAIAKQLKGKAKAIELNQTACTAGYDWAMENLEDQDHIKVIRDNKTQGL
                     IIVDGNEACALGALFAGVTVVGWYPITPASSLVETFIEYAEEYRKDPKTGKSTVAIVQ
                     MEDELASAGVVLSAGWAGARSMTSTAGPGVSLMSEFIGLGYYVEAPGVFFNVARTGPS
                     TGLPTRTQQSDVELCAKCSHGDTQHINLYPGNMEECFQFSYDAFDLAERFQTPIFVVT
                     DLDLGMQNWSSKPFAYPAKPYDRGKVLNEQQLAEVKDWGRYKDVDGDGICYRTLPGTP
                     GGRGSYFTRGSGHNAYAQYSEKPEDYIAVMERLKKKYEVSKSYVPGPISRNLGSGKGI
                     LAFGSSDPAVIEAQDLLAELGLKTDYLRLRALPFTAEVDAFVEAKQVVYVVEQNRDGQ
                     MANLFRETYPGHATKFKSVLHYDGHAIDAKCIVDQITAFEQK"
     gene            1664..2716
                     /locus_tag="VFV26_07910"
     CDS             1664..2716
                     /locus_tag="VFV26_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEX4846132.1"
                     /translation="MTTATPSAPVPAAPTNKLGFTKQDYVGSKSTLCACCGHDAITAQ
                     IINAAFESSIEGYRVTKYSGIGCSSKTPAYFMNQGWGFNSVHGRMPSIATGASLANRN
                     LINIGVSGDGDSMSIGMGQFVHAVRRNIPMIYIIEDNGVYGLTKGQFSATADKGSHLK
                     SGAVNDLPPIDPCTLAIELGCGFVARCFSGNPKQLNAVLKAAFAYEGTVVLDIISPCV
                     TFNNHDASTRSYKHVKDHDFPLHDLGFIQYSEVEDVEIPAGETEVVTFPDGSKVAIKA
                     IHETYDPTDRFGAMKAIHESMAKGEFLTGLLYINPTQPPLPQVLNLVDEPLATLDESV
                     LKPSPAELDKIMQSLM"
     gene            2816..2891
                     /locus_tag="VFV26_07915"
     tRNA            2816..2891
                     /locus_tag="VFV26_07915"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2849..2851,aa:Ala,seq:cgc)
BASE COUNT          590 a         1088 c          859 g          475 t
ORIGIN      
        1 ccctcgaaca tcgccggtct gcccacctgg ttcaccatcc gggccagcgc caagggctac
       61 gtggcccgca aggccagcaa cgagatgctg atcctcatga accccgagac ggccaaggag
      121 gacatcgcca aggccgaccc cggcgccctg gtgatctacg acgagcccct gcagctcgac
      181 aagctgcgca gcgatctcgc cttcacgccc gtccccttcc agaagctcgt gactgcctcc
      241 tgccccgagc ccaagctgca caagctcgtg aagaacatga tctacgtggg cgtggcggcc
      301 cgcctgctcg gcatcgacat ggaggaggtc aagaaggcca tcgccaagca gctgaagggc
      361 aaggccaagg ccatcgaact gaaccagacg gcctgcacgg ccggctacga ctgggccatg
      421 gagaacctcg aggaccagga ccacatcaag gtcatccgcg acaacaagac ccagggactc
      481 atcatcgtgg acggcaacga ggcctgcgcc ctgggcgccc tcttcgccgg tgtcaccgtg
      541 gtgggctggt atcccatcac cccagcatcg agcctggtcg agaccttcat cgaatacgcg
      601 gaggagtacc gcaaggatcc caagaccggc aagtccaccg tggccatcgt gcagatggag
      661 gacgagctcg cttccgcggg cgtggtgctg tcggctggct gggcgggcgc ccggtccatg
      721 acctccacgg cgggccccgg tgtctcgctc atgagcgaat tcatcggcct gggctactac
      781 gtggaggcac ccggcgtctt cttcaacgtg gcccgcacgg gccccagcac gggcctcccc
      841 acgcgcaccc agcaatccga cgtggagctt tgcgccaagt gcagccacgg cgacactcag
      901 cacatcaacc tgtaccccgg gaacatggag gagtgcttcc agttctccta tgacgccttc
      961 gacctggccg agcggttcca gactcccatc ttcgtcgtca ccgacctgga cctgggcatg
     1021 cagaactggt cctccaagcc cttcgcctac cccgccaagc cctatgaccg cggcaaggtg
     1081 ctgaacgagc agcagctggc cgaagtgaag gactggggcc gctacaagga tgtggatggt
     1141 gatggcatct gctaccgcac cctgcccggg acgcccggcg gcaggggttc ctacttcacc
     1201 cgcggctcgg gccacaacgc ctacgcccag tactccgaaa agcccgagga ctacatcgcc
     1261 gtgatggagc gcctgaagaa gaaatacgag gtctccaagt cctacgtgcc cggccccatc
     1321 tcccgcaatc tcggctcggg caagggcatc ctcgccttcg gctccagcga tccggccgtc
     1381 atcgaggccc aggacctcct ggccgagctc ggcctcaaga ccgactacct gcgcctgcgc
     1441 gccctgccct tcacggccga ggtcgacgcc ttcgtggagg cgaagcaggt ggtctacgtg
     1501 gtcgagcaga accgcgacgg gcagatggcc aacctcttcc gcgagaccta tcccgggcac
     1561 gccaccaagt tcaagagcgt cctccactac gatggccacg ccatcgatgc caagtgcatc
     1621 gtggaccaga tcaccgcctt cgagcagaag taaggagccg accatgacca ccgccacccc
     1681 ttccgctccc gttcccgccg ctcccaccaa caagctcggc ttcaccaagc aggactacgt
     1741 gggctccaag tccacgctct gcgcctgctg cggccacgat gccatcacgg cccagatcat
     1801 caatgccgcc ttcgaatcca gcatcgaggg ctaccgggtc accaagtact ccggcatcgg
     1861 ctgctcctcg aaaacccccg cctatttcat gaaccagggc tggggcttca acagcgtgca
     1921 tggccgcatg ccctccatcg ccacgggcgc ctccctggcc aaccggaacc tcatcaacat
     1981 cggcgtgtcc ggcgacggcg attccatgtc catcggcatg gggcagttcg tccacgccgt
     2041 gcgccgcaac atccccatga tctacatcat cgaggacaac ggggtctacg gcctcaccaa
     2101 gggccagttc tccgccaccg ccgacaaggg ctcccacctc aagtccggcg cggtgaacga
     2161 cctgcccccc atcgatccct gcaccctggc catcgagctg ggctgcggtt tcgtggcccg
     2221 ctgcttctcc ggcaacccca agcagctgaa cgccgtgctc aaggccgcct tcgcgtacga
     2281 aggcaccgtg gtgctcgaca tcatcagccc ctgcgtcacc ttcaacaacc acgacgcctc
     2341 gacccggtcc tacaagcacg tcaaggacca cgacttcccc cttcacgacc tgggcttcat
     2401 ccagtattcc gaggtcgagg atgtggagat ccccgcgggc gaaaccgagg tcgtaacctt
     2461 cccggacggt tccaaggtcg ccatcaaggc catccacgag acctacgatc ccacggaccg
     2521 cttcggcgcc atgaaggcca tccacgagtc catggccaag ggcgagttcc tcacgggcct
     2581 gctctacatc aaccccaccc agccccccct cccccaggtg ctcaacctgg tggacgagcc
     2641 cctggccacc ctggatgaga gtgtgctcaa gcccagcccc gccgagctgg acaagatcat
     2701 gcagagcctc atgtaaggaa ccatcgctcg atcaggcggc cgcccttgcg ggcagccgta
     2761 tggggcaagc ctgaggattg acgaggatcc ttgggcgggt agactggaga ttcgtgggcc
     2821 tgtagctcag ctgggagagc gctgcgttcg caatgcagag gtcgtcagtt cgatcctgat
     2881 caggtccacc agcaaaaagc cccctgagac atcagggggc tttttgctgg tgcctggaac
     2941 tcagaacacc acttccatgg gggccgtttc gcccgccaaa agggccacgg cctgggcggc
     3001 caccaggggc ag
//
LOCUS       DASUDT010000388         4983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_946034, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000388 DASUDT010000000
VERSION     DASUDT010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946034"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /gene="arsM"
                     /locus_tag="VFV26_07920"
     CDS             complement(<1..669)
                     /gene="arsM"
                     /locus_tag="VFV26_07920"
                     /inference="COORDINATES: protein motif:HMM:NF008823.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HEX4846133.1"
                     /translation="MEPETLKSAVRDRYAGFVKNNQSCCGPSTSCGCAPGDASLDLGY
                     DPKDLAAVPEGANLGLGCGNPVALAALKPGEIVLDLGSGAGFDAFLAAQRVGPEGRVL
                     GVDMTPEMIERATALARKHGYGNVEFRLGDIEALPVEDASMDVILSNCVVNLTTDKEK
                     AFREAFRVLKPGGRLQVSDLVLARPLPEALLEDMDAYAACISGAMLKDDYLAAIRSAG
                     FAGVT"
     gene            complement(737..1072)
                     /locus_tag="VFV26_07925"
     CDS             complement(737..1072)
                     /locus_tag="VFV26_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4846134.1"
                     /translation="MTGRVEQAAERLKALGHPVRLSILRRLVQGPEAGTPAGELQSRL
                     DIPASTLSHHLATLADAGLVRVAREGTTLRYRADYGTLRALTAYLWQDCCAGGAADDS
                     QPSPCCRRD"
     gene            complement(1144..1563)
                     /locus_tag="VFV26_07930"
     CDS             complement(1144..1563)
                     /locus_tag="VFV26_07930"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEX4846135.1"
                     /translation="MTSILFLCVANSARSQLAEGLARRMFPGFRIQSAGSRPSRVNPC
                     AIEALAERGIDASTHASKPVSDIDPATVDLVITLCAEEVCPAFLGRAERLHWPIPDPA
                     SDDPALTPEDLRARFRAARDEIARRLEALGRDRGWIA"
     gene            complement(1691..2173)
                     /locus_tag="VFV26_07935"
     CDS             complement(1691..2173)
                     /locus_tag="VFV26_07935"
                     /inference="COORDINATES: protein motif:HMM:NF040504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsinothricin resistance N-acetyltransferase
                     ArsN1 family B"
                     /protein_id="HEX4846136.1"
                     /translation="MIRPVTCADAPALAAIYNPYIRDTTITFEEDPVTAEEMAARIAK
                     VTEGYPWLVWEEQGRVLGYAYSSVWRARAAYRHSTETAIYLALDQRQKGAGTRLYRAL
                     LDELRARGFHLVLGGLALPNEPSVRLHERLGFRKAGHMREAGRKFGRWIDVGFWELLL
                     "
     gene            complement(2178..3272)
                     /gene="arsB"
                     /locus_tag="VFV26_07940"
     CDS             complement(2178..3272)
                     /gene="arsB"
                     /locus_tag="VFV26_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HEX4846137.1"
                     /translation="MSRGRLSFLDRYLTLWIFLAMGFGVLLGFAVPGFNRAINAWNVG
                     TTSLPLAAGLILMMYPPLAKVKYEELHLVFQNRKVLGLSLLQNWIIGPLLMFGLAVLF
                     LRDKPEYMIGLILIGLARCIAMVIVWNDLAKGDTEYCAGLVAFNSIFQVLFFSVYAWF
                     FATVLPAKLGLQGAVVAITIGQIAKSVFIYLGIPFIAGFLTRFILGKLKGLDWYHRVF
                     VPKISPLTLVALLFTIVVMFSLKGDTIVKLPLDVIRIAIPLLIYFVVMFLVSFWLSKK
                     AGATYPQSATLSFTAASNNFELAIAVAVATFGIAHGAAFAAVIGPLVEVPALIGLVSV
                     ALWLKRKWYPEAPEDVAAAGCCPAVDPAKR"
     gene            complement(3302..3631)
                     /locus_tag="VFV26_07945"
     CDS             complement(3302..3631)
                     /locus_tag="VFV26_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846138.1"
                     /translation="MTTQPETATESGLSETTLNLIALGAAVGSNAERAFRAHQSRLEA
                     LGVSKEDMIEAVNMALRVKGDPHSQIMALAQTTLVGEGGGCCGGACACEEAGGQKGDC
                     GDDCDCK"
     gene            complement(3628..4017)
                     /locus_tag="VFV26_07950"
     CDS             complement(3628..4017)
                     /locus_tag="VFV26_07950"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4846139.1"
                     /translation="MTSDPLRPLVDTLKALAHPVRLRILALLHAGELCVCEVAEVLGL
                     APSTVSEHLTGLRRAGLVREWKVGRWVHVALSDEASARPLLEALWPLMAGAEAELSRD
                     RAQARALRCDPCDPVACPPSRTLKEHA"
     gene            4121..>4983
                     /locus_tag="VFV26_07955"
     CDS             4121..>4983
                     /locus_tag="VFV26_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846140.1"
                     /translation="MPRIPAALLSLALAALLQAQAPFPAATPAPSPVPVMREYPDTPA
                     GKLLREIKERAEVVARVEYLCDVIGPRLTGSDSLRRAQAWAMAEMKKLGAVNVHEEAY
                     DFGLAWTRGVDSARLLTHNGIRFRVDQAAWTMGTKGAVKGDLLLVDARNLEELKAFKG
                     QLKGRILLRTNPDDKRPPLDRRGRDMEAYQTEQAAMTQFLLDEGVLALLQMSGRKNGL
                     GFASGGPGRDPRRLSLPSATVPQEPYRMLVRLLARKEPVKLELSLGGSFSAAPVQAHN
                     VVGEIPGREKPG"
BASE COUNT          804 a         1640 c         1781 g          758 t
ORIGIN      
        1 ggtcacgccc gcaaaacccg cgctgcggat ggcggccagg tagtcgtcct tcagcatggc
       61 gccggagatg caggcggcgt aggcatccat gtcctcgagc agggcctcgg gcaggggccg
      121 ggccagcacc aggtcggaca cctggaggcg cccgccgggc ttcagcacgc ggaaggcctc
      181 gcggaaggcc ttctccttgt ccgtggtgag gttcaccacg cagttggaga ggatgacgtc
      241 catgctggcg tcttccacgg gcagggcctc gatgtcgccc aggcggaatt ccacgttccc
      301 gtagccgtgt ttccgggcca gggcggtggc gcgttcgatc atctccggcg tcatgtccac
      361 gccgaggacg cggccttcgg gtcccacgcg ctgggcggcg aggaaggcgt cgaagcccgc
      421 gccggagccc aggtccagca cgatctcgcc gggcttcagc gcggccaggg ccacggggtt
      481 gccgcagccc aggcccaggt tggcgccttc gggcacggcg gcgaggtcct tcgggtcgta
      541 gcccaggtcc aggctggcgt cgccgggggc gcagccgcag gaggtggatg gaccacagca
      601 actttgattg ttcttcacga agccggcata gcggtcacgg acggcggatt tgagggtttc
      661 gggttccatg gcggggcctt tcggatggag gtttcccggg acaccagagg catccagatc
      721 ccaggaggat ggaaggtcag tccctgcggc agcagggcga aggttgggag tcgtccgccg
      781 cgccgccggc gcagcagtcc tgccagaggt atgcggtcag cgcccgcagc gtgccgtagt
      841 cggcgcggta gcggagcgtg gtgccttccc gggccacccg caccaggccg gcgtcggcga
      901 gggtggccag gtgatggctg agggtggagg ccgggatgtc caggcgcgac tgcagctctc
      961 cggcgggcgt ccccgcctcg gggccctgca ccaggcggcg caggatggac aggcggacgg
     1021 ggtgtccgag ggccttcagc cgctctgccg cctgttccac acgcccggtc atggtctcct
     1081 cctggtttaa ttctaaaatt gtcgaaataa catgcaaggc ctaatttcga tttttttcga
     1141 aattcatgcg atccagcccc ggtcgcggcc cagcgcctcc aggcggcggg cgatctcgtc
     1201 cctcgcagcg cggaagcggg cccgcagatc ctcgggcgtg agcgcggggt cgtcgctggc
     1261 gggatcgggg atgggccagt gcagccgctc ggccctgccc aggaaggcgg ggcagacctc
     1321 ctcggcgcag agggtgatga ccaggtccac cgtggccggg tcgatgtccg acacgggctt
     1381 cgaggcatgc gtcgaggcgt cgatgccccg ctctgccagg gcctcgatgg cacaggggtt
     1441 cacgcggctg ggccggctgc cggcgctctg gatgcggaag cccgggaaca tccggcgcgc
     1501 caggccctcg gccaactggg accgggcgct gttggccacg cagagaaaca ggatcgaggt
     1561 catggatgct ccgttcgcct caagaaagga ctcaccacca aggcaccaag acaccaagta
     1621 aagacaaagg ccgttcttgg tgtcttggtg ccttggtggt gttcattttc ttgttcagcg
     1681 tgagtgccat tcacaggagc agctcccaga agcccacgtc gatccagcgg ccgaacttcc
     1741 gcccggcctc gcgcatgtgg cccgccttgc ggaagcccag gcgctcgtgg agccgcacgc
     1801 tgggctcgtt gggcagggcc agtccgccca ggaccaggtg gaagccccgc gcgcgcagct
     1861 cgtccagcag ggctcggtag agccgggttc cggcgccctt ctgccgctgg tccagggcca
     1921 ggtagatggc ggtctccgtc gagtggcggt aggcggcccg ggcccgccag accgagctgt
     1981 aggcgtagcc gagcacgcgg ccctgctctt cccagaccag ccagggatag ccttccgtca
     2041 ccttggcgat gcgggcggcc atctcctccg ccgtcaccgg gtcttcctcg aaggtgatgg
     2101 tcgtgtcccg gatgtagggg ttgtagatgg cggccagggc cggggcatcg gcgcacgtca
     2161 cggggcggat catcggctca cctcttggcg gggtccaccg cgggacagca gccggcagcg
     2221 gcgacgtcct ccggggcctc ggggtaccac ttccgcttca gccagagggc cacgctgacg
     2281 aggccgatga gggcgggcac ctccaccagc ggcccgatga cggcggcaaa ggccgcgccg
     2341 tgggcgatgc cgaaggtggc cacggccacg gcgatggcca gctcgaagtt gttgctggcc
     2401 gccgtgaagc tcagcgtggc gctctggggg taggtggccc cggccttctt ggacagccag
     2461 aagctcacca ggaacatcac cacgaaatag atcagcagcg ggatggcgat gcggatgaca
     2521 tccaggggca gcttcacgat ggtgtcgccc ttgaggctga acatcaccac gatggtgaag
     2581 agcagcgcca caagcgtcag cgggctgatc ttcggcacga agacccggtg gtaccagtcc
     2641 agccccttga gcttcccgag gatgaaccgc gtgaggaagc ccgcgatgaa gggaatgccc
     2701 agatagatga agacgctttt cgcgatctgg ccgatggtga tggccaccac cgcgccctgg
     2761 aggcccagct tcgcgggcag caccgtggcg aagaaccagg cgtacacgct gaagaagagc
     2821 acctggaaga tggagttgaa ggccaccagc cccgcgcagt attccgtatc gcccttggcc
     2881 aggtcgttcc acacgatgac catggcgatg cagcgggcca ggccgatgag gatgagaccg
     2941 atcatgtact ccggcttgtc ccgcaggaac agcacggcca gcccgaacat gagcaggggc
     3001 ccgatgatcc agttctggag cagggacagg cccagcacct ttctgttctg gaagaccagg
     3061 tgcagctcct cgtacttcac cttggccagg ggcggataca tcatcaggat caggcccgcg
     3121 gccaggggca ggctggtggt gcccacgttc caggcgttga tggcgcggtt gaagccgggc
     3181 acggcgaagc ccagcagcac gccgaacccc atggccagga agatccacag ggtcaggtac
     3241 cggtccagga aagacagccg acctctggac atgatggcct ccgaagttct atcgcagtcg
     3301 tctacttgca gtcgcagtcg tcgccgcagt cgcccttctg gccgcccgcc tcttcgcagg
     3361 cgcaggcgcc gccgcagcag ccgccgccct cgcccaccag ggtggtctgg gccagggcca
     3421 tgatctggga gtggggatcg cccttcaccc gcagggccat gttcacagcc tcgatcatgt
     3481 cctccttgga gacacccagc gcttccaggc ggctctggtg ggcgcggaag gcccgctcgg
     3541 cgttggagcc gacggcggcg cccagggcga tgaggttgag ggtggtctcg ctgaggccgg
     3601 attcggtggc ggtctcgggc tgggtggtca tgcatgctcc ttgagggtgc gtgaaggggg
     3661 acaggcgacg ggatcgcagg ggtcgcagcg cagggcgcgg gcctgggcgc ggtcgcggga
     3721 cagctcggct tcggcaccgg ccatgagggg ccagagggcc tccagcaggg ggcgggcgga
     3781 agcctcgtcg gagagggcca cgtgcaccca gcggcccacc ttccactcgc gcaccagccc
     3841 cgcccggcgc aggcccgtga ggtgctcgga cacggtggag ggcgccagcc ccagcacctc
     3901 ggccacctcg cagacgcaga gctcgcccgc gtggagcagg gccaggatgc gcaggcgcac
     3961 ggggtgggcc agggctttga gggtgtccac gaggggacgg agggggtccg aagtcatttc
     4021 gctatttccc gaaacatcgt cagcatatct gccctttcgg cccttgccat acctcgcatt
     4081 ttgatatttg ctgaaaccag ccttccccac aggagttccc atgccgcgga tccccgccgc
     4141 cctgctgtcg ctggccctgg ccgccctcct ccaggcccag gcccccttcc cggcggcgac
     4201 ccccgccccc tcgccggtgc cggtgatgcg ggagtatccg gacaccccgg cgggaaagct
     4261 tctccgggag atcaaggaac gcgcagaggt ggtggcccgc gtggaatacc tgtgcgatgt
     4321 gatcggcccc cgcctcacgg gctccgattc gctgcgccgg gcccaggcct gggccatggc
     4381 cgagatgaag aagctcgggg cggtgaacgt ccacgaagag gcctacgact tcggcctggc
     4441 ctggacccgc ggggtggaca gcgcccgcct gctcacccac aacggcatcc ggttccgggt
     4501 ggaccaggcg gcctggacca tgggcaccaa gggcgccgtg aagggcgacc tgctgctggt
     4561 ggacgcccgg aacctggagg agctgaaggc cttcaagggc cagttgaagg gccggatcct
     4621 gctgcgcacc aaccccgacg acaagcgccc gcccctggac cgccggggcc gggacatgga
     4681 ggcctaccag acggaacagg cggccatgac ccagttcctc ctggacgagg gcgtcctggc
     4741 cctgctgcag atgtcgggcc gcaagaatgg actcggcttc gccagcggcg ggcccggccg
     4801 ggatcccagg cgcctgagcc tcccgtccgc cacggttccc caggagccct acaggatgct
     4861 ggtgcgcctg ctggcgcgga aggagcccgt gaagctcgag ctgtccctgg gcggcagctt
     4921 ctccgcggcc ccggtccagg cccacaacgt ggtgggcgag atccccgggc gggagaagcc
     4981 cgg
//
LOCUS       DASUDT010000389         2589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_150533, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000389 DASUDT010000000
VERSION     DASUDT010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150533"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1105)
                     /locus_tag="VFV26_07960"
     CDS             complement(62..1105)
                     /locus_tag="VFV26_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846141.1"
                     /translation="MRAHLRFLILDGFDPDTGELALRVAFQAGPEPGLDLIRLHLHLG
                     RSGNPLDPLSRELRTHVQMPVPPLWEHGLRTCIHAIEEELAGPEGRSALRYLWVRTQL
                     LHPAEAAKSTPNHPVARQVEILRDWANRLDQDGQPLRAAEILERLLLLAPKDVASLAY
                     LASFFRAQGMAEEMAAVAERWTKAEPGRQEARLRHGEALLRLGRAQEARAAFEAVLKA
                     QPVHLLGHLGMAQALGLMGGNPFPHLDAAQELDPGATASVLRETFSYRLLAPPAGDRV
                     HPLDGLPALLGVSGAEVQDYLQFLGLPLTGPEGTVRESELARWAGVMNRYALLPGGLH
                     WSAPTPRHLPELA"
     gene            1230..1826
                     /locus_tag="VFV26_07965"
     CDS             1230..1826
                     /locus_tag="VFV26_07965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846142.1"
                     /translation="MRKKLFALSALVAMATIPASAGEVGLLVDKQFGKAQTAAFGLGQ
                     KYDAVSPTGFGIRGGFDVLDLKVAALQMNATWHNKTKGDLTYGGTKYGELENQYWAVG
                     AMVNWKLLVNVGAGVEYRSESLTWRPTSGSTTEGTLGRPWARVNVGFSIPTPIVSPFF
                     TVEVAAPLSKKDTTATYKDLTEAMAPQVQVGIYGGIRF"
     gene            1904..>2589
                     /locus_tag="VFV26_07970"
     CDS             1904..>2589
                     /locus_tag="VFV26_07970"
                     /EC_number="3.1.4.17"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004114 - 3',5'-cyclic-nucleotide
                     phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HEX4846143.1"
                     /translation="MELRILGCSGGEADGERLTGLLVNGCVAIDAGSITAALTVAEQV
                     AIQHVFLSHSHLDHICTLPFFTKNIFGHTHEAVEIHALPETLDVLRRHLFNDELWPDF
                     SVIPSPNDPTIRYTEIEPGRSYHVCGLHITPIRVNHLVPCVGYKVDDGTDAFIFTSDT
                     AETDQIWEVANATPNLRMVITEASFPNEQAWLAEASKHLTPAKLGVELKKLKRDVPVR
                     IYHLTPGDKAT"
BASE COUNT          449 a          891 c          845 g          404 t
ORIGIN      
        1 ccggaatcca aacatccatc atcgcagaca atggggatcc catcagctgc cggacggggc
       61 cctaggccag ttccggcagg tgcctcgggg tgggggcgga ccagtggagg ccccccggaa
      121 gcagcgcgta gcggttcatg actcccgccc agcgggccag ttcggattcg cgcaccgtgc
      181 cctcggggcc agtgaggggc aggccgagaa actggaggta gtcctggacc tcggccccag
      241 atacgcccag cagggcgggc agcccatcca gcgggtggac acggtccccc gctggcggcg
      301 ccagcaatcg gtagctgaag gtctcccgca gcaccgaagc cgtggccccg ggatccagtt
      361 cctgggcggc atccaggtgg ggaaaggggt tcccccccat caggcccagg gcctgggcca
      421 tgccgagatg gcccaacaga tggacaggct gggccttgag caccgcctcg aaggccgccc
      481 gggcctcctg ggcccggccc agccgcagca gggcctcgcc gtggcgcagc cgcgcctcct
      541 ggcgccccgg ttcggccttg gtccagcgct cggccaccgc cgccatctcc tccgccatgc
      601 cctgggcccg gaagaagctg gccaggtacg cgagactcgc cacatccttg ggtgccagca
      661 gcagcaggcg ctccaggatc tcggcagcac ggaggggctg gccgtcctgg tccagccggt
      721 tcgcccagtc ccgcaggatc tccacctgcc gggccacggg atggttcggc gtggacttcg
      781 ccgcctcggc agggtggagc agctgagtcc ggacccacag gtagcggagg gcgctgcggc
      841 cctcgggacc ggccagttcc tcctcgatgg cgtggatgca ggtccggagg ccgtgctccc
      901 atagcggcgg caccggcatc tgcacatggg tcctcagttc gcggctgagg gggtccagcg
      961 gattgccgga ccggcccagg tggaggtgca ggcggatcag atccaggccc ggctccgggc
     1021 cagcctggaa ggccacccgc agggccagct cccccgtgtc ggggtcgaag ccgtccagga
     1081 tcaggaagcg aaggtgggcc cgcatgacgt gagattaaca agaccccggc agaagggggt
     1141 cgccatggga tttggtcgca acctctgaat gaaggttgac cgcgcccctt cctgggccga
     1201 tgatgcccta tctgccaatt ggaggctcta tgcgcaaaaa gctgttcgct ctttccgccc
     1261 tggtggccat ggccaccatt ccggcttcgg ccggcgaggt gggtcttctc gtcgacaagc
     1321 agttcggcaa ggcgcagacc gccgctttcg gcctcggcca gaagtacgat gccgtgagcc
     1381 ccacgggctt cggcatccgg ggtggtttcg atgtcctgga tctcaaggtg gccgccctcc
     1441 agatgaatgc cacctggcac aacaagacca agggcgacct cacctatggc ggaaccaagt
     1501 acggcgagct ggagaaccag tactgggccg tgggggccat ggtgaactgg aagctgctcg
     1561 tgaacgtggg tgccggcgtg gaataccgtt ctgagagcct cacgtggcgc cccaccagcg
     1621 gctccaccac cgagggcacc ctgggccgcc cctgggcccg ggtgaacgtg ggcttcagca
     1681 tccccacgcc catcgtgagc cccttcttca ccgtcgaagt ggccgccccc ctctccaaga
     1741 aggacaccac cgccacctac aaggatctga ccgaggccat ggcgccccag gtccaggtgg
     1801 gcatctatgg cggcatccgg ttctagtgtt tgtcccctct gcgaaaaagg ggcgcctccg
     1861 gtgccccttt ttcgtatgat gagtccactt ataccgaggg acgatggaac tccggatcct
     1921 gggttgcagc ggcggggagg ccgatggcga gcgcctcacg gggctgcttg tgaacggctg
     1981 cgtggccatc gacgccggtt ccatcacggc ggccctgacg gtggcggaac aggtggccat
     2041 ccagcatgtg ttcctcagcc actcgcacct ggaccatatc tgcaccctgc ccttcttcac
     2101 caagaacatc ttcggccata cccatgaggc ggtggagatc catgccctgc ccgagaccct
     2161 ggacgtgctg cgccgccacc tcttcaacga cgagctgtgg cccgatttca gcgtgattcc
     2221 cagccccaac gaccccacca tccgctacac ggagattgaa cccgggcgct cgtaccacgt
     2281 ctgcggcttg cacatcacgc ccatccgcgt gaaccacctg gtgccctgcg tgggctacaa
     2341 ggtggatgac gggacggacg ccttcatctt caccagcgat accgccgaga cggaccaaat
     2401 ctgggaagtg gccaacgcca ccccgaacct gcggatggtc atcacggagg ccagctttcc
     2461 caacgaacag gcctggctgg cagaggcctc caagcacctc acacccgcga agctgggcgt
     2521 ggagctgaag aagctcaagc gggatgtgcc ggtgcggatc taccacctca cccccggcga
     2581 caaggccac
//
LOCUS       DASUDT010000390         3276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1387623, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000390 DASUDT010000000
VERSION     DASUDT010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1387623"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1344)
                     /locus_tag="VFV26_07975"
     CDS             complement(43..1344)
                     /locus_tag="VFV26_07975"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HEX4846144.1"
                     /translation="MQPIQLSVFSETARLKQVVVHNPGPEVDQMVPGMMEKLLFDDIL
                     YGDLARHEHGQFRQVLAKVADEVLDIQDLFIEALQDEGVKLGFVEDLRRLVGLPDDTC
                     NLLRDMAPADAARSVIGGLPWDDMPSHTPWEQEFDYRVRPIPNLLFMRDPASVIGDGY
                     SVNSMATWAREREPLILSYVFRHHPRLKHHTDQDKWFDQVTPLVRGEIKAPVSLEGGD
                     ILVLSHKVLAVGCSERTQADAIHLLAESLRAHRAEDESSFDHLLMVLMPKKRSAMHLD
                     TIFTRTSEDECLVYPPYFLEGSRELLNVTSIDLRHPELRMSTHPSLLKALRRVGIDLK
                     PIFCGGNDFILQQREQWTDGANAFCLAPGVITSYGRNLATGDALAKAGYRVVTAQAVL
                     TDPALDLLDGNKYLVQIEASELSRARGGPRCMTMPLAREGR"
     gene            1602..2183
                     /locus_tag="VFV26_07980"
     CDS             1602..2183
                     /locus_tag="VFV26_07980"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX4846145.1"
                     /translation="MAAFVTQPAPDFKADALVNGEFKQISLSDYKGKKVVLFFYPLDF
                     TFVCPTEILAFADAIKEFEARHTQVIGVSVDSKFSHHAWVNTPRKDGGIQGVTFPLVS
                     DLNKTIAQDYNVLLPAGIALRGLFIINKDGILKHITVNHNDLGRSVEEVLRLLDAVDF
                     SEEHGEVCPANWHKGEKAMKPNAEGLKAYVATK"
     gene            2280..2882
                     /locus_tag="VFV26_07985"
     CDS             2280..2882
                     /locus_tag="VFV26_07985"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEX4846146.1"
                     /translation="MPSTLDHLTPPAPLIRRRGWPVRALGRAYLRLSGWEVEGAFPET
                     PKFVAIVAPHTSNWDFPLGLAILFALEFRASWLGKHTLFKGPLKGLLKGLGGIPVDRR
                     ASHGVVGACVAAFEEAPALMLGLAPEGTRKGVSRWKSGFYQIACAAGVPILPVGFDYR
                     THVVRLMPLFHPTGDLDQDLPRIQALFSDVHGLRERPARG"
     gene            2901..>3276
                     /locus_tag="VFV26_07990"
     CDS             2901..>3276
                     /locus_tag="VFV26_07990"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4846147.1"
                     /translation="MDPHSGPPPTFLVLGAGLSGLMAARRLCQRGHAVEVWEGSPAVG
                     GWAQTLPWPGPQGEPGFLERGPQSLRVAPGGPLERLLRDLELDLRPSGPRGPRWLGRA
                     GARHPSPATLRGLVRAPGLTLPQ"
BASE COUNT          485 a         1184 c         1073 g          534 t
ORIGIN      
        1 gggccccctc ggagccaggg ggtttctgga caccccggcc cctcagcgcc cttcccgggc
       61 cagcggcatg gtcatgcagc ggggcccgcc ccgggcccgg ctcagttcgc tggcctcgat
      121 ctgcaccagg tacttgttcc cgtccagcag gtccagggcc gggtcggtca gcaccgcctg
      181 ggccgtcacc acccggtagc cggccttggc cagggcgtcg ccggtggcga ggttccgccc
      241 gtagctggtg atgacgccgg gggccaggca gaaggcgttg gcgccatccg tccactgctc
      301 ccgctgctgg aggatgaagt cgttcccccc gcagaagatg ggcttgaggt cgatgcccac
      361 ccgccgcagg gccttcagca ggctgggatg ggtgctcatg cgcagctcgg ggtggcgcag
      421 gtcgatgctg gtcacgttca gcagctcccg gctgccctcc aggaagtagg gcgggtagac
      481 cagacactca tcctcgctgg tgcgcgtgaa gatcgtgtcc aggtgcatgg cgctgcgctt
      541 cttgggcatg agcaccatga gcaggtggtc gaagctggac tcgtcctcgg cccggtgggc
      601 ccggaggctt tccgccagca ggtggatggc gtccgcctgg gtgcgctcgg agcatcccac
      661 cgccagcacc ttgtggctga gcaccaggat gtcgccgccc tccaggctca cgggggcctt
      721 gatctcgccg cggaccaggg gcgtcacctg gtcgaaccac ttgtcctggt ccgtgtggtg
      781 cttcaaccgg gggtggtgcc ggaagacgta gctgaggatg agcggttccc gctcccgggc
      841 ccaggtggcc atggagttca cgctgtagcc gtcgccgatg accgaagcag gatcgcgcat
      901 gaacagcagg ttggggatgg gccgcacccg gtagtcgaac tcctgctccc agggggtgtg
      961 actgggcatg tcatcccagg ggaggccccc aatgacgctg cgggcggcgt ccgccggagc
     1021 catgtcgcgc agcaggttgc aggtgtcgtc cggcaggccc accaggcggc gcaggtcctc
     1081 cacgaagccc agcttcacgc cctcgtcctg cagggcctcg atgaagaggt cctggatgtc
     1141 cagcacctcg tcggccacct tggccagcac ctggcggaac tggccatgct cgtgccgggc
     1201 caggtcgcca tagaggatgt cgtcgaagag cagcttctcc atcatcccgg gcaccatctg
     1261 gtccacttcg ggaccggggt tgtggaccac cacctgcttg aggcgggcgg tttcggagaa
     1321 gacggaaagc tggatgggct gcatggggga agcctcggaa gtcccaaact ccggagcgta
     1381 gcacgcggtt ccgggcccgt cccgggcctg ttcccgggcc ttgacagtcc ggaaaccgcc
     1441 atcagtggga gccagcggga ccgggcgcgt tcaattgacc cccaggtttt gtatatctga
     1501 ccaattttgt cggatatttt ccttgaaccc tgcagacccg gcgcgtagcc tgatttctcc
     1561 caccgaattc cccggggcga gaccccttca tggaggcacc aatggccgca ttcgtcaccc
     1621 agcccgcacc cgatttcaag gccgatgccc tggtcaacgg cgagttcaag cagatctcgc
     1681 tgtccgacta caagggcaag aaggtcgtgc tcttcttcta ccccctcgac ttcaccttcg
     1741 tctgccccac ggagatcctg gccttcgccg atgccatcaa ggagttcgag gcccgccaca
     1801 cccaggtcat cggcgtcagc gtcgattcca agttcagcca ccacgcctgg gtgaacaccc
     1861 cccgcaagga cggcggcatc cagggcgtga ccttccccct ggtctccgac ctcaacaaga
     1921 ccatcgccca ggactacaac gtcctgctgc ccgccggcat cgcgctgcgc ggcctcttca
     1981 tcatcaacaa ggacggcatc ctcaagcaca tcaccgtgaa ccacaacgac ctgggccgca
     2041 gcgtggagga agtcctccgc ctcctggacg ccgtggactt cagcgaagag catggcgaag
     2101 tctgccccgc caactggcac aagggcgaga aggccatgaa gcccaacgcc gagggcctga
     2161 aggcctacgt ggccaccaag tagtccggga accaccactc tggaggggcg ccggaaggcg
     2221 ccctttctgt ttcaatttcg gagggctctc ctccagggga gccccttccc ggaagccctg
     2281 tgccatcgac cctggaccac ctgacccccc ccgcccccct catccggcgg cggggatggc
     2341 ctgtccgggc cttggggcgg gcctacctgc ggctcagcgg ctgggaggtc gaaggcgcct
     2401 tcccggagac ccccaagttc gtggccatcg tggcccccca cacctccaac tgggacttcc
     2461 ccctggggct ggccatcctg ttcgccctgg agttccgggc ctcctggctg ggcaagcaca
     2521 cccttttcaa ggggcccctc aagggcctcc tcaaggggct gggcggcatc cccgtggacc
     2581 gtcgggccag ccacggggtg gtgggcgcct gtgtggcggc cttcgaagag gccccggccc
     2641 tcatgctggg cctggcgccg gaaggcaccc gcaagggggt gagccgctgg aagtccggtt
     2701 tctaccagat cgcctgcgcg gccggcgtgc ccatcctgcc cgtgggcttc gactaccgca
     2761 cgcatgtggt ccggctcatg cccctgttcc atcccaccgg cgacctggac caggacctgc
     2821 cgcgcatcca ggccctgttc agcgacgtcc acggcctgcg ggaacgcccc gcccggggct
     2881 gattcccgcc caggagcccc gtggaccccc attcaggccc tccccccacc ttcctcgtcc
     2941 tcggcgccgg cctctccggc ctcatggccg cccggcgcct ctgccagcgc gggcatgccg
     3001 tggaagtctg ggagggctcc cccgccgtgg gcggctgggc ccagaccctg ccctggccgg
     3061 ggccccaggg cgaaccgggc ttcctggaac gcggacccca gtccctgcgc gtggccccgg
     3121 gcggcccgct ggaacgcctg ctccgcgacc tggagctgga cctgcggccc tccggcccca
     3181 gggggccccg ctggctgggc cgggccgggg cacggcaccc cagcccggcc accctgcggg
     3241 gcctggtgcg ggcgcctggg ctgacccttc cccaga
//
LOCUS       DASUDT010000391         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_260984, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000391 DASUDT010000000
VERSION     DASUDT010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260984"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VFV26_07995"
     CDS             complement(<1..791)
                     /locus_tag="VFV26_07995"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX4846148.1"
                     /translation="MLKERPAFAFPGLPILLVDLLVVLGALALTIQGGLQNDPGRFPY
                     TIPVLVLGLFALTGLFVVNPNEAAALQLFGAYRGTVRSAGMAWANPFLTKRKISTKVR
                     SFESQRLKVNDLDGNPVEIAAIVVWRVVDTAEALFEVEDCEKYVTVQSEAALRALASH
                     FPYDAHEAGQRSLRGSMDEVAAKLKQELQHVLSQAGVEVQDARISHLAYAPEIAQAML
                     QRQQASAIIAARQKIVEGAVGMVEMALDLLSRSTQVKLDEERRAA"
     gene            complement(821..1450)
                     /locus_tag="VFV26_08000"
     CDS             complement(821..1450)
                     /locus_tag="VFV26_08000"
                     /inference="COORDINATES: protein motif:HMM:NF021511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HEX4846149.1"
                     /translation="MTSNRLPAGLLLLTALAFLLLGWSPRADRFTWLMENLPVIVGVP
                     VLAATRRRFPLTPLLYILIALHCLVLMVGGHWTYAEVPAGHWVKDWLHLARNPYDRLG
                     HLFQGFVPVLVFREILLRKGILKPGPWSVFVLLLMVLGLSAAYELMEWQTVVWTGSSA
                     DAFLGTQGDPWDTQWDMACALIGAGLALASLAWLQDRQRSLAGLDKIPM"
     gene            1528..2316
                     /locus_tag="VFV26_08005"
     CDS             1528..2316
                     /locus_tag="VFV26_08005"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4846150.1"
                     /translation="MDLGIRGKVAMVAAGSKGLGRAAALALAAEGCAVSVCGRGAESL
                     AAVKAELEALGVRALAVAADVSKAEELARWHEATVAALGPVQILVTNTGGPKAATFDG
                     LSDADWAEGVDSTLMNVVRLARLVLPGMRAAQWGRIIHITSLVAKQPYPLLTISSTLR
                     AGLSGLTRTLALETAADGITVNALLPGHIMTDRQHHLAAVKSQAEGITVEEHFTRQAA
                     TIPARRIGRPEEAGAVIAFLCSGQASYLTGQSLLVDGGLVQGTF"
     gene            complement(2358..>2600)
                     /locus_tag="VFV26_08010"
     CDS             complement(2358..>2600)
                     /locus_tag="VFV26_08010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846151.1"
                     /translation="ALRVRLNHRQKALLTHALKHPGAGYRIEDHQRTHGIVYQTARTD
                     LLQMAELGLLEKIKEGRAFLFVAPEDLATRMARLET"
BASE COUNT          433 a          868 c          906 g          393 t
ORIGIN      
        1 atggccgccc tgcgctcctc gtccagcttc acctgggtgc tcctcgagag gaggtccagg
       61 gccatctcca ccatccccac cgcgccctcc acgatcttct ggcgggcggc gatgatggcc
      121 gaggcctgct ggcgctgcag catggcctgg gcgatctccg gcgcgtaggc cagatggctg
      181 atgcgggcgt cctgcacctc gacgccggcc tgtgacagga cgtgctggag ttcctgcttc
      241 agcttggcgg ccacctcatc catgctgccg cggagggacc gctggcccgc ctcgtgggca
      301 tcgtagggga agtgggaggc cagggcacgc agggccgcct cgctctggac cgtcacgtat
      361 ttctcgcagt cctccacctc gaagagggcc tccgccgtgt ccaccacccg ccagacgacg
      421 atggcggcga tctccacggg gttgccgtcc aggtcattca ccttcagccg ctggctttcg
      481 aagctgcgca ccttggtgct gatcttccgc ttggtgagaa aaggattggc ccaggccatg
      541 ccggcggagc gcacggtgcc gcggtaggcc ccgaaaagct gaagggcggc ggcttcgttg
      601 gggttcacca caaacaggcc cgtcagggcg aacaggccga gcaccagcac ggggatggtg
      661 taggggaagc ggcctggatc attctgcagg ccgccctgga tggtgagagc cagggccccc
      721 aggaccacca gcaggtccac cagcaggatg ggcaggccgg ggaaagcaaa cgcaggacgt
      781 tccttgagca tgaggtcctc caagagaaat caatgtgata tcacattggt atcttgtcaa
      841 gcccggccaa ggacctctgg cgatcctgca gccaggcgag gcttgccaaa gccaggccgg
      901 cgccgatgag ggcgcaggcc atgtcccact gggtgtccca gggatcgccc tgggtgccca
      961 ggaaggcatc cgccgaactg cccgtccata cgacggtctg ccactccatg agttcgtagg
     1021 ccgcgctgag ccccagcacc atgaggagca gcacgaagac ggaccagggc cccggcttca
     1081 ggatgccttt gcgcaacagg atctcgcgga agacgagcac cggcacgaag ccctggaaca
     1141 ggtggcccag ccggtcgtag ggattgcggg ccaggtgcag ccagtccttc acccagtggc
     1201 ccgcgggcac ctccgcgtag gtccagtggc cgcccaccat cagcaccagg caatgcaggg
     1261 cgatcaggat atagagcagg ggcgtgagcg ggaagcgccg gcgggtggcc gccaacaccg
     1321 gcaccccgac gatcacgggc aggttctcca tgagccaggt gaagcggtcc gcgcgggggg
     1381 accatcccag cagcaggaac gccaaggccg tgagcagcag aagcccggct gggagtcggt
     1441 tcgatgtcat ggcgtgcccc tgagttgcct tgatcaggac gaggataaca acccggcgga
     1501 ccgcctatgc tggtccggga ggacagcatg gatctgggca ttcgcggcaa ggtggccatg
     1561 gtggcggcgg gcagcaaggg cctggggcgg gcggcggccc tggccctggc ggcggagggc
     1621 tgcgctgtgt ccgtgtgcgg gcggggcgcg gagtccctgg ccgcggtgaa ggccgagctg
     1681 gaggccctgg gcgtgcgcgc cctggccgtg gcggcggatg tgtcgaaggc cgaggagctg
     1741 gcccggtggc atgaggccac ggtggccgcc ctggggcccg tgcagatcct cgtcaccaac
     1801 accggaggcc ccaaggccgc caccttcgac ggcctgtccg atgccgactg ggccgagggc
     1861 gtggactcca ccctgatgaa cgtggtgcgc ctggcgcgcc tcgtcctgcc gggcatgcgg
     1921 gccgcgcagt ggggccgcat catccacatc accagcctgg tggccaagca gccctacccc
     1981 ctgctcacca tcagctccac cctgcgggcg gggctctcgg gactgacgcg gaccctggcc
     2041 ctggagaccg ccgcggacgg catcaccgtc aacgccctgc tgccgggcca catcatgacc
     2101 gaccgccagc accacctggc ggccgtgaaa tcccaggcgg agggcatcac ggtggaggag
     2161 cacttcaccc gccaggccgc caccatcccc gcccgccgca tcggccgccc cgaggaggcc
     2221 ggcgccgtca tcgccttcct ctgcagcggc caagcgtcct acctcaccgg ccagagtctg
     2281 ctggtggatg gagggctggt gcagggcacg ttctgatcag aaggatttcg ccgagccctc
     2341 cggctcaacc ggcgacccta tgtttcgaga cgagccatcc tggttgccag gtcttcaggc
     2401 gccacgaaaa ggaacgcgcg cccttccttg atcttctcga ggagtccgag ctccgccatc
     2461 tggagcaggt cggtccgggc ggtctggtag acgatgccat gcgttctctg gtgatcctcg
     2521 atgcggtagc ccgcgccggg atgtttcaag gcatgggtga gaagggcctt ctgacggtgg
     2581 ttgagcctga cgcgcagggc
//
LOCUS       DASUDT010000392         3564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2072801, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000392 DASUDT010000000
VERSION     DASUDT010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3564
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2072801"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..974
                     /gene="argS"
                     /locus_tag="VFV26_08015"
     CDS             <1..974
                     /gene="argS"
                     /locus_tag="VFV26_08015"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012952.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX4846152.1"
                     /translation="PTLKRLEDAGLLEEGPHGARIVDLADVGIATPCLVQKADGTSIY
                     ATRDLAAALYRKAAYGFDRCLYVVGTDQVLHFQQIFAVLDKLEPWFQGRMLHTPFGMV
                     KLPEGKMSTRKGNVIFLEDVLDEARERVAAIIEEKNPELKDKDAVAEMLGMGAVVFFD
                     AMNDRVKPITFTWDRVIALDGDTGPYVQYAHARILSVLRKAGGDWVTKAQFQSAQGPF
                     LSYSEAQLPSQLSGLAAPEAQALLFELAGLPGAISAVADGCMATPLARQLVSVARSFS
                     GFYTNCPILAPENAPEVRDARLALCVATARALRQGLFLMGIQAPEEM"
     gene            971..1405
                     /locus_tag="VFV26_08020"
     CDS             971..1405
                     /locus_tag="VFV26_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX4846153.1"
                     /translation="MSWETEKDHHQDTKTPRKDLSKDEEEVAALIVDAAIKVHRALGP
                     GLLESVYEACLAHELKQRGLSVETQVPVPIHYEGLTLDGGLRLDMLVGGIALIELKAV
                     EKLLPVHDAQLLTYLKLSGRRLGFLLNFNVPVMKNGISRFVL"
     gene            1469..3079
                     /locus_tag="VFV26_08025"
     CDS             1469..3079
                     /locus_tag="VFV26_08025"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX4846154.1"
                     /translation="MTKYVFVTGGVLSSLGKGIAAASLGALLEARGLKVTLMKMDPYL
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFTSVPTTQNHTITTGRIYNTVIQKE
                     RRGDYLGKTVQVIPHITDEIKGVMKKVAKDMDVVIVEIGGTVGDIESQPFLEAIRQFK
                     LEAGLDSQMKANAINMHLTYVPFIKAAGELKSKPTQHSVKELRALGIQPDVLLCRAEQ
                     DIPRDLKDKIALFCSVTPDAVFSARDAHSIYEVPLNLHLEGLDKKAAALLGLGEKEPD
                     LSAWQNLLHRIRNPKGNVRIGVVGKYVEFKESYKSLIEALHHAGYGLETHVDLKWIEA
                     EELENQEPAAFLQDCHGILVPGGFGVRGTRGMIKSIQYAREHKIPFFGICLGMQMASV
                     EFARNVAGLEGADSTEFDDAPKHRVIFKLRELVDVEELGGTMRLGAYPCRLAPDSQAA
                     KAYGSTEISERHRHRYEFNHEFKKALEDKGLVFTGMSPDGVFVEIVELKDHPYFLACQ
                     FHPEFKSRPLNPHPLFTAFVKASATSRG"
     gene            3286..>3564
                     /locus_tag="VFV26_08030"
     CDS             3286..>3564
                     /locus_tag="VFV26_08030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846155.1"
                     /translation="MQLSGLRYGSKLLHLVEFPVADFIDGSATNQDIQQFLEKHRKLV
                     VKPAFYGGVGKKGKAGLVRIVSTLQEALQAKRELFFAQHVYGNKTVTAN"
BASE COUNT          678 a         1163 c         1122 g          601 t
ORIGIN      
        1 cgcccaccct gaagcggctc gaggatgcgg gcctgctgga ggaggggccc cacggcgcgc
       61 gcatcgtgga cctggccgac gtgggcatcg ctacgccctg cctcgtgcag aaggccgacg
      121 gcaccagcat ctacgccacc cgcgacctgg cggcggcgct gtaccgcaag gctgcctacg
      181 gcttcgaccg ctgcctctac gtggtgggca cggaccaggt gctgcacttc cagcagatct
      241 tcgccgtgct cgacaagctg gaaccctggt tccagggccg catgctgcac acgcccttcg
      301 gcatggtgaa gctgcccgag gggaagatga gcacccgcaa gggcaacgtc atcttcctgg
      361 aggacgtgct ggatgaggcc cgcgagcgcg tggccgccat catcgaagag aagaacccgg
      421 agctgaagga caaggacgcc gtggccgaga tgctgggcat gggcgccgtg gtgttcttcg
      481 acgccatgaa cgaccgcgtg aagcccatca ccttcacctg ggaccgcgtc atcgccctcg
      541 acggcgacac gggcccctac gtgcagtacg cccacgcccg catcctgagc gtgctgcgca
      601 aggccggcgg cgactgggtg acgaaggccc agttccagtc ggcccagggc cccttccttt
      661 cctactcgga agcgcagctt ccgagccagc tcagcggcct tgccgccccc gaagcccagg
      721 ccctgctgtt cgagctggcc ggcctccccg gcgccatctc cgccgtggcc gacggctgca
      781 tggccacgcc cctggcccgc cagctggtga gcgtggcccg ctccttcagc ggcttctaca
      841 cgaactgccc catcctggcc ccggagaacg ccccagaggt ccgcgacgcc cgccttgcgc
      901 tgtgcgtcgc caccgcccgc gccctccgcc agggcctctt cctcatgggc atccaggccc
      961 cggaggagat gtgagctggg aaacagaaaa agatcaccac caagacacca agacaccaag
     1021 aaaagatctt tcaaaagatg aagaggaagt ggctgccctc atcgtggatg cggcgatcaa
     1081 ggtgcatcgg gccctcgggc ctggattgct ggaaagcgta tacgaagcct gccttgcaca
     1141 cgaattgaag caacggggtc tgtccgtcga gactcaggtt ccagtcccca ttcactacga
     1201 aggactgacc cttgatggtg ggcttcgatt ggacatgctc gtgggtggca tcgccctcat
     1261 tgaattgaag gccgtggaga aactgctccc cgttcatgac gcgcagctcc ttacctattt
     1321 aaagctttca ggccgaagac tcggtttcct tctcaatttc aatgtccctg tcatgaagaa
     1381 cggaatctct agattcgttc tgtaagtttt ttgcagttct tggtgccttg gtgtcttggt
     1441 ggtgatcagt tgttgttagg agtgggtgat gaccaagtac gtgttcgtga ccggtggtgt
     1501 gctgagttct ctgggaaagg ggatcgccgc ggccagcctg ggcgcgctgc tggaggcccg
     1561 ggggctgaag gtcacgctca tgaagatgga tccctacctc aacgtggatc cgggcaccat
     1621 gtcgcccttc cagcacggcg aggtattcgt cacggatgac ggcgcggaga cggacctgga
     1681 cctgggccac tacgagcgct tcacctcggt gcccaccacg cagaaccaca ccatcaccac
     1741 gggccgcatc tacaacacgg tgatccagaa ggagcgccgc ggcgactacc tgggcaagac
     1801 cgtgcaggtg atcccccaca tcacggacga gatcaagggc gtgatgaaga aggtggccaa
     1861 ggacatggac gtggtgatcg tcgagatcgg cggcaccgtg ggcgacatcg agagccagcc
     1921 cttcctggag gccatccgcc agttcaagct cgaggcgggc ctggattcgc agatgaaggc
     1981 caacgccatc aacatgcacc tcacctacgt gcccttcatc aaggctgcgg gcgagctgaa
     2041 gtcgaagccc acccagcaca gcgtgaagga gctgcgggcc ctgggcatcc agccggacgt
     2101 gctgctctgc cgtgcggagc aggacatccc ccgggacctg aaggacaaga tcgccttgtt
     2161 ctgctccgtc acgccggatg cggtgttcag cgcccgggac gcccactcca tttatgaggt
     2221 gcccctgaac ctgcacctcg agggcctcga caagaaggcc gcggccctgc tgggcctggg
     2281 ggagaaggag ccggacctca gcgcctggca gaacctgctg caccgcatcc gcaatcccaa
     2341 gggcaacgtg cgcatcggcg tggtgggcaa gtacgtggaa ttcaaggaga gctacaagag
     2401 cctcatcgag gcgctgcacc acgcgggcta cggactggag acccacgtgg acctcaagtg
     2461 gatcgaagcg gaggagctgg agaaccagga gcctgccgcc ttcctccagg actgccacgg
     2521 catcctcgtg cccggcggct tcggcgtgcg cggcacccgc ggcatgatca agtccatcca
     2581 gtacgcccgg gagcacaaga tccccttctt cgggatctgc ctgggcatgc agatggcctc
     2641 cgtggaattc gcgcgcaacg tggcgggcct ggagggcgcc gattccaccg aattcgacga
     2701 tgcgcccaag catcgggtca tcttcaagct gcgtgagctg gtggatgtgg aggaactggg
     2761 cggcaccatg cgcctggggg cctatccctg ccgcctggcg ccggacagcc aggccgcgaa
     2821 ggcctacggc agcaccgaga tcagcgagcg ccaccgccac cgctacgagt tcaaccacga
     2881 gttcaagaag gccctggagg acaagggcct cgtgttcacg ggcatgagcc ccgacggcgt
     2941 cttcgtggaa atcgtggaac tgaaggacca cccctacttc ctggcctgcc agttccaccc
     3001 cgagttcaag agccgccccc tgaatccgca cccgctgttc acggccttcg tgaaggcgag
     3061 cgccaccagt cgcggctgac ctttcccgcc cacggccacc cgccgccgcg gccgaggggg
     3121 accctgccgc ggcggcggca ggggtctcac aggcatcgta ttgcgactta tgagtcatct
     3181 ttggtcttga agccaaaagg gatctgaata tcatttattc ggacccggct cctcccggac
     3241 ggaccggcgc tccaggtcat tgccaacgtc gatcgaggag ggaccatgca gctctcgggt
     3301 ttgcgctacg gctccaagct tctgcacctg gttgaattcc ccgtggcgga tttcatcgat
     3361 ggttctgcca ccaaccagga catccagcag ttcctggaga agcaccggaa gctggtggtg
     3421 aaaccggcct tctacggcgg cgtcggcaag aaggggaagg ccgggctggt gcgcatcgtg
     3481 agcaccctcc aggaggcgct gcaggcgaaa cgggagctct tcttcgccca gcacgtctac
     3541 gggaacaaga ccgtcacggc caac
//
LOCUS       DASUDT010000393         7698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1144881, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000393 DASUDT010000000
VERSION     DASUDT010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 7698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7698
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144881"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VFV26_08035"
     CDS             complement(<1..552)
                     /locus_tag="VFV26_08035"
                     /inference="COORDINATES: protein motif:HMM:NF019346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4846156.1"
                     /translation="MIQDPSQAPPVLAPPVRSAEGVRPAARAGLAALQAVVVGKDAQV
                     RRAFAALLAGGHVLLEDLPGVGKTTLAKGLSRILGGTFQRVQGTNDLLPSDLLGVHLW
                     DAKDQAFRFQPGPVFCHVLLLDELNRIGPKTQSALLEVMVEGQVTLDRATYALPDPFF
                     VIATQNPMDHSGTFPLPESQMDRF"
     gene            complement(549..1805)
                     /locus_tag="VFV26_08040"
     CDS             complement(549..1805)
                     /locus_tag="VFV26_08040"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4846157.1"
                     /translation="MDLLLVEDKDSFRRLLMQALEGSAWSVRAVADPQEALRALAAAP
                     AHVLVTDLRLPGMSGLELIRRARRLHPTLRVVLMSAFGEPRDIVEAMRLGADDFLPKP
                     FDLDAFLALLDRLWALAGAPPPDPAEPWIAHSAPMRVLDEALGRAAGTDLPVLFRGER
                     GAGKGRCARRLHTLRHPGAPYLCLAAATLGADGPDPAALRLVQGGSLYLAGLEHLAPE
                     AAASLARAMDAAGSDIHWMAGLEAGAALAPGLAQRLGALELNVPPLRERREDLLALAR
                     ALLEVDARRVGRMTPWLERAAERQLLEQSWPGNVRDLQALLGRTLAHGEGPAIRAFPD
                     LGADGAEPMSLPWPAPGSLEAMMRVAARAAEGQLLQRALSLAGGDLPRAAEGLGLSVR
                     SLGQRLRDQGISLEDDGGSSLPRKAT"
     gene            complement(1839..3212)
                     /locus_tag="VFV26_08045"
     CDS             complement(1839..3212)
                     /locus_tag="VFV26_08045"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEX4846158.1"
                     /translation="MTLLPFHLVTLSHPDWEAALACAKRLAGDALPELRLDLFPEADP
                     EALVDALKRRCLVSCRRASEGGRWPDDDEAGRLAHLLRAVKGRPAWMDLEWDLPVPPE
                     LQPARTHVRLLRSVHVAPGVFDLDERLKNLPEGEAFKWVGWAGRLGDSGRLRPALDWA
                     RDHGIALSAFLMGPKGIPSRALQAAWGGAFTYAAPDDGPAAAPGQLPLSTLRAWRSAR
                     LHPGHGLCGVIGDPVLHSRGPAFHNARFQQAFKDLLYVPLVCGEVEEAVEALDALGLL
                     GLSITAPLKLALPEALGLEGPLNTLWRRAPGEAWQGANTDAEAFGQALSHLDPGPVLL
                     LGGGGVARSCLAVLEAAGRTVLQVSRRTPADPASVAAFAPVGVVQATSLGMAAGDPAP
                     FPELLAVALPSARWAVEWIYKEDTAFALWAQEAALKLVGGISLFEAQAGGQSRRFIEG
                     CGGAMDS"
     gene            3537..4235
                     /locus_tag="VFV26_08050"
     CDS             3537..4235
                     /locus_tag="VFV26_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846159.1"
                     /translation="MRTFLRALTFVLAPALLSAAPPAMGVEGTAHDLSITGLNSVTMA
                     TKSCVFCHTIHNSSASAASKLIPDWNHTTTAATFTMYNNTNHAGADLKGTVDSQPTGP
                     SLACLSCHDGTVSVGSLVVAPLGGGNDTYISARGGVSPGTGRISSGNALVGTDLSNDH
                     PISITYQDNLDTGLQPAASLTGVRLYPANVTGAKVQCSSCHDVHNYGSAGTTAPFLRA
                     TMVGSFLCRTCHKK"
     gene            4647..7691
                     /locus_tag="VFV26_08055"
     CDS             4647..7691
                     /locus_tag="VFV26_08055"
                     /inference="COORDINATES: protein motif:HMM:NF025890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4846160.1"
                     /translation="MTVSRRALAHLLFLLMTSLTPGWAGAAPKTCQECHPKVAQAAAP
                     ATAHKPLLDGNCKWCHRPHGNANVNLLHEGGGRALCAICHKGFKPARDERAAHRFPAK
                     GECSACHGSHDTGRKKLLRKETQELCLSCHADVKARTTSAHPHPATEDCLACHSPHPS
                     ATRYLLKAGIPGQCDACHDTAGLSKSHGGLPLKASACASCHNPHGAPGKGMLRDRQHA
                     PFAPGQCADCHASSSGSTVQLAKPMPGLCLDCHGPLPGPGVQHQPVKDGQCLTCHLPH
                     SANGKGLLVAPPQELCITCHTGLVKGKSQHPPFRDGACSDCHKPHDSAEKGLLTAPAE
                     KLCLSCHEDLVKGKSQHAPAAGGDCLACHESHSSPIAPVLKQPAAELCATCHTDVAKG
                     SVPHEPAKKGQCLACHSPHASAASSLIKGGQLAACGACHKKIVDRKVLHGPVKNGECS
                     ACHTPHGGSLPKLLKDDTDKLCTACHDSLLKGDTRHKPATGKGGCLACHNPHGGDKAK
                     YLKRDQPDNCYACHTRKDRFQVVHAPVNDGACSSCHNPHSGKGPAMLAELAIQAACAN
                     CHDLADEALQRKHLTSSFQKVDCLGCHEPHTSQKKGLILKGAHPPFTENCANCHAVPA
                     AGAKVPAGTPRLDQPVPQLCKACHADLEPKPGATQHQPFQAGECATCHRPHASRNEAL
                     LDKPQSQVCLTCHDRPERPKDGWGHKPYLDSSCRECHAPHHTQEKHLLRQKPLDLCLT
                     CHTAIATAVKSKHPHPPAASGECLSCHAAHTGQQARGLIQPVAELCVTCHDAGDLRKA
                     HKGYPVSAKDCATCHDPHGSNQGGMLRATAHPPVAEGGCSTCHTEPTTPKPFATNEAM
                     PGLCFNCHDGVAAAAKKAFPHPPVANGECTTCHTPHASSLPSLLAGNPKDLCLQCHDG
                     LRDEADKAVSKHKPVMDGLCATCHTAHGGDAKGFPRGKVQDLCLSCHKDKKGNHPSAN
                     HPTSDRIIKATGKPLTCLSCHQPHFSTNPKLLAVTDCDTCHK"
BASE COUNT         1349 a         2951 c         2401 g          997 t
ORIGIN      
        1 gaagcggtcc atctggctct caggcagggg gaaggtgccc gagtggtcca tggggttctg
       61 ggtggcgatg acgaagaagg ggtccggcag cgcgtaggtg gcgcggtcca aggtcacctg
      121 gccctccacc atcacctcca gcagggcgct ctgggtcttg gggccgatgc ggttcagctc
      181 gtccagcagc agcacatggc agaagaccgg gcccggctgg aaccggaagg cctggtcctt
      241 ggcatcccag aggtggacgc ccagcagatc cgacggcagc agatcattgg tgccctgcac
      301 ccgctggaag gtgccaccca ggatgcggga tagtcccttg gccagcgtgg tcttgccgac
      361 tcccgggagg tcctccagca gcacgtggcc cccggccaga agggccgcga aggcccgccg
      421 cacctgggca tccttcccca ccaccacggc ctggagcgcc gccagcccag cccgcgccgc
      481 cgggcggacg ccctcagcgg accgcacggg aggggcgagg acgggggggg cctggctggg
      541 atcctgaatc atgtggcctt cctggggaga gagctccctc catcatcttc cagagagatg
      601 ccctgatccc gcaagcgctg acccaggctg cgcaccgaaa ggccgaggcc ttctgcggcg
      661 cggggaagat cgccgcccgc cagggacagg gcccgctgca gaagctgacc ctccgccgcc
      721 cgggcggcca cccgcatcat ggcctccaga gagcccggcg cgggccaggg gaggctcatg
      781 ggctccgcac catccgcgcc gagatccggg aaagctcgga tggcgggccc ctccccatgc
      841 gccagggtcc ggcccagcaa agcctggagg tcgcgcacat tccctggcca ggactgctcc
      901 agcagctggc gctccgcggc gcgctccagc catggtgtca tccgccccac gcgccgggca
      961 tccacctcca gcagggccct ggccagggcc agcagatcct cccgacgctc ccgcaggggc
     1021 ggcacgttca gttccagggc gcccaggcgc tgggccaggc ctggcgccag cgctgctccg
     1081 gcctccaggc cagccatcca gtggatgtcc gatccggccg cgtccatggc gcgggccaaa
     1141 gatgcggcag cctccggcgc cagatgctcc aatcccgcca ggtagaggct tcccccctgg
     1201 accagccgga gggcggcggg atcaggcccg tcggccccca gcgtggccgc ggccaggcac
     1261 aggtacggcg cgccgggatg ccggagggtg tggagccgcc gggcgcaacg ccccttgcca
     1321 gccccccgct ccccgcggaa gagcaccggc agatccgtcc ccgcggcccg gcccagggct
     1381 tcatccagga cccgcatggg ggcgctgtgg gcgatccagg gttcggccgg atccggcggc
     1441 ggcgccccgg ccagggccca caggcggtcc agcagggcca ggaaggcatc caggtcgaag
     1501 ggcttgggaa ggaagtcatc ggcgcccagc cgcatggcct ccacgatgtc cctgggctcg
     1561 ccgaaggcgg acatgagcac cacgcgcagg gtgggatgca gccgccgcgc ccgccggatc
     1621 agctccaggc cgctcatgcc cggcaggcgc aggtccgtca ccaggacgtg ggccggcgcc
     1681 gccgccaggg cgcggagggc ctcctgcgga tccgccaccg cccgcaccga ccaggccgat
     1741 ccctccaggg cctgcatcaa caggcgccgg aagctgtcct tgtcctcgac gagcagcagg
     1801 tccatgggaa gaagctatca gctgtcggcg atccgctgtc agctatccat ggccccgccg
     1861 cacccttcaa tgaaccggcg gctctggcct ccggcctggg cttcgaagag gctgatgcct
     1921 ccgaccagct tcagggccgc ctcctgggcc cagagggcga aggcggtgtc ctccttgtag
     1981 atccactcca cagcccagcg ggcgctggga agggccaccg ccaggagctc cgggaagggc
     2041 gccgggtccc cggccgccat ccccaggctg gtggcctgca ccacgcccac gggcgcgaag
     2101 gcggccacgg aggcgggatc cgcaggcgtc cgccgggaaa cctggagcac ggtccggccc
     2161 gcggcctcca gcacggccag acatgagcgt gccacccccc cgccgcccag cagcagcacc
     2221 ggccccggat ccagatgcga cagcgcctgt ccaaaagcct ccgcatccgt attggccccc
     2281 tgccaggcct cccccggcgc ccggcgccac agggtgttca gagggccctc caggcccagg
     2341 gcctccggca gcgccagctt gagcggcgcc gtgatgctca ggcccaggag gccgagggcg
     2401 tccagggcct ccacagcctc ctccacctcg ccgcacacca ggggcacata gagcaggtcc
     2461 ttgaaggcct gctggaaccg cgcgttgtgg aaggccgggc cccgggagtg cagcaccgga
     2521 tccccgatga cgccgcagag gccgtggccc gggtgcagcc gtgccgagcg ccaggcccgc
     2581 agcgtggaca gggggagctg ccctggggcc gcggcggggc catcgtccgg agcggcgtag
     2641 gtgaaggcgc cgccccaggc cgcctgcagg gcccggctgg ggatgccctt cggtcccatg
     2701 aggaaggcgg agagggcgat tccgtgatcg cgggcccaat ccagggcggg ccgcaggcgg
     2761 ccgctgtcgc ccaggcgccc ggcccagccc acccacttga aggcctcgcc ttcgggcagg
     2821 tttttcaacc gctcatccag atcgaagacc ccgggtgcca cgtgcaccga gcgcagcagg
     2881 cgcacgtggg tgcgggcggg ctggagctcc ggcggcacgg gcaggtccca ttccagatcc
     2941 atccaggcgg ggcgcccctt cacggcgcgg aggaggtgcg ccaggcggcc cgcctcgtcg
     3001 tcatcgggcc agcggccccc ttcggaggcc cggcggcagc tcaccaggca gcggcgcttg
     3061 agggcgtcca ccagggcctc gggatcggcc tcggggaaga ggtccaggcg cagctccggc
     3121 agcgcatccc cggccagccg cttggcgcag gccagggccg cctcccaatc ggggtggctc
     3181 agggtgacga ggtggaacgg gagaagggtc atggtgagga cgtccggccc cgccatccta
     3241 ccgtcagcgc ccgggggccg cccccaggaa agccttggca gcgcttgcct tccaaagaag
     3301 gccgaggggc gtctgtgatc tagagtgcct aacaaaaccc ccacggggcc gcgagaacat
     3361 ggtgatcccc cgagggtgtg ccggaaccgg ccccttccag gggagccctg ccgatcgtaa
     3421 aggcacagac ggcagctctt gccggaaacg gccgtttagc attttttgcc ctgcctgccg
     3481 ctcaaaattt cacttgttcc cgggaaactc gacaacaagc gcaaaggagc atttccatgc
     3541 gcaccttcct tcgtgccctc accttcgtgc tcgccccggc cctcctgtcc gcggccccgc
     3601 ctgccatggg cgtggaggga acggctcacg acctgagcat cactggattg aactccgtga
     3661 ccatggcgac caagtcctgc gtcttctgcc acacgatcca caactccagc gccagcgctg
     3721 cttcgaagct catcccggac tggaaccaca ccaccaccgc cgcgaccttc acgatgtaca
     3781 acaacaccaa ccacgcgggc gcggacctca agggcaccgt ggactcccaa cccacggggc
     3841 ccagcctggc ctgcctctcc tgccacgatg gcacggtatc cgtgggctcc ctggtggtcg
     3901 cccccctggg cggcggcaac gacacctaca tcagtgcgcg ggggggcgtc agcccgggca
     3961 cgggacgcat cagctccggc aacgccctcg tggggacgga tctcagcaat gaccatccca
     4021 tctccatcac ctaccaggac aacctggata ccgggctcca gcccgcagcc tccctcaccg
     4081 gcgtgcgcct ctatcccgcg aatgtcacgg gcgcgaaagt gcaatgctcc tcctgccacg
     4141 atgtccacaa ctacggatcc gccggaacca ccgcgccctt cctgcgcgcc accatggtgg
     4201 gatccttcct ctgccggacc tgccacaaga agtaggcgcc ggcgatgcca agcaacaggc
     4261 cgcagtttct gcggcctgtg tttttttgag gcgatccatg ggccgggagg attcgtgacc
     4321 ggcatcacct gccaggagat gagagtcccg aagaagccca gaaaaagcgg ccaagccccc
     4381 tcctacctcg atccttgcct ggcaggtaaa cctttcattc acctgataac acgggctgga
     4441 actcggacat tctcgtgacc gccttgagaa ccaccagaac gccacacgaa tccccctccc
     4501 tgcgccctgg ccggaattta accagaccat ctccctttat cggacccgtc gcgccgttgc
     4561 cggacggcag gggatcttgg gtgaaacaaa gatgacgtta ggatagggaa tgccccccgg
     4621 gctcattcca tgagatcgcc aacgccatga ccgtctcacg ccgggccctc gcccacctcc
     4681 tgttcctcct gatgaccagc ctcactcccg gctgggctgg tgccgcgccc aaaacctgcc
     4741 aggaatgcca cccgaaggtg gcccaggcgg ccgcccctgc cacggcccac aagccgcttc
     4801 tggacgggaa ctgcaagtgg tgccacaggc cccacggcaa cgcgaacgtc aacctgctcc
     4861 acgagggcgg cggccgggcg ctttgcgcca tctgccacaa gggattcaag ccggcccggg
     4921 atgaacgcgc cgcccaccgc ttccccgcaa aaggcgaatg cagcgcctgc cacggatccc
     4981 acgacaccgg gcggaagaag ctgctccgga aggaaaccca ggaactgtgc ctctcctgcc
     5041 atgcggacgt caaggcccgc accacgtcgg cacatcccca ccccgccacc gaagactgcc
     5101 tggcctgcca ctcgccccat ccctcggcca cccgctacct cctgaaggcg ggcattccgg
     5161 ggcagtgtga tgcctgccat gacacggcgg gcctttcgaa atcccatggt ggccttcccc
     5221 tgaaagccag cgcctgcgcc agttgccaca atccccacgg agccccgggc aagggcatgc
     5281 tgcgggaccg gcagcatgca cccttcgcgc ccggccagtg cgctgattgt cacgcctcct
     5341 catctggcag taccgtccag ttggccaagc ccatgcctgg gctctgcctg gattgccatg
     5401 gccccctgcc cggccccggc gtccagcatc agcccgtcaa ggacggccaa tgcctcacct
     5461 gccatctgcc ccactccgcg aatggcaagg gactcctcgt ggcgcccccc caggagctct
     5521 gcatcacctg ccatacggga ctcgtgaagg ggaagtccca gcatcccccc ttccgcgacg
     5581 gcgcctgcag cgactgccac aagccccacg actcggccga aaagggcctg ctcacggcgc
     5641 ccgcggagaa actctgcctc agctgccacg aggacctggt caaggggaag agccagcacg
     5701 cgcccgcggc cggaggggac tgcctcgcct gccatgagtc ccattccagt ccgatcgcgc
     5761 ctgtcctcaa gcagccggcg gccgaactgt gcgccacctg ccacaccgat gtggcgaagg
     5821 gaagcgttcc ccacgagccc gcaaagaagg gacagtgcct cgcctgccat tcgccgcatg
     5881 cctctgcggc ctccagcctc atcaagggcg gccagctcgc cgcctgcggg gcctgccaca
     5941 agaagatcgt ggaccggaag gttcttcacg gacccgtgaa gaacggggag tgcagcgcct
     6001 gccacacccc ccacggcggc agcctcccca aactcctgaa ggacgacacg gacaagctct
     6061 gcacggcctg ccacgacagc ctgctgaagg gcgacacccg gcacaagccc gccaccggca
     6121 agggcggatg cctcgcctgc cacaatcccc acggtggcga caaggcgaag tacctcaagc
     6181 gcgaccagcc cgacaactgc tacgcctgcc acacccgcaa ggacaggttc caggtggtcc
     6241 atgcccccgt gaacgatggc gcatgcagca gctgccacaa cccgcattcc ggcaaagggc
     6301 cggccatgct cgccgagctt gcgatccagg cggcctgcgc gaactgccac gatctggccg
     6361 acgaggccct gcagcggaag cacctgacca gttccttcca gaaggtggac tgcctcggct
     6421 gccacgagcc tcacacctca caaaagaagg gcctgatcct gaagggcgcg caccccccct
     6481 tcacggagaa ctgcgccaac tgccacgcgg ttccagccgc cggcgccaag gtcccggccg
     6541 gcaccccccg cctggaccag cccgtgcccc agctctgcaa ggcctgccat gccgatctgg
     6601 agcccaagcc tggcgccact cagcaccagc ctttccaggc gggcgagtgc gccacctgcc
     6661 accgccccca cgcctcccgc aacgaggccc tgctcgacaa gccccagagc caggtctgcc
     6721 tgacctgcca cgacaggccc gagcggccga aggacggctg gggacacaaa ccctatctcg
     6781 acagcagctg tcgcgaatgc cacgcgccgc accacaccca ggagaagcac ctgctgcggc
     6841 agaaacccct cgacctctgc ctcacctgcc atacggccat cgccaccgcc gtcaagtcca
     6901 agcaccccca cccgcccgcc gcctccggcg agtgcctcag ctgccacgcc gcccacacgg
     6961 gccagcaggc aaggggcctc atccagccgg tggcggaact ctgcgtcacc tgccacgacg
     7021 ccggcgacct gaggaaggcc cacaagggct acccggtgtc ggccaaggat tgcgccacct
     7081 gccacgaccc ccacggctcc aaccagggcg gcatgctgcg ggccaccgcc cacccgcccg
     7141 tggccgaggg tggctgctcg acctgccaca cggaacccac cacgcccaag cccttcgcca
     7201 ccaacgaggc catgcctggc ctctgcttca actgccacga tggtgtggcc gcggccgcca
     7261 agaaggcctt cccccacccc ccggtggcca acggagaatg caccacctgc cacacacccc
     7321 acgcctccag cctgccctcg ctcctggcgg gcaatcccaa ggacctctgc ctccagtgcc
     7381 atgacggcct ccgggacgag gccgacaagg cggtctccaa gcacaagccc gtgatggatg
     7441 gcctctgcgc cacctgccac acggcgcatg gcggcgacgc caagggcttc ccccgcggca
     7501 aagtccagga cctgtgcctg agctgccaca aggacaagaa gggcaaccac ccctcggcca
     7561 accatccgac ctcggatcgc atcatcaagg ccaccggcaa gcccctcaca tgcctgtcct
     7621 gccaccagcc ccacttctct acgaacccga agttgctggc tgtcaccgac tgcgacacct
     7681 gccataagta ggccagcg
//
LOCUS       DASUDT010000394         4287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1410241, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000394 DASUDT010000000
VERSION     DASUDT010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4287
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410241"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFV26_08060"
     CDS             <1..235
                     /locus_tag="VFV26_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846161.1"
                     /translation="ETQFLELAGTWRRDLAAVPDLTPDLMREQGLRINKALGGKVEVG
                     WSPKSGRAVYVTFEGTRKAGDKGPRRVVELDVR"
     gene            278..1477
                     /gene="tyrS"
                     /locus_tag="VFV26_08065"
     CDS             278..1477
                     /gene="tyrS"
                     /locus_tag="VFV26_08065"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX4846162.1"
                     /translation="MTAASGSVSDALALLTKGTVTCHKLDQLEARLKEGRPLRIKAGF
                     DPTAPDLHLGHGVLIRKMAQFQKLGHEVTFLIGDFTGLIGDPTGKKATRPPLTREEVL
                     ANAETYKTQVFKILDPEKTKIRFNSEWLEPLHGEQWIRLASRFTVAQMLERNDFAKRM
                     EAREPIALHELLYPLTQAYDSVALQADVELGGNDQLFNLMQGRILQEASGQKPQVVLT
                     VPLLLGLDGVEKMSKSLGNYIGFMEDPDTQFGKAMSASDALMWDWYLLLTDKLPAEIE
                     ALKQAHPMDAKKALARQIVADFHGAAAGREAEERWVRRFSERSQEEAPEVAMAPTEGE
                     VPLSRLLVDRGLAASRKEAERLLGQGAVSLDGQKVADSAVRLALRPGQSLLVKVGKLK
                     LERWVVT"
     gene            1474..3102
                     /locus_tag="VFV26_08070"
     CDS             1474..3102
                     /locus_tag="VFV26_08070"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HEX4846163.1"
                     /translation="MSLPALKDLFAKRRDRATGVWRLGLDPCRTVFLDHGDVVFAASN
                     HPLDRLTHLLVERGKITQAQLDYAMANLNPAMSIGKNLIEMGFITQRDLLDVARAQVE
                     RVVWACMAGTSESPAFEAKELDAATVRLPFDTAAMLLSGVLNLQDRERLLEVLGPLNQ
                     VVVLEGKRHQELTLPPDLVRIPALLDGSRTLLELSRESGVEPFRLGAFVLFLREMGWA
                     RLHELPPLDRRALEMALDPPPAPPISPALPEPPPERQPSLFAEIQASQFPTTNLEHLS
                     EALDQLGPEDEIEAPFAPNTQPLRSPEPSLPIHHSAAGSTRELEPPTPAPAAPSRRPW
                     VLLVLFLGSLGLWGGLRWYQRNPIILPKLTQASREQAVTSAPKLTPPTLTKTAPEPET
                     KAPPAKAVPDALPTPAPSAPPSDSKSAAKPPALPSKADRLQAILDGNLKLAATQGVSQ
                     RKAIQGKWTLRLEIACQAGTIQHAAGLLKGRDPDLFIVPMAMRDGRTCYQVFLGSYGS
                     EAAARDAAKRLPPLFLAEGNRPKPFRVAQIPDRQ"
     gene            3237..4079
                     /locus_tag="VFV26_08075"
     CDS             3237..4079
                     /locus_tag="VFV26_08075"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX4846164.1"
                     /translation="MLSPFHPTNWSKACALWIHEIHIAFDPPAPVDPGKGGVLRLMRW
                     STPRVAALVALSFTLHCTRPPATFRSQVPGSREARPDQGQAYVEEGIASWYGGNGDGF
                     AGRPTASGEIFDPEQFTCAHRTLPLGSFVEVENLDNRKRTVLRVNDRGPFIKGRVLDL
                     SRRGAEELGFLGHGTTRIRLRSVDAMGLPTALDPAADRTDPFVVQVAALSDPKNIEAL
                     THELENTFGPVTLQDVHTRGGLSVKRVRVGSYTSRQDAEQAAEQITKLLKDRGVEPFI
                     TRQR"
BASE COUNT          724 a         1577 c         1293 g          693 t
ORIGIN      
        1 cgagacccag ttccttgaat tggcgggaac ctggcgccgg gaccttgctg cagtccccga
       61 cttgactccc gatctcatgc gcgagcaggg cctgcgcatc aacaaggccc tcggaggcaa
      121 ggtggaggtc ggctggagtc cgaagtcggg ccgggctgtc tacgtcacct tcgaaggcac
      181 ccggaaggcc ggggacaagg ggccgaggcg cgtggtggaa ctggatgtcc gctgagggtc
      241 cattgaggat ctgccggttt tccgccaaga ttcaggcatg accgcagctt ccggatccgt
      301 atctgacgcc ctcgccctgc tcacgaaggg caccgtgacc tgccacaagc tggatcagct
      361 tgaggcgaga ctgaaggaag gccgtccttt gcgcatcaag gcgggcttcg atcccacggc
      421 gccggacctg cacctgggcc atggcgtgct catccgcaag atggcccagt tccagaaact
      481 gggccacgaa gtgaccttcc tcatcggcga tttcacgggc ctcatcggcg atcccacggg
      541 caagaaggcc acccgcccgc cgctgacccg cgaggaagtc ctggccaacg ccgagaccta
      601 caagacccag gtcttcaaga tcctcgaccc ggagaagacg aagatccgct tcaacagcga
      661 gtggctggag ccgcttcacg gcgagcagtg gatccgcctg gcctcccgct tcaccgtggc
      721 ccagatgctg gagcgcaacg atttcgccaa gcgcatggag gcccgcgagc ccatcgccct
      781 ccacgaactg ctttatcccc tgacccaggc ctacgattcc gtggccctcc aggccgatgt
      841 ggaactgggc ggcaacgacc agctcttcaa cctcatgcag ggccgcatcc tccaggaggc
      901 ctcgggccag aagccccagg tggtgctcac ggtgcccctg ctgctgggcc tggacggcgt
      961 ggagaagatg tccaagtccc tgggcaacta catcggcttc atggaggatc cggacaccca
     1021 gttcggcaag gccatgagcg ccagcgacgc cctcatgtgg gactggtacc tgctgctcac
     1081 ggacaagctg cccgccgaga tcgaggccct caagcaggcc catcccatgg acgccaagaa
     1141 ggccctggcc cggcagatcg tggccgattt ccatggcgcc gccgccggcc gcgaagccga
     1201 ggagcgctgg gtgcgccgct tctccgagcg cagccaggag gaggcccccg aggtggccat
     1261 ggcccccacc gaaggcgagg tccccctcag ccgcctcctg gtggaccgtg gcctggccgc
     1321 cagccgcaag gaggccgagc gcctccttgg ccagggcgct gtcagtctgg acggccagaa
     1381 ggtcgccgac tccgccgtgc gcctggcgct gcgccccggc cagtccctgc tggtgaaggt
     1441 gggcaaactc aagctcgagc gatgggtggt cacatgagcc ttccggccct caaggatctc
     1501 ttcgcgaagc gccgggatcg ggccacgggc gtgtggcgcc tgggcctgga cccctgccgc
     1561 accgtcttcc tggatcacgg cgatgtggtg tttgcggcca gcaaccatcc cctggaccgc
     1621 ctgacccacc tcctggtgga gcggggcaag atcacccagg cccagctgga ctacgccatg
     1681 gccaacctca acccggccat gtccatcggc aagaacctca tcgagatggg cttcatcacc
     1741 cagcgggacc tgctggacgt ggcccgggcc caggtggagc gggtggtctg ggcctgcatg
     1801 gccggcacca gcgaatcccc ggccttcgag gccaaggaac tggatgccgc cacggtccgc
     1861 ctccccttcg ataccgccgc catgctgctc tccggggtcc tcaacctgca ggaccgggag
     1921 cggctgctgg aggtgctggg ccccctgaac caggtggtgg tcctggaggg caagcgccac
     1981 caggaactca ccctgcctcc ggacctggtc cgcatccccg ccctgctgga tggcagccgg
     2041 accctgctgg aactgagccg cgaatccggc gtcgagccct tccgcctggg cgccttcgtc
     2101 ctcttcctcc gggagatggg ctgggcccgg ctccatgagc tcccccccct cgatcgccgg
     2161 gcccttgaga tggccctgga tccccccccg gcccctccca tctcccccgc ccttccggaa
     2221 ccgcccccgg aacgccagcc ttcccttttc gcggaaatcc aggccagcca gttccctacc
     2281 accaacctgg agcacctgtc ggaggccctg gaccagctgg gccccgagga tgagatcgaa
     2341 gcgcctttcg cgccaaacac ccagcccctg cgttcccccg aaccttccct gcccatccat
     2401 cactccgccg cgggaagcac ccgggaactg gaaccgccaa cgcccgcccc tgcggccccc
     2461 tcccggcggc cctgggtgct cctggtgctc ttcctggggt ccctggggct ttggggaggt
     2521 ctgcggtggt accagcggaa ccccattatt ctccccaaat tgacccaggc ttcccgggaa
     2581 caggcggtaa cctcggcccc gaagctgact ccccccaccc tcacaaagac cgcccctgaa
     2641 cccgaaacga aggctccacc cgcgaaggcg gtgcctgatg cgctcccgac gcccgcccca
     2701 tccgctcccc cctcagattc caaatctgcg gccaagccgc ccgcgcttcc ttccaaagcg
     2761 gatcgcctgc aggccatcct ggacggaaat ctgaaactgg cggccaccca gggtgtgtcc
     2821 cagcgaaaag ccatccaggg gaagtggacc ctgcgcctgg aaatcgcctg ccaggccggc
     2881 accatccagc atgccgcggg cctgctcaag ggccgcgacc ccgacctctt catcgtgccc
     2941 atggccatgc gggatggacg cacctgctac caggtcttcc tcggaagcta cggatccgaa
     3001 gccgctgccc gggacgccgc gaagcgcctt ccacctctct tcctggccga agggaaccgc
     3061 cccaagccct tccgggtggc tcagatccct gatcggcagt aggcataaat caaatcatca
     3121 ccgtatatat tcctattgca atgtcgagcc ctttacaaag gactccacgt aggtcatact
     3181 ttatatgtat acgaactggt ccattaaatt cgactggttg atctttgtgg agcccgatgc
     3241 tgtccccctt ccatcccacc aattggagca aggcctgcgc gctctggatc cacgagatcc
     3301 acatcgcctt cgaccctccg gctccggtgg accctggcaa aggcggcgtt ctgcggctca
     3361 tgcgctggag cacgccccgg gtggcggccc tggtggcgct cagtttcact ctgcactgca
     3421 cccggccccc tgccaccttc cggtcccagg tccccggctc ccgtgaggcc cgccccgacc
     3481 agggccaggc ctatgtggaa gagggcatcg ccagctggta cggaggcaat ggcgatggat
     3541 ttgccggccg gcccacggcc agcggtgaaa ttttcgatcc cgaacaattc acctgcgctc
     3601 accggaccct gcccctgggc agtttcgtgg aagtggaaaa cctggataac cggaagcgga
     3661 ccgtcctccg ggtgaatgac cggggcccct tcatcaaggg ccgcgtgctg gatttgtcca
     3721 ggcgcggcgc cgaggaactg ggtttccttg gtcatggcac cacccgcatc cgcctgcggt
     3781 ccgtggatgc catgggcctt cccacggccc tggatcccgc cgcggaccgc acggacccct
     3841 tcgtcgtgca ggtggccgcc ctttcagatc ccaagaatat cgaagcactt acgcacgaac
     3901 ttgaaaacac cttcggcccc gtcacccttc aggacgtcca cacccgcggt ggcctgtccg
     3961 tgaagcgggt gcgggtgggc agctacacca gccgccagga tgccgaacag gccgcggagc
     4021 agatcaccaa gctcctgaag gatcgcggtg tcgagccctt catcacccgc cagcgctgac
     4081 atggtcctgg ggggaccgcc tgctcgctcc gctcgcgatg tcccccccgg ggccccccac
     4141 gtggtgcccg ggccaagccc gctcaccacg tctgaccccc agcgcccctt cctggtcatc
     4201 ccggccgggg ggcggggact tcgcatgggc ggcggcctgc ccaaacagtt ccgggactgg
     4261 ggcggccgtc ccctcctccg ggccacc
//
LOCUS       DASUDT010000395         3370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1078891, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000395 DASUDT010000000
VERSION     DASUDT010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078891"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..958
                     /locus_tag="VFV26_08080"
     CDS             <1..958
                     /locus_tag="VFV26_08080"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HEX4846165.1"
                     /translation="GDAIDLSVRRLEGQAAWTLSPNLSLGVGLGVARLGFESGSAMRF
                     GVPLDPSQPVSGANPVQGLVEQRVAQSGNKVVPSYSLGFRWAISPRWTLGATHQSGLK
                     GDLGMKAAFQGASLGLYANDGLSVEPIGTAPRAAALLVASTPIPGGSATLELPSRTTV
                     GMRHRITPMITWEADLRWTSAGLQAPAFAQVATPSGIVSAPAELPQGKSHLGLSASVE
                     VELGKLWTLRGGLALEQRSVEEPVVEPLLGGAQTAAFSIGAGYRVFGGELNIGYQYRQ
                     SEDQFTRRLDGVWSSTGFRPTGTRVRIEGLGHLLALGFKKTF"
     gene            960..1706
                     /gene="rlmB"
                     /locus_tag="VFV26_08085"
     CDS             960..1706
                     /gene="rlmB"
                     /locus_tag="VFV26_08085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEX4846166.1"
                     /translation="MRYLGPHACEEALARGELHTVWIAPAAFGRMAKLVAEARAAGVV
                     IHREPMEGLDRRSQGQRHQGVLGEGGAFAYADFDEVVAQVKTKGDAALVLALDGVTDP
                     HNLGAILRSAAAAAVDGVILPERRSAAVNETVVRASAGTAGRVPVCRVVNLGRALDDL
                     KDAGAWIYGLAAGEGSRDYLREAFDRATVLVMGAEGEGLHLKIRERCDGLLHIPMPGG
                     IESLNVSAAAAVTLFRVLARRGSASPEVSP"
     gene            1864..1950
                     /locus_tag="VFV26_08090"
     tRNA            1864..1950
                     /locus_tag="VFV26_08090"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1898..1900,aa:Tyr,seq:gta)
     gene            2000..2075
                     /locus_tag="VFV26_08095"
     tRNA            2000..2075
                     /locus_tag="VFV26_08095"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2033..2035,aa:Gly,seq:tcc)
     gene            2143..2217
                     /locus_tag="VFV26_08100"
     tRNA            2143..2217
                     /locus_tag="VFV26_08100"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2175..2177,aa:Thr,seq:ggt)
     gene            2270..>3370
                     /gene="tuf"
                     /locus_tag="VFV26_08105"
     CDS             2270..>3370
                     /gene="tuf"
                     /locus_tag="VFV26_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX4846167.1"
                     /translation="MAKEKFDRSKTHVNIGTIGHVDHGKTTLTAAITFVLAKKFGGET
                     KSYDQIDSAPEEKARGITINTAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLARQVGVPYIVVFMNKVDIADPELTELVEMEIRDLLSSY
                     QYPGDDIPIVKGSARLALDHAETPDHPDCACIHELMAAVESYSPDPTRAIDKPFIMPV
                     EDVFTITGRGTVVTGRIEQGIVKVGEEIEIVGLKDTVKKVVTGVEMFRKSLDEGQAGD
                     NAGILLRGIERKDVERGQVLAKPGSITPHTKFTAQVYVLTKDEGGRHTPFFNKYRPQF
                     YFRTTDVTGSIELEAGREMVMPGDNVTLTVELI"
BASE COUNT          545 a         1190 c         1097 g          538 t
ORIGIN      
        1 gggggatgcc atcgacctgt ccgtccgccg cctggaaggg caggccgcct ggaccctcag
       61 ccccaacctc tccctgggcg tgggcctcgg cgtggcgcgc ctgggtttcg agtccgggag
      121 cgccatgcgc ttcggcgtac cgctggatcc ctcccagccc gtgtcggggg ccaatcccgt
      181 gcagggtctg gtggagcagc gcgtggccca gagcgggaac aaggtggttc ccagctactc
      241 gttgggcttc cgctgggcca tcagcccgcg ctggaccttg ggcgccacgc accagtccgg
      301 cctgaagggc gacctgggca tgaaggcggc tttccagggc gcgagcctgg gcctttatgc
      361 caacgacggg ctgagcgtcg agcccatcgg cacggccccc cgcgccgcgg ccctgctggt
      421 ggcttccact cccatcccgg gcgggagcgc gacactggaa ctgccttcgc ggactaccgt
      481 gggcatgcgc catcgcatca cgccgatgat cacgtgggag gcggacctcc gctggacatc
      541 cgctgggttg caggcgcccg ccttcgccca ggtggcgacg ccatcgggca tcgtatcggc
      601 acccgccgag ctgccccagg gcaagagcca cctgggtctc agcgcctcgg tggaagtgga
      661 gctcggaaag ctctggactc tgcgcggcgg cctcgccctg gagcagcgct ccgtggagga
      721 gccggtggtc gagcccctgc tgggcggcgc ccagacggcg gccttctcca tcggcgccgg
      781 ctatcgggtc tttggcggcg agctgaacat cggctaccag taccgccaga gcgaggacca
      841 gttcacgcgc cggctcgatg gcgtgtggag ctccaccggc ttccgcccca cgggcactcg
      901 cgtgcgcatc gagggtctgg ggcacctcct ggccctgggt ttcaagaaga ccttctagga
      961 tgcgatacct cggcccccac gcctgcgagg aggccctggc ccgcggcgag ctgcacacgg
     1021 tttggatcgc ccccgccgcc ttcggccgga tggcgaagct cgtggccgag gcccgcgccg
     1081 cgggcgtggt gatccaccgc gaacccatgg agggcctgga tcggcgcagc cagggccagc
     1141 gccaccaggg cgtgctgggc gagggcggtg ccttcgccta tgccgatttc gatgaggtgg
     1201 ttgcccaggt gaagaccaag ggcgacgcgg cgctggtgct ggccctggac ggcgtcaccg
     1261 acccccacaa cctgggcgcc atcctgcgct ccgccgcggc ggcagccgtg gacggcgtga
     1321 tcctgcccga gcggcgctcc gccgccgtga acgagaccgt ggtgcgcgcc agcgccggca
     1381 cggcgggccg cgtgcccgtc tgccgcgtgg tgaacctggg ccgcgccctg gacgacctga
     1441 aggatgccgg ggcctggatc tacgggctgg cggcgggcga gggcagccgc gactacctgc
     1501 gggaggcctt cgaccgggcc acggtgctgg tcatgggtgc ggagggggag ggcctgcacc
     1561 tcaagatccg cgaacgctgc gatgggctgc tgcacattcc catgcccggg gggatcgaga
     1621 gcctgaacgt ctccgccgcc gcggcggtca cgcttttccg cgtccttgca cgccggggat
     1681 ccgcttcgcc ggaagtttcc ccttgagggg cttccgttgc cgtgatacct ttcgagttcc
     1741 ctgtcaggaa agccctgcct cgcagcgccc ctgacatgga gccccgaaag gggttccggg
     1801 agacatttct aggagtgtct cagggtgcat tgacaagccc cgggaggggc gctggacaag
     1861 catgccgaga tggccgagtg gttaatggca gcagactgta aatctgccac gcatcgcgtt
     1921 acggaggttc gaatccttct ctcggcacca gtcccctggg cttttccagg gcgctggatc
     1981 ccgtcctcag ggtttccccg cgggaatagc tcagttggta gagcgtcagc cttccaagct
     2041 gaatgtcgcg ggttcgaacc ccgtttcccg ctccaccctc cccgtccgcc ggatccgccc
     2101 ggtggatgga aggccccccg cctcttggcg ggaaggttca aagcccacat agctcagcgg
     2161 tagagcactt ccttggtaag gaagaggtca ccggttcaag cccggttgtg ggctccaccc
     2221 tttcgcaaag tcccccttca tcttctctcc cacctttctg gaggcacccg tggccaaaga
     2281 gaaattcgac cgttccaaaa cccacgtcaa catcggcacc atcggccacg tggaccacgg
     2341 caagaccacg ctgacggcgg ccatcacctt cgtgctggcc aagaagttcg gcggcgagac
     2401 caagtcctac gaccagatcg actccgcgcc cgaagagaag gcccgcggga tcacgattaa
     2461 caccgcccac gtcgagtacc agaccgagaa gcgccactac gcgcacgtcg actgccctgg
     2521 ccacgccgac tacgtgaaga acatgatcac cggcgcggcc cagatggacg gcgccatcct
     2581 cgtggtcgcc gccaccgacg gccccatgcc ccagacccgt gagcacatcc tgctcgcccg
     2641 tcaggtcggc gtgccctaca tcgtcgtctt catgaacaag gtggacatcg ccgaccccga
     2701 gctcaccgag ctggtcgaga tggaaatccg cgacctcctg tcctcctacc agtaccccgg
     2761 cgacgatatc cccatcgtca agggttccgc ccgtctggcc ctggaccacg ccgagacccc
     2821 ggatcatccg gactgcgcct gcatccatga gctcatggct gccgtcgagt cctacagtcc
     2881 cgatcccacc cgcgccatcg acaagccctt catcatgccc gtcgaggacg tgttcaccat
     2941 caccggccgc ggcaccgtgg tgaccggccg catcgagcag ggcattgtga aggtgggcga
     3001 ggaaatcgag atcgtcggcc tcaaggacac cgtgaagaag gtcgtcaccg gcgtcgagat
     3061 gttccgcaag tccctcgacg agggccaggc gggtgacaac gccggcatcc tcctgcgcgg
     3121 catcgagcgc aaggacgtgg agcgcggcca ggtgctggcc aagcccggct ccatcacgcc
     3181 ccacaccaag ttcaccgccc aggtgtacgt gctgacgaag gacgagggcg gccgccacac
     3241 ccccttcttc aacaagtacc gcccccagtt ctacttccgc accaccgacg tgaccggttc
     3301 catcgagctc gaggctggcc gcgagatggt catgcccggt gacaacgtca ccctgacggt
     3361 ggagctcatc
//
LOCUS       DASUDT010000396         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_349401, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000396 DASUDT010000000
VERSION     DASUDT010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349401"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /locus_tag="VFV26_08110"
     CDS             complement(<1..672)
                     /locus_tag="VFV26_08110"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX4846168.1"
                     /translation="MTIHVLDQLPLWVEGDLATAEMAAVDRHLGDCPACRAAADRLRT
                     SQAWLREALAPPFDAGDHESLRHRVMDQIRAERRPSERRLRTRPALLAACAAILLVAT
                     LTWRQERPAPGPPAPMAALKSNPEPAPEAPSLARAEPARIAPRSARPPMAVAPADTPP
                     EAPARIEFQTAAHHPHHLAGPGQAPSRSESAHPGGTMNALLALTLAALLAPALPAQTP
                     PTAPAP"
     gene            complement(669..1301)
                     /locus_tag="VFV26_08115"
     CDS             complement(669..1301)
                     /locus_tag="VFV26_08115"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX4846169.1"
                     /translation="MVPGIEAVLMEEGLSPFPEAPAEDPLEPLIRRIRSGEIEAFGEL
                     MARTEGRVLALAWRMLGDRHLAEDAAQETYLRVFRSLDSFRLGEPFDAWVIRIAVNVC
                     CDLARKRGPAPAPVESLEALEGDAAPMGAEEAVLLHQRRRLMRQAVAALPPAERAALV
                     LRDLEGLSTEEAARVLGVRPVTVRSQAASARAKVQAFCARLLKPTHGGRP"
     gene            complement(1656..1997)
                     /locus_tag="VFV26_08120"
     CDS             complement(1656..1997)
                     /locus_tag="VFV26_08120"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HEX4846170.1"
                     /translation="MSREPRLYIEDILEAIRRVRLLTAGMDPTQFREDWRAQDATLRN
                     LEILGEAVKHLPGALTALHPEVAWKNIAGFRDFLAHAYFGVDDQIVWDIITTKLDPLE
                     AAVRTFLRQLP"
     gene            complement(1987..2280)
                     /locus_tag="VFV26_08125"
     CDS             complement(1987..2280)
                     /locus_tag="VFV26_08125"
                     /inference="COORDINATES: protein motif:HMM:NF014021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX4846171.1"
                     /translation="MNPESTLQRLREAFPGLRQRFALAHLGVFGSVARGTAGPDSDVD
                     ILVEFEGPATLDGFMGLKEELEHLLGVRVDLATPRSLRPSLLALVKKDLRDVA"
     gene            complement(2398..>3405)
                     /locus_tag="VFV26_08130"
     CDS             complement(2398..>3405)
                     /locus_tag="VFV26_08130"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HEX4846172.1"
                     /translation="SPKLAVRTERSLAGSMIAVGLVTSMVGTMAFLSFGLGIKQALMP
                     ALTATLVVMVISFFFAPVAARAIATIGTNPISGMTMLTLVITGVLMLKLNFTGGYGMF
                     LTMMVGGIVCTALAASGAFATDLKIGHWIGATPARQIAWKFAGTFVAALFTGIAMWLM
                     AKQVNLDGTMALGSSIPAPQASAMKAILEGIFGTVSMPLRWYAFGLGVMLSIVLRMVE
                     LPALGFALGMYLPIELNTPLFLGGLLAHWVNRPKAGTTEADAKARENRGVLIASGLMA
                     GGAIMGVVASFVKLKWTEGFPLLTAHQAEGALGEWLGIGALIALCLYVVVYSRQAKGE
                     A"
BASE COUNT          562 a         1042 c         1289 g          512 t
ORIGIN      
        1 gggcgcaggc gcagtcgggg gcgtctgagc ggggagggcc ggggccagca gggcggcgag
       61 agtgagggcg agaagggcgt tcatggttcc tcctgggtgg gcggattcgc ttcgggaagg
      121 ggcctggcct gggccagcca gatgatgcgg atggtgggcg gcggtctgga attcgatgcg
      181 cgcgggggct tcgggcgggg tatcggccgg tgcgacagcc atgggggggc gtgcggaccg
      241 cggggcgatc cgcgccggtt cggcacgggc cagggaaggc gcttccggtg cgggttccgg
      301 gttggatttg agggcggcca tgggcgcggg tgggccgggc gcgggccgtt cctggcgcca
      361 ggtgagggtg gccacgagca ggatcgcggc gcaggcggcg aggagggcgg ggcgggtgcg
      421 gagtcggcgc tcggaggggc ggcgctccgc tcggatctga tccatcaccc ggtggcggag
      481 ggactcgtgg tccccggcat cgaagggcgg ggccagggcc tcccgcagcc aggcctggct
      541 ggtgcgcagg cgatcggcgg cggcccggca ggcggggcag tcgccaaggt ggcggtcgac
      601 ggcggccatc tcggcggtcg cgaggtcgcc ttcgacccac agggggagct gatcaaggac
      661 gtggatcgtc atgggcgtcc tccatgggtg ggtttcagca ggcgggcgca gaaggcctgg
      721 accttggccc gggccgaggc ggcctgggag cggacggtga cggggcggac ccccaggacg
      781 cgggccgcct cttccgtgga gaggccctcc aggtcccgca gcacgagggc ggctcgttcg
      841 gccgggggaa gcgcggccac ggcctgtcgc atcaacctgc ggcgctggtg gagcaggacg
      901 gcttcctcag cgcccatggg cgcggcatcc ccttcgaggg cttccaggga ttccacgggc
      961 gcgggcgcag ggccccgttt ccgtgccagg tcgcagcaga cgttcacggc gatgcggatc
     1021 acccaggcgt cgaagggttc gcccaggcga aaagagtcca acgaacggaa cacgcggagg
     1081 taggtctcct gggccgcatc ctcggccagg tgccggtccc cgagcatccg ccaggccagg
     1141 gccaggaccc ggccttcggt gcgggccatc agttccccga aggcttcgat ttcgcccgag
     1201 cggatgcgcc ggatcagggg ctccagcgga tcctctgccg gggcctccgg aaagggggag
     1261 agtccctctt ccatcagcac ggcctcgatc ccaggaacca cgtcacgctt cctccctcac
     1321 ctatccatac cgggggcgcg gggaaagtgt tgattcgaaa atcggaaaag aggacggaat
     1381 caggaaagcg gagggaaacg gagatgcgga gggtagcgga gcgatgaata ggtcttcccg
     1441 cttccgcttc cctccgcccc tctgctctcc tccgcctttc aactgcttta cggcgaacta
     1501 aacctcgccc ttggcccggc ggctgtagac gaccccgcag agggtatcca ccccagggga
     1561 cgacgccata aaaattccag catcgaggga acgaccgctg tgggtagggc atgtgcgcga
     1621 tcgttccatc tgttcacagc acgctgggag aagcatcagg gcagttggcg gagaaatgtt
     1681 cggacggctg cttcaagggg atccagtttg gtggtgatga tgtcccagac gatctggtcg
     1741 tccaccccga agtaggcgtg ggccaggaag tcgcggaagc ccgcgatgtt cttccaggcc
     1801 acctccggat gaagggcggt cagggccccg ggcaggtgct tgacggcttc acccaggatc
     1861 tccaggttgc gcagcgtggc gtcctgggcc cgccagtcct cacggaactg ggtgggatcc
     1921 atgcccgccg tgagcaggcg cacccggcgg atggcctcaa ggatgtcctc gatatagagc
     1981 ctgggctcac gcgacatcgc ggaggtcttt cttcaccagg gccagcaggg acggccgcag
     2041 gcttcgcggt gtggccagat ccacccggac accgaggagg tgttccagtt cctccttcag
     2101 gcccatgaat ccgtccaggg tggccgggcc ttcaaactcc accagaatgt ccacatctga
     2161 atccgggcct gccgtacccc gggccacact gccgaagacg cccaggtgcg ccagggcaaa
     2221 ccgctgccga agacccggga aggcctcgcg cagtcgctgg agggtggatt ccgggttcat
     2281 gtcctgctcc ggcgtggagt ataaggtacg cgaacgcggg tggaaaagcc ttacccctct
     2341 gtccgggacc gccgaagtcg attccgggca gagaagaaag gatggggtgg ggccagccta
     2401 agcctcgccc ttggcctggc ggctgtagac gacaacgtag agacacagcg cgatcagtgc
     2461 cccgatgccg agccactcgc ccagggcccc ttcggcctgg tgggcggtga ggagggggaa
     2521 gccctcggtc cacttcagct tcacgaagct ggccaccacg cccatgatgg cgccgccggc
     2581 catgaggccg ctggcgatga gcacaccgcg gttctcgcgg gccttggcat cggcttcggt
     2641 cgttccggcc ttgggccggt tcacccagtg ggccagcagg ccgcccagga acagcggcgt
     2701 gttcagctcg atggggaggt acatgcccag ggcgaagccc agggccggta gttccaccat
     2761 gcgcagcacg atggagagca tcacgccgag gccgaaggcg taccagcgca ggggcatgga
     2821 cacggtgccg aagatgcctt cgaggatggc cttcatggcg ctggcctggg gggcggggat
     2881 ggagctgccc agggccatgg tgccatccag gttcacctgc ttggccatga gccacatggc
     2941 gatgcccgtg aagagggctg ccacgaaggt gccggcgaac ttccaggcga tctgccgggc
     3001 gggcgtggcg ccgatccagt ggccgatctt caggtcggtg gcgaaggcgc cggaggccgc
     3061 cagggccgtg cacacgatgc cgcccaccat catggtgagg aacatgccgt agccgccggt
     3121 gaagttcagt ttgagcatca gcacgccggt gatgacgagg gtcagcatgg tcatgccgct
     3181 gatggggttg gtgccgatgg tggcgatggc gcgggccgcc accggggcga agaagaagga
     3241 gatgaccatc accacgaggg tggccgtgag ggcgggcatc agggcctgct tgatgccgag
     3301 gccgaagctg aggaaggcca tcgtgcccac catgctggtg acgaggccca cggcgatcat
     3361 ggagcccgcc aggctgcgct ccgtgcggac ggccagcttg ggtga
//
LOCUS       DASUDT010000397         4438 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2161161, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000397 DASUDT010000000
VERSION     DASUDT010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4438
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2161161"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1308
                     /gene="nadE"
                     /locus_tag="VFV26_08135"
     CDS             <1..1308
                     /gene="nadE"
                     /locus_tag="VFV26_08135"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEX4846173.1"
                     /translation="AFRGQRIGLSICEDLWADPQLGNAPVDYGIDPIADLAAGGATLI
                     LNASASPSGLGSYLPPGRSAPWAIPSKDAQRRRLLPGLAQKHGVPIAYASRVGAESWL
                     LFDGGSGLALPDGRWQGSAPFHEGTLLVDAGLPGEAWRTVEDGAWLRTALVAGIRDNL
                     AKQGLEAVVLGLSGGIDSAVAAALAVEALGPGRVLGAAMPTRFSSGESADLAQQQARH
                     LGIPFLSLDADAPFAGFAAALGQALPGRSFGLTDENLQSRSRGSLLMALTSEPEIHRR
                     LGTDRVAVLNTGNKSEAATGYFTLYGDGIGAFAPLGDCLKARVYAVARELGAAVPRGV
                     MERPPTAELRPGQTDEASLLPYAQLDAILGAALEAQRPAETLPDDLASLLDGEALLQA
                     RAALPRILGLLHRTEFKRRQLPFAFKVSPKAFGAGRRIPLTAL"
     gene            1392..1478
                     /locus_tag="VFV26_08140"
     tRNA            1392..1478
                     /locus_tag="VFV26_08140"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1425..1427,aa:Leu,seq:caa)
     gene            1636..2040
                     /locus_tag="VFV26_08145"
     CDS             1636..2040
                     /locus_tag="VFV26_08145"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEX4846174.1"
                     /translation="MELTWHSRYNTGIQIIDEQHQELFATVDKLRGSVQDGGDRAAIE
                     GLLAALVQHSERHFATEESFMARYGYPDLPQHMAEHASMLTSLHELLGKFRESHHTLA
                     LMVPTFMEGWLKHHISDGDFGFVTFLKSRNLA"
     gene            2233..>4438
                     /locus_tag="VFV26_08150"
     CDS             2233..>4438
                     /locus_tag="VFV26_08150"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX4846175.1"
                     /translation="MTRRWTTLTLTALACATVASAQTSSTAGAVRGIVKNKAGQVVAN
                     ASLSLRNRETGLVRTAATGSQGDYHIGLLPVGSYELTVAAPGMRTLKDTSVQVSLGQN
                     TIANFSLDMAEASAMVEIVASAQSLDTTQVNSITSVDQKLVETIPINGRNFTDLALLT
                     PGATDAQDNRVSMDGARGIQNNLTIDGASFNSSFFGEQRGSTRIPFAFGADTIKELQV
                     ISNAYDAQYGNAAGAVINAVSKTGTNTFSGSALYQIRPENTVAKIRPVPYDPRGTVNS
                     EKARTKKFSQYSFNLNVGGPIIKDRLHFFAGVETYKYKEDYTSIFPVSATPGNTAADL
                     TNFLNILGNQLVVGGGGRTFAQENGHGYSNERTNTVFFGRLDWTINPDHRATLRVNSQ
                     NWKSVNGTTTGTSTLTTGETNNGLEENRSISWVAELNSTLSSSLFNEARLQFATERRP
                     RTPNSTASSEISVGGFRAGQNEFLPNGLDEFGIQFIDNLTWVKDDWTFKAGVDLQDFT
                     YRNHFYRRQNGQWFFSTYNAAYQWMLGLPATGFGTINYQQGVSGTDGRIDFGGQLQAF
                     YAQAQYAGLLEKRLNLTLGLRHTRETWDDNPRPNAALLGLDKAADSTATDPRFGFSLD
                     LFGNGKSVLRGGYGWFSSPNAALTVSNTMLGNGNGVRNYFVAASGANLAHFQTGGLLS
                     AGQRISADDRLVRVDPATMSSTFSAGTIVAQLWDPDNKMPQARRMSLGYEQEM"
BASE COUNT          795 a         1578 c         1378 g          687 t
ORIGIN      
        1 gccttccgcg gccagcgcat cggcctgtcc atctgcgagg acctgtgggc ggatccgcag
       61 ctgggcaacg cgcctgtgga ctacgggatc gatcccatcg cagatctggc ggcgggggga
      121 gccacgctga tcctcaatgc cagcgccagc cccagcgggc tgggcagcta cctgccgccg
      181 ggccgcagcg ccccctgggc catcccgtcg aaggacgccc agcggcgccg cctgctgccg
      241 gggctggccc agaagcatgg cgtgcccatc gcctacgcca gccgcgtggg ggccgaaagc
      301 tggctgctct tcgatggcgg gtcgggcctg gcactgccgg acgggcgctg gcagggctcc
      361 gcgcccttcc acgaaggcac actcctggtg gatgcgggcc tgcccggcga agcctggcgg
      421 acggtggagg atggagcctg gctgcggacg gccctggtgg caggcatccg cgacaacctg
      481 gccaagcagg gcctcgaagc ggtggtgctg gggctttccg gcggcatcga cagcgccgtg
      541 gccgcggccc tggccgtgga ggccctgggg cccggccgcg tgctgggtgc agccatgccc
      601 acgcggttca gcagcgggga gagcgcggat ctggcgcagc agcaggcccg gcatctcggc
      661 atccccttcc tgagcctcga tgccgatgcg cccttcgcgg gattcgccgc ggcgctgggg
      721 caggccctgc cggggcgcag cttcggcctc acggacgaga acctgcagag ccgcagccgg
      781 ggcagcctgc tcatggccct cacctcggag ccggagatcc accggcgcct cggcaccgat
      841 cgcgtggccg tgctgaacac gggcaacaag agcgaggcgg ccacgggcta cttcaccctc
      901 tacggcgatg gcatcggtgc cttcgcgccc ctgggggact gcctcaaggc ccgggtctac
      961 gcggtggccc gggaactggg cgcggcggtg ccgcgcggcg tgatggagcg cccgcccacg
     1021 gcggagctgc gcccgggcca gaccgacgag gcgagcctgc tgccctatgc gcagctggac
     1081 gccatcctgg gggcggccct ggaggcccag cggcccgcgg agacgcttcc ggacgacctg
     1141 gcctcgctgc tggacggcga ggcgctgctc caggcccggg ccgccctgcc gcgcatcctg
     1201 ggcctgctcc accgcaccga gttcaagcgc cgccagctgc ccttcgcatt caaggtgagc
     1261 cccaaggcct tcggcgcggg gcggcggatc ccgctcactg cgctgtagct gctcaagggg
     1321 ccgcaccgct cccatccgca tcgggttgcg gctttgaaaa cccgcgccgc cgcgataccc
     1381 tgaggtttct ggccggtgtg gcgaaatggc agacgcgacg gactcaaaat ccgtttcccc
     1441 ctaaaggagt gtcggttcga gtccgaccac cggtaccagg atccgaaaga attcgcccag
     1501 ggtttccctt gatcagaaga tgcctggacc ttacagtcat ctggcagctc tctgttccag
     1561 ttgtttcgcc aggtccgcgt ggcgagtgac acaccccgga atccaccgat tgctttcgcc
     1621 aaaaggaccc agctcatgga gctcacgtgg cattcccgtt acaacacggg catccagatc
     1681 attgatgaac agcaccagga gctcttcgcc acggtcgaca aactgcgggg ttccgtccag
     1741 gacggagggg accgggcggc catcgaaggc cttctggcgg cgcttgtcca gcattccgag
     1801 cgccacttcg ccaccgagga atccttcatg gcgcgctacg gctatccgga cctgcctcag
     1861 cacatggccg agcacgcctc catgctcacg agcctccacg agctgctggg caagttcagg
     1921 gaaagccacc acaccctggc cctgatggtt ccgaccttca tggagggctg gctgaagcat
     1981 cacatcagcg atggcgattt cggattcgtg accttcctga agtcccggaa tctcgcctga
     2041 gccgtcggcc caggttttgg cgatccggtc aggaaaccga taatttccga caactttcct
     2101 cctgcaaaaa gccacttgag ccattcgccc aggatcggag atccttgggg tttcccctgc
     2161 tacgagtcca cacaggacct cgggaccggc aatacatcca ttgatggcca gaacctggcc
     2221 aaggagcgac gcatgactcg acgctggaca acccttacgc tgacggctct ggcctgcgcc
     2281 acggtcgctt ccgcacagac ctcctccacc gcgggcgcgg tgcggggcat cgtcaagaac
     2341 aaggctggcc aggttgtggc caacgccagc ctctctctgc ggaaccggga gacgggcctg
     2401 gtgcgcaccg cggccaccgg ttcccagggt gactaccaca tcggtctcct gccggtgggt
     2461 tcctacgagc tcaccgtcgc cgctccgggc atgcgcaccc tcaaggacac cagcgtgcag
     2521 gtgtccctgg gccagaacac catcgcgaac ttcagcctgg atatggctga agcctccgcc
     2581 atggtggaga tcgtcgcctc agcccagtcc ctggacacca cccaggtgaa cagcatcacc
     2641 tcggtggatc agaaactggt ggagaccatc cccatcaacg gccggaactt cacggatctg
     2701 gccctcctga cgcccggcgc caccgatgcc caggacaacc gcgtctccat ggacggtgcc
     2761 cgcggcatcc agaacaacct caccatcgac ggggccagct tcaactccag cttcttcggc
     2821 gaacagcgcg gctcgacccg catccccttc gccttcggcg ccgacaccat caaggaactg
     2881 caggtcatct ccaacgccta tgacgcccag tacgggaacg ccgccggagc cgtcatcaat
     2941 gcggtctcca agaccggcac gaacaccttc tccggcagcg ccctgtacca gatccgtccg
     3001 gaaaacacgg tggccaagat ccgccccgtg ccctatgacc cccggggcac ggtgaactcc
     3061 gagaaggccc ggacaaagaa gttcagccag tacagcttca acctgaatgt cggcggcccg
     3121 atcatcaagg acagactgca cttcttcgcg ggtgtggaga cctacaagta caaagaggac
     3181 tacacctcga tcttcccggt gagcgccacg ccaggcaaca cggcggcgga cctgaccaat
     3241 ttcctcaaca tcctgggcaa ccagctggtg gtgggcggtg gtggccgcac cttcgcccag
     3301 gagaatggcc acggctacag caacgagcgc accaatacgg tgtttttcgg acgcctggac
     3361 tggaccatca accccgacca ccgggccacc ctgcgggtga acagccagaa ctggaaatcg
     3421 gtgaatggca ccacgacggg taccagcacc ctcaccaccg gcgagaccaa caacggcctc
     3481 gaggagaacc gcagtatttc ctgggtggcg gagctgaatt ccaccctctc cagcagcctc
     3541 ttcaacgagg cgcgcctcca gttcgccacg gagcgccggc cccgaacccc caactccacc
     3601 gcctcctccg agatctccgt ggggggcttc cgggccggcc agaacgagtt cctgcccaac
     3661 ggccttgacg aattcggcat ccagttcatc gacaacctca cctgggtgaa ggatgactgg
     3721 accttcaagg ccggtgtgga cctccaggac ttcacgtacc ggaaccactt ctaccgccgc
     3781 cagaacggcc agtggttctt cagcacctat aatgcggcct accagtggat gctggggctg
     3841 ccggccaccg gcttcggcac catcaactac cagcagggcg tgagcggcac cgatggccgc
     3901 atcgatttcg gcggccagct ccaggccttc tacgcgcagg cccagtacgc gggcctgctg
     3961 gagaagcgct tgaacctcac cctcggcctc cgccacacgc gcgaaacctg ggacgacaat
     4021 cccaggccga atgcggcgct tctggggctg gacaaggctg cggacagcac cgccacggat
     4081 ccccgcttcg gcttctccct ggatctgttc ggcaacggca agagcgtcct gcgtggcggc
     4141 tacggctggt tctccagccc caacgccgcg ctcaccgtat cgaacaccat gctggggaat
     4201 ggcaacggtg tccggaacta cttcgtagcc gccagcgggg cgaacctggc ccacttccag
     4261 accggcggcc tgctctccgc ggggcagcgc atcagcgccg acgaccgcct ggtgagggtg
     4321 gaccccgcca ccatgagctc gaccttctcc gccgggacca tcgtggccca gctctgggac
     4381 cccgacaaca agatgcccca ggcccgccgc atgagcctcg gttacgagca ggagatga
//
LOCUS       DASUDT010000398         3586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1387800, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000398 DASUDT010000000
VERSION     DASUDT010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1387800"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..1630)
                     /gene="lpdA"
                     /locus_tag="VFV26_08155"
     CDS             complement(227..1630)
                     /gene="lpdA"
                     /locus_tag="VFV26_08155"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX4846176.1"
                     /translation="MASFDLLVIGSGPGGYIAAIRAAQLGLNTAIVEKDPALGGTCLH
                     RGCIPAKTWLESAHRFEQMQVADDYGIDGVDVKALKANLATIVKRKGRIVFKNAKGIE
                     FLMKKNKVTVLKGFGKLLGGGRVDVAGEVHEAKRIILATGSAPKPIPGLETDGVRVLN
                     SDHILDLTELPSHLVILGAGAIGVEFASVFSRLGAKVTLVEFMDTILPLEDEDIGLEL
                     AKIFRKSYKMDVRTRTKITRIEKREDGVVCHLEGEAPGEVVGSHLLVAVGRAPMVDGI
                     GLEKTKAQVDRGCVVIDKYMQTGEPGLYAIGDIVRTPWLAHVASDEGIVAAEHAAQSL
                     GKDVHPHPVRYDRFPACTYCDPEVGTIGLNEKAAKAKGYDVQVGTFPFAPMAKANIVG
                     EPHGFIKIVADKQYGEILGIHILGPKATELVASSVALMGGEFTVDELIHTMYPHPSLN
                     EVFPEAARAVYGRALNM"
     gene            complement(1703..2854)
                     /locus_tag="VFV26_08160"
     CDS             complement(1703..2854)
                     /locus_tag="VFV26_08160"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HEX4846177.1"
                     /translation="MALAKRWNLLNTTFLTGTLALALALVPWRLATSGLQWSEALVFL
                     AMTFAIGTAISGGYHRLFSHRAYRASWPVRFLFLCFGAAAFENSALKWASDHRVHHQH
                     VDTDQDPYTIGKGFWYAHWTWVMEAKALPLAGVADLEKDPLVRWQHRHHFLIGAVVAT
                     IPLWIGLATGNVLGHLVFGVALRIVATHHTTFFINSAAHMFGSRPYTDANTARDNWLL
                     APLTYGEGYHNFHHLWQWDYRNGALWYQWDTTKWLLNLLGWMGLVGQFRRVSAAAMTR
                     ARLHMEEKRLKERLALTSPGVATPMQARLAAARLKLDAALAALHDRHEAWQLKKAEWR
                     AKGLAKAEAWREAKAEWEATAALHRAELKAAWAEWKAARLEVRSALVYA"
     gene            2949..>3586
                     /locus_tag="VFV26_08165"
     CDS             2949..>3586
                     /locus_tag="VFV26_08165"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX4846178.1"
                     /translation="MTKHRGLSGPTRILIGLLAGLALGLLAKFLAGGHPWLDALIRNA
                     IEPVGRMWLGSLIMVVIPLILSTLALGVAGLGDLKRLGRVGLVTLICFLGLTTLSTAL
                     GLGAMNLLEPGKSLNPAVKTQLMETYKGDSAQMAEKMGLSQSSFDINLLVNIVPRNPL
                     KSAAAGDMLAVIFFALVLGAALARLPKEKGEPLIKVLESLGEAMVSIIDMVM"
BASE COUNT          537 a         1178 c         1241 g          630 t
ORIGIN      
        1 tcttgactcc acagccctaa ccctccggtc aacttggccc ctgtctgcat gtagtttcgc
       61 tttttttggt ttctcgcttc ctcggccccg ctcagcgcct cggcgcaggc gcggccgctt
      121 agcgtcatcc gttaatctcc aattcgccca cctacgaaaa accgcccatg ctgggcggtt
      181 tttcgcttgt tcgagcctta tgggtcgcgc ctgatcaagc ggcagcctac atgttcagcg
      241 cccgcccata caccgcccgc gccgcctcgg ggaagacctc gttgaggctg gggtggggat
      301 acatggtgtg gatgagctca tccacggtga actcgccgcc catgagggcc acgctggagg
      361 ccaccagctc cgtggccttg gggcccagga tgtggatgcc gaggatctcg ccgtactgct
      421 tgtccgccac gatcttgatg aagccgtggg gctcgcccac gatgttggcc ttggccatgg
      481 gggcgaaggg gaaggtgccc acctgcacat cgtagccctt ggccttggcg gccttttcgt
      541 tgaggccgat ggtgcccact tcgggatcgc agtaggtgca ggcggggaag cggtcgtagc
      601 gcacggggtg gggatgcacg tccttgccca ggctctgggc ggcgtgctcg gcggccacga
      661 tgccctcgtc gctggccacg tgggccagcc agggggtgcg cacgatgtcg ccgatggcgt
      721 agaggccggg ctcgccggtc tgcatgtact tgtcgatgac cacgcagccc cggtccacct
      781 gggccttggt cttctccagg ccgatgccgt ccaccatggg cgcgcggccc acggccacca
      841 gcaggtggct gcccaccacc tcgccgggcg cttcgccctc caggtggcac accacgccat
      901 cctcccgctt ctcgatgcgg gtgatcttgg tgcgcgtgcg cacgtccatc ttgtagctct
      961 tgcggaagat cttggccagc tcgaggccga tgtcctcgtc ctccaggggc aggatcgtgt
     1021 ccatgaactc caccagcgtg accttggcgc ccaggcggct gaacaccgag gcgaactcca
     1081 cgccgatggc gccggcgccc aggatcacca ggtggctcgg cagctcggtg aggtccagga
     1141 tgtggtcgct gttgagcacg cggacgccat ccgtctccag gccggggatg ggcttggggg
     1201 cggaacccgt ggccaggatg atgcgcttgg cctcgtggac ttcgcccgcc acgtccacgc
     1261 gcccgccgcc cagcagcttg ccgaagccct tgagcaccgt caccttgttc ttcttcatga
     1321 ggaactcgat gcccttggcg ttcttgaaga cgatgcggcc cttgcgcttc acgatggtgg
     1381 cgaggttggc cttcagcgcc ttgacgtcca cgccgtcgat gccgtagtca tcggccacct
     1441 gcatctgctc gaagcggtgg gcgctctcca gccaggtctt ggcggggatg cagccgcggt
     1501 ggaggcaggt gccgcccagg gcgggatcct tctccacgat ggccgtgttc aggcccagct
     1561 gggcggcgcg gatggccgcg atgtagccgc cggggccgga gccgatgacg aggaggtcga
     1621 aagaagccat gctgcgctcc agagaacggg gaaggtccag gtgggagccc catgatccca
     1681 cattgccggg gctggatcgg acctaggcgt acaccagcgc agaccgcact tccaggcggg
     1741 ccgctttcca ctcggcccag gccgccttca gttcggcgcg atgcagggcg gcagtggcct
     1801 cccattcggc cttggcttcc cgccaggctt cggccttggc caggcccttg gcgcgccatt
     1861 cggctttctt cagctgccag gcttcgtggc ggtcgtggag ggcggccagg gccgcatcca
     1921 gcttcaggcg cgcggcggcg aggcgggcct gcatgggcgt ggccacgccg gggctggtca
     1981 gggccagccg ctccttcagg cgcttctcct ccatgtgaag gcgggcccgg gtcatggcgg
     2041 cggcggagac gcgccggaac tggcccacca gccccatcca gcccaggagg ttcagcagcc
     2101 acttggtggt gtcccactgg taccagaggg cgccgttgcg gtagtcccac tgccagaggt
     2161 ggtggaagtt gtggtagccc tcgccgtagg tgaggggggc cagcagccag ttgtcgcggg
     2221 cggtgttggc gtcggtgtag gggcggctgc cgaacatgtg ggcggcgctg ttgatgaaga
     2281 aggtggtgtg gtgggtggcc acgatgcgca gggccacgcc gaagacgagg tggcccagga
     2341 cgttgcccgt ggccagtccg atccagaggg ggatggtggc caccacggcc ccgatgagga
     2401 agtggtggcg gtgctgccag cgcaccaggg gatccttctc caggtccgcc acgccggcga
     2461 ggggcagggc cttggcctcc atgacccagg tccagtgggc gtaccagaag cccttgccga
     2521 tggtgtaggg atcctggtcc gtgtccacgt gctggtggtg cacccggtgg tcgctggccc
     2581 acttgagggc ggagttctcg aaggcggccg cgccgaagca caggaacagg aagcgcacgg
     2641 gccaggaggc ccggtaggcc cggtggctga agagccggtg gtagccgccg ctgatggccg
     2701 tgccgatggc gaaggtcatg gcgaggaaga ccagcgcctc gctccactgg aggcccgagg
     2761 tggccagccg ccagggcacc agcgccagcg ccagggccag ggtcccggtg aggaaggtcg
     2821 tattcagcag gttccagcgt ttggccaggg ccattccatt gactccaaaa cagagttcaa
     2881 ttctacaggg ggttcctagc ccgcgtccca tgccaaactt gccggactcc cggacgaggt
     2941 agaaacccat gacaaagcat cgaggcctgt cgggccccac gcgcatcctc atcggcctcc
     3001 tggccggcct ggccctgggc ctgctggcga aattcctggc gggaggacac ccctggctgg
     3061 acgccctcat ccggaacgcc atcgaacccg tgggccgcat gtggctgggc tcgctgatca
     3121 tggtggtgat ccccctgatc ctctccaccc tggccctggg cgtggcggga ctgggcgacc
     3181 tgaagcgcct gggccgcgtg gggctcgtga ccctgatctg cttcctgggc ctcacgaccc
     3241 tgtccacggc cctgggcctg ggcgccatga acctgctgga gccggggaag agcctgaacc
     3301 cggccgtcaa gacccagctc atggagacct acaaggggga ctccgcccag atggccgaga
     3361 agatgggcct ctcccagtcc agcttcgaca tcaacctgct ggtgaacatc gtgccccgca
     3421 accccctcaa gtccgcggcc gcgggggaca tgctggcggt catcttcttc gccctggtgc
     3481 tcggggccgc cctggcccgc ctgccgaagg agaagggtga acccctgatc aaggtgctcg
     3541 aaagcctggg cgaagccatg gtctcgatca tcgacatggt catgaa
//
LOCUS       DASUDT010000399         6714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1277705, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000399 DASUDT010000000
VERSION     DASUDT010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6714
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277705"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VFV26_08170"
     CDS             complement(<1..851)
                     /locus_tag="VFV26_08170"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX4846179.1"
                     /translation="MTTFRAPWQDPNLYPPARLKDGRMGVWHDGQVEPMTLAGIVLGV
                     SQDLGGEKPSGPGISLVEMPGEDRVVDVVDLPEVQRAMAHHLDDSLSRDIQQQGWIAW
                     LLGPLILAGTLAGLNIGYFSIQVITSGQTWWESLQDRRSLRTSPGEYFAALSAKRRFD
                     YWVSRSKWHAQWRTWSLGAVFLLVFLAEVVSGLEPAVDRAALVKSEVWAGQVWRLLTA
                     ALMHGSFMHLAMNGFAWISLGVLLERVVRPSLLFPLFLLSALGGNVASLIFLPLQPSL
                     GASGGIMG"
     gene            961..1908
                     /locus_tag="VFV26_08175"
     CDS             961..1908
                     /locus_tag="VFV26_08175"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX4846180.1"
                     /translation="MRIPILFNPASGTSPKDPDALLRPLPRDLRDRVEPIPFGPPWDF
                     EPAIAQALAAEGPLLVWGGDGTIHHAAKALIDRGCPVPLGAIPGGSGNGLVRGLRTPL
                     EPAGALRRLLEGRELRMDLPRLDGEPFMNICGTGFEAAVAHRFDAMAGRGFSTYAQAC
                     LQLWRTWQNADLAWDAESVPMPPPASRSGRLRAAFQGPQPSLPASAWSLCFANLPTYG
                     SGLWIAPGADPTDGCLQWATLARPSWLDLLTKMPALFRETGSTSLRQEGRLRRATLRL
                     PRPLPWHLDGEPVAGRDRAELTVEQRAFRMQVTGACPWQ"
     gene            complement(1970..2704)
                     /locus_tag="VFV26_08180"
     CDS             complement(1970..2704)
                     /locus_tag="VFV26_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846181.1"
                     /translation="MAAGTARADGIAPATRDRTNRRPGMMASDISQGRPALARPALAP
                     RVAGVAIYPGTRTVVPPAWNRCTILPTPLYWRQRDLMAEIQCISREGFIPVTPIGAAV
                     EEISDYAIHPAGWRAYGVTVPAGGTAQFEVKHGKLGWFRLMLVDKWGRPGPGMLQAAI
                     AHQPVMVTYRNPGKEATAVYIIVDDPAWWSDAQNPYTFVVRRDWDPAAVDLSEVKLVA
                     GLWGASPSVSAEFRGPSLTGPAVYPR"
     gene            2943..4310
                     /gene="murC"
                     /locus_tag="VFV26_08185"
     CDS             2943..4310
                     /gene="murC"
                     /locus_tag="VFV26_08185"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX4846182.1"
                     /translation="MFGKIQHIHFVGIGGIGMSGIAEVLANLGYQVSGSDLKESAVTA
                     RLRSLGITVHLGHEGKAIEGAQVVVISSAVKGDNPEVVAAHAAKIPVIPRGEMLAELM
                     RMKYGIAMAGSHGKTTTTSMVAQVLSQSGIDPTIVIGGKLGTIGSNAKLGKGPFLVAE
                     ADESDGSFLMLNPTLATITNIDREHLDHYKDLEEIQDAFVAFANKVPFYGSVFLCMDD
                     ANAAAVRPRLKRQVRTYGTHPQVDIRAREIRQEGFRTHFKVNAYGEDLGAFSMGVPGH
                     HMVLNALAAIGIALELDVEREVIRASLASFTGADRRFHLKGEKGGVLVVDDYGHHPTE
                     IAATLAAARAGFPERRIVAAFQPHRYSRTKALLDEFGTAFFEADSVVVTDIYAAGEQP
                     IQGVDSAAVVEALRSHGQKDVHQAGRVEDLPQILKSLTRSGDLLITFGAGTITQAGPA
                     FLDLD"
     gene            4313..>6714
                     /locus_tag="VFV26_08190"
     CDS             4313..>6714
                     /locus_tag="VFV26_08190"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HEX4846183.1"
                     /translation="MAPIRRLLPALVSAAPLLAGLPPGLLPASDHRPEVPQPDLGTRY
                     TSHPALMAYVRALAAAAPDRVKLLTLNVTEEGHEQPFLVISSPANLKRLDELRALNRK
                     LADPRVCSEDEARRIAETNPAFVWLGYSVHGSEASGTEAGLAVAYHYAAARSPEALKQ
                     LERVVLLLDLSQNPDGRARHLQALAEAATPFSTSDPADAQHAGRWPGGRFNHRLFDLN
                     RDWAWQTQGETRAKTAAFLGWSPQVMADHHEMWPEASYYFPPTMQPIHEALPEAFSGR
                     WQAAFGKGVARAFDARGWAYFSRDVFDLFYPGYGDTWPTFQGAVGMTFEVAGQGGPAY
                     KRLDGEILTLESRIQRHVAASLATVATAAAERQALLWDFQRARRERVALGDRAGAFLL
                     AEGEDPGRARALVDLLGRNGIEVLRTSAPLTAGGLEPIGLAKAPGLPPGSYLVPLDQP
                     RGALAQALLEGEARMGPKPTFDVTAWSLPLAFHVPSWRAKTRPKVATGPLAPIADMTL
                     PEAAWGYLVPGGREGADRTLAALLQEGFKATALAEAATFKGQRLEPGTLVLPRRTNPD
                     SLRGRLQALAQAHGHPVLPVDTAQMDAGPDLGSNRALVLRTPRLAVLMDRPANPMAFG
                     ALAHTLIETGLPFVQLRADRLGATSLARFTHLLVVDDSAQGKAWQQVLGEGGAAKLKA
                     WVQEGGTLLAFQGGAAYASRAGLTPTGYHLLARAAEEARLKEKDPKREAPKADPADLV
                     RPWDQRETRALEESIPGAFLKAQVDGSHPLAWGLHAEAGAPLLATSDPVLELSQGGEN
                     PIR"
BASE COUNT         1079 a         2535 c         2206 g          894 t
ORIGIN      
        1 cccatgatgc ctccggaagc gccaaggctc ggctgaagcg gcaggaagat cagactggcg
       61 acatttccac cgagggccga aagcaggaac agcgggaaaa gcagcgaggg acgtacaacc
      121 ctttccagca ggacacccag ggaaatccag gcaaatccgt tcatggccag atgcatgaag
      181 gaaccatgca tcagcgcggc ggtcagaaga cgccagacct gtcctgccca tacctcgctc
      241 ttgacgagcg cagcccgatc gacggcgggc tcgagcccac tcaccacttc cgcgaggaac
      301 accagcagga acacggcgcc gagggaccag gtgcgccatt gagcgtgcca cttcgagcgg
      361 gacacccaat agtcgaacct ccgctttgcg gaaagcgctg cgaagtactc gcccggcgat
      421 gtcctcaggc tgcggcggtc ctggagcgac tcccaccagg tttgaccgga ggtgatgacc
      481 tggatggaaa agtaaccgat gttcaacccg gcgagagtgc ccgcgaggat gagcgggccc
      541 agcagccagg cgatccagcc ctgctgctgg atgtcccggg agagcgaatc gtccaggtga
      601 tgagccatgg ctcgttgaac ttcaggaaga tccacgacat ccaccacacg gtcttcacct
      661 ggcatctcga ccaggctgat gccagggccg gatggcttct caccacccag gtcctgcgag
      721 acgccgagca cgatgccggc gagggtcatg ggctccactt ggccgtcatg ccaaacgccc
      781 atccggccgt ccttcagccg ggccggggga tagagattcg gatcctgcca cggggcacgg
      841 aaggtggtca tatcaaggcg ccaggaatgg agtggggtct gcgaatgcac attcctacca
      901 tgattccggc ccaacgcagc ctcggcagtt cgggagggct gaacccgcta ttctcgaccc
      961 atgagaatcc ccatcctctt caaccccgcc tcgggcacct cgcccaagga tccggacgcg
     1021 ctgctgcgcc ccctgcccag ggacctgcgg gaccgggtgg aacccatccc cttcggcccg
     1081 ccctgggact tcgagcccgc catcgcccag gcgctggcgg cggagggccc gctgctggtg
     1141 tggggcggcg acggcaccat ccaccatgcg gccaaggccc tcatcgaccg gggctgcccg
     1201 gtgcccctgg gcgcgatccc cggcggcagc ggcaacggcc tggtgcgggg cctccgcacg
     1261 cccctggaac ccgcgggcgc gctgcgccgc ctgctggaag gccgggagct gcgcatggac
     1321 ctgccgcggc tggacggcga gcccttcatg aacatctgcg gcacgggctt cgaggccgcc
     1381 gtggcccatc gcttcgacgc catggcgggc cgcgggttca gcacctacgc ccaggcctgc
     1441 ctgcagcttt ggcggacctg gcagaacgcg gacctggcct gggatgcgga atccgtcccc
     1501 atgcccccgc ccgccagccg gagcggaagg ctgcgggcgg cgttccaggg cccgcaaccc
     1561 agcctcccgg cctccgcctg gagcctctgc ttcgccaacc tgcccaccta cggcagcggc
     1621 ctgtggatcg cccccggcgc cgatcccacg gacggctgcc tccagtgggc caccctggcg
     1681 cggccctcct ggctggatct gctgacgaag atgcccgcgc tcttccgcga aaccggatcc
     1741 acctccctgc gccaggaagg ccgcctgcgc cgtgccaccc tgcgcctgcc ccgccccctg
     1801 ccctggcacc tggacggcga acccgtggcc ggacgggacc gcgccgagct caccgtcgag
     1861 cagcgggcct tccgcatgca ggtgacgggg gcgtgcccct ggcaataggc gcagccatgc
     1921 gcagaaacgg ccccgaacgg ggccgtttct gcgcatggga actgcccacc taacgaggat
     1981 agacggccgg ccccgtcagg ctgggccccc ggaactcggc gctcacactg gggctggcgc
     2041 cccagaggcc ggccaccagc ttcacctcgc tgagatccac cgcggcggga tcccagtcgc
     2101 ggcgcaccac gaaggtgtag ggattctggg catcggacca ccaggccgga tcgtccacga
     2161 tgatgtagac ggcggtggcc tccttgcccg gattccggta ggtcaccatc acgggctgat
     2221 gggcgatggc agcctggagc atgcccgggc cgggccgccc ccacttgtcc accagcatca
     2281 gacggaacca gccgagcttg ccgtgcttga cttcgaactg ggccgtgcct ccggccggaa
     2341 cggtcacgcc gtaggcgcgc cagccggcgg ggtggatggc atagtcgctg atctcctcca
     2401 cggcggcgcc gatgggcgtc accgggatga aaccctcccg cgagatgcac tggatctcgg
     2461 ccatgagatc ccgctgccgc cagtagagcg gagtaggcag gatcgtgcag cggttccagg
     2521 cgggcggaac caccgtgcgg gtgccggggt agatggccac cccggccacg cgcggcgcca
     2581 gggccggacg ggccagggcc gggcggccct ggctgatatc agaggccatc atccccgggc
     2641 ggcggttcgt ccggtcccgg gtggcgggag cgatgccatc ggcccgggcg gtcccggcgg
     2701 ccatccgtcc ctcggcgggg cgatcgggct gtggcgatac gcgacggtcc atcctcacct
     2761 gtggcggagc gccacagagg gccgaagcca cggccagggc ggaaaaacct gcaatgacgc
     2821 gaagcagtgg agccaggaac ctcatgacgc accccctttg gtcccagtga taccccatca
     2881 tcatgccaaa accacgccag cgctggggta ttctggcgat cttcaaacat gggagttccc
     2941 aggtgttcgg caagatccag cacatccatt tcgtgggcat cggcggcatc ggcatgtcgg
     3001 gcatcgccga ggtgctcgcc aacctgggct accaggtatc cggctctgac ctcaaggaaa
     3061 gcgccgtgac cgcgcgcctg cggagcctgg gcatcaccgt gcacctgggc cacgagggca
     3121 aggccatcga gggggcccag gtggtggtca tctcgtcggc cgtgaagggc gacaaccccg
     3181 aggtcgtggc ggcccacgcc gccaaaatcc ccgtgatccc ccggggcgag atgctcgcgg
     3241 agctcatgcg catgaagtac ggcatcgcca tggccggctc ccacggcaag accaccacca
     3301 ccagcatggt ggcccaggtg ctcagccaga gcggcatcga ccccaccatc gtcatcggcg
     3361 gcaagctcgg caccatcggc agcaacgcca agctgggcaa ggggcccttc ctggtggccg
     3421 aggccgacga gagcgacggc agcttcctca tgctgaaccc caccctggcc accatcacca
     3481 acatcgaccg ggaacacctg gaccactaca aggacctgga ggagatccag gacgccttcg
     3541 tggccttcgc caacaaggtg cctttctacg ggtcggtgtt cctctgcatg gacgatgcga
     3601 acgccgccgc cgtgcgcccg cgcctcaagc gccaggtgcg cacctacggc acccatcccc
     3661 aggtggacat ccgggcccgg gagatccgcc aggagggctt ccgcacccac ttcaaggtga
     3721 acgcctacgg agaggatctg ggcgccttca gcatgggcgt gcccggccac cacatggtgc
     3781 tgaacgccct ggccgccatc ggcatcgccc tggaactgga cgttgagcgc gaggtcatcc
     3841 gcgccagcct cgccagcttc accggcgccg accgccgctt ccacctcaag ggcgagaagg
     3901 gcggcgtgct ggtggtggac gactacggcc accatcccac ggagatcgcc gccaccctgg
     3961 ccgcggcccg ggcgggcttc ccggagcggc gcatcgtggc ggccttccag ccccaccgct
     4021 acagccgcac caaggccctg ctggatgagt tcggcacggc cttcttcgag gcggattccg
     4081 tggtcgtcac cgacatctac gccgcgggcg agcagcccat ccagggcgtg gacagcgccg
     4141 ccgtggtgga agccctgcgc tcccacggac agaaggatgt gcaccaggcg ggccgcgtgg
     4201 aggacctgcc ccagattctc aagagcctca cccgcagcgg ggacctgctg atcaccttcg
     4261 gcgcgggcac catcacccag gccggcccgg ccttcctgga cctggactga ccgtggcccc
     4321 catccggcgc ctcctccctg ccctggtttc cgccgcgccg ctgctggcgg gactccctcc
     4381 gggactgctg cccgcttcgg accaccgccc ggaggtgccc cagccggatc tcggcacccg
     4441 ctacacatcc caccccgccc tcatggccta tgtccgcgcc ctggccgccg ccgcgccgga
     4501 ccgggtgaag ctcctcaccc tgaacgtcac ggaagaaggc cacgagcagc ccttcctggt
     4561 gatcagttcg cccgccaacc tgaagcgcct ggacgagctc cgggccctca accgcaagct
     4621 cgccgacccc cgggtctgca gcgaggatga agcccgccgc atcgcggaga cgaaccccgc
     4681 cttcgtgtgg ctgggctact cggtccacgg atccgaggcc tccggcaccg aggccggcct
     4741 cgccgtggcc taccactacg ccgccgcccg cagcccggag gcgctgaagc agcttgagcg
     4801 ggtcgtgctc ctcctggacc tttcgcagaa cccggacgga cgggcccgcc acctgcaggc
     4861 cttggcggaa gccgcgaccc ccttcagcac cagtgatccc gcggacgccc agcatgcggg
     4921 ccgctggccc ggaggccgct tcaaccaccg gctcttcgac ctgaaccgcg actgggcctg
     4981 gcagacccag ggcgagaccc gcgccaagac cgcggccttc ctgggctgga gcccgcaggt
     5041 gatggcggac caccacgaga tgtggcccga ggcctcctac tatttcccgc ccaccatgca
     5101 gcccatccac gaggcgctgc cggaggcctt ctcgggccgc tggcaggcgg ccttcggcaa
     5161 gggcgtggcc cgggccttcg acgcccgggg ctgggcctac ttcagccgcg atgtcttcga
     5221 cctcttctac ccgggctacg gcgacacctg gcccaccttc cagggcgccg tgggcatgac
     5281 cttcgaggtg gcgggccagg gcggaccggc ctacaagcgc ctggatggcg agatcctcac
     5341 cctggaaagc cgcatccagc gccacgtggc cgccagcctc gccaccgtgg ccaccgccgc
     5401 cgcggaacgc caggccctgc tctgggactt ccagcgggcc cgccgggagc gcgtggccct
     5461 gggcgaccgg gccggggcct tcctcctcgc cgagggggag gatccgggcc gcgcgcgcgc
     5521 cctggtggac ctgctggggc gcaacggcat cgaagtgctg cgcacctccg cccccctcac
     5581 ggccggggga ctcgaaccca tcggcctggc caaggcgccc ggcctgcccc cgggcagcta
     5641 cctcgtgccc ctggaccagc cccggggggc cctggcccag gccctgctcg aaggcgaagc
     5701 ccgcatgggc ccgaagccca ccttcgatgt cacggcctgg agcctccccc tggccttcca
     5761 tgtgccctcc tggagagcga agacccgccc gaaggtggcc accggccccc tggcgcccat
     5821 cgcggacatg acactccccg aggccgcctg gggctacctg gtgcccggcg ggcgcgaggg
     5881 cgccgaccgc accctggcgg ccctgctcca ggagggcttc aaggccaccg ccctggccga
     5941 agccgccacc ttcaagggcc agcggctgga acccggcacc ctcgtcctgc cccgccgcac
     6001 caacccggat tccctcaggg gcaggctcca ggccctcgcc caggcccatg gccacccggt
     6061 gctgcccgtg gacacggccc agatggacgc cgggcccgac ctggggtcca accgcgctct
     6121 cgtcctccgc acgccgcgcc tcgccgtgct catggaccgc cccgccaacc ccatggcctt
     6181 cggcgccctg gcccacaccc tcatcgagac ggggctgccc ttcgtgcagc tcagggccga
     6241 tcggctcggc gccacctccc tggcgcgctt cacgcacctc ctcgtggtgg acgacagcgc
     6301 ccagggcaag gcctggcagc aggtcctcgg cgaaggcggc gccgccaagc tgaaagcctg
     6361 ggtgcaggag ggcggcaccc tgctggcctt ccagggcggc gcggcctacg cctccagggc
     6421 ggggctgacg cccacgggct accacctgct ggccagggcc gccgaggagg cccggctcaa
     6481 ggagaaggat cccaagcgcg aggcccccaa ggccgacccc gccgacctgg tccgcccctg
     6541 ggaccagcgc gaaacgcggg ccctggagga aagcatcccc ggagccttcc tgaaggcgca
     6601 ggtggacggc agccatcccc tggcctgggg cctccatgcc gaagccggcg cccccctgct
     6661 ggccaccagc gatcccgtcc tggagctgag ccagggcggg gagaacccca tccg
//
LOCUS       DASUDT010000400         2811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_173435, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000400 DASUDT010000000
VERSION     DASUDT010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173435"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VFV26_08195"
     CDS             complement(<1..555)
                     /locus_tag="VFV26_08195"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX4846184.1"
                     /translation="MQRLVQGIHHFQTQIFSSHKELFERLDKDQTPETLFITCSDSRI
                     SPNLITQTQPGELFILRNVGNLVPPYEHMGGMTAGIEFAVANLKVKDIIVCGHSNCGA
                     MRALLEPEQLGELPATKAWLTHARKTEQIMWESYGHLHGHDLLHATVEENVLVQLENL
                     RSHPAVAKAMANGMLHLHAWVYKIE"
     gene            complement(601..1332)
                     /locus_tag="VFV26_08200"
     CDS             complement(601..1332)
                     /locus_tag="VFV26_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4846185.1"
                     /translation="MTDAPLIRLTDITKVYQMGDMEVRALDGVSMEIRRGEYVAIMGP
                     SGSGKSTMMNVIGCLDTPTSGTYELNGKLASAMTDDDLAQIRNEEIGFVFQTFNLLAR
                     TTSLQNVELPLIYAGKTPVERHQMALKALENVGLGTRSDHMPNQLSGGQRQRVAIARA
                     LVNDPSILLADEPTGALDSKTSIEIMALFEDLYQKGNTIILVTHEEDIARHAHRIVKL
                     RDGKVIHDEPNTPITSEEHLAHLSL"
     gene            1502..>2811
                     /locus_tag="VFV26_08205"
     CDS             1502..>2811
                     /locus_tag="VFV26_08205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846186.1"
                     /translation="MRLRYRILLEGLVASSAPGRPGILFLASHPTLVDPFLLSVELHG
                     RFAPILVAGRDHAASAPLRWLARLLGSRPLPDPADHGDGARQALDGELAALASQLSSG
                     RNLLLFPGARLARQKTEDLSDNSLVESILRQAPGTRVVVVRLRGLWGSRFSAASGHRP
                     AIGTELLKGAGYLLANGLFFMPRRDVQVGFEEVQDLPLAGGREAVNRTLEGRLNADAA
                     PRTFVPYLFWKGHAPRALPEPPRPRVEGNPRNVPPQVRDAVRRHLQAVTGRAEIQDSQ
                     HLITDLGLDALGHRELELWLQRAFGYPCSDPASLQTVADLMLAATGAAVSLRQGELKA
                     VPHAWFHSPTDLPIEMPEGSTIPEVFLKQARRDPGRVVLADQLGGVKTYRDVLTAILV
                     LKPIFEGLEGTHVGLMLPASGGASILYLALLFAGKTPVLVNWTAG"
BASE COUNT          386 a          916 c          984 g          525 t
ORIGIN      
        1 ctcgatcttg tagacccagg cgtgcagatg cagcatgccg ttggccatgg ccttggccac
       61 ggcgggatgg ctgcggaggt tctccagctg gacgaggacg ttctcctcga cggtggcgtg
      121 cagcaggtcg tggccatgga ggtggccgta gctctcccac atgatctgct cggtcttgcg
      181 ggcgtgggtc agccaggcct tggtggcggg cagctccccg agctgctcgg gttccaggag
      241 cgcccgcatg gcaccgcagt tggagtggcc gcagacgatg atgtccttca ccttgaggtt
      301 cgccacggca aactcgatgc cggcggtcat gccccccatg tgctcgtagg gcggcaccag
      361 gttgcccacg ttccgcagga tgaacagctc gcctggctgg gtctgggtga tcaggttcgg
      421 gctgatgcgc gaatcggagc aggtgatgaa gagggtttcg ggggtctggt ccttgtccag
      481 ccgctcgaag agctccttgt gggagctgaa gatctgcgtc tggaagtggt ggatgccctg
      541 gacgagtctc tgcatccctc aagtctaccg gaggtcaggg tccaggtcag gccccggaga
      601 tcagaggctg aggtgggcca ggtgctcctc ggaggtgatg ggggtgttcg gctcgtcgtg
      661 gatgaccttg ccatcacgca gtttcacgat gcggtgggca tggcgggcga tgtcctcctc
      721 gtgggtgacg aggatgatgg tgttgccctt ctggtacaga tcttcgaaga gggccatgat
      781 ctcgatgctg gttttggaat ccagggcacc agtgggctcg tccgccagca ggatggaggg
      841 gtcgttcacc agggcccggg cgatggccac gcgctgccgc tggccacccg agagctggtt
      901 gggcatgtgg tcgctgcggg tgcccaggcc gacgttttcc agggccttca gcgccatctg
      961 gtgccgttcg acgggcgtct tgcccgcata gatcaggggc agttccacgt tctgcaggga
     1021 ggtggtgcgg gccagcaggt tgaaggtctg gaagacgaag ccgatctcct cgttgcggat
     1081 ctgggccagg tcgtcgtcgg tcatggccga ggccagcttg ccgttcagct cgtaggtgcc
     1141 gctggtgggc gtgtcgaggc acccgatgac attcatcatg gtggacttgc cggaaccgga
     1201 agggcccatg atggccacgt actcgccccg ccggatctcc atggacacgc cgtccagggc
     1261 ccgcacttcc atgtcgccca tctggtagac cttggtgatg tcggtgagcc ggatcagggg
     1321 agcgtcggtc atggagccct cgaagggcct gccgcggccc tgctccatct tcgcagatgt
     1381 cctgctccag gtttagggcc cggcctggat tcccgctaca atccgggact tgtccgcatt
     1441 tcgatggtag gtcctgccca cgatgatccc ctctctgatc cgagccctgg gtcggccgct
     1501 gttgcggctg cgctatcgca tcctcctgga ggggctggtc gcatcgtctg cgccgggccg
     1561 gcctggcatc ctcttcctgg cctcccatcc caccctggtg gaccccttcc tgctgtccgt
     1621 ggaactgcac gggcgcttcg cccccatcct ggtggcgggc cgggaccacg cggcctcggc
     1681 tcccctgcgc tggctggccc ggctgctggg gtcgagaccc ctgccggatc cagccgacca
     1741 cggtgatggt gcgcgccagg ccctggacgg ggagctggcc gccctggcct cccagctctc
     1801 atccggccgc aacctgctgc tgttcccggg ggcccgcctg gcccggcaga agaccgagga
     1861 cctgtccgac aacagcctgg tggaatcgat tctccgtcag gcccctggaa cccgggtggt
     1921 ggtggtccgc ctgcgggggc tctggggcag ccgtttcagc gcggcctccg ggcaccgccc
     1981 cgccattggc accgagctgc tgaagggcgc gggctacctc ctggccaacg ggctcttctt
     2041 catgccccgg cgggacgtcc aggtgggctt tgaagaggtc caggacctgc cgcttgccgg
     2101 gggccgtgag gccgtcaacc gcaccctgga aggtcgcctg aatgcggacg ccgcgccccg
     2161 gacctttgtg ccctacctgt tctggaaggg ccatgccccc agggcattgc ccgaaccgcc
     2221 gcggccccgg gtggagggca acccccgcaa cgtgccgccc caggtccgcg atgcggtgcg
     2281 gcggcacctg caggcagtga cgggtcgggc cgagatccag gacagtcagc acctgatcac
     2341 ggacctgggt ctggatgccc tggggcaccg cgagctggag ctctggctcc agcgggcctt
     2401 cggctacccc tgcagcgatc cggcctcgct ccagaccgtg gctgatctga tgctggcggc
     2461 cacgggagcc gccgtgtccc tgcggcaggg ggagctgaag gccgtgcccc atgcctggtt
     2521 ccactcgcct acggacctgc ccatcgagat gcccgaaggc agcaccattc cggaggtctt
     2581 cctcaagcag gcccgccggg atccgggccg cgtggtgctg gcggaccagc tcggcggcgt
     2641 gaagacctac cgggatgtgc tcacggccat cctcgtgctg aagcccatct tcgaagggct
     2701 ggagggcacc cacgtgggcc tcatgctccc ggcttccgga ggggccagca tcctctacct
     2761 ggcgctgctc ttcgcgggca agacaccggt gctggtgaac tggaccgccg g
//
LOCUS       DASUDT010000401         2827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_40895, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000401 DASUDT010000000
VERSION     DASUDT010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40895"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..1137
                     /locus_tag="VFV26_08210"
     CDS             262..1137
                     /locus_tag="VFV26_08210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846187.1"
                     /translation="MRTLALLPALLVPAALVAQAPVASLGDQVKAERLAVDKLMADLM
                     YTEALKRAEALLPTVKPAFDKTNNQTLVQSCAVYMDLGQAYRMAVETADAAGAWEKAL
                     EYARTAKALSLESYEGIREPFTQTVKYYGEAGSRAQQVLDENDARIKELKGKSALDPG
                     ERQELDLALGVEKEVVDDAKWVKFFQTYLDVTKRESEAFDPLIKVMEDKLKGEADQVA
                     DYKAGKGDKLKWVEAVVSSPAYLEAQGDKAGKARFLYRLAALDPASKKVQQQLDVLFG
                     RAAAPAKGKAKPKKG"
     gene            1168..>2827
                     /locus_tag="VFV26_08215"
     CDS             1168..>2827
                     /locus_tag="VFV26_08215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEX4846188.1"
                     /translation="MPRRAAPRIPVRPPARTPDRRNASRAPRPQAPGLRPYESFEATF
                     LGHPEGAGGFLRLAGARKGPGADLLVDWQDAHGAIHGDRVVAEVNGEGWDGRLKARVL
                     EVKGRGDIPLPGTLQKQPWGWRVVPLEPRLPQIISVPPTELAEDGELVSVKLDPDPGA
                     KQLRGTVVARLGKKTDLKIENKLTAALFNLRTAFPDAVMRELAPFPTAIPPEWLSGRE
                     DLRETLTCTVDPPTAKDFDDAISLEVLPRSEGGGWLLGVHIADVSHYVAEGGPLEEEA
                     RLRGTSVYFPDEAIPMIPDRLSGDLCSLREGVDRLTMTAWITLSPSLDVVETRLSESV
                     IRSAKRLTYDEVKEACIDLSTRKRAELGEALCALLDESLVLSRRLTEIRLGRGAMNLD
                     TEEAEFLFDAEGRPVDARRYPRHDAHRMIEEFMLLANETVASFFTRKKIPAIYRIHDE
                     PDPLKLEIFAEVARTFGLLKPREVPTPEHLNAMLDKVRGGPLEAMINTLLLRSLKRAE
                     YSVENIGHSGLALQDYLHFTSPIRRYPDLIVHRYLRKVLRGERLP"
BASE COUNT          525 a          988 c          899 g          415 t
ORIGIN      
        1 cacctgatgg tgcgcgtcca tcagggcatc gcccacactg agcgaatcat tccaaaccac
       61 gagatccaca acgacctccc actcatcaga tcgactggcg gcgccgaaaa gtccactttc
      121 agcacccgga tccggggcga aacaaagccc tggaagaatt gcgatcaatc cacagtcctg
      181 gggctagcca cggcccgcca atccaggaac aatagatctt tccccctggg gtagcccccc
      241 tccatctttg ggtcaaacct gatgcgcaca ctcgcccttc ttccagctct tcttgttccc
      301 gcggccctcg tcgcccaggc ccctgtagcg tcactgggcg accaagtgaa agccgaacgc
      361 ctggccgtgg acaagctgat ggcggatctc atgtacacgg aggccctgaa gcgggccgaa
      421 gccctgcttc ccaccgtgaa gcccgccttc gacaagacca acaaccagac cctggtccag
      481 agttgcgcgg tctacatgga cctgggccag gcctatcgca tggcggtgga aaccgccgat
      541 gccgcagggg cctgggagaa ggccctggaa tatgcccgga ccgccaaggc cctgagcctc
      601 gaaagctatg aggggatcag ggaacctttc acccagacgg tgaagtacta cggggaagcc
      661 gggagccggg cccagcaggt gcttgatgaa aatgacgccc gcatcaagga actaaagggc
      721 aagagcgccc tggaccccgg cgagcggcag gagctggatc tggccctcgg cgtggaaaag
      781 gaagtggtgg acgacgccaa gtgggtgaag ttcttccaga cttaccttga tgtcaccaag
      841 cgcgaatccg aagccttcga cccgctcatc aaggtcatgg aggacaagct caagggcgag
      901 gccgaccagg tggccgacta caaggctggc aagggcgaca agctcaagtg ggtggaagcc
      961 gtggtgtcca gccccgccta ccttgaggcg cagggggaca aggcgggcaa ggctcgtttc
     1021 ctctaccgtc tcgcggccct ggatcccgcg agcaagaagg tccagcagca gctggacgtc
     1081 ctcttcggcc gggccgccgc ccctgccaag ggcaaggcca agcccaagaa gggctaacct
     1141 cctcgcggaa ggctgtaccc tgagggcatg ccccgccgcg ccgctccccg cattcccgtc
     1201 cgtcccccgg cccgcacgcc cgaccggcgg aacgcttccc gagccccgag gccccaggcc
     1261 ccggggcttc gtccgtacga aagcttcgag gccaccttcc tgggccaccc tgagggtgca
     1321 ggcggcttcc tgaggctggc cggcgcccgc aaggggcccg gcgcggacct gctggtggac
     1381 tggcaggatg cccatggggc catccacgga gaccgcgtgg tggccgaggt gaatggcgag
     1441 ggctgggatg gccgcctcaa ggcccgggtg ctggaggtca agggccgggg cgacatcccc
     1501 ctgcccggca ccctgcagaa gcagccctgg ggctggcgcg tggtgcccct ggagccccgc
     1561 ctgccccaga tcatctccgt cccccccacg gaactcgccg aagacggcga gctggtcagc
     1621 gtgaagctgg acccggaccc cggggcgaag cagctgcgcg gcaccgtggt ggcgcggctc
     1681 gggaagaaga ccgacctgaa gatcgagaac aagctcacgg cggccctctt caacctgcgc
     1741 acggccttcc cggacgccgt catgcgggag ctggccccct tccccacggc cattccaccc
     1801 gagtggctgt cgggaaggga ggatctgcgg gagaccctga cctgcaccgt ggatcccccc
     1861 acggccaagg actttgacga cgccatcagc ctcgaagtgc tgcccaggtc tgaaggcggt
     1921 ggatggctgc tgggcgtcca catcgcggac gtgagccact acgtggccga gggaggcccc
     1981 ctggaggagg aggcacgcct gcggggcacc tccgtctact tcccggacga ggccatcccc
     2041 atgattccgg accgcctcag cggggatctg tgcagcctcc gggaaggcgt ggaccggctc
     2101 accatgacgg cctggatcac cctttcgcct tcgctcgatg tcgtggagac acggctttcc
     2161 gaaagcgtca tccgcagcgc caagcgcctc acctacgacg aggtgaagga ggcctgcatc
     2221 gacctgtcga cgcgcaagcg cgccgaattg ggcgaggccc tctgtgccct gctggacgag
     2281 tcgctggtgc tgtcgcgccg cctcacggag atccgcctgg gccgtggcgc catgaacctg
     2341 gatacggagg aggccgagtt cctcttcgat gcggagggcc gccccgtgga tgcccggcgc
     2401 tacccgcgcc atgacgccca ccgcatgatc gaggagttca tgctgctggc gaacgaaacc
     2461 gtggcgagct tcttcacccg caagaagatc cccgccatct accgcatcca tgacgagccc
     2521 gatcccctga agctggagat cttcgcggag gtggcccgca ccttcgggct gctcaagccc
     2581 cgggaggtgc ccacccccga gcacctcaac gccatgctgg acaaggtccg cggcggcccc
     2641 ctggaagcca tgatcaacac cctgctgctg cgcagcctga agcgggccga gtacagcgtc
     2701 gagaacatcg ggcactccgg cctggcgctc caggactacc tgcacttcac cagccccatc
     2761 cgccgctatc cggatctcat cgtccaccgc tacctgcgga aggtgctccg cggcgagcgc
     2821 ctgcccg
//
LOCUS       DASUDT010000402         3880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1896050, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000402 DASUDT010000000
VERSION     DASUDT010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3880
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896050"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VFV26_08220"
     CDS             <1..231
                     /locus_tag="VFV26_08220"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HEX4846189.1"
                     /translation="KGFQLAFPVLAVLFLMDLVLGFSGKFMPQLQLLQLSFPLKIAVG
                     MVVLGLLLRDLGPWLAPLLEKAPRLALKLLGG"
     gene            233..1288
                     /gene="flhB"
                     /locus_tag="VFV26_08225"
     CDS             233..1288
                     /gene="flhB"
                     /locus_tag="VFV26_08225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HEX4846190.1"
                     /translation="MANDPGRTEKATYRRRQKAREEGSVPRSQDFDGAILLWGNFFLF
                     TGLGGATLALMAQQVAHFLNRAQPGALEEAGRITLLSDVLMILGRLLLPFLAVNLLLA
                     LVTGFAQRGFSLSTKAIQPKFERLNPAQGFQRMFSIKAVVDLIKSLAKFAILAWVAYA
                     VLVPRIPLLLGTLKLPLGESMDIFQAAVFALYRNVMLAMLLLAAADFSWQRFSWEKSI
                     RMTKQEVKDEVKDAEGSAEVKQKQKTIMQSRARKRMLAEVSKATVVVTNPTHVAIALR
                     YDEKTSAPVCVAKGLDHLALKIRERAREAGVPTLERPELARALYRSVEVDRPIPKDLY
                     QAVAQVLAFVYRLRGAA"
     gene            1554..2207
                     /locus_tag="VFV26_08230"
     CDS             1554..2207
                     /locus_tag="VFV26_08230"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4846191.1"
                     /translation="MSPRPIVPPHLPPPSLLLVDDDPVPRETLSTLLMGEGFHVVSAA
                     TGEEAERLLRAASPPFDLVITDLVMPGKSGMDVLRCALNTNPSCTVLLLTGFGSVREA
                     TEAMELGAFDFVTKPMQIDQFRNTLRRLMERRALAHERDELREKVKALTERAERLETT
                     LGRMEILANQIAPIGGSQEKSDPLADLERLGALKAKGMLTDEEFEQGKKNLLARWLA"
     gene            2204..>3880
                     /locus_tag="VFV26_08235"
     CDS             2204..>3880
                     /locus_tag="VFV26_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846192.1"
                     /translation="MKRPAGLALLLVSAALQGQHPATKPSAAQAENKSRRLTDAEAAE
                     LAKAALGAGDPAAMRVALARLKGHAFKSSKAPERELALYAQGMLEARLGNLSAAAVPL
                     KKLEKQWPKSPFNGEVQTILAEEAAGQRRFKDAESRLHRALASDIPSERKRKAQELLL
                     WTLVEQGRAQEGVAIVESLRPLEGNEKPSEQGLAAIVEILGAAGDRQQLEGSRNAFVN
                     LYPASVLMARVDLAYGQVLGRTGDAAGSAQILRKLIQDHPASTQADDARLALASLLTD
                     GSLTDTKDMPSAESLLAEVRRNGKALPMGQAQLVELRVLVGKSLWEDALNLADRMGTE
                     GRRAMPEAGRLWGVAWNAWVGERLEKGFPGELLARLKPGAFGALEAKFRLGVAKLLAS
                     RGLLDVLPALFAEAPAAERGGLRKAALAEVQPEAQPQAVLKLLPAKGGTPDEALLRAR
                     AEAAQQRWPQLRATLRQARPGPERMQALLRLLQRPLAKAETASQRLKEAEGWLAQASE
                     KGMVREPLAILVADLRIQAGDFRGALALYPVKAASAEQRGWVALMRAQALL"
BASE COUNT          635 a         1296 c         1348 g          601 t
ORIGIN      
        1 aagggtttcc agctggcctt ccccgtgctg gcggtgctgt tcctcatgga cctggtcctt
       61 ggcttctcgg ggaaattcat gcctcagctg cagctgctcc agctgagctt ccccctgaag
      121 atcgccgtgg gcatggtggt cctcggtctg ctgctccggg acctggggcc ctggctggcg
      181 ccgctgctcg aaaaggctcc ccgcctcgcc ttgaagctgc tcgggggctg aggtggccaa
      241 cgatcccggc cgcacggaaa aggccactta ccggcggcgc caaaaggcgc gggaagaggg
      301 ctcggtaccc aggagccagg atttcgacgg cgcgatcctg ctctggggga acttcttcct
      361 gttcacggga ctgggcggcg ccacgctggc cttgatggcc cagcaggtcg cccatttcct
      421 gaaccgggcc cagcccggcg ccctggagga ggcgggccgc atcaccctcc tgtcggacgt
      481 gctcatgatc ctgggccgcc tgctgctgcc tttcctggcc gtgaacctgc tgctggccct
      541 ggtcacgggc ttcgcccagc ggggcttctc cctcagcacg aaggccatcc agcccaagtt
      601 cgaacggctg aatccggccc agggattcca gcgcatgttc tccatcaagg ccgtggtgga
      661 tctcatcaag agcctcgcga agttcgccat cctggcctgg gtggcctatg cggtgctggt
      721 gccgcgcatc cccctgcttc tggggacctt gaagctgccc ctgggcgaat ccatggacat
      781 cttccaggcg gcggtcttcg ccctctaccg gaacgtgatg ctggccatgc tcctgctcgc
      841 cgcggcggat ttctcctggc agcggttctc ctgggagaag agcatccgca tgaccaagca
      901 ggaggtgaag gacgaggtca aggatgcgga gggcagcgcc gaggtcaaac agaagcagaa
      961 aaccatcatg cagtcccggg cccggaagcg catgctggcg gaggtttcca aggccacggt
     1021 ggtggtgacg aaccccaccc acgtggccat cgcgctgagg tatgacgaaa agacttcggc
     1081 gcccgtgtgc gtggccaagg gcctggacca cctggccctc aagatccgcg agcgggcccg
     1141 ggaggcgggc gtgccgaccc tggagcgccc cgagctggcc cgggccctgt accgttccgt
     1201 ggaggtggac cggcccattc cgaaggacct ctaccaggcc gtggcccagg tgctggcctt
     1261 cgtctaccgg ttgcgggggg ccgcctgaac cgcccggcag acctgccggg ccgacggagc
     1321 ccggttgaca tggaggtggt tggggcgggg gtcgtggggg ggtgcccgcg gcaagcgcca
     1381 tggcgagagc cggataggcc aagccatgat cgctgcggac tagatataaa tacctgccgg
     1441 tggtttcggg aacatatcct taatcatgca acccgttccg gttttgcagg cgggctccag
     1501 aagttctgat ccgccaccga aagggtattg ttagaccaca ccaaggatgt ccagtgagcc
     1561 cccgccccat cgtcccgccg caccttccgc cccccagcct gctgctggtg gatgacgatc
     1621 cggtgccccg ggagaccctc tcgacgctgc tcatgggcga agggttccat gtggtgtccg
     1681 ccgccaccgg agaagaggcc gaacgcctcc tgcgggccgc cagccccccc ttcgatctgg
     1741 tgatcacgga cctggtgatg cccgggaaat caggcatgga cgtgctcagg tgcgccctga
     1801 acaccaaccc cagctgcacg gtcctgctgc tcacggggtt cggcagcgtg cgcgaggcca
     1861 cggaggccat ggagctcggc gccttcgatt tcgtgaccaa gcccatgcag atcgaccagt
     1921 tccggaacac cctgcggcgc ctcatggagc ggcgggccct ggcccatgag cgggatgagc
     1981 tgcgggagaa ggtgaaggcc ctcaccgagc gggcggaacg gctggaaacc accctggggc
     2041 gcatggagat cctggccaac cagatcgcgc ccatcggggg atcccaggag aagtccgatc
     2101 ccctggcgga tctggagcgg ctgggcgcgc tcaaggccaa ggggatgctc acggacgagg
     2161 aattcgagca gggcaaaaag aacctcctgg cgcggtggct ggcgtgaaac ggccggctgg
     2221 cctggcgctt ctgctggttt cggccgccct gcagggccaa catccggcca cgaaaccatc
     2281 agccgcgcag gctgagaaca aatcccgccg cctgacggat gccgaagccg ccgaactggc
     2341 caaggcggcc ctgggcgccg gggatcccgc ggccatgcga gtggcgctgg cccggctcaa
     2401 gggccatgcc ttcaaatcca gcaaggcccc cgaacgggaa ctggcgctct atgcccaggg
     2461 catgctggag gcccgcctgg gaaacctcag cgccgccgcc gtacccttga agaaactgga
     2521 aaagcagtgg ccgaagtcgc ccttcaatgg cgaggtccag acgatcctgg cggaggaggc
     2581 cgcaggccag cggcgcttca aggatgcgga aagccgcctt caccgggccc tcgcctcgga
     2641 catcccctcg gagcgcaagc ggaaggccca ggaactgctg ctgtggaccc tggtggaaca
     2701 ggggcgggcc caggaagggg tggccatcgt cgagtcgctc cgcccgctgg aaggcaatga
     2761 gaaacccagc gaacagggcc tggcggccat cgtcgagatt ctgggcgctg ccggtgaccg
     2821 ccagcagctg gaaggcagcc ggaacgcgtt cgtgaacctc taccccgcca gtgtgctcat
     2881 ggcccgggtg gatctggcct acggccaggt cctgggccgc accggggatg cggcgggatc
     2941 cgctcagatt ctgcggaagc tgatccagga tcatcccgcc tcgacgcagg cggatgatgc
     3001 gcgcctggcc ctggccagcc tgctcaccga cggcagcctg acggacacca aggacatgcc
     3061 cagcgccgag tccctgctgg cggaagtccg ccggaacggt aaggctctgc ccatgggtca
     3121 ggcccagctc gtcgagctca gggtgctggt ggggaaatcg ttgtgggagg atgccctcaa
     3181 cctggccgac cgcatgggca ccgaaggccg ccgcgccatg cctgaagccg gcaggctctg
     3241 gggagtggcc tggaatgcct gggtgggcga gcgcctggaa aagggtttcc ccggcgagct
     3301 cctggcgcgg ctcaagcctg gcgccttcgg agccctggag gccaaattcc ggcttggcgt
     3361 ggcgaagctg ctggcctctc ggggcctcct ggatgtcctg cctgcgctgt tcgcagaggc
     3421 tccggccgcc gagcgcggcg gcctccgcaa ggctgccctg gccgaggtgc agcccgaggc
     3481 gcagccgcag gccgtcctga agctgctgcc ggccaaggga ggcacccccg acgaggctct
     3541 gctgagggcc agggcagagg ccgcccagca gcgctggccg cagcttcgtg cgaccctccg
     3601 ccaggcccgc ccggggccgg agcggatgca ggccctgctg cggcttctgc agcgccccct
     3661 ggcgaaagcg gaaaccgcct cccagcggct caaggaagcc gaaggctggc tggcccaggc
     3721 ctctgaaaag gggatggtcc gggagccact ggccatcctg gtggcggatc tccgcatcca
     3781 ggcgggggac ttccggggcg ccttggcctt gtacccggtc aaggcggctt ccgccgagca
     3841 gcggggctgg gtggctctca tgcgggccca ggccctgctc
//
LOCUS       DASUDT010000403         3560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1962299, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000403 DASUDT010000000
VERSION     DASUDT010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962299"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1050
                     /locus_tag="VFV26_08240"
     CDS             142..1050
                     /locus_tag="VFV26_08240"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX4846193.1"
                     /translation="MGTRTAAPAGTCLLAGCGYTGARLARRLMGRWPVLALVRSAASA
                     AALAAEGIRARAVDLDGGGGFAVPPDLASVVYLAPPPGEGDGDPRFQRFLEGLGGVRP
                     QVLVYLSTTGVYGDAQGASVDEATPPAPGDAQGRRRLAAEQAGSAWCAERGIRWVALR
                     VSGIYGPHRLPLDRLRAGEPVLRPEDSGPGNRIQVDDLAAACEAALDRPLSGPVNVTD
                     GDSRSIGAFLELGAHLAGLPPPRRVTLAEARQAISPGMLAFLLASRRVLNRRLTEDLG
                     VSLRYPDPEAGLRASLEEMGISTAAR"
     gene            complement(1031..1555)
                     /locus_tag="VFV26_08245"
     CDS             complement(1031..1555)
                     /locus_tag="VFV26_08245"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002634.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEX4846194.1"
                     /translation="MTLTTPLTAFVRDVPDFPKAGILFRDITPLLSHAEAFAEAVAAM
                     AQPVLTLQPTHVLGLESRGFIFGSALAQKLGVGFVPARKPGKLPMATHKEAYGLEYGT
                     DALEIHRDAFGPGDRVLIVDDVMATGGTAAAAQRLVQKTGAQPVALTVFIELASLPGR
                     EKVEGLPVFSVLRY"
     gene            complement(1558..1830)
                     /locus_tag="VFV26_08250"
     CDS             complement(1558..1830)
                     /locus_tag="VFV26_08250"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX4846195.1"
                     /translation="MTVRFRVHGEVQGVGYRRFAAREAQALDLSGWVRNEADGSVSGE
                     AAGPEAALAAFRASLARGPAFAAVGRLDWSPQDMGSSLPHPFEIRR"
     gene            complement(1835..2584)
                     /gene="surE"
                     /locus_tag="VFV26_08255"
     CDS             complement(1835..2584)
                     /gene="surE"
                     /locus_tag="VFV26_08255"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX4846196.1"
                     /translation="MSERLILLTNDDGLWAPGLAALARAASRFGRVVTVAPDRNRSAI
                     SSALSLHNILRLHEIGPDRHACDGTPVDCVLLGVCEVLGRRPDWVLSGINHGFNLGED
                     VFYSGTVGAAFEGRLQGARAAAFSIHPQGSLEQAEPWIGRFLERWEAMDLPGNRIWNV
                     NFPKGEPKGFRLTSQDSRAYHDLVERRSDPRSTPYFWIGGDAGPTYAKGAGSDAEAVF
                     EGLASVTPLRLDLGCPETLARQADFDSAFNG"
     gene            2640..3227
                     /locus_tag="VFV26_08260"
     CDS             2640..3227
                     /locus_tag="VFV26_08260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4846197.1"
                     /translation="MDSDLPLAPPAALAVAPLDGALPWDRTAVLARLRERIVAFAASR
                     YAGSHAEDLAQEVLVLIHEKYGHLERLEDLVPLAFQILRFKLAAHRRKAARRGEFDAV
                     DVDEFPPPSDAPDPAAVLERKELLARLMGGIARMGERCRELFRLKLQGRTFAEIQGLL
                     GAANLNTVYTWDHRCRKQLLDSLGGGWERSGKGAP"
     gene            3224..>3560
                     /locus_tag="VFV26_08265"
     CDS             3224..>3560
                     /locus_tag="VFV26_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846198.1"
                     /translation="MKRAEAEKLLGGYATGTLTESERRMLCEAALAHQDLFDALADEE
                     ALRELLADPAARAQLLAALAPSSELAPPKVVPFWRRPGVIGAAAGLLVATTAGLVVLR
                     SPEGVPPLAK"
BASE COUNT          461 a         1237 c         1369 g          493 t
ORIGIN      
        1 ggcctgccca tggcggagga acacggaggt ctccgtgcct cctccgtgat ttccgtggct
       61 ctgtggtgaa tctctattca tctggtggcg gcctggcatc acgggtccgg atcccccgtc
      121 ccggcggcgt atgctggagc catgggcaca aggacggcgg caccagcggg cacctgcctc
      181 ctcgcgggct gcggctacac gggggcgcgg ctggcgcggc gcctgatggg ccggtggccc
      241 gtgctggcgc tggtgcgctc ggcggcttcc gcggcggccc tggcggccga gggcatccgg
      301 gcccgggctg tggacctgga cgggggcggg ggcttcgcgg tcccgccgga cctggcctcg
      361 gtggtctatc tggctccgcc accgggggag ggcgacggcg atccccgctt ccagcggttc
      421 ctggagggcc tgggcggggt ccggccgcag gtactggtct acctgagcac cacgggggtg
      481 tacggagacg cgcagggcgc ttcggtggat gaggccacgc cgcccgcgcc cggggacgcc
      541 cagggccgcc ggcggctggc tgcggagcag gcgggctcgg cctggtgcgc cgagcggggc
      601 atccggtggg tggcgctgcg cgtgtccggc atctacggcc cccaccgcct gccgctggac
      661 cgcctgcggg cgggcgagcc ggtgctccgg cccgaggatt cgggacccgg caaccgcatt
      721 caggtggacg atctggcggc ggcctgcgag gcggccctgg accgccccct gtcgggcccg
      781 gtcaacgtga cggacgggga ctcccgcagc atcggggcct tcctggagct gggggctcac
      841 ctcgcgggcc tgccgccgcc ccgccgcgtg accctggccg aggcccgcca ggccatcagc
      901 cccggcatgc tggccttcct cctggcctcg cggcgggtgc tcaaccggcg cctgacggag
      961 gatctgggcg tgagcctgcg ctatccggac ccggaagcgg gcctccgcgc cagcctggaa
     1021 gagatgggga tcagtaccgc agcacgctga acaccggcag cccctcgacc ttttcgcggc
     1081 cgggcaggga ggccagctcg atgaagaccg tgagggccac gggctgggcg ccggtcttct
     1141 ggaccaggcg ctgggcggcg gcggcggtgc cgcccgtggc catgacatcg tccacgatga
     1201 gcacgcggtc gccggggccg aaggcatccc tgtggatctc gagggcgtcc gtgccgtact
     1261 ccaggccgta ggcctccttg tgcgtggcca tgggcagctt gccgggcttg cgggcgggca
     1321 cgaagcccac gcccagcttc tgggccaggg cgctgccgaa gatgaagccc cgggattcca
     1381 gccccagcac gtgggtgggc tggagggtca gcacgggctg ggccatggcc gccacggcct
     1441 cggcgaaggc ctcggcgtgg gagagcaggg gcgtgatgtc gcggaagagg atcccggctt
     1501 tcgggaagtc cgggacgtcg cggacgaagg cggtgagggg cgtcgtaagg gtcatggcta
     1561 cctgcggatc tcgaaaggat ggggaaggga ggatcccata tcctgcgggc tccagtccag
     1621 ccgtcccacg gcggcgaagg ccggaccccg ggccagggag gcccggaagg ccgccagggc
     1681 ggcctcgggg cccgccgcct ccccggacac cgacccgtcc gcctcgttgc gcacccagcc
     1741 ggacagatcc agggcctggg cctcccgggc ggcgaagcgg cggtagccca ccccctggac
     1801 ttccccgtgg acgcggaagc ggaccgtcac cggattatcc gttgaaggcc gaatcgaagt
     1861 cggcctgccg ggccagggtc tcggggcagc ccaggtccag gcgcaggggg gtgacgctgg
     1921 ccaggccctc gaacacggcc tcggcatcac tgcccgcgcc cttggcgtag gtggggcccg
     1981 catcgccacc gatccagaaa tagggggtgc tgcggggatc gctgcggcgc tccaccaggt
     2041 cgtggtaggc gcggctgtcc tggctcgtga ggcggaagcc cttgggctcg cccttgggga
     2101 agttgacgtt ccagatgcgg ttgcccggca ggtccatggc ctcccagcgc tcgaggaacc
     2161 ggccgatcca gggctccgcc tgctccagcg aaccctgggg atggatggag aaggccgcgg
     2221 cccgggcgcc ctgcagccgg ccctcgaagg ccgcgcccac ggtgcccgaa tagaacacgt
     2281 cctcgcccag gttgaagccg tggttgatgc ccgagagcac ccagtccggc ctgcggccca
     2341 gcacctcgca gacccccagc agcacgcagt ccacgggggt gccgtcgcag gcgtggcggt
     2401 cgggcccgat ctcgtgcagg cggaggatgt tgtgcaggct cagggccgag gagatggccg
     2461 agcggttgcg gtccggggcc acggtgacca cccggccgaa gcgggaggcc gcccgggcca
     2521 gggccgccag ccccggagcc cagaggccgt cgtcgttggt gagcaggatc aggcgttcgg
     2581 acatggcccc agtgtatccc ccgggatcct ccgaagaatg cgaggatggg tcggttccca
     2641 tggattccga tctccccctc gccccccctg ccgccctggc cgtcgcgccc ctggatgggg
     2701 ccctgccctg ggaccgcacg gcggtcctgg cgcgtctccg tgaaaggatc gtggccttcg
     2761 cggcatcccg gtatgcaggg tcccatgcgg aggacctggc ccaggaggtg ctggtgctga
     2821 tccacgagaa gtacggccac ctggagcggc tggaggacct ggtccccctg gccttccaga
     2881 tcctgcgctt caagctggcg gcccaccggc gcaaggccgc ccgccggggc gagttcgatg
     2941 cggtggatgt ggacgagttc ccgccgccct cggacgcgcc ggatccggcg gcggtgctgg
     3001 agcgcaagga gctgctggcc cggctcatgg gcggcatcgc ccgcatgggc gagcgctgcc
     3061 gggagctgtt ccgcctcaag ctccagggcc ggaccttcgc ggagatccag gggctcctgg
     3121 gcgcggccaa tctgaacacc gtctacacct gggaccaccg ctgccggaag cagctgctgg
     3181 actcgctggg tggcgggtgg gaacggtccg gaaagggggc gccatgaaac gcgccgaggc
     3241 cgagaagctg ctgggcggct acgccacggg gaccctcacc gaatcggagc ggcgcatgct
     3301 gtgcgaggcg gccctggcgc accaggacct ctttgacgcc ctggcggacg aggaggccct
     3361 gcgggagctg ctggcggatc cggcagcccg ggcccagctg ctggcggcgc tggcgccatc
     3421 ctccgagctg gcccccccga aggtggtgcc cttctggcgg cgtcccggcg tcatcggcgc
     3481 cgccgcgggg ctgcttgtgg ccaccaccgc cgggctggtg gtcctgcgca gtcccgaggg
     3541 cgtacctcct ctggcgaagc
//
LOCUS       DASUDT010000404         5853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1277859, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000404 DASUDT010000000
VERSION     DASUDT010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277859"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1030)
                     /locus_tag="VFV26_08270"
     CDS             complement(56..1030)
                     /locus_tag="VFV26_08270"
                     /inference="COORDINATES: protein motif:HMM:NF016330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HEX4846199.1"
                     /translation="MISHTDRFGATWWGRLWIHGLEKLGDDYENRLPRGKKYAEDGHV
                     SHFGVQPGEIQARVHGRKTYNVTLGLPALTPAQWDKALARIAQESRFVASLLAGEMPQ
                     GLDETFREAGASLYPRVPKELQTHCDCPDWANPCKHVAAVCYVMAEALDRDPWLLFDL
                     RGKTRDEVMQALQSALEAAAVAAPKKRGRPPKKQQTVADLLKREQAQPEPWRRLPDEA
                     YDALPMPLPEISIPRVIPPDPSVFTQLGPLPHARIETSLCLAALMHRTAQWVLQQIEE
                     GPRRLDDGEGEGDLEQPASPFDTPMPPAAKPGRNWRHKKRRWGKKNVQ"
     gene            complement(1027..4218)
                     /locus_tag="VFV26_08275"
     CDS             complement(1027..4218)
                     /locus_tag="VFV26_08275"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4846200.1"
                     /translation="MQIRVASLSPFVHSLLPTAYNPFMLNPFLQYRPQDRGFLLCMPE
                     AVEPAEWARALRTLPGEMQGRERLTPAKAQIFLPDATLVEMHAVPLRWQRAYPWLSSL
                     ALNPGNAGPTLRYWAAALRMLQSLVVRGALLPQLDTKGNPWKARWGVSLTSPSDRSAL
                     RQLAEAMPPATLAFPENDTWAFTKTLALGELDAFDIEDDLAMPPSVDTVLSAFLEDGA
                     DFIMRFVAGGLRAGDDPRLGLIHRLRGHKRDRLPWDERIMVALSHQLPEFPTIGITER
                     TLGEQLAQWSEGARPQWVRPSLRLEAPAVPAASQTVQDADRLAEEGWILKVGLETEAG
                     ADIGVAKLWEPSTEPEVLQARQVLLRGLARAVPFFPALDRALSGQRPEDLVLRPTEAW
                     SFLTRGAAQLKEAGFLVHIPEALADFGGAKRLRAKVRLGARSVIDSVSETQAGLDGTV
                     SADWSLMLGDDALSVEDFAQMVSLKHPLVAWKGKWVALDPETLKQIQTVIQASRGAGF
                     ESMTKGEALAAALTGTARIPGVSEAIEVEVAGDFGAALEDLKVLPDKPITQPASFHGQ
                     LRPYQLRGLAWLEGLSRLGLGGILADDMGLGKTIQVLALLLHRQEQSPQHGPATLLVC
                     PTSLLGNWERELAKFAPSLPVFVHHGNNRDRLPATFKPHTLVLTTYGVVRREADTFAV
                     HPWGMVVVDEAQAIKNAGSAQAKAIRKLRGNFRLALTGTPIENRLTELWAIMSAGLPG
                     YLGSESQFKERFATPIEKYRDPDAANELRQRIGPFILRRLKSDKSIIQDLPEKNEMKV
                     FTTLSREQAELYQYRVEKMDEELDAVSGIERRGRILALLTHLKQICNHPSQFLKAQGP
                     YRGRSGKLDRLTEMLEEVVEAGERAIVFTQFKEMGDRLQVHLQEALGFEPPFLHGGTT
                     REGRDELVRSFQEDPDSAPVLLLSLKAGGVGLNLTAATHVFHFDRWWNPAVEDQATDR
                     TYRIGQTKNVQVHKLVTIGTLEEKIDALLESKRDLADRVVGTGEGWLTELDDEALRRL
                     VALDPDAEVLDTEENGDDSGPHPVYRQAREVAP"
     gene            4200..4631
                     /locus_tag="VFV26_08280"
     CDS             4200..4631
                     /locus_tag="VFV26_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HEX4846201.1"
                     /translation="MRLGFASDHAGFDLKERLKAWAQGQGHDVVDFGTDGSASVDYPD
                     FAHRAAEGRDQWERLVLVCGSGIGISMAANRHAGIRCALVTSPEHAALARQHNDANAI
                     AFGQRLTDPLKAEYYLKLFLETPFEGGRHQGRVDKIDGKGC"
     gene            4631..5347
                     /gene="rph"
                     /locus_tag="VFV26_08285"
     CDS             4631..5347
                     /gene="rph"
                     /locus_tag="VFV26_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX4846202.1"
                     /translation="MRRDDDLRSLSFETGVQLHAAGSCLIRLGRTHVLCAASLEAKVP
                     GWMKGRGTGWLTAEYGMLPAATNTRMDREAAKGKQQGRTVEIQRLIGRSLRQAVDLAA
                     LGERTLSVDCDVLNADGGTRCAAITGAWVAVALALRSQGLEAALVRQVAAVSAGIVES
                     GEGRRGLVLDLEYEEDHRAAVDCNLVAARPAAGGELELVELQGTGEGRSFSRVEAVAL
                     MDLGLAGCAALMEAQRKALG"
     gene            5344..>5853
                     /locus_tag="VFV26_08290"
     CDS             5344..>5853
                     /locus_tag="VFV26_08290"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX4846203.1"
                     /translation="MKRSLLVPARNLMLIGLPALLAGQVVPPPGAEAAPRRIEVMVQP
                     PDMVFRFAPRVEIPGMPRVGLALSGGGARGLAHIGVIQRLEEIGLPLGSVTGTSAGAL
                     VGALYASGFSGREIEDLFRRRDLTRAFLEPLLRNPGETLGEQEERESTFLSVERQKGQ
                     ISLAQGLRTG"
BASE COUNT          786 a         1885 c         2266 g          916 t
ORIGIN      
        1 tggcggcggg ggcgttgggg gtgctgatgg tgcgcatggg aactcctgga actggttact
       61 ggacgttctt cttgccccag cgccgcttct tgtggcgcca gttgcggccg ggcttggcgg
      121 cggggggcat gggggtgtcg aagggcgagg cgggctgctc taggtcgcct tcgccctcgc
      181 cgtcatcgag gcggcggggg ccctcctcga tctgctggag cacccactgg gccgtgcgat
      241 gcatgagggc ggccaggcag aggctggtct cgatgcgggc atggggcagg ggtcccagct
      301 gggtgaacac cgagggatcc ggcggaatca cgcgggggat gctgatctcg ggaaggggca
      361 tgggcagggc gtcgtaggcc tcgtccggca gccgccgcca gggctcgggc tgggcctgct
      421 cgcgtttgag aaggtccgcc accgtctgct gtttcttggg gggccgtccg cgcttcttgg
      481 gggcggccac ggcggcggct tccagcgcgg actggagggc ctgcatcacc tcgtcgcggg
      541 tcttgccgcg caggtcgaag agcagccagg gatcccggtc cagggcctcg gccatcacgt
      601 agcacacagc ggccacgtgc ttgcaggggt tggcccagtc ggggcagtcg cagtgggtct
      661 gcagctcctt ggggacccgc ggatagaggc tggcgcccgc ctcgcggaag gtctcgtcca
      721 ggccctgggg catctcgccc gccagcagcg aggccacgaa gcggctttcc tgggcgatgc
      781 gggccagggc cttgtcccac tgggccgggg tgagggcggg caggcccagg gtcacgttgt
      841 aggtcttgcg gccatggacc cgggcctgga tctcgccggg ctgcacgccg aagtgcgaca
      901 cgtggccgtc ctccgcgtac ttcttgccgc ggggcaggcg gttctcgtag tcgtccccga
      961 gcttctcgag gccgtggatc cagaggcggc cccaccaggt ggcgccgaag cggtcggtgt
     1021 ggctgatcat ggcgccacct cccgggcctg acggtagacg gggtgggggc cggagtcgtc
     1081 gccgttctcc tccgtatcca gcacctcggc atcgggatcc agggccacca ggcggcgcag
     1141 ggcctcgtca tccagctcgg tgagccagcc ttcgccggtg cccaccacgc ggtctgcgag
     1201 gtcgcgcttg gattccagca gggcgtcgat cttctcctcc agcgtgccga tggtgaccag
     1261 cttgtggacc tgcacgttct tggtctggcc gatgcggtag gtgcggtccg tggcctggtc
     1321 ctcgactgcc ggattccacc agcggtcgaa gtggaagacg tgggtggccg ccgtgaggtt
     1381 gaggcccacg ccgccggcct tgaggctgag cagcagcacc ggcgcggaat cgggatcctc
     1441 ctggaagctg cgcaccagtt cgtcgcggcc ttcgcgcgtg gtgccgccgt ggaggaaggg
     1501 cggctcgaag cccagggcct cctggaggtg cacctgcagg cggtcgccca tctccttgaa
     1561 ctgggtgaag acgatggcgc gctccccggc ctcgaccact tcctccagca tctccgtgag
     1621 gcggtccagc ttgccgctgc ggccgcggta ggggccctgg gccttcagga actggctggg
     1681 gtggttgcag atctgcttga ggtgcgtgag cagggccagg atgcggccgc ggcgctcgat
     1741 gccgctgacg gcgtccagct cctcgtccat cttctccacg cggtactggt acagctcggc
     1801 ctgctcgcgg ctcagcgtgg tgaagacctt catctcgttc ttctcgggca ggtcctggat
     1861 gatgctcttg tcgctcttga ggcggcgcag gatgaagggg ccgatgcgct ggcgcagttc
     1921 gttggcggca tcgggatcgc ggtacttctc gatgggcgtg gcgaagcgct ccttgaactg
     1981 ggattcgctg cccaggtagc ccggcagccc cgcgctcatg atggcccaca gctccgtgag
     2041 gcggttctcg atgggcgtgc ccgtgagggc gagacggaaa ttgccgcgca gcttgcggat
     2101 ggccttggcc tgggcggaac cggcgttctt gatggcctgg gcctcgtcca ccaccaccat
     2161 gccccagggg tggacggcga aggtgtccgc ctcgcggcgc accacgccgt aggtggtgag
     2221 caccagggtg tggggcttga aggtggcggg caggcggtcc cggttgttgc cgtggtgcac
     2281 gaagaccggc aggctggggg cgaacttggc cagctcgcgc tcccagttgc ccagcagcga
     2341 ggtggggcag accagcaggg tggccgggcc gtgctggggg ctctgctcct gccggtgcag
     2401 cagcagggcc agcacctgga tggtcttgcc caggcccatg tcgtcggcca ggatgccgcc
     2461 caggcccagg cgggacaggc cttcgagcca ggccaggccg cgcagctggt aggggcgcag
     2521 ctggccgtgg aagctggcgg gctgggtgat gggcttgtcg gggaggacct tcaggtcctc
     2581 aagggcggcg ccgaagtcgc cggcgacctc cacctcgatg gcctcgctga ccccggggat
     2641 gcgggccgtg cctgtgaggg cggcggccag ggcctcgccc ttggtcatgc tttcgaaccc
     2701 cgcgccgcgg ctggcctgga tgacggtctg gatctgcttg agggtctcgg ggtccagggc
     2761 cacccacttg cccttccagg ccaccagcgg gtgcttgagg ctcaccatct gggcgaagtc
     2821 ctcgacgctc agggcgtcgt cgcccagcat gagggaccag tcggcgctca ccgtgccgtc
     2881 gagtccggcc tgggtttccg acacggagtc gatgacgctg cgggccccca ggcgcacctt
     2941 ggcccgcagg cgcttggcgc cgccgaagtc ggccagggcc tcggggatgt ggacgaggaa
     3001 gcccgcctcc ttcagctggg ccgcgccacg ggtgaggaag ctccaggcct ccgtaggccg
     3061 gagcaccaga tcctccgggc gctggcccga cagggcccgg tccagggcgg ggaagaaggg
     3121 cacggcgcgg gccaggccgc ggagcagcac ctggcgggcc tgcaggacct ccggttcggt
     3181 ggagggctcc cacaatttcg ccacgccgat atcggcgccg gcttcggttt ccaggcccac
     3241 cttgaggatc cagccctcct ccgccaggcg gtcggcgtcc tgcacggtct ggctggcggc
     3301 ggggacggcg ggggcctcca ggcgcaggct gggccgcacc cactgggggc gggcgccctc
     3361 gctccactgg gccagctgct cgcccagggt gcgctcggtg atgccgatgg tggggaattc
     3421 cggcagctgg tgggagaggg ccaccatgat gcgctcgtcc cagggcaggc ggtcccgctt
     3481 gtggccccgc agccggtgga tgaggcccag gcgcggatca tcgcccgccc gcagcccccc
     3541 ggccacgaac cgcatgatga aatcggcgcc gtcctccagg aaggcgctca gcaccgtgtc
     3601 cacggagggc ggcatggcca ggtcgtcctc gatgtcgaag gcgtccagtt cgcccagggc
     3661 cagggtcttg gtgaaggccc aggtgtcgtt ctcggggaag gcgagggtgg cgggcggcat
     3721 ggcctccgcc agctgccgca gggccgagcg gtccgagggg ctggtgaggc tcacgcccca
     3781 gcgggccttc caggggttcc ccttggtgtc gagctggggc agcagggcgc cgcgcaccac
     3841 cagcgactgg agcatccgca gcgccgcggc ccagtagcgc agggtggggc cggcgttccc
     3901 ggggttcagg gccagggagg acagccaggg gtaggcccgc tgccagcgca ggggcacggc
     3961 gtgcatctcc accagggtgg cgtccggcag gaagatctgg gccttggcgg gcgtgaggcg
     4021 ctcgcggccc tgcatctcgc cgggcagggt gcgcagggcg cgggcccact cggcaggttc
     4081 caccgcctcg ggcatgcaga gcaggaagcc gcggtcctgg ggacggtact ggaggaaggg
     4141 gttcagcatg aaggggttgt aggctgtagg aagcaggctg tggacgaagg ggctgaggga
     4201 tgcgactcgg atttgcaagc gatcatgcgg ggttcgacct gaaagaacgg ctcaaggcct
     4261 gggcgcaggg gcagggacat gacgtggtgg atttcggcac ggacggttcg gcctcggtgg
     4321 actatccgga tttcgcacat cgggcggcgg agggccggga tcaatgggag cgcctggtgc
     4381 tggtctgcgg atccggcatc ggcatcagca tggcggccaa tcgccatgcc ggcatccgct
     4441 gcgcgctagt gacctcccct gagcacgcgg cactggcccg gcagcacaat gacgcgaacg
     4501 ccatcgcttt cggccagcgg ctgacggatc cgctcaaggc ggaatactac ctgaaattgt
     4561 tcctggaaac accttttgaa ggcggacgcc accagggacg ggtggacaag atcgacggga
     4621 aggggtgctg atgcgccgcg acgacgacct ccggagcctg tccttcgaga ccggcgtcca
     4681 gctccacgcc gccggctcct gcctgatccg gctgggccgc acccatgtgc tgtgcgcggc
     4741 cagccttgag gcgaaggtgc cgggctggat gaaggggcgg ggcacggggt ggctcacggc
     4801 ggaatacggc atgctgcccg cggccacgaa cacccggatg gaccgggagg ccgccaaggg
     4861 caagcagcag ggccgcacgg tggagatcca gcggctcatc ggccgcagcc tccgccaggc
     4921 ggtggacctg gccgccctgg gtgagcgaac cctttcggtg gattgcgacg tgctgaacgc
     4981 cgacggcggc acccgctgcg ccgccatcac gggggcctgg gtggccgtgg ccctggcgct
     5041 gcgctctcag ggactggagg cggccctggt gcgccaggtg gcggccgtga gcgccggcat
     5101 tgtggaatct ggcgaggggc ggcggggcct ggtgctggac ctggagtacg aggaggatca
     5161 ccgggccgcc gtggactgca acctggtggc ggcacggccc gccgccggcg gagagctgga
     5221 gctggtggaa ctccagggca cgggcgaggg gcgttccttc agccgggttg aggcggtggc
     5281 cttgatggac ctgggcctgg ccggttgcgc tgcgctcatg gaggcccagc ggaaggccct
     5341 cggatgaagc ggagcctgct ggtcccggcc cggaacctga tgctgatcgg gcttccggcc
     5401 ctgctggccg gccaggtggt tcctccgccc ggcgcggagg cggcgccgcg gcgcatcgaa
     5461 gtcatggtcc agccgccgga catggtgttc cgcttcgcac cccgggtgga aatcccgggc
     5521 atgccgcggg tgggcctggc cctcagcggg ggcggggccc ggggcctggc ccacatcggc
     5581 gtcatccagc gcctggagga gatcggcctt cccctgggca gcgtcacggg aaccagcgcc
     5641 ggggccctgg tgggggccct gtacgccagc gggttttcgg gccgggagat cgaggacctc
     5701 ttccgccgcc gggacctgac ccgcgccttc ctggaaccgc tcctccgcaa cccgggcgaa
     5761 accctgggcg agcaggagga acgcgagtcc accttcctgt ccgtcgagcg gcagaagggg
     5821 cagatcagcc tggcccaggg tctgcgcacc ggc
//
LOCUS       DASUDT010000405         3243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_283521, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000405 DASUDT010000000
VERSION     DASUDT010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283521"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1486)
                     /locus_tag="VFV26_08295"
     CDS             complement(<1..1486)
                     /locus_tag="VFV26_08295"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEX4846204.1"
                     /translation="MNLPFTHPWLLAPFAAAALVALALALRAHLRPGLGVQVVGQRPL
                     WQGLGMALMLAGLGIGLAEPRWGMPEFPRLTVHVVLDVSRSMTVADAGGRPRWDAAVN
                     ALDRLWSQPQSGLRWSLDLLAGDAIPLQPPGEDRTLLRESLRAVVPGGVGSPGTSLGR
                     GLHQVAAQADRETPAVILLLSDGEETWEPPEAALERASATLKQAGLPICVLAFGDGQP
                     HAVPAKPGAEGQLPAAEPALSTARPDFLARLARATGGQVFTNGDTAIAGLQALAAGKA
                     PLPARRSLQPAHPEAGAWVALAGLALWLAFAGKPMARWRPALLLLLAMVPLRAQSGGP
                     WAPPSVKAWLAQRALEDGNLPGARRWRPGDAEPAHLLLAAQIDLRTGSPDEALKTLSP
                     LVGQGVPRPLPPWRAPALLLAARAQRDARRPAEARALLERLLLEQPGQRDAIHDLQTL
                     VKDAAPPPPPDPRKPPPPPPPRPSMGAQQDELEGLKQRLPKPPKT"
     gene            complement(1483..2439)
                     /locus_tag="VFV26_08300"
     CDS             complement(1483..2439)
                     /locus_tag="VFV26_08300"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX4846205.1"
                     /translation="MIALRHPLLLLVAVPLVVWAWRVIYRWGIPSSRPSSALARRSSH
                     WLPPLLALALGFAAAGPEWRAPLRGAAPVVDFAVVLDGSSSMKILDRPDEDRWHAARR
                     TLAQFVLRRPDDRFALVLFSAHPVTLSPLTADHQRLLRMLARLDLDSRDDGTAIGSGL
                     MTAVRRLEESPARSRVILLVTDGVQNRGRVTPLEAAEEARRQGIRIHAVAMGTAGESL
                     VPLEGGGFARLRVEVDHTTLKEVAHLTGGESFSAEDPGGLARSLAAVDQLEKTLLPVD
                     PPTEGRPLAGWCLLAAALLALPLAADLAFKRGKPRPAWIVEP"
     gene            complement(2436..3188)
                     /locus_tag="VFV26_08305"
     CDS             complement(2436..3188)
                     /locus_tag="VFV26_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846206.1"
                     /translation="MAMALMAWAAPAWKAPVRLKLGALQTLELREEDPARPALPRPTV
                     EDRLGPLRLRSMEPLPDGRGWRFQVQALEPGLAVIPPLDLGNGQRSPELRLDVPRTIP
                     FGGPWVGFGGGNDDQLPAIPFPWAWASLLLLPPLALLAWGVHRWRQGMARRRLRHAAH
                     AFRRHWPPPDKARHTLDAAHALGRDLLAARFGEAARAWGPTDFQARSLGPWDQWAQSL
                     DAARFGRTEPPFPAPGPLMAILDARSGRKDGP"
BASE COUNT          434 a         1134 c         1298 g          377 t
ORIGIN      
        1 ccgttttcgg cggcttgggg agacgctgct tgaggccctc cagctcatcc tgctgggcgc
       61 ccatgctggg gcgcggaggc ggcggcggcg ggggcttcct ggggtctggc ggcggcgggg
      121 gcgccgcatc tttcacgagg gtctgaaggt catggatggc gtcccgctgg cccggctgct
      181 ccagcagcag gcgctccagc agggcccggg cctcggcggg gcgcctggcg tcccgttggg
      241 cgcgggcggc caggagcagg gctggcgcgc gccagggggg cagcgggcgc gggacgccct
      301 ggcccaccag gggcgacagg gtcttcaggg cttcatcggg agatcccgtg cgcaggtcga
      361 tctgggcggc cagcagcagg tgggcgggct ccgcatcccc agggcgccag cgccgggcgc
      421 cggggaggtt gccgtcctcc agggcccgct gggccagcca ggccttcacg ctgggcgggg
      481 cccatggccc gccgctctgg gcgcgaaggg ggaccatggc cagcagcaga agcagcgcgg
      541 gccgccagcg ggccatgggt tttcccgcga aggccagcca gagggcgagc cccgccagcg
      601 ccacccaggc tcccgcctcg ggatgggcgg gctggaggga acggcgggca ggcaggggcg
      661 ccttgccggc cgccagagcc tgcagcccgg caatggcggt gtctccgttg gtgaagacct
      721 ggccgccggt ggcccgggcc aggcgggcga ggaagtccgg gcgggcggtg ctgagggcag
      781 gttccgccgc ggggagctgg ccttcggcac cgggtttggc tgggaccgcg tggggctggc
      841 catctccgaa ggccagcacg cagatgggca gccccgcctg tttcagggtg gcggaggccc
      901 gctccagggc agcctcgggg ggctcccatg tctcctcccc atcgctcagc agcaggatca
      961 cggctggcgt ctcccgatcc gcctgggcgg ccacctggtg caggccccgg cccaggctcg
     1021 tgcccggcga tcccaccccg cccggcacca cggcgcgcag cgactcgcgc agcagggtgc
     1081 ggtcctcccc gggcggctgg agggggatgg catcaccggc gagcagatcc aggctccacc
     1141 gcaggcccga ctggggctgg gaccagaggc ggtccagggc attcaccgcc gcgtcccagc
     1201 gggggcggcc gcccgcatcg gccacggtca tggaacggct gacatccagc accacgtgca
     1261 ccgtgagccg cggaaactcc ggcatccccc agcgcggttc cgccaggccg atgcccaggc
     1321 ccgccagcat cagcgccatg cccagcccct gccacagcgg ccgctgcccc accacctgca
     1381 cgcccaggcc cggccgcaga tgggcccgca gcgccagcgc cagcgccacg agtgccgccg
     1441 ccgcgaaggg cgccagcagc caggggtggg tgaagggcag gttcatggct ctacaatcca
     1501 ggcgggtcgg ggcttgccgc gcttgaaggc caggtcggcg gccaggggca gggccagcag
     1561 ggcggcggcc agcaggcacc agccggccag ggggcggcct tcggtggggg gatccacggg
     1621 cagcagggtc ttctccagct gatccacggc ggcgaggctg cgggcgaggc cgccgggatc
     1681 ctcggcgctg aaggattcgc cgcccgtgag atgggccact tccttcagcg tggtgtgatc
     1741 cacttccacg cgcaggcggg cgaatccgcc gccttccagg ggcaccaggc tttcaccggc
     1801 ggtccccatg gcgacggcgt ggatgcggat gccctggcgg cgggcctcct ccgcggcttc
     1861 caggggggtc acgcggcccc ggttctgcac gccgtccgtg acgaggagga tcacgcggct
     1921 gcgggcgggg ctttcctcca ggcgccgcac cgcggtcatg aggccggatc cgatggccgt
     1981 gccgtcatcg cggctgtcca gatcgagccg cgcgagcatg cgcagcaggc gctggtggtc
     2041 ggcggtgagg gggctgaggg tcacggggtg ggcgctgaag agcaccaggg cgaagcggtc
     2101 gtcgggccgc cgcaggacga actgggccag ggtgcggcgg gcggcatgcc atcggtcttc
     2161 atcgggccgg tcgaggatct tcatgctgct gctgccgtcc agcaccacgg cgaaatccac
     2221 gacgggggcc gcgccgcgaa ggggggcgcg ccactcgggg cccgccgcgg cgaagcccag
     2281 ggccagggcc agcaggggcg gcagccagtg ggagctgcgc cgggccaggg cgctggaagg
     2341 ccgcgacgag ggaatgcccc agcggtagat cacccgccag gcccagacca ccaggggcac
     2401 ggccaccagc agcaggaggg gatggcgcag ggcgatcatg gaccgtcctt ccgcccgctc
     2461 cgggcatcga gaatcgccat caggggcccg ggcgcgggga agggcggctc tgtacgcccg
     2521 aagcgggcag cgtccaggct ttgcgcccac tggtcccagg gcccgaggct gcgggcctgg
     2581 aagtccgtgg gcccccaggc ccgggcggcc tcgccgaacc gggcggccag caggtcgcgg
     2641 cccagggcat gggccgcgtc gagggtgtgg cgggccttgt ccgggggggg ccagtggcgg
     2701 cggaaggcat gggccgcatg gcgcaggcgg cgccgggcca tgccctgccg ccagcgatgg
     2761 acaccccagg ccaggagggc caggggcggc agcagcagca ggctggccca ggcccagggg
     2821 aaggggatgg cgggcagctg gtcgtcgttg ccaccgccga agcccaccca gggcccgccg
     2881 aaggggatgg tgcggggcac gtcgaggcgc agctcggggc tgcgctgccc gttgcccaga
     2941 tccagggggg ggatcaccgc gagtcccggt tccagcgcct gcacctggaa gcgccatccc
     3001 cggccgtcgg gcagaggttc catggaccgc agacgcagcg gccccagacg gtcctccacc
     3061 gtgggccgcg gcagcgcggg ccgggcggga tcctcctccc ggagctccag ggtctggagg
     3121 gccccgagtt tgagtctgac cggcgccttc caggcggggg cggcccaggc catcagggcc
     3181 atcgccatca agaatgccgt tttcccacta ctcggaaccc gcatgcggat tccgagtagt
     3241 gac
//
LOCUS       DASUDT010000406         5240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1255920, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000406 DASUDT010000000
VERSION     DASUDT010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255920"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..2032
                     /locus_tag="VFV26_08310"
     CDS             122..2032
                     /locus_tag="VFV26_08310"
                     /inference="COORDINATES: protein motif:HMM:NF025011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-associated domain-containing protein"
                     /protein_id="HEX4846207.1"
                     /translation="MAFTHYQLLSNCSDEQLRTICERRRLPIPLRWEDGAEGRIRLLK
                     TMVFHLEDHKRLSDTLADLDSGSLVALKHLANEGALPAPPLIETLRDLGLILPDGDGW
                     TVAERVADALDDFDDGALTFQAPADVKLRDAEPFRFSLALTSVLLRCVAGLRVLKGGL
                     PAKKELGQLMQRNAMLQEEQDATLLFTLLHRLGLLWSREGRVETLLPAVTSHPPRWVA
                     ERAFASLLEHDLKAWGMPPAEDRHFVMQHLLERRGQALAVQPFLAFLKTLHPLDEERT
                     RTVFLPFLGRMGIVQSDEGFAHLRLSEHGEALAHEYLLRDLKATAAHWQPLELDQPMI
                     MQPTLELLTPLLQNPHRLLQLAQLADVEALDAMGTFRVSHATLVRALDAGVPLDDLGQ
                     RLGATTQALPQPLLQLLEDLSRRVGEVEVHQGVRLVRARTAHLADELKLRPELAPLKL
                     ASLSDTVLEVRGDGNAHALLKQAGFMPKPGRFLALSVDSDEKLYLWALAALAFVDEKG
                     MNHHLEPVQQMVRSALQRLHDEDPALYQEVQRRIPMLHLGGEDQLAEEVQRILEYAAG
                     HTLMVELTYLPPAAHRTQLRRVSPRTIQEDHLLAFCHLHQEEMAFRLTRIQGVKLLNE
                     RGWTPANHSQAG"
     gene            complement(2132..2419)
                     /locus_tag="VFV26_08315"
     CDS             complement(2132..2419)
                     /locus_tag="VFV26_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846208.1"
                     /translation="MASNPLLLLILLLTALAAVLAGMGVFSNSRPPDPRLNGLMNDLD
                     DIKGVLSQLQKSVLQTERKLEKEIQSARNENREVVEKLADVLDKRLKELVG"
     gene            complement(2473..2988)
                     /locus_tag="VFV26_08320"
     CDS             complement(2473..2988)
                     /locus_tag="VFV26_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846209.1"
                     /translation="MSWSDPARRFEPAEDVQLRAELRDLLGLGPVAAKASVAPDAELT
                     ALAEDLRREAQRRRRTERKRPTWGLLAAAALPLLAVLAGLGTWGFQQKQRADGLALQA
                     QRQEQELTQLAALHATEVARERQAREAVQEQLQLASKKGGRKAEPYLVIPVEKPLKFQ
                     GDDYQRVKQKP"
     gene            complement(2975..3490)
                     /locus_tag="VFV26_08325"
     CDS             complement(2975..3490)
                     /locus_tag="VFV26_08325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX4846210.1"
                     /translation="MEQSPQETPFGTKEAFHAAFAELYPRLVSYARRYGATFPEDIAQ
                     EAFVILMQREVQVEHPTAFLYGTVRTLSLTERRPMKNQNLSLEAVAEPGLAGGADDMV
                     LNQEVRERMRLLSPTFREALWLFVVEGLSIREIADILGIPEATVKTRIHRAKAQLKDQ
                     LNPSGGVHVLV"
     gene            3554..4366
                     /locus_tag="VFV26_08330"
     CDS             3554..4366
                     /locus_tag="VFV26_08330"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX4846211.1"
                     /translation="MDSPLRAWRDTLEELGVMGLVHEPVEAPPEPATPNPAAPRPAPA
                     QPRPAPRPAPAPTPAAYAPPSDPVGCPPADAVAAAGSLPDLQRAIQGCLACPLGPGRL
                     KFVFGEGDPRARLMFVGEGPGRDEDQAGRPFVGKAGELLDKMIVAIGLRREDTYIANV
                     VKCRPPDNRTPTSDEARACLGYLRRQIELIQPAVIVSLGATPLRELLGISEGITRVRG
                     QWKRLQIGGREIPVMPTFHPAYVLRQYTQDVRRSVWEDLKAAKEWVDKGAED"
     gene            4409..>5240
                     /locus_tag="VFV26_08335"
     CDS             4409..>5240
                     /locus_tag="VFV26_08335"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4846212.1"
                     /translation="MRLVNVFFFVLMAFVLFVLGNLYLTNHDLLVREVVIFGESIKIQ
                     SVILLAFLLGFLLNVLYTGIMELVRLVRGLNASADTRLVKRISERMQDARDLMAHGLP
                     REAKEILESILEQRKEHIPARLLMGEALMKTGSADEALKLFKALCDEEPDLVEAAYQL
                     AEALVAVRNPDASVTVLTKLAASHPKKALRAWRRLRALHMDAQRWDEAMEAHKKLQTH
                     FAADLTQGEKAQGAALAYQVGLAKVEEDHFKDAAQVFQQVIKDEPEFVPAYLSLGRCM
                     I"
BASE COUNT          803 a         1883 c         1726 g          828 t
ORIGIN      
        1 cccccacccc catcaccgtc agcgtgggca ccctcaccgc ccagtagtgc ctcccctttt
       61 ttgtgcgtga gcgttccgtg gttccgtggg acactggagg atcatctgta cccaggtgtc
      121 catggcgttc acccactatc agctcctctc gaactgctcg gatgagcagc tcaggaccat
      181 ctgcgaacgc cgccggctgc ccatccccct ccgctgggag gatggcgccg agggccgcat
      241 ccgcctgctc aagaccatgg tcttccacct ggaggaccac aagcggctct ccgacaccct
      301 ggcggatctg gacagcggct ccctggtcgc cctgaagcac ctcgccaatg aaggcgccct
      361 gcctgctccc ccattgatcg agaccctgcg cgacctgggc ctgatcctgc cggacggcga
      421 tggctggacc gtggctgagc gcgtggcgga tgccctcgac gatttcgacg atggcgccct
      481 gaccttccag gcccctgccg acgtgaaact gcgcgacgca gagcccttcc gcttctccct
      541 ggccctcacg agcgtgctcc tgcgctgcgt agcgggcctg cgggtgctga agggcgggct
      601 ccccgccaag aaggagctgg gccagctcat gcagcgcaat gccatgctgc aggaggaaca
      661 ggacgccacc ctgctcttca ccctgctgca ccgcctggga ctgctgtgga gccgtgaagg
      721 gcgtgtggag accctgctgc ccgccgtgac gagccatcct ccgcgctggg tggccgagcg
      781 cgccttcgcc agcctgctgg agcacgacct caaggcctgg ggcatgccgc cggccgagga
      841 ccgccacttc gtcatgcagc acctgctgga gcgccggggc caggccctcg cggtccagcc
      901 cttcctggcc ttcctcaaga ccctccatcc cctcgatgag gagcgcaccc gcacggtgtt
      961 cctgcccttc ctgggacgca tgggcatcgt gcagagtgac gagggcttcg cgcacctgcg
     1021 gctttcggag cacggcgagg ccctggccca cgagtacctg ctgcgggatc tcaaggcgac
     1081 cgccgcccac tggcagcccc tggagctcga tcagcccatg atcatgcagc ccacgctgga
     1141 gctgctgacg cccctgctcc agaaccccca ccgcctgctc cagctggccc agctggcgga
     1201 tgtggaagcg ctcgacgcca tgggcacctt ccgcgtgagc cacgccaccc tggtgcgcgc
     1261 cctcgacgcc ggcgtgcccc tcgacgatct cggccagcgc ctcggagcca ccacccaggc
     1321 cctgccccag cccctgcttc agctgctgga ggacctctcc cgccgcgtgg gcgaggtgga
     1381 agtgcaccag ggcgtgcggc tcgtgcgcgc ccgcacggcc cacctggcgg acgagctgaa
     1441 gctgcgcccc gagctggccc cgctcaagct ggcctcgctg tccgacacgg tgctcgaggt
     1501 gcgcggcgac ggcaacgccc atgccctgct caagcaggcg ggcttcatgc ccaagcccgg
     1561 ccgcttcctg gccctgagcg tggattccga cgagaagctc tacctctggg ccctggcggc
     1621 gctggccttc gtggacgaga agggcatgaa ccaccacctg gagcccgtgc agcagatggt
     1681 gcgctcggcc ctccagcgcc tccacgacga ggacccggcc ctctaccagg aagtccagcg
     1741 gcggatcccc atgctgcacc tgggcggcga ggaccagctg gcggaagagg tgcagcgcat
     1801 cctcgaatac gccgcaggcc acacgctcat ggtggagctg acctacctgc ctccggccgc
     1861 ccaccgcacc cagctgcgcc gggtctcccc ccgcaccatc caggaggacc acctgctggc
     1921 cttctgccac ctccatcagg aggagatggc cttccgcctc acccgcatcc agggcgtgaa
     1981 gctcctgaac gagcgcggct ggacgccggc gaaccacagc caggcggggt gatactggag
     2041 gtacggcctt cggccgctag gctggagtcc gaaggtacgg ccacccagag gtggccgcag
     2101 gatctccagg ctctggtctc cggactgctt ctcagcccac gagttccttc aggcgcttgt
     2161 ccagcacgtc ggccagcttc tcgaccactt cgcggttctc gttgcgggcg gactggatct
     2221 ccttctccag tttgcgttcg gtctggagga ccgacttctg gagctgggac agcacgccct
     2281 tgatgtcgtc gaggtcgttc atgaggccgt tcaggcgggg atccggaggg cggctgttgc
     2341 tgaagacgcc catgcccgcc agcaccgcgg cgagcgccgt gagcaggagg atgaggagaa
     2401 gcaggggatt gctggccatg ggcacacctt gcccttcaga atgccaggat catgccgacc
     2461 gggcgctgat tactaaggct tctgcttcac gcgctggtag tcgtccccct ggaacttcag
     2521 gggcttttcc acggggatga ccaggtaggg ctcggccttg cggcccccct tcttcgaggc
     2581 cagctgcagc tgctcctgga ccgcctcccg ggcctggcgc tccctggcca cttccgtggc
     2641 gtggagggcg gccagctggg tgagttcctg ctcctggcgc tgggcctgga gggccagccc
     2701 atcggcccgc tgtttctgct ggaagcccca ggtgcccagt ccggccagca cggccagcag
     2761 gggcagggcc gcggcggcca gcaggcccca ggtgggccgc ttgcgctcgg tgcggcggcg
     2821 gcgctgggcc tcgcggcgga ggtcctcggc aagggccgtc agttcagcat ccggcgccac
     2881 ggaagccttg gcggccacgg ggccgaggcc cagcaggtcg cggagttccg cccgcagctg
     2941 gacgtcctcg gcgggttcaa agcgccgggc gggatcagac caggacatgc acgcctccag
     3001 aagggttgag ctgatctttg agttgggcct tggcccggtg gatgcgggtc ttcacggtgg
     3061 cttcggggat gccgaggatg tccgcgatct cgcggatgga cagcccctcc accacgaaca
     3121 gccagagggc ctcgcggaag gtgggcgaca gcagccgcat gcgctcgcgc acttcctggt
     3181 tcagcaccat gtcgtcggcc cctccggcca ggccgggctc ggccacggcc tccaggctga
     3241 ggttctggtt cttcatgggg cggcgctccg tgagggacag ggtccggacc gtcccgtaga
     3301 ggaaggcggt gggatgctcc acctgcactt cccgctgcat gaggatgacg aaggcctcct
     3361 gggcgatgtc ctcggggaag gtcgccccgt agcgccgggc atagctcacc agccggggat
     3421 agagctccgc gaaggcggca tggaaggcct ccttggtgcc gaacggggtt tcctgggggg
     3481 actgctccat gcggggctcc gacgccttag gatgcccgat ccggaccgga agttccgggc
     3541 taggctggag gctatggatt cgcctctccg agcctggcgg gacaccctcg aggaactggg
     3601 ggtgatgggc ctcgtccacg aaccggtgga agcccccccg gaaccggcca caccgaatcc
     3661 agccgcgccc cgcccggccc ccgcccagcc ccggcccgcg cccaggcccg cccccgctcc
     3721 caccccggcg gcctatgcac ccccttcaga tcccgtgggc tgcccccccg cagatgccgt
     3781 ggccgccgca ggcagccttc cggacctgca acgggccatc cagggctgcc tggcctgccc
     3841 cctgggcccg ggccgcctga agttcgtctt cggcgaaggc gatcccagag cccggctcat
     3901 gttcgtgggg gagggtcccg gacgggacga ggatcaggcg ggccggccct tcgtgggcaa
     3961 ggccggcgaa ctgctggaca agatgatcgt ggccatcggc ctgaggcgcg aggacaccta
     4021 catcgccaac gtggtcaagt gccgcccccc ggacaaccgc acgcccacct ccgacgaggc
     4081 ccgggcctgc ctgggctacc tgcgccggca gatcgaactg atccagcccg ccgtcatcgt
     4141 cagcctgggc gccacgcccc tgcgggagct gctggggatc agcgagggca tcacccgggt
     4201 gcgcggccag tggaagcgcc tgcagatcgg cggccgcgag atccccgtga tgcccacctt
     4261 ccatcccgcc tacgtgctgc gccagtacac ccaggatgtg cgccgttccg tctgggagga
     4321 tctgaaggcg gcgaaggagt gggtcgacaa gggcgcagaa gactgaagcc cgtcatgtca
     4381 tgctaggtcc agctttcgag gtccgctcat gcgtctagtg aacgtgtttt tcttcgtgct
     4441 catggccttc gtgctgttcg tgctgggcaa cctgtacctc accaaccacg acctgctggt
     4501 gcgcgaagtc gtcatcttcg gcgaaagcat caagatccag agcgtcatcc tcctggcctt
     4561 cctgctgggc ttcctgctga acgtgctcta caccggcatc atggagctgg tgcggctggt
     4621 gcgcgggctg aacgcctccg ctgacacacg gctggtgaag cggatctccg agcgcatgca
     4681 ggacgcccgc gacctcatgg cccatggcct gccgcgggag gcgaaggaaa tcctggagag
     4741 cattctcgaa cagcgcaagg agcacatccc cgcccgtctg ctcatgggcg aggccctcat
     4801 gaagaccggc agcgccgacg aggcgctgaa gctgttcaag gccctctgcg acgaggagcc
     4861 cgatctggtc gaggccgcct accagctggc cgaggccctg gtggccgtcc ggaaccccga
     4921 tgcctcggtc acggtactga ccaagctggc tgccagccac cccaagaagg cgctccgtgc
     4981 ctggcggcgc ctgcgggccc tccacatgga cgcccagcgc tgggacgagg ccatggaggc
     5041 ccacaagaaa ctgcaaaccc acttcgccgc ggacctcacc cagggcgaga aggcccaggg
     5101 cgccgccctg gcctaccagg tgggcctggc caaggtggaa gaagaccact tcaaggatgc
     5161 cgcccaggtc ttccagcagg tcatcaagga cgagcccgag ttcgtgcccg cctacctcag
     5221 cctgggccgc tgcatgatcc
//
LOCUS       DASUDT010000407         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1984927, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000407 DASUDT010000000
VERSION     DASUDT010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1984927"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..869)
                     /locus_tag="VFV26_08340"
     CDS             complement(<1..869)
                     /locus_tag="VFV26_08340"
                     /inference="COORDINATES: protein motif:HMM:NF012912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HEX4846213.1"
                     /translation="MSLVRTNLAILGLQWGDEGKGKVVDLLSPKFRQVVRFQGGNNAG
                     HTVVVDGQSIALHQVPSGALHPGCFLVVGNGVVLNLEVFQQELDRLQARGFDLSGRLM
                     LSEKAHIILPHHIALDLWREGGANKIGTTGRGIGPAYEMKAGRMGVRLGDLHHPETLA
                     DRIRPGYEEVRLRLGAGADLPSLEAVVEGLLRTAEPFLRFIGDTQGHLVEAWERGDRI
                     LFEGAQATLLDIDHGTYPFVTSSNCSLGGLFTGTGLPPKALDKILGIAKAYTTRVGAG
                     PFPAEMHDATGERL"
     gene            1040..>2435
                     /locus_tag="VFV26_08345"
     CDS             1040..>2435
                     /locus_tag="VFV26_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEX4846214.1"
                     /translation="MFEKFTEKARRVMFFARYEASQFGAESIQSGHLLLGLLRESEKT
                     STQLLERMGVQVSALRERLVASLTPKDKKITPSSTSIDIPMEEEVKRILQHATAESAK
                     LNHKHVGAEHLLLGMLKEEGCLAGRLLKESGADLIAAKEILLESSKEEKIAKKKKEHP
                     LLSEFARNLSEMAERGIFDNLIGREQEVERIVQILSRRRKNNPILLGEAGVGKTAIVE
                     GLAQKIHEGLVPPSLADKRIYALDLSLVVAGTKYRGQFEERLKSIIAEASKDPSVVLF
                     IDEIHSLIGTGAAEGSLDAANILKPALSRGEIQCIGATTHKEYAKYIDKDRSLVRRFQ
                     PVTVNPPDEAESLRIIEGIRSRYELFHRVRYTPKTMLASVYLSNRYITDRFLPDKAID
                     LLDEAGARVKLRVGPGSPGAEGHSHEEELHRVINEMNEAVLSRDFEKAVLLRQKELQL
                     RDELQKDRGELTDED"
BASE COUNT          434 a          802 c          860 g          339 t
ORIGIN      
        1 aggcgctcgc cggtggcgtc gtgcatttcg gcggggaagg ggccggcgcc cacgcgggtg
       61 gtgtaggcct tggcgatgcc gaggatcttg tccagggcct tggggggcag gccggtgccg
      121 gtgaagaggc cgcccaggct gcagttgctg gaggtgacga aggggtaggt gccgtggtcg
      181 atgtccagca gggtggcctg ggcgccttcg aagaggatgc ggtcgccgcg ctcccaggcc
      241 tcgacgaggt ggccctgggt gtcgccgatg aagcgcagga agggctcggc ggtgcgcagc
      301 aggccttcga cgacggcttc caggctgggc aggtcggccc ccgcgcccag gcgcaggcgg
      361 acctcctcgt agccgggccg gatgcggtcc gccagggtct cggggtggtg caggtcgccc
      421 aggcgcacgc ccatgcgccc ggccttcatc tcgtaggcgg ggccgatgcc gcggcccgtg
      481 gtgccgatct tgttggcgcc gccctcgcgc cagaggtcca gggcgatgtg gtggggcagg
      541 atgatgtggg ccttctcgga cagcatgagg cggccggaca ggtcgaagcc gcgggcctgg
      601 aggcggtcca gctcctgctg gaagacctcg aggttcagca ccacgccgtt gcccaccacg
      661 agaaagcagc ccgggtggag ggcgccgctg ggcacctggt gcagggcgat gctctggcca
      721 tcgaccacca cggtgtggcc ggcgttgttg cccccctgga agcgcaccac ctggcggaac
      781 ttggggctga ggaggtccac gaccttgccc ttgccctcgt ccccccattg gaggcccagg
      841 atcgccagat tggtcctaac caggctcatg tcgccctccc agccctccag tctaccgttt
      901 tggcagggtt ctgtcctggc cggaggcgcg gtactgcccc agccggacca ggacaagggg
      961 ggaggaaggc gctacgctgg taggccgccc cggaaccatc ccggctctgg ggccacccca
     1021 gtacccggaa gggtgtcccg tgttcgaaaa attcaccgaa aaagcccgtc gtgtgatgtt
     1081 cttcgcccgc tacgaggcga gccagttcgg tgcggaaagc atccagagcg gccacctcct
     1141 gctggggctt ctccgggagt cggaaaagac cagcacccag ctgctcgagc gcatgggggt
     1201 gcaggtgagc gccctgcggg agcgcctggt ggcgtccctg acgcccaagg acaagaagat
     1261 cacccccagc agcaccagca tcgacatccc catggaggag gaggtcaagc gcatcctcca
     1321 gcacgccacc gccgagagcg ccaagctcaa ccacaagcat gtgggggccg agcacctgct
     1381 gctgggcatg ctcaaggagg agggctgcct ggcgggccgc ctgctgaagg aatccggcgc
     1441 ggacctgatc gccgccaagg agatcctgct ggagagcagc aaggaagaga agatcgccaa
     1501 gaagaagaag gagcacccgc tcctttcgga gttcgcccgc aacctgtcgg aaatggccga
     1561 gcgcggcatc ttcgacaacc tcatcgggcg ggagcaggag gtcgagcgca tcgtccagat
     1621 cctcagccgc cgccggaaga acaacccgat cctgctgggc gaggcgggcg tgggcaagac
     1681 ggccatcgtg gagggcctgg cccagaagat ccacgagggc ctggtccccc ccagcctggc
     1741 ggacaagcgg atctacgccc tggacctcag cctggtggtg gcgggcacca agtaccgcgg
     1801 ccagttcgag gagcgcctga agtccatcat cgccgaggcc agcaaggacc ccagcgtggt
     1861 gctcttcatc gacgagatcc acagcctcat cgggaccggc gcggcggaag gcagcctgga
     1921 cgccgccaac atcctgaaac cggccctgag ccggggcgag atccagtgca tcggcgccac
     1981 cacgcacaag gaatacgcca agtacatcga caaggaccgc agcctggtgc ggcgcttcca
     2041 gcccgtgacc gtgaaccccc cggacgaggc ggagagcctg cgcatcatcg agggcatccg
     2101 cagccgctac gagctgttcc accgggtgcg ctacaccccc aagaccatgc tggcttcggt
     2161 gtacctgtcc aaccgctaca tcacggaccg cttcctgccc gacaaggcca tcgacctgct
     2221 ggacgaggcc ggcgcccggg tgaagctgcg cgtgggtccc gggagccccg gggccgaagg
     2281 ccactcccac gaggaggagc tgcatcgcgt catcaacgag atgaacgagg ccgtgctcag
     2341 ccgggatttc gagaaggccg tcctgctgcg ccagaaggaa ctgcagctgc gcgacgagct
     2401 ccagaaggac cgcggcgagc tcacggacga ggact
//
LOCUS       DASUDT010000408         4175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_637762, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000408 DASUDT010000000
VERSION     DASUDT010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4175
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637762"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2229)
                     /locus_tag="VFV26_08350"
     CDS             complement(<1..2229)
                     /locus_tag="VFV26_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX4846215.1"
                     /translation="MKAGLPALLLAAPLAMAQTTGALRVEVLDRDGKPRPGALVPLES
                     LDRGERRILKADHQGIASAAGLVPGVYRLQGQLLRVKADERTHIRLRLEEAQATVAVE
                     ASPLRGESSSVSAQTAFGAEELARLPFSPRRYVDHSTLAPGVTPSGKPEPVVLGSMLD
                     ANAYLVDGMATGLSSTGRFGMNLSAEILESQTLTTGGHKAEVGFASGGVYSMVTKSGG
                     NEFRGALYLSRIFRGLNAKPDDGKATTPEERPTDAGEHGFSLGGPLVKDRLFFFGAFN
                     RQLMSLDFENVQPPGTVPHRRSQEEDRSYRFLKLTWLPGVDHRFEFSYFGDPVTQRNF
                     DTAGDSSLKDGQQPNRTRGGDSYLLKHVGAFGPQLTWENTLGLHRTAFHWFPATPGAG
                     PFRGQLDAPGGETFGAYAEDRLDRIRNLTLRSEATLFLGPHQIKAGFQGLASEYAKVF
                     QRPSFGLAYLDRAPGGAGPAAGDLAAIQAGLLATHGSTFGYSAGDSLATASPVSGQLA
                     GGGASFLYQRTLADTASYGHPLKQRIWGLFAQDDWGFAAGWTANLGLRVDRASLEAED
                     GRSLYGQTLLSPRLGLGWEPGADGRTRFFAYAGRIYSPPTPGSLAAAGATTGGPATER
                     QVWIPSLGDWRTWQATGVQGVANMAVGDLRAPRTDLWQLGAERVQVLPWIGEWTLEAT
                     FTLKAVRDLIDTYSSTYAYLPELDALAGRSATGRAIANLPGLKRDFRGFDLVARRSFE
                     GGH"
     gene            complement(2226..2840)
                     /locus_tag="VFV26_08355"
     CDS             complement(2226..2840)
                     /locus_tag="VFV26_08355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846216.1"
                     /translation="MDSEELWRAALHDFNNLMAGLQGVLDLSDPTLPFDSRNLGRLGT
                     ILEDGKSLVSMARALALGRLPEGGLVTWPEWEGGLRERLDPLASLFGCPIDLADAGAA
                     EASWPAPLLQDWAAVFTRQLLPWATPGPLRLEAEALPEAWILRWITDAALPPALRSDP
                     APDVPRNLPSLWLRAMAAEMGIEVESLPGCLQARLSRLPKARRS"
     gene            2926..3837
                     /locus_tag="VFV26_08360"
     CDS             2926..3837
                     /locus_tag="VFV26_08360"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846217.1"
                     /translation="MQQTIKRLGELLVESGLITPAQLQSAITHQKIARGRLGSNLVAL
                     GYITEEVLMDFLSHQAGVPQMDVRSLDVPTEVLKLVPYRLADQFMVLPVSIREPKTLV
                     LAMSDPSDLNAVDSARFASGLHIQPVVASHSALRKTITDLYRRMEGATPAAPLTVDVG
                     ASLGQDDALPVTFSLDPLPLPSPAPTAAAATAAAEVAANGSRPDPFFGSPADAAQPVH
                     IDPFGLFGAVPQAAPPPPPNPNPDLVLSRTLGANARPLESYQTRTLVLGLIRLLQRRG
                     VIGQDELQRMLTNLIESGEIKDDDKVG"
     gene            complement(3834..>4175)
                     /locus_tag="VFV26_08365"
     CDS             complement(3834..>4175)
                     /locus_tag="VFV26_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291381.1"
                     /note="back-translocating Elongation Factor EF4; binds to
                     the ribosome on the universally-conserved alpha-sarcin
                     loop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEX4846218.1"
                     /translation="DVLLAGDIVDALSMIVHRDQAYARGKNLVERLFRTIPRQLFEVP
                     IQAAIGSKIIARTNVKARRKDVLAKCYGGDISRKKKLLNKQKEGKKRMKSIGNVEIPQ
                     EAFLAILKVDS"
BASE COUNT          617 a         1482 c         1448 g          628 t
ORIGIN      
        1 gtggccgccc tcgaagctgc gccgggccac caggtcgaag ccccggaaat cccgcttcag
       61 gcccggcagg ttggcgatgg ccctccctgt ggcagagcgg cccgccaggg cgtccagctc
      121 cggcaggtag gcataggtgg agctgtaggt atcgatgaga tcccgcaccg ccttcagggt
      181 gaaggtcgcc tccagggtcc attccccgat ccagggcagc acctggacgc gctcggcccc
      241 cagctgccag aggtccgtgc gcggggccct gaggtcgccc accgccatgt tggccacccc
      301 ctggaccccg gtggcctgcc aggtccgcca atcgccgagc gaagggatcc agacctgcct
      361 ctcggtggcg gggccgccgg tggtggcgcc cgcggcggcg aggctgccgg gtgtgggggg
      421 gctgtagatg cgcccggcat aggcgaagaa ccgggtccgt ccgtccgccc cgggctccca
      481 gcccaggccc aggcgcgggc tcaggagggt ctgcccgtag aggctccgcc catcctcggc
      541 ttcgaggctg gcgcgatcca cgcggaggcc caggttggcg gtccatcctg cggcgaagcc
      601 ccagtcgtcc tgcgcgaaga ggccccagat ccgctgtttg aggggatgcc cgtaggacgc
      661 ggtgtcggcc agggtgcgct ggtagaggaa gctcgcccct ccccccgcga gctgaccgga
      721 cacggggctg gcggtggcga ggctgtcccc ggcggagtag ccgaaggtgc tgccgtgggt
      781 cgccagcaga cccgcctgga tggccgccag gtcccccgcg gcgggcccgg ccccccccgg
      841 ggcgcggtcc aggtaggcca ggccgaagga gggccgctgg aagaccttgg cgtattcgga
      901 ggccagcccc tggaatccgg ccttgatctg gtgcggcccc aggaaaaggg tggcctcgct
      961 gcgcagggtc aggttccgga tgcggtccag gcgatcctcc gcgtaggccc cgaaggtctc
     1021 cccgcccggc gcgtccagct ggccccggaa gggcccggcc ccgggggtcg ccggaaacca
     1081 gtggaaggcc gtgcggtgca ggcccagggt gttctcccag gtcagctgcg gcccgaaggc
     1141 gcccacgtgc ttgagcaggt agctgtcgcc gccgcgggtg cggttgggct gctgaccgtc
     1201 cttgaggctg ctgtcaccgg cggtgtcgaa attccgctgg gtgacgggat ccccgaagta
     1261 gctgaactcg aagcgatggt ccaccccggg cagccaggtg agcttgagga accggtagct
     1321 gcggtcctcc tcctggctgc gccggtgggg gaccgtgccc gggggctgca cgttctcgaa
     1381 gtccaggctc atgagctggc ggttgaaggc gccgaagaag aagaggcggt ccttcacgag
     1441 gggcccgccc aggctgaagc catgttcgcc ggcatccgtg gggcgctctt cgggcgtggt
     1501 ggccttcccg tcatcgggtt tcgcgttaag gccgcggaag atgcggctga ggtacagggc
     1561 cccgcggaac tcgttgccgc cgctcttggt caccatgctg tagacgccgc cggaggcgaa
     1621 tcccacctcg gccttgtggc ccccggtggt gagggtctgg ctctccagga tctccgccga
     1681 gaggttcatg ccgaagcgtc ccgtggagct gagccccgtg gccatgccgt ccaccaggta
     1741 ggcgttggca tcaagcatgg agcccagcac cacgggctcc ggcttgcccg agggggtcac
     1801 gcccggggcg agggtgctgt ggtccacgta gcggcggggc gagaagggca gccgcgccag
     1861 ctcctcggcg ccgaaggcgg tctgcgcgct gacggagctg ctttcccccc gcagcggcga
     1921 agcctccacc gccacggtgg cctgggcctc ctccagccgc aggcggatgt gcgtccgctc
     1981 gtcggccttc acgcgcagga gctggccctg gaggcggtag acgcccggga ccaggcccgc
     2041 ggccgaggcg atgccctggt ggtcggcctt caggatgcgc cgctcgcccc ggtccaggga
     2101 ctcgagcggc accagagccc cgggccgtgg cttgccgtca cgatccagca cctccacccg
     2161 cagggcgccg gtggtttgcg ccatggccag gggcgccgcc agcagaaggg ccggtaggcc
     2221 agccttcatg accggcgggc cttcggcagc cgggaaaggc gggcctggag acagccgggg
     2281 agggattcga cctcgatccc catctccgcg gccatggccc gcagccagag cgaagggagg
     2341 ttccggggca catccggcgc ggggtccgac cgcagggccg ggggaagggc cgcgtcggtg
     2401 atccagcgca ggatccaggc ctcgggcagg gcctcggcct cgaggcggag gggcccgggc
     2461 gtggcccagg ggaggagctg ccgggtgaag acggcggccc aatcctgcaa gaggggggcg
     2521 ggccaggagg cttccgccgc ccctgcatcc gccaggtcga tggggcatcc gaacaggctg
     2581 gccaggggat ccaggcgctc ccgcaatccg ccttcccact ccggccaggt gaccagcccg
     2641 ccctcgggga ggcgccccag agccaaggcc cgcgccatgg acaccaggga tttgccatct
     2701 tcgagaatcg tccccagccg gccgaggttg cgcgaatcga aggggagggt cggatcgctg
     2761 aggtccagca ccccctggag ccccgccatc agattattga aatcatgcag ggccgcccgc
     2821 cagagctcct cggaatccat acatcctccg gccatacaaa agccttgaat aaacctacct
     2881 tggagacgac cctctgtgca gcatcggaag acccggggat cccacatgca gcaaacgatc
     2941 aagcgcctgg gcgaactcct cgtggaatcc ggcctcatca cgccggccca gctccagagc
     3001 gccatcacgc atcagaagat cgcccggggc cgcctgggaa gcaacctggt ggccctgggt
     3061 tatatcaccg aggaagtcct catggacttt ctcagccacc aggccggcgt gcctcagatg
     3121 gacgtccgga gtctggacgt gcccaccgag gtgttgaagc tggtgcccta ccgcctggcc
     3181 gaccagttca tggtgctccc cgtgtccatc cgggagccca agacactggt gctggccatg
     3241 tcggatccct cggacctgaa cgccgtcgac agcgcccgct tcgcctcggg cctgcacatc
     3301 cagcccgtgg tggcctccca cagcgccctc cgcaagacca tcaccgatct gtaccgccgc
     3361 atggaaggcg ccacccccgc cgccccgctg acggtggatg tgggcgccag cctcggacag
     3421 gacgatgccc tgcctgtcac gttcagcctg gatcccctgc ccctgccctc ccccgcgccg
     3481 acggcagctg cagccaccgc tgccgcggaa gtcgcggcca acggatcccg gcccgatccc
     3541 tttttcggct ccccggccga tgcggcccag cccgtccaca tcgacccctt cgggctcttc
     3601 ggagcggtgc ctcaggccgc cccgccaccc ccgcccaatc ccaatcccga tctcgtgctc
     3661 agccggaccc tcggcgccaa tgcccgtccc ctggagagct accagacccg caccctggtg
     3721 ctgggcctca tccgcctgct ccagcgccgt ggcgtcatcg gccaggatga gcttcagcgc
     3781 atgctcacca acctcatcga gtccggcgag atcaaggacg acgacaaggt cggctagctg
     3841 tcgaccttga ggatcgccag gaacgcctct tgcgggatct ccacgttgcc gatggacttc
     3901 atccgctttt tgccttcctt ctgcttgttg aggagcttct tcttgcggct gatgtcgccg
     3961 ccatagcact tggcgagcac gtccttgcgg cgggccttca cgttggtgcg ggcgatgatc
     4021 ttgctgccga tggcggcctg gatcggcacc tcgaagagct ggcgcgggat cgtcctgaac
     4081 aggcgctcca ccaggttctt gccgcgggcg tacgcctggt cgcggtgcac gatcatcgac
     4141 agcgcgtcga cgatgtcccc cgccagcagc acgtc
//
LOCUS       DASUDT010000409         2991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_239899, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000409 DASUDT010000000
VERSION     DASUDT010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239899"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VFV26_08370"
     CDS             complement(<1..350)
                     /locus_tag="VFV26_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEX4846219.1"
                     /translation="MSLTRRLMLPLCGTLAFALVAGDAPKSAAPGAKATSKVKTAKAV
                     APVALPTPVKVAAVEGITEYRLANGLRVLLFPDASKPTITTNITYLVGSRHENYGETG
                     MAHLLEHMVFKGTPR"
     gene            complement(523..1131)
                     /locus_tag="VFV26_08375"
     CDS             complement(523..1131)
                     /locus_tag="VFV26_08375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEX4846220.1"
                     /translation="MTLPRIQGHPVPALFPASGAVSVMLFGEAPGPRGADQSGIPFWG
                     DGAGITVYRALAATGRAEVPEAAWEDWDGARFKALGLAPRLIGTALSNAYPACPTKDG
                     DHFHAPSNRDLLAPANLARLAGELARAAAGSAGPLRVIAFGKRAEWVLGRLPEAPPFE
                     LHALPHPSAQGLLQGAPNQGKGLKLADLRAAWQRRLQVILEP"
     gene            complement(1128..1718)
                     /locus_tag="VFV26_08380"
     CDS             complement(1128..1718)
                     /locus_tag="VFV26_08380"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX4846221.1"
                     /translation="MPLLEASRSILVVIDFQGKLVQMVHRPALALEATRRLMRLADLF
                     AVPVVLTEQYPKGIGPTEESIRATYDALATPKFFLEKTAFGCCGDAGFEALLQQARPG
                     LAPARRQVVIAGMETHVCVMQTVLELLGSGHEVHLCWDAVSGRGEEYRQHALDRMAAA
                     GTTITNHESVAFEWARDKNHPQFKALSALMKEGQPG"
     gene            1841..>2991
                     /locus_tag="VFV26_08385"
     CDS             1841..>2991
                     /locus_tag="VFV26_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846222.1"
                     /translation="MTLRSASLTPLALVMTAALIQPLSAVDLQDTRLVASPAMSARQV
                     AFLYAGDLWTCAPDGGAAKRLTTRGGCFGTPRFSPDGAWIAYSAGLEGNGDVWVIPSA
                     GGEPRRLTWHPGADVVQDWTPDGKAVLFTSGRSVHTTRYTQLFTVPLAGGMPAKLPIP
                     NAARATYSPDGSHLVYNPLSDAFRQWKNYRGGTASRLWIYRVKDHEVVQIPQPAERCN
                     DIDPLWIGGKVYFVSDRAGEFNLFSYDVATKAVVQLTQHKDFPIQAASHGGGRIVYEQ
                     AGWLHRFDPATGQSARLKVAVAADLPESRSRWASGARWARNLGLSPSGSRVAVEFRGE
                     ILSVPAEKGDARNLTNTPGTHERNPVWSPDGKTVAYLSDAGGEYALKVQA"
BASE COUNT          424 a         1022 c         1105 g          440 t
ORIGIN      
        1 cggggggtgc ccttgaagac catgtgctcc agcaggtggg ccatgcccgt ctcgccgtag
       61 ttctcgtggc ggctgcccac caggtaggtg atgttggtcg tgatggtggg cttgctggcg
      121 tccgggaaga gcagcacgcg caggccgttg gccagccggt actcggtgat gccctccacc
      181 gcggccacct tgaccggggt gggcagggcc accggggcaa cggccttggc agtcttgacc
      241 ttggaggtgg ccttggcccc gggagccgcg gacttggggg cgtctcccgc caccagcgcg
      301 aaggccaggg tcccgcatag gggcagcatg agtcgacggg tgagggacat gtgacctcca
      361 ggttgtgaaa gatgccttga gaaggcctca gcttacgaga ggtgaacgtg tcggggctgt
      421 taaaaattgt taaggggcgg agatggcctg acgaaatccc ctgcatcgcc gtggcggacg
      481 aggcgttggt ggccccgacc ccatcgccca ggatccggct gttcagggct ccagaatgac
      541 ctggaggcgc ctctgccagg cggctctgag gtccgcgagc ttcaggccct tgccctggtt
      601 cggcgccccc tgcagcaacc cctgggcgct ggggtggggc agggcgtgca gctcgaaggg
      661 cggggcctcg ggcaggcggc ccagcaccca ctccgcccgc ttgccgaagg cgatgacgcg
      721 caggggccct gccgatcccg ccgcggcccg ggccagttcc cccgccagcc gggccaggtt
      781 ggcgggagcc agcaggtcgc ggttggaggg ggcgtggaaa tggtcgccgt ccttggtggg
      841 gcaggccgga taggcgttgc tgagggccgt gccgatgagc cgcggtgcca ggcccagggc
      901 cttgaagcgg gcgccgtccc agtcctccca ggccgcctcg ggcacctcgg cccggcccgt
      961 ggcggccagg gcgcggtaga cggtgatgcc cgcgccgtcc ccccagaagg ggatccccga
     1021 ctggtcggcc ccgcgggggc ccggggcctc gccgaagagc atcacggaaa cggctccgga
     1081 tgccgggaac agggcgggga cggggtggcc ttggatgcgg ggcagcgtca tccgggctgg
     1141 ccttccttca tgagcgccga cagggccttg aactggggat ggttcttgtc gcgggcccac
     1201 tcgaaggcca cggactcgtg gttggtgatc gtggtgccgg cggcggccat gcggtcgagg
     1261 gcgtgctgcc ggtattcctc gccccggccg ctgacggcgt cccagcagag gtgcacctcg
     1321 tggcccgagc cgagcagctc cagcacggtc tgcatgacgc agacatgggt ctccatgccg
     1381 gcgatgacga cctgccgccg ggcgggggcc aggcccggcc gggcctgctg gaggagcgcc
     1441 tcgaagcccg catcgccgca gcagccgaag gcggtcttct ccaggaagaa cttgggcgtg
     1501 gccagggcgt cgtaggtggc gcggatgctc tcctccgtgg ggccgatgcc cttggggtac
     1561 tgctcggtga gcaccacggg cacagcgaag aggtccgcga ggcgcatcag gcggcgcgtg
     1621 gcctccaggg ccagggccgg gcggtgcacc atctggacga gcttgccctg gaagtcgatg
     1681 accacgagga tgctgcggga ggcttcgagg aggggcatgg ggactccaga cggggaatcc
     1741 tagcctaccg gcctcccgga aatcttgacc ccggccagcc cccgggcgca tggtggaggg
     1801 gtttccccgg catacctcgt cttcttatgg aaggactccc gtgacccttc gatccgcctc
     1861 cctgacccct ctggccctgg tgatgaccgc ggccctcatc cagccgctgt ccgccgtgga
     1921 cctccaggac acccggctgg tggccagccc ggccatgagc gcccggcagg tggccttcct
     1981 ctacgcgggc gatctgtgga cctgcgcgcc ggatggcggg gcggcgaagc gcctgaccac
     2041 ccgcgggggc tgtttcggca cgccccgctt cagcccggat ggcgcctgga tcgcctactc
     2101 ggcgggcctg gaggggaacg gggacgtctg ggtgatcccc tccgcgggcg gcgagccccg
     2161 gcgcctcacc tggcatcccg gcgccgacgt ggtgcaggac tggacgccgg acggcaaggc
     2221 cgtgctgttc acctcggggc gctcggtcca caccacgcgc tacacccagc tcttcaccgt
     2281 gcccctggcg gggggcatgc ccgcgaagct gcccatcccc aatgccgccc gggccaccta
     2341 ttcgccggac ggcagccacc tcgtctacaa ccccctgtcc gacgccttcc gccagtggaa
     2401 gaactaccgc ggcggcacgg cctcgcggct gtggatctac cgggtgaagg accacgaggt
     2461 ggtgcagatc ccccagcccg cggagcgctg caatgacatc gaccccctgt ggatcggcgg
     2521 gaaggtctac ttcgtctccg accgggccgg ggagttcaac ctcttcagct atgacgtggc
     2581 cacgaaggcg gtggtccagc tgacgcagca caaggacttc cccatccagg cggccagcca
     2641 cggcgggggc cgcatcgtct acgagcaggc gggctggctg caccgcttcg atcccgccac
     2701 gggccagagc gcgcgcctga aggtggccgt ggcggcggat ctgcccgaat cccgcagccg
     2761 ctgggcctcc ggcgcccgct gggcgcggaa cctgggcctg tcgccttcgg gcagccgggt
     2821 ggccgtcgag ttccggggcg agatcctgag cgtgcccgcg gagaagggcg atgcccgcaa
     2881 cctcacgaac acgccgggaa cccacgagcg caaccccgtc tggtcgccgg acggcaagac
     2941 cgtcgcctac ctgtccgatg cgggcggcga gtacgcgctg aaggtccagg c
//
LOCUS       DASUDT010000410         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1609482, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000410 DASUDT010000000
VERSION     DASUDT010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1609482"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VFV26_08390"
     CDS             <1..638
                     /locus_tag="VFV26_08390"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4846223.1"
                     /translation="RLNVIPLDLPPLRDRPGDLNLLAAHFAERYARENDRTVPELVPS
                     FFAALARHPWAGNIRELENVIQRCVVLSQGRRLSQQDLHWLLPADAFEGLPEDPPENT
                     FLDAWTPPPSAAAMPRREAVAAPAGAVVADPRKPLVGVPMGTPVVLPLGLSLPELERF
                     WLLSTLSALKGNRTHCAEQLDIALRTVRNKINEYKADGFAIPPSQRGRDDE"
     gene            complement(891..1850)
                     /locus_tag="VFV26_08395"
     CDS             complement(891..1850)
                     /locus_tag="VFV26_08395"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX4846224.1"
                     /translation="MVEKILGHWARLMAAPERIRRILAVVWREIARAVPPLGRAGAFT
                     VEVLGKYHKDDCLSYAAGLSFWLIVSLVPLSTLLFKLLGAILGSRATGPASLRTLQEI
                     VPYLPKELVVDAVANSQKIGGMGLSWIVLLFGSYWGISQLDTSLAHVFGLRIKKHRQT
                     RKNHLLRQVAFLVGGLLTMVILLTLLLGGALWKFLPGKPGALLPYLGPLLGLVLMTMV
                     LQHLPRLHVKFRHAFLGAGIATALWWLAKWGFGLYLSHTMTWGIMYGSLLGVVAGLTF
                     LYYSCAILLLGAEITAAFYRHETGATTVPPWLRVQAGEPAKPN"
     gene            complement(1864..2064)
                     /locus_tag="VFV26_08400"
     CDS             complement(1864..2064)
                     /locus_tag="VFV26_08400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846225.1"
                     /translation="MRFLASHVIHFLVMGLGIALVLGLLHPTTRPERTRASILKHAAG
                     LIGIGLALAWLMYLLPRNPVRF"
BASE COUNT          382 a          737 c          712 g          338 t
ORIGIN      
        1 accgcctgaa cgtcatcccc ctggacctgc cgcccctgcg cgaccggccg ggcgacctga
       61 acctgctggc cgcgcacttc gccgagcgct atgcccgcga gaacgaccgc accgtgcccg
      121 agctggtgcc cagcttcttc gccgccctgg cccgccatcc ctgggccggc aacatccgcg
      181 agctggagaa tgtcatccag cgctgcgtgg tgctgagcca gggccgccgc ctcagccagc
      241 aggatctcca ctggctgctg cccgccgacg ccttcgaggg gctgcccgag gatcccccgg
      301 aaaacacctt cctcgacgcc tggacgccac ccccttccgc cgccgcgatg ccgcgccgcg
      361 aggccgtggc cgcccccgcc ggcgccgtgg tggccgaccc ccggaagccc ctggtgggcg
      421 tccccatggg cacgcccgtg gtgctgcccc tgggcctgag cctgccggaa ctggagcgtt
      481 tctggctgct ctccaccctc agcgccctca agggcaaccg cacccactgc gccgagcagc
      541 tcgacatcgc cctgcgcacc gtgcgcaaca agatcaacga gtacaaggcc gatgggttcg
      601 ccatcccgcc gagtcagcgg gggcgggacg acgagtgata tcggcaggcg ttcattacga
      661 aaagaaagaa ttttcaccac caaggcacca aggccaccaa gaagtgcaag gacattgggt
      721 tttcttttct tggtgtcttg gtgtcttggt ggtgttcctt atcttttgaa agcaagttgg
      781 tatgaaatcc accgcgcttc ggtaaagcag atcagccacg gatgaacaca gataaacaac
      841 ggtcgttatc cgtgtttatc tgtgttcatc cgtggctcaa ccttcctgct tcaattcggt
      901 tttgcgggct ctccggcttg cacccggagc cacgggggca cggtggtggc gccggtttcg
      961 tggcggtaga aggcggcggt gatctcggcg cccagcagca ggatggcgca gctgtagtag
     1021 aggaaggtca ggccggccac gacacccagc agggagccgt acatgatgcc ccaggtcatg
     1081 gtgtggctca ggtagaggcc gaagccccac ttggccagcc accacagcgc cgtggcaatg
     1141 cccgcgccca ggaaggcgtg gcggaacttc acgtgcaggc ggggaaggtg ctgcagcacc
     1201 atggtcatca gcaccaggcc cagcaggggc cccaggtagg gcagcagcgc ccccggcttg
     1261 ccgggcagga acttccagag ggccccgccc aggagcaggg tgaggaggat caccatggtg
     1321 agcaggcccc ccaccaggaa ggccacctgg cgcagcaggt ggttcttgcg ggtctgccgg
     1381 tgcttcttga tgcgcaggcc gaagacatgg gccaggctcg tgtccagctg gctgatgccc
     1441 cagtagctgc cgaagagcag cacgatccac gacagcccca tgccgccgat cttctggctg
     1501 ttggccaccg catcgacgac cagctccttg ggcaggtagg gcacgatttc ctgaagcgtc
     1561 ctcagggagg cggggccggt ggcacggctg cccaggatgg cgcccagcag tttgaagagc
     1621 agcgtggaca ggggcaccag gctcacgatg agccagaagc tgaggcccgc ggcgtagctc
     1681 aggcagtcgt ccttgtggta cttcccgagc acctccaccg tgaaggcccc ggcccgcccc
     1741 aggggcggca ccgcccgggc gatctcgcgc cacaccacgg ccaggatccg ccggatccgc
     1801 tccggggctg ccatcaacct cgcccagtgg cccaggatct tctcgaccac ggtccctcct
     1861 ggatcagaag cggacgggat tccggggcag caggtacatc aaccaggcca gggccaggcc
     1921 gatgccgatg agccccgccg cgtgcttcag gatcgaggcc cgcgtccgct ccggccgcgt
     1981 ggtcgggtgc agcaggccca gcaccagggc aatgcccagg cccatgacca ggaagtggat
     2041 gacatggctg gcgagaaagc gcatggagcc agggtagcag gctcaaggcg cgagtctgga
     2101 gactggagtc tggagactgg actccagatt tccctactgc gtcgccggat tctcccgggc
     2161 ggggctggc
//
LOCUS       DASUDT010000411         2056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_85519, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000411 DASUDT010000000
VERSION     DASUDT010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85519"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VFV26_08405"
     CDS             <1..850
                     /locus_tag="VFV26_08405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846226.1"
                     /translation="QGVMSALAIGDTAALVEACRELNEQGADWATFWRELVLAFRDRL
                     EQEARAARGPQDLLRWARMLQLLLSRERDLRDSSLPRVVVELALITAAQLPHLAPLDA
                     LVSGAAARPSSGPPAGPPPVPFRAPQAAPAPEGPRRPTPAPSPAPAPARAQVPPAAHA
                     STPPQLRLACSEALRGVPGLRVLGTAPQMATDLSWEVPVLRFRFPANVRQTLRDLERE
                     KANPHVLAALAAVLPGLKELDVRFEDGPAQAESDRPEDRLRREPAFQELLRISGGELL
                     EIRREG"
     gene            complement(851..1072)
                     /locus_tag="VFV26_08410"
     CDS             complement(851..1072)
                     /locus_tag="VFV26_08410"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX4846227.1"
                     /translation="MITVKCFARYRALLGFSELTLPAAATLGGLLADPRFACLPKDAL
                     LAVNQSFADRATPLADGDEVALMPPVSGG"
     gene            complement(1100..>2056)
                     /locus_tag="VFV26_08415"
     CDS             complement(1100..>2056)
                     /locus_tag="VFV26_08415"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX4846228.1"
                     /translation="ATLEGDEEGGLLQGRLRADRLTYQTEVKLTDLILRSALSDSGGL
                     VGLDLDDPLDRIRLDLDLDLRSPWSFDTNLLKLEGRPDGPFQVVGTLAHPVPKGTMIF
                     QPGGRITNFFPAGDMVVNQGSLAFSESRPLDPVINLQGSVSSIPGYTVNLDIHGTLST
                     LSFVPTSTPSLRQDEIVAILINPANVANVGTAGASSGVTQGAITSGLASAGSGLISTL
                     AFAPFQEQLRRTLGLDRVNVAVRTTSLGTTETEVTLGKSVNLLGQRSAFVVSHKKSGE
                     LSITSGQVEWRFGGLILQLGASKGGSAGINPSGEIRHTWSPK"
BASE COUNT          276 a          719 c          755 g          306 t
ORIGIN      
        1 gcagggcgtc atgtccgccc tggccatcgg cgacacggcc gccctggtgg aggcctgccg
       61 ggagctgaac gaacagggcg ccgactgggc caccttctgg cgggagctgg tgctcgcctt
      121 ccgggaccgc ctggagcagg aggcccgcgc cgcccgcggt ccccaggatc tgctccgctg
      181 ggcgcgcatg ctccagctgc tgctgagccg ggagcgggac ctgcgggaca gcagcctgcc
      241 ccgcgtggtg gtggagctgg ccctgatcac cgcggcccag ctgcctcacc tggcccccct
      301 ggatgccctg gtttcgggcg ctgccgcccg gccatcctcg ggcccgcctg ccggtccgcc
      361 gccggtccct ttccgggctc cccaggccgc gccggcgcct gaggggcctc gcaggcccac
      421 gccggcccct tcgcccgccc cggctccggc ccgggcccag gtcccgcccg cggcgcatgc
      481 ctccacgccg ccccagctcc gtctggcctg cagcgaggcc ctccggggag tgccgggcct
      541 ccgcgtcctg ggcaccgcgc cccagatggc cacggacctc agctgggagg ttccggtcct
      601 gcgtttccgc ttccccgcca atgtgcggca gaccctccgg gacctggagc gcgaaaaggc
      661 caacccccat gtgctggcgg ccctggcggc tgtgctgccg ggcctgaagg aactggatgt
      721 ccgcttcgag gacggccccg cccaggccga atccgaccgg cccgaggatc gcctgcggcg
      781 cgagcccgcc ttccaggagc tgctgcgcat cagcggaggt gagctgctgg agatccggcg
      841 cgagggctga tcagccgccg gataccggcg gcatgagggc cacctcgtcg ccgtcagcca
      901 gcggggtggc gcgatcggcg aagctctggt tcacggccag cagcgcatcc ttgggcaggc
      961 atgcgaaacg gggatccgcc agcaggccgc cgagggtggc cgccgcgggc agggtcagtt
     1021 cgctgaagcc cagcagggcg cggtagcggg cgaagcactt caccgtgatc atgcacatct
     1081 ccactggcca gcctacagcc tacttggggc tccaggtatg gcggatctcc ccagaaggat
     1141 tgataccggc gctgccgccc ttgctggcgc ccagctggag gatgaggccg ccgaagcgcc
     1201 actccacctg gccggaggtg atgctcagtt cgccgctctt cttgtgggac acgacgaagg
     1261 cgctgcgctg gcccaggagg ttcacgctct tgcccagggt gacctcggtt tccgtggtgc
     1321 ccaggctggt ggtgcgcacg gccacgttca cgcggtccag accgagggtg cggcgcagct
     1381 gctcctggaa gggcgcgaag gccagggtgg agatgaggcc cgaccccgcg ctggccaggc
     1441 ccgaggtgat ggcgccctgg gtgacgccgg aggaggcccc ggcggtgccc acgttcgcca
     1501 cgttggcggg gttgatgagg atggccacga tctcgtcctg gcgcaggctg ggggtggatg
     1561 tcgggacgaa cgacagggtg ctgagggtgc cgtggatgtc caggttcacg gtgtagccgg
     1621 gaatggaact cacgctgccc tggaggttga tgacgggatc caggggccgg gattccgaaa
     1681 aggccaggga accctggttg accaccatgt cgcccgccgg gaagaagttc gtgatccgcc
     1741 ccccgggctg gaagatcatg gtgcccttgg gcacggggtg ggccagggtg cccactacct
     1801 ggaagggccc gtcgggccgg ccctccagct tcagcaggtt ggtatcgaag ctccaggggc
     1861 tgcggagatc caggtccagg tccaggcgga tgcggtccag gggatcgtcc aggtccagcc
     1921 ccaccaggcc gccgctgtcg ctgagggcgc tgcggaggat gagatccgtc agcttcactt
     1981 cggtctgata ggtcaggcgg tcggcccgga ggcggccctg cagcaggccg ccctcctcgt
     2041 ctccttccag ggtggc
//
LOCUS       DASUDT010000412         4381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1300860, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000412 DASUDT010000000
VERSION     DASUDT010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4381
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1300860"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VFV26_08420"
     CDS             <1..520
                     /locus_tag="VFV26_08420"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEX4846229.1"
                     /translation="QPSYGKTLNPDHRFVTKTGKIELYSERLKEAGYDALPVYAPPVQ
                     PPNDRFRLILGRVGYFTHANQSNNVWLNEFMKENDLWINPKPAERLGIRNGSTVTVTS
                     SVGSVKLKVRVTEEIRPDCVFMLHGFGKKSKMQSLVYNVGASDAVILETAWDKVSGNA
                     AFHETFVKVANA"
     gene            530..1081
                     /locus_tag="VFV26_08425"
     CDS             530..1081
                     /locus_tag="VFV26_08425"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX4846230.1"
                     /translation="MAMKKKRYALVIDSRKCINCKACAVACKAENDVPVGNFRNRINE
                     ERKGEYPKLSIDFEPEQCHHCAEPSCVRVCPTGASWQRKDGIVLVNDGECIGCRYCML
                     ACPYDARYFHEEDGVVGKCTLCSHRVDKGEIPACVATCPSKVRVFGDLEDATSRIHEL
                     LATRRYRVKEPQTGNGPQLYYLL"
     gene            1091..2071
                     /gene="nrfD"
                     /locus_tag="VFV26_08430"
     CDS             1091..2071
                     /gene="nrfD"
                     /locus_tag="VFV26_08430"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX4846231.1"
                     /translation="MHEFNWGLLIVVYLFLGGLSAGLFFAAGLANYLTVDDKPVYARI
                     ARMGAMLAPWPVAIGSGLLILDLGNWYRFYKLFTHFRWESPMSIGSYLLSIFTAITFV
                     YLFSWLTAEERAWLFGKIPASWKLVHRLNVDISSWREKIAMVGFPFSIGVGIYTGVLL
                     GAVSARPFWNTNLVAQMFLFSALSSGAAALLLAMVLNRKSPIEKHETKFLVTLDVVFI
                     SLELFIILPYLIHGQLSSLAVKQALSLILGGPYTFVFWGPFLVLGLLVPLAIEVYELA
                     PSIFKGREFHGSRNLALAAAGLVLMGGFLLRYIFVYAGQVSSFRQMGMLN"
     gene            2216..2803
                     /locus_tag="VFV26_08435"
     CDS             2216..2803
                     /locus_tag="VFV26_08435"
                     /inference="COORDINATES: protein motif:HMM:NF014651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEX4846232.1"
                     /translation="MTLALLADLAQILAEAFLEPDADLKEGLAQLLDSGPSPALAAPL
                     ARMVENALPPEDQPVEYARLFLHAKDTDIVHLFESVQARGHHMAPEILDPLKAIYDGA
                     DLGLQEDLGIPPDHLGLEFACLSYLLGQVIEGDPVERPQLVDLAQRLLREHLRPFVAA
                     VAGQLPQVQAHPYYLAASELASALLPETEKALAEF"
     gene            2851..4230
                     /locus_tag="VFV26_08440"
     CDS             2851..4230
                     /locus_tag="VFV26_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4846233.1"
                     /translation="MSVPTTILLVDDEPGIRRSLGEALKDEGYHVVKAERGEQAIDLL
                     HNPDGEGIQLVLLDVWLPGQDGLETLKQAKQIRPDLPVVMISGHASIDTALQATKLGA
                     FDFLEKPIDLDRLLLVTGNALRQSRLERENQRLQAEVEGGRFFLADSPAMRRLMADVA
                     LVAPTEGRVLLTGENGSGKEEVARFIHVQSARKDAPFVEVNCAAIPEELIESELFGHQ
                     KGAFTGAVRDQKGKFREADGGTLFLDEVGDMSLKTQAKVLRALQEGRVEPVGGGGAVG
                     VDVRVIAATNKDLAGEITRGRFREDLYFRLAVVPLRIPPLRERPEDILPLAEAFISRI
                     GRQYGRPPKRLGPEAKDTLLRHDWPGNVSELKNLMERAVILGRGAEIGPRDLGALAAR
                     HLAEQDPFSFPEFPSLKEAKDWFETQYLQREMKLQSGNMTRVAERVGMDRSNLYKRLK
                     ALGIEPRES"
BASE COUNT          755 a         1584 c         1339 g          703 t
ORIGIN      
        1 ccagcccagc tacggcaaga ccctgaaccc cgaccaccgc ttcgtcacca agaccggcaa
       61 gatcgagctg tactccgagc ggctcaagga ggcgggctac gatgccctgc ccgtctacgc
      121 gcccccggtg cagccgccca acgaccggtt ccgcctgatc ctgggccgcg tgggctactt
      181 cacccacgcc aatcagtcca acaacgtctg gctgaacgag ttcatgaagg agaacgacct
      241 ctggatcaat ccgaagcccg cggaacggct cggcatccgg aacggctcca ccgtgaccgt
      301 caccagcagc gtgggcagcg tgaagctcaa ggtccgcgtc accgaggaga tccggccgga
      361 ctgcgtgttc atgctccacg gcttcggcaa gaagtcgaag atgcagagcc tggtctacaa
      421 cgtgggcgcc agcgacgcgg tgatcctcga gacggcctgg gacaaggtgt ccggcaacgc
      481 cgccttccac gaaaccttcg tcaaagtcgc gaacgcgtag gagcgagcca tggccatgaa
      541 gaagaagcgc tacgccctcg tcatcgactc caggaaatgc atcaactgca aagcctgcgc
      601 cgtcgcctgc aaggccgaga acgacgttcc cgtggggaac ttccggaacc gcatcaacga
      661 agagcggaag ggcgagtacc cgaagctcag catcgacttc gaaccggagc agtgccacca
      721 ctgcgcggaa ccctcctgcg tccgcgtgtg ccccaccggc gcctcctggc agcgcaagga
      781 tggcatcgtg ctcgtcaacg acggcgaatg catcggctgc cgctactgca tgctcgcctg
      841 cccctatgac gcccgctact tccacgagga ggacggcgtg gtgggcaagt gcaccctctg
      901 cagccaccgg gtggacaagg gggagattcc ggcctgcgtg gccacctgcc cctccaaggt
      961 gcgcgtcttc ggcgacctgg aggatgccac cagccgcatc cacgaactcc tcgccacgcg
     1021 gcgctaccgc gtgaaggaac cccagacggg caacggcccc caactctatt acctgctcta
     1081 ggagacggac atgcacgagt tcaactgggg cctcctcatc gtcgtctacc tcttcctggg
     1141 tgggctttcc gccgggctct tcttcgccgc gggcctggcc aactacctga cggtggacga
     1201 caagcccgtc tacgcccgca tcgcccgcat gggcgccatg ctggccccct ggcccgtggc
     1261 catcggatcg ggcctgctca tcctcgacct gggcaactgg taccgcttct acaagctgtt
     1321 cacgcacttc cgctgggaaa gccccatgtc catcgggtcg tacctgctca gcatcttcac
     1381 ggccatcacc ttcgtctacc tcttctcctg gctcacggca gaggagcggg cctggctctt
     1441 cggcaagatt cccgcgtcct ggaagctggt ccaccgcctg aacgtggaca tctcctcctg
     1501 gcgcgagaag atcgccatgg tgggcttccc cttctccatc ggcgtgggca tctacaccgg
     1561 cgtgctgctg ggcgccgtgt ccgcccgccc cttctggaac accaacctgg tggcccagat
     1621 gttcctgttc tcggccctct ccagcggcgc cgcagccctg ctgctggcca tggtcctgaa
     1681 ccggaagagc cccatcgaga agcacgagac caagttcctc gtcaccctgg acgtggtgtt
     1741 catctcgctt gagctgttca tcatcctgcc ctacctcatc cacgggcagc tctcctccct
     1801 ggcggtgaag caggccctga gcctgatcct cggcggcccc tacaccttcg tcttctgggg
     1861 tcccttcctg gtgctgggcc tcctggtccc cctcgccatc gaggtctacg agctggcccc
     1921 cagcatcttc aagggccggg agttccacgg cagccgcaac ctggccctcg ccgccgccgg
     1981 cctcgtcctg atgggcggct tcctgctgcg ctacatcttc gtctacgctg gccaggtgag
     2041 cagcttccgc cagatgggga tgctgaactg atcctggttc ttcaggaaca gatcaacgga
     2101 tcaccaccaa gacaccaaga caccaagaaa gggccattgc agttcttggt gccttggtgt
     2161 cttggtggta aatctttctg cccgctgatt ctgcgtgctt caggaggaat cccacatgac
     2221 gctcgcgctc ctggccgacc tcgcccagat cctcgccgag gccttcctcg agcccgatgc
     2281 tgacctgaag gaagggctgg cgcagctgct ggacagcggc cccagccccg ccctcgccgc
     2341 ccccctggcg cggatggtgg agaacgccct cccgcccgag gaccagcccg tggaatacgc
     2401 ccggctcttc ctccacgcca aggacacgga catcgtccac ttgttcgaat ccgtccaggc
     2461 ccgggggcac cacatggccc cggagatcct cgatcccctc aaggccatct acgacggggc
     2521 cgacctcggc ctccaggagg acctgggcat cccgcccgac cacctgggcc tggagttcgc
     2581 ctgcctgagc tacctcctgg ggcaggtcat cgaaggcgat ccggtcgagc gcccgcagct
     2641 cgtggacctg gcccagcggc tgctccggga gcacctgcgg cccttcgtgg ccgccgtggc
     2701 cggccagctg ccccaggtgc aggcccaccc gtactacctg gccgcctcgg agctggcctc
     2761 ggccctgttg ccggaaaccg agaaggcgct ggcggaattc taggcaaccc cctgctggac
     2821 aaaggcttgc tccgcgccca gcatggagcc atgagcgtcc ccacgaccat cctcctggtg
     2881 gatgacgagc cgggcatccg gcggtccctg ggcgaagccc tcaaggacga gggctaccac
     2941 gtcgtgaagg ccgaacgggg cgagcaggcc attgacctgc tccacaaccc tgacggcgaa
     3001 ggcatccagc tcgtgctgct cgatgtgtgg ctgccgggcc aggacggtct ggagaccctg
     3061 aaacaggcca agcagatccg cccggacctg cccgtggtga tgatctcggg ccacgccagc
     3121 atcgacacgg ccctccaggc caccaagctg ggcgccttcg acttcctgga aaagcccatc
     3181 gacctggacc gcctgctcct ggtgaccggc aacgccctgc gccagtcccg gctggagcgc
     3241 gagaaccagc gcctccaggc ggaggtcgaa ggcggccgct tcttcctggc ggacagcccg
     3301 gccatgcggc ggctcatggc cgacgtggcc ctcgtggcgc ccacggaggg ccgggtgctg
     3361 ctcacgggtg agaacggcag cggcaaggag gaggtggcgc gcttcatcca cgtgcagagc
     3421 gcccgcaagg atgcgccctt cgtggaagtg aactgcgcgg ccatccccga ggagctcatc
     3481 gaaagcgagc tgttcggcca ccagaagggc gccttcaccg gcgccgtgcg cgaccagaag
     3541 ggcaagttcc gcgaggcgga cggcggcacc ctcttcctgg acgaagtggg cgacatgtcg
     3601 ctgaagaccc aggccaaggt gctgcgcgcc ctccaggagg gccgcgtgga acccgtgggc
     3661 gggggcggcg ccgtgggcgt ggacgtccgt gtcatcgccg ccaccaacaa ggatctggcc
     3721 ggcgagatca ccaggggccg cttccgcgag gacctctact tccgcctcgc cgtggtgccc
     3781 ctccgcatcc cgcccctgcg cgagcggccc gaggacatcc tgcccctggc cgaggccttc
     3841 atcagccgca tcggccgcca gtacgggcgc ccgcccaagc gcctggggcc ggaggccaag
     3901 gacaccctgc tgcgccacga ctggcccggc aacgtgagtg agctgaagaa cctcatggag
     3961 cgcgccgtca tcctgggccg cggcgccgag atcggccccc gcgacctggg cgccctggcc
     4021 gcccgccacc tcgccgagca ggaccccttc tccttccccg aattccccag cctcaaggag
     4081 gccaaggact ggttcgagac ccagtacctg cagcgggaga tgaagctcca gagcggcaac
     4141 atgacccgcg tggccgagcg cgtgggcatg gaccgctcca acctctacaa gcgcctcaag
     4201 gccctgggca tcgagccccg ggagagctga aatgaacctt caccacggag acacggaggg
     4261 cacggagaag agagcacgga gaaatgacaa ggattctgct tttctccgtg cccatctcag
     4321 tgttttcctc cgtgggctcc gtgcctccgt ggtggatctt tcatgctgcc tcccccacgg
     4381 a
//
LOCUS       DASUDT010000413         2476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_660386, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000413 DASUDT010000000
VERSION     DASUDT010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660386"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            430..1179
                     /locus_tag="VFV26_08445"
     CDS             430..1179
                     /locus_tag="VFV26_08445"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4846234.1"
                     /translation="MTRHSVVIVTKNEEANLAACLESVAWADERIVVDSFSTDGTVAI
                     AQARTPHVFIRAWKGYADQKNFGIDQAAGEWVLILDADERVSPELAREIQALAEQPRK
                     EKVFRIPFKNHLGGFWLAHGGLYPDYHPRLFRKGSARYGAREIHETLDYEGPAGRLKH
                     PILHFTYADIATYLHKVNHYTSLEAEHLHLQGFVVRWWHFLSPLSRFFKFYVRKRGFQ
                     DGFHGFASALLLSIYPVLVSLKVLELRHRGR"
     gene            complement(1229..2371)
                     /locus_tag="VFV26_08450"
     CDS             complement(1229..2371)
                     /locus_tag="VFV26_08450"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX4846235.1"
                     /translation="MTPQQALASLGSRDLVLVGDNLWQPSRGTWTVGGEQRLLQALAQ
                     LMTTRGFRIWGVQPHPSWASWEGDGLTWIGVPPGRRSGWRRWWWNRTLHTHLNPSARV
                     VYSYAELASPACVPGCVVWQHGVAWDGRSPERRWRSLRQNLGVLSQAAAFACVDTNFP
                     NVLAAGSRDLSDIHGKCVYIPNFPPVALDRCPEEPPGRPRILYLRRFGPGRGTDLMAE
                     AALRLWGQGLDFELEMVGYSDDGSQERLLQRLLAAQIEDGRAQVHALPFERVGEAYAR
                     AHLSVVPSRKGEGTSLSCLEAMAHGLPVVASWVGGLPDLVQDGLNGSLVAPTVEGLVE
                     GIGPMLADPGRRQALRQGAWESSRRFGREAWDARTLDLFNRIGWVP"
BASE COUNT          421 a          859 c          822 g          374 t
ORIGIN      
        1 attctccggg gggtcgaaga agagggttcc cgcccggagg cccagccact tgaagccggg
       61 atcgccctcc ccggcggcga ggcccggggc gagacccatg ccaaggccca cggccaggat
      121 cgacctcagg gccgtccgcc cgattctcat cccgacctcc aggtagacaa acatctaacg
      181 atatcccaat gtgtgtgatc aggccaccac ggggtggcct tcctgatctg gcgcctccca
      241 cggccggtgg acggtggggc ctaccgttga tccaacggca gtccggcccg ggccaaggaa
      301 ccattcattc tctgggcctg cgctcccgtg aagggtggac tgccgtccag tcgcgcggga
      361 taaaatcgcc gaagcctgcc gaagcctgcc gaagcccgca gggaaaccac cccactccgc
      421 cgagcgctca tgacccgcca ttccgtcgtc atcgtgacca agaacgagga ggccaacctg
      481 gccgcctgcc tggaaagcgt ggcctgggct gacgagcgga tcgtcgtgga ttcgttcagc
      541 actgacggca ccgtggcgat cgcgcaggcc cgcacccccc atgtcttcat ccgggcctgg
      601 aagggctacg cggaccagaa gaacttcggg atcgaccagg ccgcgggtga gtgggtgctg
      661 atcctggacg cggatgagag ggtctcgccg gagctggccc gagagatcca ggccctggcg
      721 gagcagcccc ggaaggagaa ggtcttccgg atccccttca aaaaccacct gggcggtttc
      781 tggctcgcgc acggcggact ctatcccgac taccaccccc gcctgttccg gaagggctca
      841 gcccgctacg gggcccggga gatccacgag accctcgact acgagggccc cgcaggccgc
      901 ctgaagcacc ccatcctcca cttcacctac gccgatatcg cgacctacct ccacaaggtg
      961 aaccactaca ccagcctcga ggcggaacac ctccacctcc agggctttgt ggtgcgctgg
     1021 tggcacttcc tgtcgcccct ctcccggttc ttcaagttct atgtccgtaa gcggggcttc
     1081 caggacgggt tccacggctt cgccagcgcc cttctactgt ccatctaccc ggtgctggtg
     1141 agcctgaagg tgctcgaact gcgccatcgg ggacgctagg tgtaactgcc aaggaggttg
     1201 ttcatccggg ttgcctctga accaagattc atggcaccca tccgatgcgg ttgaacaggt
     1261 cgagggtccg ggcatcccag gcttcgcggc cgaagcggcg ggaactctcc caggcgccct
     1321 ggcgcagggc ctgccggcgc cctggatcgg ccaacatggg gccaatcccc tccaccaggc
     1381 cttccaccgt gggggccacc agggagccgt tgaggccgtc ctgcaccaga tcgggaagcc
     1441 cgcccaccca gctggccacc acgggcagcc cgtgagccat ggcctccagg caactgagac
     1501 tggttccctc gcccttccgg gaaggaacca cagaaaggtg ggcccgggca taggcctccc
     1561 cgacgcgctc gaacggcagt gcatggacct gggcccttcc gtcctcgatc tgggcggcga
     1621 gaagccgctg gaggaggcgt tcctggctgc catcgtcgct gtagccgacc atctccagtt
     1681 cgaaatccag tccctggccc cacaggcgga gggcggcttc ggccatgaga tccgtgcccc
     1741 tgcccggacc gaagcggcga aggtagagga tgcggggccg tccaggaggt tcctcggggc
     1801 agcggtccag ggccacgggg gggaaattcg ggatgtagac acacttcccg tggatgtccg
     1861 acaggtcgcg gctgcctgct gcgaggacgt tcgggaagtt ggtgtccacg caggcgaagg
     1921 cggcggcctg gctgagcacg cccagattct gccgcaggct gcgccagcgg cgctcggggc
     1981 tgcggccgtc ccaggcgacg ccgtgctgcc agaccacgca ccccggcacg caggcggggg
     2041 aagccagttc cgcgtagctg tagaccacgc gggccgatgg attcagatgg gtgtggaggg
     2101 tgcgattcca ccaccagcgg cgccagccgc tccgccgccc cggaggaacc ccgatccagg
     2161 tgaggccgtc cccttcccag gaggcccagg agggatgggg ttgcacaccc cagatccgga
     2221 acccgcgagt tgtcatgagc tgggccaggg cctgaaggag gcgctgttcc ccgccgacgg
     2281 tccaggtgcc acggctgggc tgccagaggt tgtccccgac cagcaccaga tcccgcgatc
     2341 ccagggaggc cagggcctgt tggggggtca tgcgcacccc acgaaccggg cgatcacctc
     2401 ggcgatccgg cggccggtct gcccgtcgcc gtaggggaat cggggcacgg ccatggcctc
     2461 gtaggcggcc gggtcg
//
LOCUS       DASUDT010000414         2689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_593706, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000414 DASUDT010000000
VERSION     DASUDT010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593706"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1255)
                     /locus_tag="VFV26_08455"
     CDS             complement(77..1255)
                     /locus_tag="VFV26_08455"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX4846236.1"
                     /translation="MIRSRHTFLLGLAASLALPLAAQTPAPPTEEATIQRFRAHAAPR
                     PVAPRAPLSAEERNTVRRFKAAKPSVVYVSAIAPGLDLRTHDITKIPQGQGTGFVWDE
                     WGHIVTNHHIITVDEQGKRLGDVDEVEITLADGKTYKGRVIGYSFAYDIAVLQAFAPL
                     PAMRPIPIGSSGNLQVGQSVMAIGNPFGLDHSLSKGVISALGREIGTDYSTRITDAIQ
                     TDAAVNPGNSGGPLLDSSGRLIGMNTAIVGQTGGSVGVGFAIPVDTLNHVVPRLIARG
                     FLVPVRMGFDTLNAAVALKTFGIQRGLVVSQVDPDTPAGRAGIRPLKLDGQGGILALG
                     DILLAYQGRLIESNGQLMAMLELEPPADEVVFDVLREGQVVKVTLQLKAAAKAPPASI
                     "
     gene            1396..>2689
                     /locus_tag="VFV26_08460"
     CDS             1396..>2689
                     /locus_tag="VFV26_08460"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4846237.1"
                     /translation="MVAGCLLAVLVAAGTTWWRQHRAEHPVHVLLVEGAGEPGDGLTP
                     DLRRAFQDLMEYDLKALGPVATTRLTSTPRREHLTRLPAATLVLELQPRREGNDLGLV
                     RRLARVEDLRTRGEAAWIREVLPSRGPREMLAALWNTLPIPFPDRRHAVALTPQEPAF
                     FWTLLEAMSRHRRNDQLKGALEQARQVTEAEPGCALAWMARGDLLYRLLLIDPLGHPQ
                     GQAEAERHFRRALELVPEHPQTSFLLAQLKTDAGDQREALEVLRRSLKAHPQDATLCV
                     GVAYAARCAGLLDLASRALARGDGLVFTELQAHATENTYLYLGDGGRFEAGLVETPGD
                     PRNVVVRFYRGYLALARGDRASARYWFAQAQAIPGGFAQFDQLAAVYEALAEGRMALA
                     RERLERLDAARVGLRVPDGEFTFKMAEACALMGDRSLAM"
BASE COUNT          384 a          876 c          997 g          432 t
ORIGIN      
        1 ccggacccgg cgcctcccgt gagcccatgc tctgtgtctc cgtggtggat cctttagggt
       61 tgaacgcgaa actgtatcag atgctggcgg gcggggcctt cgccgcggcc ttcagctgca
      121 gcgtgacctt gaccacttgg ccctcccgca ggacatcgaa gaccacctcg tcggcggggg
      181 gctccagctc cagcatggcc atgagctggc cgttgctttc gatcaggcgc ccctggtagg
      241 cgaggaggat gtcaccgagg gccaggatcc caccctgccc atccagcttc aggggccgga
      301 tgccggcacg gcccgccggg gtatccggat ccacctggga gacgacgagg ccccgctgga
      361 tgccgaaggt cttcagggcc acggccgcgt tcagtgtgtc gaagcccatg cgcaccggga
      421 ccaggaagcc ccgggcgatg aggcggggca ccacatggtt gagggtgtcc acggggatgg
      481 cgaagcccac gcccacggaa ccgccggtct ggccgacgat ggccgtgttc atgccgatga
      541 gccggccgct gctgtccagg aggggcccgc cggaattccc agggttcacg gcggcgtccg
      601 tctggatggc atcggtgatg cgcgtgctgt agtccgtgcc gatctcccgg cccagggcgg
      661 agatgacccc cttgctgagg gagtggtcca gcccgaaggg gttgccgatg gccatcacgg
      721 actggcccac ctggaggttc ccgctcgatc cgatggggat ggggcgcatg gcggggaggg
      781 gggcgaaggc ctggagcacg gcgatgtcgt aggcgaagct gtagccgatc acccgcccct
      841 tgtaggtctt gccgtcggcg agggtgatct ccacctcgtc cacatccccg aggcgcttgc
      901 cctgttcgtc cacggtgatg atgtgatggt tggtgacgat gtggccccat tcatcccata
      961 cgaagcccgt gccctggccc tgggggatct tggtgatgtc gtgggtgcgg agatccagcc
     1021 caggggcgat ggcggagaca tagaccacac tgggcttggc ggccttgaac cgccggacgg
     1081 tgttccgctc ctcggcgctg agcggcgccc gcggagccac ggggcgcggg gccgcatggg
     1141 cccggaacct ctggatggtg gcttcctcgg tgggcggggc gggggtctgc gcggcgaggg
     1201 gcagggccag ggaggcggcg agccccagga ggaaggtgtg acggctgcgg atcatggcgg
     1261 ctcccccgag attatgcagt ggaagggtat tggcgatggc ggcggcgagt tggggtacct
     1321 tggattccag gtcttcatcc gggaaccccc atgggcgtcc attttcgccg cactgcccga
     1381 atcgccctcc catgggtggt cgcaggctgc ctgctggcgg tcctggtggc ggcagggacc
     1441 acctggtggc gccaacaccg ggccgaacac ccggtgcatg tgctgctggt ggagggcgcg
     1501 ggcgagcccg gggatggcct gacgccggat ctgcggcggg ccttccagga tctgatggaa
     1561 tacgacctga aggccctggg cccggtggcg accacgcgcc tgacttcaac cccccggcgg
     1621 gaacacctga cccggcttcc cgccgccacc ctggtgctgg aactccagcc gcggcgggaa
     1681 gggaatgacc ttgggctggt gcggcgcctg gcccgcgtgg aggatctgcg cacgcggggc
     1741 gaggcggcct ggatccggga agtccttccg tcccgggggc cccgtgagat gctggcggcc
     1801 ctctggaaca ccctgcccat cccctttcct gacaggaggc acgcggtcgc cctgacaccc
     1861 caggaaccgg ctttcttttg gaccctgctg gaagccatga gccgccatcg ccggaacgac
     1921 cagctgaagg gggcgctgga gcaggcccgg caggtgaccg aagcggaacc cggctgcgcc
     1981 ctggcctgga tggcgcgggg ggatctgctc taccgcctgc tgctcatcga tcccctgggt
     2041 catccccaag gccaggccga ggccgagcgc cacttccgcc gcgccctgga gctggtgccc
     2101 gagcatcccc agacaagttt cctgctggcc cagttgaaga cggatgcggg ggaccagcgg
     2161 gaagcgctgg aggtcctccg ccggagcctg aaggcccatc cccaggacgc cacgctgtgt
     2221 gtcggcgtcg cctatgcggc ccgatgcgcc gggctgctgg acttggccag ccgggcgctg
     2281 gcgcggggcg acggcctggt gttcacggaa ctccaggccc acgccaccga gaacacctat
     2341 ctctacctgg gagatggggg gcgcttcgag gcggggctgg tggaaacccc cggtgacccg
     2401 cgcaatgtgg tggtgaggtt ctaccgcggc tacctggctc tggcgcgggg tgaccgggcc
     2461 tccgcccgct actggtttgc ccaggcccag gcgatccccg ggggattcgc gcagttcgac
     2521 cagctggccg cggtgtacga ggccctggcc gaagggcgga tggccctcgc cagagagcgg
     2581 ctggagcggc tggatgccgc ccgcgtgggg cttcgcgtcc ccgatggcga attcaccttc
     2641 aagatggctg aggcctgcgc gctgatgggg gaccgttccc tggcgatgg
//
LOCUS       DASUDT010000415         5567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1212440, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000415 DASUDT010000000
VERSION     DASUDT010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212440"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VFV26_08465"
     CDS             complement(<1..349)
                     /locus_tag="VFV26_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX4846238.1"
                     /translation="MRQLLRGLAWAAGGFMAGCVLLVLTFRFVPVAVSGLMVQRRMES
                     WFSGKPYVSRHQWVPLEDISPSLGVAVIAAEDQTFAEHFGFDWQAIEKAVQHNEKSRR
                     KRGASTVSQQTAKN"
     gene            484..858
                     /locus_tag="VFV26_08470"
     CDS             484..858
                     /locus_tag="VFV26_08470"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4846239.1"
                     /translation="MSIEHEQRRYPRLSTTDRGYLVRFRAKGVEILNGRLANLSAGGC
                     GLEIQMADARDLEVGDVLEAFTLDHPDLPLVPLSAVILRMLGKVAGKTTGYVLVGVEF
                     EGLTPFVEGLIAGHVAAQLARR"
     gene            902..2842
                     /locus_tag="VFV26_08475"
     CDS             902..2842
                     /locus_tag="VFV26_08475"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX4846240.1"
                     /translation="MLSMKQTSFELFLDRLDPGSRAGQLAFFRATLEEGPAAVQELAG
                     RVQRVSCPAGLRQLTLEFCHYHPWPEWLPVVERLLRHEKELPLFETGVRALGRMRMPA
                     AVAALRALSQSRATPGFREAVDRALREADPAEAFHHHFARLLQGSAQPADANEGAHQL
                     LKLLTPESLEPLKSAVAHADPLVFRHALRLVGQIGTPEAAAFLLGHLKAIHQDALEDR
                     ELRLLLVALRALPRPELLERIHQALASRWGTERPEVLAELASGQADRVQAAADGLRAQ
                     GLGLRDGFLLDTLLAAMEEKAAPLTRHLDQANEAAPHRARRIEFGLDTAAQSLAAMAQ
                     QGLIEPEALLPALAEPLRLNTGRAGVASALARLVPPSAQPLLDLLLDEADGTIRAAAL
                     EILGERKDPDLRPALLKARRDAIEDLAQRALWHLGQLPDPEGTARAFLAEADPEEVKV
                     GLRFAAMHRLEALVPDLLALAASESREAVQVAALEALGAIASPRAVDPLLALLHTGQA
                     PRMRLALAEALRDLGDPIGALALSVKAEELKAPLLHAVAVEALVRAHDGPDRPLSLGG
                     SAALLKAVQGGWSDRHPWPLRRRIADALLALHSDDPAVWAELSALVQATLGEKRPPGS
                     VPAEDLAHLQTCGRVLAQKAQA"
     gene            2891..4039
                     /locus_tag="VFV26_08480"
     CDS             2891..4039
                     /locus_tag="VFV26_08480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846241.1"
                     /translation="MSENLTGPELVALVQRVFQPRPGEKALAILVDLPDAKVPDDANW
                     AARRAIAAAWAAELKAHRAELGMDTHLVVYPNVHTNNGDLPERAWLHGGGPLPSADSL
                     DPAASISFADLYASHPILIALTKFSATAPLKLAAKTQPIRAATMPGFRADMIPALRLD
                     YTEVNRRVNLLKDLLDRAEGAAFRFATPDGPCDLHVDLRHRTGHASGGLLPTPGVAGN
                     LPSGEAYIVPYEGERDGDPSRTSGVMPVQFGTEVVRYRIEGNKALEVISEGPKSRDEA
                     ALLAKEPAYGNLAELGLGVLAAFGVKPIGEILLDEKLGLHLAFGRSDHFGGQVGPKDF
                     SGPEAVIHIDRVYVPETQPDVKIVAVDLQMGDGTTMPLMRDGEYAVGF"
     gene            4242..5144
                     /locus_tag="VFV26_08485"
     CDS             4242..5144
                     /locus_tag="VFV26_08485"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4846242.1"
                     /translation="MGNYLPGEPSAHSSTPFRIPLTDGDQLTGRHYPGETDVLTLVFH
                     GLGGDDQAHYVRRTVTLARKLGHHVWTVNHRGCGEGRGLAKRPYHSGSGDDLGAAFAA
                     ARERHPDLRQLAVAYSLSANALLLNLGGGLPGPAAQPDAAIAVNPPVDLGACSSAIHA
                     GLSRLYELRFIKRCRKAIRQRVEDGLIPDIYLTRPLMSLREFDDAYTTKAGGFRDADD
                     YYARCSARHHLSKITVPTVILMAKDDPFIPWQHAAEANPSPAVHLHIEPRGGHMGYLS
                     RDLPGHRWLPYAVEHYAKELLTPA"
     gene            complement(5131..>5567)
                     /locus_tag="VFV26_08490"
     CDS             complement(5131..>5567)
                     /locus_tag="VFV26_08490"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4846243.1"
                     /translation="NVPGLVGLGRAAERAKERLPEMDRVRGLRDAFEARLRAEVPEIR
                     IHGAGAERLPNTCLVGFAGIEGEALQLKLAERGVCVSTGSACSTGMREPSHVLRAMQV
                     PQAYGQGTVRFSLGLGTTAEQMARVADLLPGLVAELRALTRG"
BASE COUNT          790 a         2201 c         1798 g          778 t
ORIGIN      
        1 cgttcttggc cgtctgctgg gatacggtgg aggctccgcg cttgcggcgg ctcttctcgt
       61 tgtgctgcac cgccttctcg atggcctgcc agtcgaagcc gaagtgctcc gcgaaggtct
      121 ggtcctccgc cgcgatcacc gccaccccca ggctggggga gatgtcctcc aacggcaccc
      181 actggtgccg ggagacatag ggcttgccgc tgaaccagga ttccatccgc cgctgcacca
      241 tcaaccccga caccgccacc ggaacgaagc ggaaggtcag caccagcagg acgcacccgg
      301 ccatgaaacc gccggcggcc caggccagcc cccggagcag ctgcctcatc catccaccct
      361 tcttcttcgc catcgcgccc agccccgtca aaacaccagt ctggcagccc cggggccgat
      421 gcagaggcat cagcctcggt gtcccggcgc caggccttca cttcagctgg agaagcacct
      481 ttcatgtcca ttgagcacga acagcggagg tacccccgcc tgagcaccac ggaccggggc
      541 tacctggtcc gcttccgggc caagggcgtg gagatcctga acggccgcct ggcgaacctc
      601 agcgcaggcg gctgcgggct ggagatccag atggccgatg cccgggacct ggaggtgggg
      661 gatgtgctcg aggccttcac cctcgaccac cccgacctgc ccctggtgcc cctttcggcg
      721 gtgatcctgc ggatgctcgg caaggtggcc ggaaaaacca ccgggtacgt cctggtgggc
      781 gtcgagttcg aaggcctcac gcccttcgtg gaaggcctca tcgccggcca tgtggcggcc
      841 cagctggcgc ggaggtgatc atggccccgc ggcaggatgg ccctggccgg aaggatccgc
      901 catgctctcc atgaagcaga cctccttcga actgttcctg gaccggctcg accccggcag
      961 ccgggccggc cagctggcct tcttccgggc cactctggaa gagggtcccg cggccgtgca
     1021 ggagctggcg ggccgcgtgc agcgggtctc ctgccccgcg ggcctgcggc agctcacgct
     1081 ggagttctgc cactaccatc cctggcccga atggctgccc gtggtcgagc gcctgctccg
     1141 ccatgaaaag gagcttcccc tgttcgagac cggcgtgcgc gccctgggac ggatgcggat
     1201 gcctgccgcc gtggcggccc tgcgcgccct gtcccagagc cgcgccacgc ccggcttccg
     1261 ggaagccgtg gaccgggccc tgcgggaagc ggatcccgcc gaggccttcc accaccactt
     1321 cgcccgcctc ctccagggga gcgcccagcc cgcggacgcc aatgagggcg cccatcagct
     1381 tctgaaactc ctcacgccgg agagtctgga gccgctcaaa agcgccgtgg cccatgccga
     1441 ccccctggtc ttccgccacg ccctccgcct ggtgggccag atcggcacgc cggaggcggc
     1501 ggcctttctc ctcggccacc tgaaggccat ccatcaggac gccctggaag accgcgagct
     1561 ccggctcctc ctcgtggccc tccgcgccct gccccggccc gagctgctgg agcggatcca
     1621 ccaggccctg gccagccggt ggggcacgga gcggccggaa gtcctggcgg agctggcctc
     1681 gggccaggcg gaccgcgtcc aggccgccgc cgacggcctg cgtgcccagg gtctgggcct
     1741 gcgggacggc ttcctgctgg acaccctcct cgccgccatg gaggagaagg ccgcgccctt
     1801 gactcgccat ctggaccagg ccaacgaggc ggccccgcac cgggcccggc gcatcgagtt
     1861 cggcctggac acggcggccc agagcctcgc ggccatggcc cagcagggtc tcatcgaacc
     1921 ggaggccctg ctgcccgccc tggccgagcc cctgcgcctg aacacgggcc gcgccggagt
     1981 cgccagcgcc ctcgcccgcc tggtgccgcc atcggcccag ccgctgctcg acctcctgct
     2041 ggacgaggcg gacggcacca tccgcgccgc cgccctggag atcctgggcg agcggaagga
     2101 cccggacctc cggcccgccc tgctcaaggc ccgccgggac gccatcgagg acctggccca
     2161 gcgtgccctc tggcacctgg ggcagctgcc cgatcccgaa ggcacggccc gcgccttcct
     2221 cgcggaagcc gaccccgagg aggtcaaggt gggcctccgc ttcgccgcca tgcaccgcct
     2281 ggaggccctg gtgcccgatc tgctggccct cgcggccagc gaatcccggg aggccgtcca
     2341 ggtggccgcc ctggaggccc tcggcgccat cgcctccccc cgggccgtgg atccgctcct
     2401 ggccctgctc cacaccggcc aggcgccccg gatgcggctg gccctggccg aagccctgcg
     2461 cgacctgggc gatcccatcg gcgccctggc cctgagcgtc aaggccgagg agctgaaggc
     2521 ccccctgctg cacgctgtgg cggtggaagc cctggtgcgg gcccacgacg gccccgaccg
     2581 ccccctgtcc ctgggcggat ccgcggccct cctcaaggcc gtgcagggcg gctggtccga
     2641 ccgccacccc tggcccctgc gccgccgcat cgccgatgcc ctgctggccc ttcattccga
     2701 cgatcctgct gtctgggcgg aactctccgc cctggtccag gccacccttg gcgagaagcg
     2761 ccccccgggc agcgtccccg ccgaggacct ggcgcacctc cagacctgcg gccgggtgct
     2821 ggcccagaag gcccaggcct gatctcgaca ggaccgcccc gcccagggca tcctccctgc
     2881 ggaggctggc atgagcgaga acctgacggg acctgaactg gtggcgctgg tgcagcgggt
     2941 attccagccc cggcccggcg agaaggccct ggccatcctg gtggatctgc cggatgccaa
     3001 ggtgccggac gacgccaact gggccgcccg ccgcgccatc gccgccgcct gggccgcgga
     3061 gctgaaggcc caccgggcgg agctgggcat ggacacgcac ctggtggtct accccaatgt
     3121 ccacaccaac aacggcgacc tgccggagcg ggcctggctc catgggggcg gccccctgcc
     3181 ttccgcggat tcgctggatc ccgcggcttc catcagcttc gcggacctct atgccagcca
     3241 ccccatcctc atcgccctca ccaagttctc cgccacggcg cccctgaagc tggccgcgaa
     3301 gacccagccc atccgcgccg ccaccatgcc gggcttccgg gccgacatga ttcccgccct
     3361 gcgcctggac tacacggagg tgaaccgccg cgtgaacctg ctgaaggatc tgctggaccg
     3421 ggccgagggc gcggccttcc gcttcgccac cccggacggc ccctgcgacc tgcacgtgga
     3481 cctgcgccac cgcacgggcc acgcctccgg cggcctgctg cccacgcccg gcgtggcggg
     3541 caacctgccc tccggcgagg cctacatcgt gccctacgag ggcgagcgcg acggcgaccc
     3601 cagccgcacc agcggcgtga tgcccgtgca gttcggcacc gaggtggtgc gctaccgcat
     3661 cgagggcaac aaggcgctgg aagtcatcag cgagggcccc aagtcccgcg atgaagccgc
     3721 cctgctggcg aaggagcccg cctacggcaa cctggccgag ctgggcctgg gcgtgctggc
     3781 ggccttcggc gtgaagccca tcggcgagat cctcctggac gagaagctgg gcctgcacct
     3841 cgccttcggc cgcagcgacc acttcggcgg ccaggtgggg ccgaaagatt tcagcggccc
     3901 cgaagccgtc atccacatcg accgcgtcta cgtccccgag acccagccgg acgtgaagat
     3961 cgtggccgtg gaccttcaga tgggggatgg caccaccatg ccgctcatgc gggacgggga
     4021 gtacgccgtg gggttctgag cattcgcggt ggcctgctca tctggctgag acagaccgaa
     4081 agccgggttg tcctttcacg gcgtcctggc ggtgaagatc tcccataggc ttggagccca
     4141 ggccatctgc gtcacactta tcgggtatgc gctccctggc cccgccgccc ctcccttgcc
     4201 gtgcgccctg gtgggcggcc tccggccacc tccagacgat catgggcaat tacctgcccg
     4261 gggaaccctc ggcccattca tccacgccct tccgcattcc gctgacggac ggcgaccagc
     4321 tcacgggacg ccactatccg ggtgaaacgg atgtgctgac gctggtcttc cacggcctgg
     4381 gcggggacga tcaggcccac tatgtgcgcc gcaccgtcac cctggcccgc aagctgggcc
     4441 atcacgtctg gaccgtgaac caccggggct gcggcgaagg ccgggggctg gcgaagcggc
     4501 cctaccacag cggttccggc gacgacctgg gcgccgcctt cgccgcggcc cgcgagcggc
     4561 acccggacct gcgccagctg gcggtggcct attccctgtc cgccaacgcc ctgctgctga
     4621 acctcggcgg cggcctgcct ggaccggcgg cccagccgga cgcggccatc gccgtgaatc
     4681 cgcccgtgga cctgggcgcc tgctcctccg ccatccacgc cggcctcagc cgcctctacg
     4741 aactgcgctt catcaagcgc tgccgcaagg ccatccgcca gcgggtggag gacggcctca
     4801 tccccgacat ctacctcacc cggcccctca tgagcctgcg ggaattcgac gatgcctaca
     4861 ccaccaaggc cggcggcttc cgcgatgcgg acgactacta cgcgcgctgc tccgcgcggc
     4921 accacctgtc gaagatcacg gttcccaccg tcatcctcat ggccaaggac gatcccttca
     4981 tcccctggca gcacgccgcg gaagccaatc catccccggc ggtgcacctc cacatcgagc
     5041 cccgcggcgg ccacatgggc tacctcagcc gcgacctgcc cggccaccgc tggctgccct
     5101 acgcggtgga gcactacgcc aaggagcttc tcacccccgc gtgagggccc gcagctccgc
     5161 caccagcccc ggcagcaggt ccgccacccg ggccatctgc tcggcggtgg tgcccagccc
     5221 caggctgaag cgcacggtgc cctggccgta ggcctgaggc acctgcatgg cccggagcac
     5281 atggctgggc tcccgcatgc ccgtgctgca ggcgctgccg gtggacacgc acacgccccg
     5341 ttccgccagc ttcagctgga gggcctcgcc ctcgatcccc gcgaacccca ccaggcaggt
     5401 gttcggcagg cgttccgccc ccgccccatg gatacggatc tcgggcactt ccgcccggag
     5461 gcgggcctcg aaggcatccc gcagcccccg cacccggtcc atctccggca gccgctcctt
     5521 cgcccgttcc gccgccctgc ccagccccac gagcccgggg acgttct
//
LOCUS       DASUDT010000416         4054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_682104, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000416 DASUDT010000000
VERSION     DASUDT010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4054
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682104"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VFV26_08495"
     CDS             complement(<1..621)
                     /locus_tag="VFV26_08495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4846244.1"
                     /translation="MSQDQPTFDHPVPPRSSRLRTLGLVALGLVAGAGGALLLRRPAA
                     PAAAQPEAKKQMYQCPMHLQIIQDHFGTCPICAMDLVPIEEIQGGESSVEGLATITID
                     PARQQLIGLRTAKVVEGAAGGEIRAVVRLVPDETRIRKINVKVEGFVEKLHADFIGKP
                     VAKGQPLFSLYSPEFVSAQREYLLALKTEKALSGGSLRQSGGDLLDS"
     gene            complement(632..2032)
                     /locus_tag="VFV26_08500"
     CDS             complement(632..2032)
                     /locus_tag="VFV26_08500"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4846245.1"
                     /translation="MRMLLRLAPALVLAAPAAAQAPLPESPVPDRSPADPVLAALLAE
                     ALGKHPDIQRADAAVKMDQERIPQAGVLPDPTLSLGLQNDGFNGLMVGKMETSFYSVA
                     FTQPLPWPGKRGLRKEAAAIGVDLSEATRSRVLLGLEADVRRGYAALLLVRGQQALLA
                     QQAIFLEQAERLARTRYEVGQGSQGDLLRAQLELTRLKQSAWALEAEERTALAGLNRL
                     RQRDPAEPIATSASLAELPEPELLAPEAIEARSPELAGARASVRQTEKLLDLAKLDRR
                     PDFAVTAGIMPRGSLDPMWQVGVSISLPIYGRHKQQRAVAEHEHHRRGQGAEVDSVRT
                     LLRQRTEERTIQIGTLRRTRDLYREGLLVQSEASFKAALAQYESGRAPFLGALEALNG
                     WVGDQGAYLQTLAQLQAQHIALREAALGTTPPITGGSLASASLAGGAAAAPTASKSSA
                     KVPGKAQDSGPAAMKM"
     gene            complement(2101..2478)
                     /locus_tag="VFV26_08505"
     CDS             complement(2101..2478)
                     /locus_tag="VFV26_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846246.1"
                     /translation="MRSILRAILAVLLLLGGGAGDWAPAGTSHESCCCGTPARVEDRC
                     PCPKPEDNRGSTRSLCAERSTTVASPAARRTLGARRIEPRPEPATWAEAAEAPGTAAS
                     LGFEHGRDPDLGRHLARLSTFRI"
     gene            2615..3682
                     /locus_tag="VFV26_08510"
     CDS             2615..3682
                     /locus_tag="VFV26_08510"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4846247.1"
                     /translation="MGTVETAEVAIIGGGIAGLSLAFHLARAGQRGIVLLEREAQPGT
                     YASGHNAAVARALTGRDEHTALAVEGRRRLAEAGLMTAGGGLLVSAERGPLDAFEAEA
                     ARFGVAVRRGEGIPLPGLKAAEHLAIPGDGVIDIAALLHACADGARAGGADLRFGCAL
                     LGLRPTEAGFDLDTDRGPLRVKALAIAAGAWAGELGAQAGSPLAFTPLRRSLVWSGAA
                     HPQQEPWAWWVDRPFYLRPESGGLLMCPCEEAAAPLPPRGRQPDTDPAVLEGLFASLR
                     ELAPDLAERPITRYWTGLRTFAPDRRFVIGWDPWNPRLFWSAGLGGHGMTSGLAVGQL
                     AADCYLRKTTAGPLDPVRFKG"
     gene            3822..>4054
                     /locus_tag="VFV26_08515"
     CDS             3822..>4054
                     /locus_tag="VFV26_08515"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX4846248.1"
                     /translation="MTTLRVALIQQATVWQDPAANLARARGFVEAAARAGARVAVFPE
                     LFTLGFTMAPEPFAEPIPGPTTEAVAALSQEFGL"
BASE COUNT          529 a         1429 c         1534 g          562 t
ORIGIN      
        1 ggagtccagc aggtcgccgc cggactgccg cagcgagccg ccgctgaggg ccttctcggt
       61 cttcagggcc agcaggtact cccgctgggc gctcacgaac tcggggctgt acaggctgaa
      121 caggggctgg cccttggcca cgggcttgcc gatgaaatcc gcgtggagct tctcgacgaa
      181 gccctccacc ttcacgttga tcttgcggat gcgagtctca tcgggcacca ggcgcaccac
      241 cgcgcggatc tcgccgccgg cggcgccctc caccaccttg gccgtgcgca gcccgatgag
      301 ctgctggcgg gcgggatcga tggtgatggt ggcgaggccc tccacgctgg actcgccgcc
      361 ctggatctcc tcgatgggca ccaggtccat ggcgcagatg gggcaggtgc cgaagtggtc
      421 ctggatgatc tggaggtgca tggggcactg gtacatctgc ttcttggctt cgggctgcgc
      481 cgccgccggg gccgcaggac ggcgcagcag cagcgcgccg ccggccccgg ccaccaggcc
      541 gagggccacg aggccgaggg tgcggaggcg ggaggaacgg ggcggaaccg gatggtcgaa
      601 ggtgggctgg tcttggctca tgggggatct cctacatctt catggcggcg gggccactgt
      661 cctgggcctt gcccggaacc ttggcggagg acttcgaagc ggtgggcgcg gcggcggccc
      721 ccccggcgag gctggccgag gccagggatc cgccggtgat ggggggcgtc gtgcccaggg
      781 ccgcttcgcg cagggcgatg tgctgggcct ggagctgggc cagggtctgc aggtaggcgc
      841 cctggtcgcc cacccagccg ttgagggcct ccagggctcc gaggaagggc gcgcggccgg
      901 attcgtactg ggccagggcg gccttgaagc tggcctcgct ctgcaccagc aggccctccc
      961 ggtagaggtc ccgggtgcgg cgcagggtgc cgatctggat ggtccgctcc tccgtgcgct
     1021 ggcgcagcag ggtgcggacg gaatccacct cggcgccctg gccgcggcgg tggtgctcat
     1081 gctcggccac ggcacgctgc tgcttgtggc ggccgtagat gggcagggag atgctcaccc
     1141 ccacctgcca catgggatcg aggctgcccc ggggcatgat cccggcggtg acggcgaaat
     1201 ccgggcggcg gtccagtttc gccaggtcca gcagcttctc cgtctgccgc acgctggcgc
     1261 gggccccggc cagctcgggg ctgcgggctt cgatggcctc gggcgccagc agctccggct
     1321 ccggcagctc cgccagcgag gcgctggtgg cgatgggctc agcgggatcg cgctggcgca
     1381 gacggttcag gccggcgagg gccgtgcgct cctcggcttc cagggcccag gccgactgct
     1441 tgaggcgcgt cagctccagc tgggcccgca gcaggtcgcc ctggctgccc tgccccactt
     1501 cgtagcgggt gcgggccagg cgctcggcct gctccaggaa gatggcctgt tgcgccagca
     1561 gcgcctgctg gccgcggacc aagagcaggg ccgcgtagcc gcggcgcaca tcggcctcca
     1621 ggcccagcag cacgcgcgag cgggtggcct cggacaggtc caccccgatg gcggcggcct
     1681 ccttccgcag gccccgcttg cccggccagg gcaggggctg ggtgaaggcc acgctgtaga
     1741 agctggtctc catcttgccg accatcaggc cgttgaagcc gtcgttctgg aggcccaggg
     1801 acagggtggg atccggcagc acgcccgcct gggggatgcg ctcctggtcc atcttcacgg
     1861 ccgcgtcagc cctctggata tcggggtgct tcccgagggc ttcagccagc agggcggcca
     1921 ggacgggatc ggcgggggag cggtccggaa cgggggattc gggaaggggg gcctgggcgg
     1981 cggccggtgc ggcgagcacc agggccgggg ccaggcgcag cagcatgcgc atgggttctc
     2041 cggaaaggga aagaggaatg gcccgccctc ggggcaggcg gaacttcgct cagtcccggc
     2101 tcagatccgg aaggtgctca gacgcgcgag gtggcggccc aggtccgggt cgcgtccatg
     2161 ctcgaagccc aacgatgcgg cggtcccggg ggcctcggcc gcctcggccc aggtggccgg
     2221 ctcgggacgg ggctcgatgc ggcgggcgcc cagggtcctg cgggccgcag gcgaggccac
     2281 ggtggtggaa cgctcggcgc agagggaacg ggtggatccc cggttgtcct cgggcttggg
     2341 gcaggggcag cggtcctcca cccgggcggg cgtgccgcag cagcaggact cgtgggaagt
     2401 ccccgcgggc gcccagtccc ccgccccgcc gcccaggagc agcagaacag ccaggatggc
     2461 gcgcaggatc gaccgcacgg agaaacctcc agatgtccca tcataggcct tccacccatg
     2521 tggcgacacg gaatccttga ccgggatcac aggggcccgc cgggcggggg gccccagagg
     2581 caggattcac gggcattggc gctaggatgg cggcatgggc acggtggaaa cggcggaggt
     2641 ggcgatcatc ggcggcggca tcgccggcct gagcctggcc ttccacctgg cccgggccgg
     2701 ccagcggggc attgtcctgc tggagcgcga ggcccagccc ggcacctacg ccagcggcca
     2761 caacgccgcc gtggcccggg ccctcacggg tcgcgacgag cacacggccc tcgccgtgga
     2821 gggacggcgg cgcctggccg aagcgggcct catgaccgcg ggcggcgggc tgctggtgag
     2881 cgcggagcgc ggccccctgg acgccttcga ggccgaggcc gcgcggttcg gcgtggcggt
     2941 ccgccgcggc gagggcatcc ccctgcccgg cctgaaggcc gcggagcacc tggccattcc
     3001 cggggatggc gtcatcgaca tcgcggccct gctgcacgcc tgcgccgacg gcgcccgcgc
     3061 cgggggcgcc gacctgcgct tcggctgcgc cctgctgggc ctgcgcccca cggaggcggg
     3121 cttcgacctg gacacggacc gcggccccct gcgggtgaag gccctcgcca tcgccgccgg
     3181 ggcctgggcc ggagagctgg gcgcccaggc cggatccccc ctcgccttca cccccctgcg
     3241 gcgctccctg gtgtggagcg gcgccgccca cccgcagcag gagccctggg cctggtgggt
     3301 ggaccggccc ttctacctgc gcccggaaag cggcggcctg ctcatgtgcc cctgcgagga
     3361 ggccgccgcg cccctgcccc cccgcgggcg ccagcccgac acggaccccg ccgtgctgga
     3421 gggcctcttc gccagcctgc gggagctggc gccggacctg gcggagcgcc ccatcacccg
     3481 ctactggacc ggcctgcgca ccttcgcccc ggaccggcgc ttcgtcatcg gctgggatcc
     3541 ctggaacccg cgcctgttct ggagcgcggg cctcggcggc cacggcatga ccagcggcct
     3601 cgccgtgggc cagctcgccg ccgactgcta cctgaggaag accaccgccg ggccgctgga
     3661 tcctgtgcgg ttcaagggtt gagcagaaaa accaaaagat caccaccaag acaccaaggc
     3721 accaagaact gcagaaaaac ggaatggagt ctttcttggt gtcttggtgt cttggtggtt
     3781 tgctttttct ttctcgagtc ctcatctcct gggatcgatc catgaccacg ctccgcgtcg
     3841 ccctcatcca gcaggccacg gtctggcagg atccggcggc gaacctcgcc cgggcccggg
     3901 gcttcgtgga agcggcggcc cgcgccgggg cccgggtggc ggtgttcccg gagctgttca
     3961 ccctgggctt caccatggcc ccggagccct tcgccgagcc gatccccggc cccaccacgg
     4021 aggcggtggc agccctctca caggagttcg ggct
//
LOCUS       DASUDT010000417         3669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1013676, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000417 DASUDT010000000
VERSION     DASUDT010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3669
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013676"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="VFV26_08520"
     CDS             <1..239
                     /locus_tag="VFV26_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846249.1"
                     /translation="GDSAGALALYGDYRKRLLATDLAAKKHNEKRVLSLNLYFMARVA
                     AKQGAPAEARSLVDLAERLHPGKRRVAQQDPVFR"
     gene            complement(236..946)
                     /locus_tag="VFV26_08525"
     CDS             complement(236..946)
                     /locus_tag="VFV26_08525"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4846250.1"
                     /translation="MMMVWALATVPVTVLGILAAMPFLGPRRAFFAVGPMFARGMAWF
                     CHVPFTLTGWERLPEAIRDGRQSVIFMSNHESQLDPPILVAALPVPAVYIAKQELKYV
                     PFIGWAGWAAGVIFIDRGDRERAIQSIHAAAQQIRGGKNVVIFPEGTRNRTGQMLPFK
                     KGGFALAMDAGVPIVPMATLGGHEVLPPGSLRIRPGRYVVAVGEPVDPAAHADRESLI
                     AAVRGRIEVLMAEVREAV"
     gene            1028..1246
                     /locus_tag="VFV26_08530"
     CDS             1028..1246
                     /locus_tag="VFV26_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846251.1"
                     /translation="MGITEQILADHAARKGPDGTTWFTAADLARLGLHDQLFTIMQTV
                     QHTLRMRGARQVVESHGCTDRWSVQDTH"
     gene            complement(1361..2077)
                     /gene="ric"
                     /locus_tag="VFV26_08535"
     CDS             complement(1361..2077)
                     /gene="ric"
                     /locus_tag="VFV26_08535"
                     /inference="COORDINATES: protein motif:HMM:TIGR03652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein"
                     /protein_id="HEX4846252.1"
                     /translation="MNVELNTKVGELVMTRPETMRYFERLGIDYCCGGHRTLEEACRV
                     ANQAPADILKGLETLEPFTAGVASPRDWAQAPLADLIQHIVATHHDYLREELPRLELL
                     LEKVLRAHGERHPEMVRVAELYRGLVADLTPHMMKEEQILFPFITQMEQGQSGSSCFG
                     TVQSPIRVMEMEHEAVGALLAELRELTGAYTVPADGCATFRALYDGFEVLEQDLHLHI
                     YLENQILHPRATAMEVSVQA"
     gene            complement(2217..>3669)
                     /locus_tag="VFV26_08540"
     CDS             complement(2217..>3669)
                     /locus_tag="VFV26_08540"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX4846253.1"
                     /translation="KVLALYEAPHETALAAAFGALLEDPVHRELATRVKAHADVLRAH
                     RGRPVSDERQLLADLERLDPQAQEALALFDLLFIWKKRRRVTRHLMELVQAIRETQKE
                     GGRVFLVASGTSYHAALVAATFFNSLSGVAVFPCNPGMFRSMYLNALQPRDLLLGITQ
                     SGETKDLVDIFTDVRGRVPALRRISLVNNENSRIPQELSEFYLPILCGPEIAVAATKS
                     FLNQVAILYVLAASFSLTERKIAANLERAKDLIAETLRTSEADVEEAAKRLYLEPSLH
                     ILGTGLIGLAREGALKIREVVLNHAEGYDAAEFKHGPNTILGKNTLFSIQDLAGLLEV
                     YEQHRDGRPFSGGIEALKAWPELVETRFSNYPLLFVCPSEERDIRITISQIHTHKIRG
                     ADILLIAEKQPELALAVAGQPMGQDRYWSKYIEVPFSGDPNLFVFAASVALQRLAFRM
                     SVLKMEYLDRLTVADHGVHPDAPKNVSKSITVD"
BASE COUNT          606 a         1155 c         1312 g          596 t
ORIGIN      
        1 aaggcgacag cgcgggggcc ctggccctgt acggggacta ccggaagcgg ctcctggcca
       61 cggacctcgc cgccaagaag cacaatgaga agcgggtgct gtccctgaac ctctacttca
      121 tggcccgcgt ggccgcaaag cagggcgccc ccgccgaggc caggagcctg gtggacctgg
      181 ccgagcgcct gcacccgggc aagcggcggg tggcgcagca ggacccggtc ttccgctaga
      241 cggcttcgcg gacctcggcc atgagtactt cgatgcggcc gcggacggcg gcgatcaggg
      301 actcccggtc cgcatgggcg gcgggatcca cgggctcgcc gacggccacc acatagcggc
      361 cgggccggat gcggaggctg cccgggggaa gcacctcgtg gccgcccagg gtggccatgg
      421 gcacgatggg cacaccggca tccatggcca gggcgaagcc tcccttcttg aagggcagca
      481 tctggcccgt gcggttccgc gtcccttccg ggaagatcac cacgttcttg ccgccgcgga
      541 tctgctgcgc cgcggcgtgg atgctctgga tggcgcgctc ccggtcaccg cgatcgatga
      601 agatcacccc tgcggcccag ccggcccagc cgatgaaggg cacgtacttc agctcctgct
      661 tggcgatgta gaccgcgggc acgggcaggg cggccaccag gatcggcgga tccagctggc
      721 tttcgtggtt ggacatgaag atcacggact ggcggccgtc gcggatggcc tcgggcagcc
      781 gttcccatcc cgtgagggtg aaggggacat ggcagaacca ggccatgccg cgggcgaaca
      841 tcgggcccac ggcgaagaag gcgcggcgcg ggccgaggaa gggcatggcc gccaggatcc
      901 ccaggacggt gaccggcacc gtggccaggg cccagaccat catcatggcc cccccgaatc
      961 cagtgttccg ccagttggcc acgcaacccc cctatgctat ttaagctagc agttctgggg
     1021 ggttctcgtg ggcatcaccg aacagatcct ggccgaccac gccgcgcgga agggccccga
     1081 cggcaccacc tggttcaccg cggccgacct ggcgcggctg ggtctccacg atcagctctt
     1141 caccatcatg cagaccgtcc agcacaccct ccgcatgcgg ggggcgcgcc aggtggtaga
     1201 aagccatggc tgcacggacc ggtggagcgt ccaggacaca cactgatccg gatccacgct
     1261 caaaaagcaa ggatcaccac caagacacca agaccaccaa gaacggcctt ctctttcttg
     1321 gtgtcttggt gtcttggtgg tgaaaaaact tttgcggaga tcaggcctgg acgctgacct
     1381 ccatggccgt ggcccgcggg tggaggatct ggttctccag gtagatgtgc aggtgcaggt
     1441 cctgctccag gacttcgaag ccatcgtaga gggcccggaa ggtggcgcac ccatccgcag
     1501 gcactgtgta ggcgccggtg agctcgcgga gctcggccag cagggccccc acggcctcgt
     1561 gctccatctc catgacgcgg atggggctct gcacggtgcc gaagcaggag gatcccgact
     1621 ggccctgctc catctgggtg atgaagggga agaggatctg ctcttctttc atcatgtggg
     1681 gggtgaggtc agccacgagg ccccggtaga gctcagccac gcggaccatc tcggggtgcc
     1741 gctcgccgtg ggcccggagc accttctcga gcagcagctc cagccggggc agctcttcgc
     1801 ggaggtagtc gtggtgggtg gccacgatgt gctggatgag gtcggccaga ggggcctggg
     1861 cccagtcccg gggcgaagcg acgcccgccg tgaagggctc cagggtctcc aggcccttca
     1921 ggatgtccgc cggggcctgg ttcgccacgc ggcaggcctc ctcgagggtg cggtggccgc
     1981 cgcagcagta gtcgatgccc agccgctcga agtaccgcat ggtctcgggc cgcgtcatga
     2041 ccagctcgcc caccttggtg ttgagttcca cgttcatgcc ggctcctcgg cggggaccac
     2101 ccccggactt ccaagatggg gtgccggggg cgtgaggggg atcacatctt gactaaaaag
     2161 gtctgattat ctttaaattg gtgacgtcga tatccaagta gatgatttca tttttcttaa
     2221 tctaccgtga tggacttgga gacgttcttg ggggcgtccg ggtggacccc atggtccgcc
     2281 acggtcaggc ggtcgaggta ctccatcttc agcaccgaca tccggaaggc caggcgctgg
     2341 agggccacgg aggcggcgaa gacgaagagg ttggggtcgc cactgaaggg cacctcgatg
     2401 tacttcgacc agtagcggtc ctggcccatg ggctggccgg ccacggccag ggccagctcg
     2461 ggctgcttct cggcgatgag caggatgtcg gcgccacgga tcttgtgggt gtggatctgg
     2521 ctgatggtga tgcggatgtc gcgctcctcg ctgggacaga cgaagagcag ggggtagttg
     2581 gagaaccgcg tctccaccag ctcgggccag gccttgaggg cctcgatgcc gccgctgaag
     2641 ggccggccat cgcggtgctg ctcatagact tccagcaggc ccgccaggtc ctggatggag
     2701 aacagggtgt tcttgccgag gatggtgttg gggccgtgct tgaactcggc ggcgtcatag
     2761 ccttccgcat ggttgagcac cacctcgcgg atcttcaggg cgccctcccg ggccaggccg
     2821 atgaggccgg tgccgaggat gtgcagcgac ggctccaggt agaggcgctt cgcagcctcc
     2881 tccacatcgg cctcgctggt ccgcagcgtc tccgcaatga ggtccttggc gcgctccagg
     2941 ttcgcggcga tcttgcgttc ggtgagcgag aaggaggccg ccagcacgta gaggatggcc
     3001 acctggttca ggaagctctt ggtggcggcc acggcgatct cggggccgca gaggatgggc
     3061 aggtagaact ccgacagctc ctgggggatg cggctgttct cgttgttcac cagcgaaatg
     3121 cgccgcaggg cgggcactcg gccgcgcacg tccgtgaaga tgtccaccag atccttcgtc
     3181 tcgccggact gggtgatgcc caggagcaga tcgcggggct ggagggcgtt caggtacatg
     3241 gaccggaaca tgccggggtt gcaggggaag acggccacgc cggacaggct gttgaagaag
     3301 gtggccgcca ccagggccgc gtggtacgag gtgccggagg ccaccaggaa gacgcgcccg
     3361 ccctccttct gggtctcgcg gatggcctgc accagctcca tgaggtggcg cgtgacccgg
     3421 cggcgcttct tccagatgaa gagcagatcg aagagggcca gggcctcctg ggcctgggga
     3481 tcgaggcgct ccagatccgc cagcagctgg cgttcgtcgg acacgggccg gccgcggtgg
     3541 gcccgcagca cgtcggcgtg ggccttcacg cgggtggcga gctcgcggtg gacggggtcc
     3601 tccagcaggg cgccgaaggc cgccgccagg gcggtttcgt ggggggcctc gtagagcgcc
     3661 agcactttg
//
LOCUS       DASUDT010000418         6230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1610120, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000418 DASUDT010000000
VERSION     DASUDT010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6230
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610120"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2319)
                     /locus_tag="VFV26_08545"
     CDS             complement(<1..2319)
                     /locus_tag="VFV26_08545"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX4846254.1"
                     /translation="MHTPTESDSYTADNITVLRDLEAVRKRPGMYIGDTDDGSGLHHM
                     VYEVVDNAIDEALAGFCTRVDVILHSDGSCSVEDNGRGIPVDIHKEEGRSAAEVIMTV
                     LHAGGKFDNTSTEGKNAYKVSGGLHGVGVSCVNALSSKLFLTVWKEGQEYAMTFSQGK
                     ADAPLKAVGPTARRGTRVRFQPDPEVFNNVLDFSFEILSQRLRELSYLNQGVHIRITD
                     ERTGDTHDFMNAGGISAFVEHLNRNKPVLHKPPIYIKDEKQDTTVEVALQWNDSYQET
                     LYCFTNNIRNRDGGAHLEGFRAAMTRVINSYAEKNNLLKSAKVSLSGEDVREGLTAVL
                     SAKVPDPKFSSQTKDRLVSSEVKGIVQTIVYEKLSAFFEENPREAKAILEKAIEAARA
                     REAARQARELTRRKGALDGGGLPGKLADCQEKDPALSEIFLVEGDSAGGSAKQGRHRA
                     TQAILPLKGKVLNVEKARFDKILSHNELRVLIQALGTGIGKEEFKVENLRYHKVVLMT
                     DADVDGSHIRTLLLTFFYRQMPELVERGHLYIAQPPLYKVKKGKAEKYLKDERALEEF
                     LFSKALDGWSLTLPDGSEHKGAILVREMKKWGEVQQLYGKLDRRGYARPLVDALLAAG
                     LLDADRFATREALELLAAAITQQKLGTCELETIEAVERAAEGEDPAITIPASHRLRVV
                     RMHLSRPITLWLDNQVAHWGEFRRLAALHAELAGFHGGELRLRRLKDAKETAKDKDED
                     GEEGTTKLGKEQVFGDPEAMLAMVLEEGKRGLG"
     gene            complement(2398..3531)
                     /gene="dnaN"
                     /locus_tag="VFV26_08550"
     CDS             complement(2398..3531)
                     /gene="dnaN"
                     /locus_tag="VFV26_08550"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX4846255.1"
                     /translation="MNLQLQVSKERLDRTLGILKHALDRRVTLPILQHILVDVRPKEV
                     VLKATDMELAFEATVPGEGQGEWTMAVPGKKFIETVRVFPEGILSLECPDAGGRLWLR
                     AKGMNSEHNIQPGEGFPELPGPSKQLPVVKIPVLRFKRAIQLGSIAVSKDATKPTLSA
                     VLLHLSKHHVRVVSTDGFRLAVAEVPCDTNLKDEVRLIVPKRALDLIPTLLGDEGEVE
                     LCWDGTTLFLDQPGLKFSTRLVTGNYPAYEKVLPAELPKRVIMDREVFLRTLRFVGLK
                     KDDYNKNVRLFYEFPNLRTVFQHPDEGVNQATLPFTGEEQPFELAFNIDYLTELLERL
                     PGDEVVYQFKDEVGQGVFMSPSLEDFSFRYVLMPVRFATSATA"
     gene            complement(3746..5203)
                     /gene="dnaA"
                     /locus_tag="VFV26_08555"
     CDS             complement(3746..5203)
                     /gene="dnaA"
                     /locus_tag="VFV26_08555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX4846256.1"
                     /translation="MPALLDNARLRGSATPEAHPPNPVIPMPSVDPAALWDTLRLGLS
                     KQLPEASFKEWIAPCVPQKVEDGTLWIQVPSAAAKLWIEQQLPEEFNDALAQGGLADL
                     RLVFQVSGTPAAEPRPAPKRGSSGAHATITEAPAAFPHLFGRYTLDRFVVGPGSQLAF
                     AAAKAVVDSYGKAATPLSMNPLFIYGGAGLGKTHLMVGIGKGLLARNPKLRVAYLKVD
                     NFFNELTVAIKAKNTEPMRKKYQQNDVLLLDDVQTLGKMERTQEEIFYVLEYLLQHGK
                     QIVLTSDKPPQRLEGCHERLITRFKWGLTADIQPPDFETRIAILKKKLEDADFKNVPP
                     IPDDVLTFIAHKAKGSVRDLEGFLTRVIFQASLLGVPPTLEIAHAAFQGQSGEEPTAA
                     IPPERIYRMTAETFNVAFVDLMKKRSRQQAILLPRQVAMYLAREIASSPFTEIGRSFS
                     MHHSTVMNAIDSVRERMKRDPEFHRMVQALLNSIH"
     gene            5363..5497
                     /gene="rpmH"
                     /locus_tag="VFV26_08560"
     CDS             5363..5497
                     /gene="rpmH"
                     /locus_tag="VFV26_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008650850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX4846257.1"
                     /translation="MKRTFQPNNRRRAKTHGFLSRMKTKNGRLVLKRRRAKGRHVLAV
                     "
     gene            5508..5876
                     /locus_tag="VFV26_08565"
     CDS             5508..5876
                     /locus_tag="VFV26_08565"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX4846258.1"
                     /translation="MIFKGRFRTVRHKDHAVPTPLPRPLLGHDAFLDIRAWRRSGEPG
                     PLLLVTSPRKTGPAVRRNRFRRQVRMAFLALAGRLAGQPWIVWVRPARSAPPLDRLTF
                     RDIEGQLALALRRLPATDTP"
     gene            5873..>6230
                     /locus_tag="VFV26_08570"
     CDS             5873..>6230
                     /locus_tag="VFV26_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846259.1"
                     /translation="MKNRNVLYFVIGSMILLAGQFWLSSRYAKPVPQAQAAPETPAAP
                     AAPTQPVAAPVAAPAPTADVKAADAAATHTLASADFRLTWQVATGALKQATWLQDGTD
                     FFPGAFAGLGALQGAGF"
BASE COUNT          925 a         2005 c         2157 g         1143 t
ORIGIN      
        1 gcccaggccc cgcttgccct cttcgaggac catggccagc atggcctccg ggtcgccgaa
       61 cacctgctcc ttgccgagct tggtggtgcc ctcttcgccg tcctcgtcct tgtccttggc
      121 cgtctccttg gcgtccttca ggcggcggag ccgcagctcg cccccgtgga accccgccag
      181 ctcggcgtgg agggcagcca ggcggcggaa ctcgccccag tgggccacct ggttgtcgag
      241 ccagagggtg atggggcggc tcaggtgcat gcgcaccacg cgaaggcggt ggctggccgg
      301 gatggtgatg gcgggatcct cgccctcggc cgcgcgttcc acggcctcga tcgtctccag
      361 ctcgcaggtg ccgagcttct gctgggtgat ggcggcggcc aggagctcca gggcctcccg
      421 ggtggcgaag cggtccgcgt ccaggaggcc ggcggccagc agggcgtcca ccaggggccg
      481 ggcgtagccg cggcggtcca gcttgccgta gagctgctga acctcgcccc acttcttcat
      541 ctcgcgcacc aggatggcgc ccttgtgctc gctgccgtcc ggcagggtga ggctccagcc
      601 gtccagggcc ttgctgaaga ggaattcctc cagggcccgc tcgtccttca ggtacttctc
      661 ggccttgccc ttcttcacct tgtagagggg gggctgggcg atgtagaggt ggccgcgctc
      721 caccagttcc ggcatctgcc ggtagaagaa ggtgagcagc agggtgcgga tgtgggaacc
      781 gtccacgtcg gcgtcggtca tgagcacgac cttgtggtag cggaggttct cgaccttgaa
      841 ctcctccttg ccgatgcccg tgccaagcgc ctggatgagc acgcgcagct cgttgtggct
      901 gaggatcttg tcgaagcggg ccttctccac gttcagcacc ttgcccttga ggggcaggat
      961 ggcctgggtg gcgcgatggc ggccctgctt ggcgctgccg ccggcggagt cgccctccac
     1021 caggaagatc tcgctgaggg ccggatcctt ctcctggcag tccgccagct tgcccggcag
     1081 gccgcccccg tccagggccc ccttgcgccg ggtcagctca cgggcctggc gggccgcctc
     1141 gcgggcgcgg gcggcctcga tggccttctc caggatggcc ttggcctccc gggggttctc
     1201 ttcgaagaac gccgacagct tctcgtagac gatggtctgg acgatgccct tcacctcgct
     1261 ggacacgagg cggtccttgg tctgactgga aaatttggga tcaggcacct tggcgctgag
     1321 caccgccgtc aggccctcgc ggacgtcttc gcccgagagg ctcaccttgg cgctcttcag
     1381 caggttgttc ttctccgcat agctgttgat gacgcgggtc atggcggccc ggaagccctc
     1441 caggtgggcg ccgccatcgc ggttgcggat attgttcgtg aagcagtaga gggtctcctg
     1501 gtaggagtcg ttccactgga gggccacctc cacggtggtg tcctgcttct cgtccttgat
     1561 gtagatcggg ggcttgtgga ggacgggctt gttgcggttc aggtgttcca cgaaggcgct
     1621 gatgccgccg gcgttcatga agtcgtgggt gtcgccggtg cgctcgtccg tgatgcggat
     1681 gtggacgccc tggttcaggt agctcagctc gcgcaggcgc tggctgagga tctcgaagct
     1741 gaagtccagg acgttgttga agacctcggg atcgggctgg aagcgcacgc gggtgccgcg
     1801 ccgggccgtg ggtcccacgg ccttcagggg ggcgtccgcc ttgccctggg agaaggtcat
     1861 ggcgtattcc tggccctcct tccagaccgt gaggaagagc ttggaggaca gcgcgttcac
     1921 gcaggacacg cccacaccat ggaggccgcc ggacaccttg taggcgttct tcccctcggt
     1981 gctggtgtta tcgaatttcc cgccagcgtg gagcaccgtc atgatcactt cggcggcgct
     2041 gcggccttct tccttgtgga tatccacggg gatgccgcgg ccgttgtctt cgacgctgca
     2101 gctgccgtca ctgtggagga tcacgtccac gcgggtgcag aagcccgcca gggcctcgtc
     2161 gatggcgttg tccaccacct cgtagaccat gtggtgcagg ccgctgccgt catcggtatc
     2221 gccgatgtac atgccgggcc gctttcggac ggcctcgagg tctctcagaa ccgtgatgtt
     2281 gtcggcggtg tagctgtcgg attccgtggg ggtgtgcacg cgtgcgctaa ggacttcttc
     2341 agacatcaag actcacttgg ttgggtacgg tggaatgcgg tgccctgcgg cgccgaatca
     2401 ggccgtggcg ctggtggcga aacggacggg catgaggacg tagcggaagc tgaagtcctc
     2461 caggctgggg gacatgaaga cgccctggcc cacttcatcc ttgaactggt agaccacctc
     2521 gtcgcccggg aggcgctcca gcagctccgt gaggtagtcg atgttgaagg ccagctcgaa
     2581 gggctgttcc tcgcccgtga agggcagtgt ggcctggttc acaccctcgt cggggtgctg
     2641 gaagaccgtg cgcaggttgg ggaattcgta gaacaggcgc acgttcttgt tgtagtcgtc
     2701 cttcttcagg cccacgaagc gcagggtgcg gaggaagacc tcccggtcca tgatcacgcg
     2761 cttgggcagc tcggcgggca gcaccttctc gtaggccggg tagttgccgg tcacgaggcg
     2821 ggtgctgaac ttgaggcccg gctggtccag gaagagcgtg gtgccgtccc agcagagctc
     2881 cacctcgccc tcgtcgccca gcagggtggg gatgaggtcc agggcgcgct tgggcacgat
     2941 gagccgcact tcatccttga ggttcgtatc gcagggcacc tcggccacgg ccaggcggaa
     3001 gccgtccgtg gagaccactc ggacgtggtg cttggacagg tgcaggagca cggcggacag
     3061 tgtgggcttg gtggcgtcct tgctgacggc gatggagccc agctggatgg cccgcttgaa
     3121 ccgcaggacc gggatcttca ccacgggaag ctgtttgctg ggccctggca gctccgggaa
     3181 gccctctccg ggctggatgt tgtgctcgga gttcattccc ttcgcccgaa gccataggcg
     3241 gcccccagcg tccgggcatt cgaggctgag gatcccctca gggaagaccc ggaccgtttc
     3301 gatgaacttc ttgccgggta cagccatggt ccattcgcct tggccttcgc caggaacggt
     3361 ggcctcgaag gccagttcca tgtccgtggc cttgagcacg acttccttcg ggcgcacgtc
     3421 cacgaggatg tgctgaagga tgggcaaggt cacgcgacgg tccaaggcgt gtttcaggat
     3481 ccccagcgtg cgatccaaac gttccttgga aacctgtaac tgaagattca tgaatcaccc
     3541 ttgatgatgc tgaagcgctg ggcaacctgt ggaaagaggt ctcaaagccc tatcctaccg
     3601 gagtttcgcc ctcgagcaca ggctgcggaa aggcccctgg ggggtgtgga aaagaggatc
     3661 ggtcttctcg gaaggccccc gttctatccc gatggtggat cccgggaaga ggagggctgt
     3721 ggatatcgac acaacccctt ttttatcaat gaatgctatt caagagagcc tggaccatcc
     3781 tgtggaattc cggatcgcgc ttcatgcgct cccgcacgga atcgatggcg ttcatgacgg
     3841 tggagtggtg catggagaaa gagcgcccga tttcggtgaa gggcgaggag gcgatctccc
     3901 gcgcgaggta catggccacc tggcggggca ggaggatggc ctgctgccgg gagcgcttct
     3961 tcatgaggtc cacaaaggcc acgttgaagg tctccgcggt catgcggtag atgcgctctg
     4021 gggggatggc ggccgtgggc tcctcgccgc tctggccctg gaaggccgcg tgggcgatct
     4081 ccagggtggg tggcacgccg aggaggctcg cctggaagat gacgcgggtg aggaagccct
     4141 ccaggtcgcg gacgctgcct ttggccttgt gggcgatgaa ggtgagcaca tcgtcgggga
     4201 tgggaggcac gttcttgaaa tccgcgtcct ccagcttctt tttcaggatg gcgatgcggg
     4261 tctcgaagtc cggtggctgg atatcagcgg tgaggcccca tttgaaccgc gtgatgagcc
     4321 gctcgtggca gccctccagc cgctgcggag gcttgtccga ggtgaggacg atctgcttgc
     4381 cgtgctgcag caggtactcg agcacgtaga agatctcctc ctgcgtccgc tccatcttgc
     4441 ccaaggtctg cacatcatcc agcagcagca catcgttctg ctggtacttc ttgcgcatgg
     4501 gttcggtgtt cttggccttg atggccacgg tgagctcgtt gaagaagttg tccaccttga
     4561 ggtaggccac gcggagcttg ggattgcgcg ccagcaggcc cttgccgatg cccaccatga
     4621 ggtgggtctt gccgaggccc gcgccgccgt agatgaacag ggggttcatg ctgaggggcg
     4681 tggcggcctt gccgtagctg tccaccacgg ccttggcggc ggcgaaggcc agctggctgc
     4741 cggggcccac cacgaaacgg tccagcgtgt agcggccgaa caggtggggg aaggccgcgg
     4801 gcgcctccgt gatggtggcg tgggcgccgg aactgccgcg cttgggcgcg ggccggggtt
     4861 ccgcggcggg ggtgccggaa acctggaaca ccaggcgcag atccgccagg ccgccctgcg
     4921 ccagcgcatc gttgaactcc tcgggcagct gctgctcgat ccacagcttg gcggcggcgc
     4981 ttgggacctg gatccacagc gtcccgtcct ccaccttctg gggcacgcag ggggcgatcc
     5041 actccttgaa gctggcttca ggaagctgct tggacaaccc caggcggagg gtgtcccaga
     5101 gggcggcggg atcgacggat ggcatgggta tcaccgggtt cggcgggtgg gcttcgggcg
     5161 tggcggagcc gcgcagacgc gcgttgtcga ggagggcggg catcgcacgc catcggccac
     5221 ggcaggctcg cgggggggat cccaaatcta gcaccccgcg ggatggatgg ggcggtggaa
     5281 atgcccttga gcggggcggg cctcgctgat atcctcgaag gttcgtcctc ctccccggga
     5341 ggggaccccc cgaggtggaa ccatgaagcg cacctttcag cccaacaatc gccgccgcgc
     5401 gaagacccac ggcttcctga gccgcatgaa gacgaagaac ggccgtctgg tgctcaagcg
     5461 ccgccgcgcg aagggccgcc acgtcctggc ggtctgacgc cggttccgtg atcttcaagg
     5521 gccgattccg cacggtccgc cacaaggacc acgcggtgcc cacgcccctg ccccggccgt
     5581 tgctggggca tgacgcgttc ctggacatcc gcgcctggcg cagatccggc gaacccgggc
     5641 ccctgctgct cgtgacctcc ccccgcaaga ccggccccgc cgttcgccgc aaccgcttcc
     5701 gccgccaggt ccggatggcc ttcctggccc ttgccggccg cctggccggg caaccctgga
     5761 tcgtctgggt gcgccccgcg cgaagcgccc cccccctcga ccggctcacc ttccgggaca
     5821 tcgagggcca gctcgcgctg gccctgcgcc gtctccccgc cacggacacg ccatgaaaaa
     5881 ccgcaacgtc ctctacttcg tcatcggcag catgatcctg ctggcgggcc agttctggct
     5941 cagctcccgc tacgccaagc cggtgcccca ggcccaggcc gcaccggaaa cgcccgcggc
     6001 cccggcggcc cccacccagc ccgtggccgc cccggtggcc gcgcccgcgc ccaccgccga
     6061 cgtcaaggcc gcggatgccg ccgccaccca caccctcgcc tccgcggact tccgcctcac
     6121 ctggcaggtg gcgaccggag ccctcaagca ggccacttgg ctgcaggacg gcacggactt
     6181 cttccccggc gccttcgcgg gcctgggcgc cctgcagggc gcggggttcg
//
LOCUS       DASUDT010000419         3935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1720861, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000419 DASUDT010000000
VERSION     DASUDT010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1720861"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VFV26_08575"
     CDS             complement(<1..260)
                     /locus_tag="VFV26_08575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4846260.1"
                     /translation="MAKGVVLVVDDEAPIRDILSFYLKRAGYQVLTAGHGVDALAEMG
                     RLKPDLIISDLRMPEMPGDELCKRVKSDPATQDIYFIILSAL"
     gene            complement(293..631)
                     /locus_tag="VFV26_08580"
     CDS             complement(293..631)
                     /locus_tag="VFV26_08580"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="This anti-anti-sigma factor, or anti-sigma factor
                     antagonist, belongs to a family that includes
                     characterized members SpoIIAA, RsbV, RsfA, and RsfB;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0045152 - antisigma factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HEX4846261.1"
                     /translation="MLNIQTRQEGTASVVSIQGKVNFEVTAQLRDVIRETVATAQPKL
                     LVINLEGVSFIDSSGLGLLVAARNSVDKSGGKLHLSCLPAPVKKTFDQTNLTNYFSIV
                     ATEQDALRGS"
     gene            complement(625..1794)
                     /locus_tag="VFV26_08585"
     CDS             complement(625..1794)
                     /locus_tag="VFV26_08585"
                     /inference="COORDINATES: protein motif:HMM:TIGR04552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04552 family protein"
                     /protein_id="HEX4846262.1"
                     /translation="MRHHTLFPMPPEVTQVILGGGSPIDLDGLRIQSHDEAWNFALNY
                     GYNMGNPIQRAHVGRVYEDAIDFLEGVVLEGTKLHVPNELRHVEDPLDLLVWASERPR
                     TLDGRWSCAILRVMHTLFHVDHNVNLRFLPEIQRQVFSRYDQYLVQEGDRWLLRGAYE
                     VPLVTVERKENKDRVSMLLKMLHKPENVAETIYDQIGIRLVAEDQLGVLMVIRFLLDH
                     HVLMPTHIKPSRSRNLMIDMEALAAWTEAMPPLFQIHDLSAEERRALSHTLALKPGTL
                     EQNPFSSKDYSAIQFTARTLIRLPGPGAPALETLQSRLRDLGLAELAEQARIPELIRE
                     QEEFTFFFAHEVQVMEQSGFQSSRSGPASHSEYKQRQRDAARRRVLQGIIQEEPC"
     gene            complement(1885..2181)
                     /locus_tag="VFV26_08590"
     CDS             complement(1885..2181)
                     /locus_tag="VFV26_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HEX4846263.1"
                     /translation="MKKFLTTAFLFTLAAVAFAQGAPAAPKSLFEGQFVAHLSLAIAA
                     AGCGLAQGKAVVAACEGVARNPQAAGNIRTTMIIGLALIEALVIYVLVAAFAIK"
     gene            complement(2291..3022)
                     /gene="atpB"
                     /locus_tag="VFV26_08595"
     CDS             complement(2291..3022)
                     /gene="atpB"
                     /locus_tag="VFV26_08595"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX4846264.1"
                     /translation="MEHHASLLAQWLTQVLHLEQHPWPGFAHGASLSVLERYDHLLNA
                     ALAALLAMLLTTLVRRKLARIPGPLQQTFEGVVGGLKDMINDNIAHHGERYLPFIGTM
                     ALFVFFNNLFGLLPALSPGTSNWNVTLGAALVVFGYYNFHGMREQGFVKYWAHFAGPI
                     WWLAPLMFPLEILGLLSRILSHSLRLFGNIAGEHVVAGIFFGLMPLLLPVPMMFLGLF
                     FGLIQTFVFTMLATIYLSGAVSHEH"
     gene            complement(3035..3433)
                     /locus_tag="VFV26_08600"
     CDS             complement(3035..3433)
                     /locus_tag="VFV26_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846265.1"
                     /translation="MSESRDEGEGHLRRVTGFMLLLALAGIPLWGLLRSWTAALAFGV
                     GSLASLAFWTLHRYLTARMLTPSVRRRWLYGVLSVGKLALIALVLRGMMGRYPAEALP
                     LALGVLLFVAGILLEALGLAFRKPEATPPD"
     gene            complement(3426..3707)
                     /locus_tag="VFV26_08605"
     CDS             complement(3426..3707)
                     /locus_tag="VFV26_08605"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX4846266.1"
                     /translation="MIFKRNEGADPGERALWGDLMSLGLTFPLCIALGFFLGRWIGSQ
                     FGHPARGQWAGLAWGIAAAFWELYKVNRRMARRDAEELKRLEEKKSPRE"
BASE COUNT          718 a         1210 c         1371 g          636 t
ORIGIN      
        1 tccagagcgg acaggatgat gaagtagatg tcctgcgtgg ccgggtcgct cttgacccgc
       61 ttgcacagct cgtcgccggg catctcgggc atgcgcaggt ccgagatgat gagatccggc
      121 ttcaggcggc ccatctccgc gagggcatcc acgccatggc ccgcggtgag gacctggtag
      181 cccgcccgct tgagatagaa actgaggatg tcccggatgg gggcttcatc gtccaccacc
      241 aggaccacgc ccttggccat gcgaagccct tagcagaggc cgttcccgat catcacgagc
      301 cgcggagcgc gtcctgctcg gtggcgacga tggagaagta gttggtgagg ttggtctggt
      361 cgaaggtctt cttcaccggc gcgggaaggc aggagaggtg cagcttcccg ccggacttgt
      421 cgacgctgtt ccgggcggcg accagcaggc ccagccccga ggaatcgatg aagctcaccc
      481 cttccaggtt gatcaccagg agcttcggct gcgcggtggc caccgtctcc cggatcacgt
      541 cccgcagctg ggcggtcacc tcgaaattga ccttgccctg gatcgacacc acagatgcgg
      601 tgccctcttg gcgggtctgg atgttcagca tggttcctcc tggataattc cctgaagcac
      661 tcttcgacgg gcagcatcgc gctggcgctg cttgtattcc gaatgggatg caggaccaga
      721 tcgtgagctt tgaaaccctg attgttccat cacttggact tcgtgtgcga agaagaaagt
      781 aaactcctcc tgctcccgga tcaactctgg aatgcgggcc tgctcggcga gttccgccaa
      841 gcccaggtcc cggaggcggg actggagggt ctccagggcg ggggccccgg ggcccggcag
      901 ccggatcagg gtgcgcgccg tgaattggat ggccgagtaa tccttgctgg aaaaggggtt
      961 ctgttcgagc gtgccgggct tgagggccag ggtgtggctg agggcccgcc gctcctcggc
     1021 gctgagatca tggatctgga acaggggcgg catggcttcc gtccaggccg ccagggcctc
     1081 catatcgatc atcaggttcc ggctgcggct gggcttgatg tgggtgggca tcagcacgtg
     1141 atgatccagc aggaagcgga tgaccatgag cacgcccagc tggtcctcgg ccaccaggcg
     1201 gatgccgatc tggtcataga tggtctcggc cacgttctcg ggcttgtgga gcatcttcag
     1261 gagcatggac acgcggtcct tgttctcctt gcgctccacc gtgaccagcg gcacctcata
     1321 ggcgccccgc agcagccagc ggtccccctc ctggaccagg tactggtcgt agcggctgaa
     1381 cacctggcgc tggatctccg gcaggaagcg caggttcacg ttgtggtcca cgtggaagag
     1441 ggtgtgcatc acccggagga tggcgcagga ccagcgccca tccagggtgc gggggcgctc
     1501 ggaggcccag accagcaggt ccaggggatc ctccacatgc cggagctcgt tgggcacgtg
     1561 gagcttcgtc ccctccagca cgacgccctc gaggaagtcg atggcatcct cgtagacccg
     1621 ccccacatgg gcccgctgga tcgggttgcc catgttgtag ccgtagttca gggcgaaatt
     1681 ccaggcctcg tcatgggact ggatgcgcag cccgtcaaga tcgatgggcg acccgccgcc
     1741 gaggatcacc tgggtgacct ccgggggcat ggggaaaagg gtatggtgtc gcatgacgtc
     1801 cagcatcttc atcggctcga atgggtaatc ataaaaaaac ggggcgccca gggattgggc
     1861 gccccgccgg aaaccggttt cgtcctactt gatggcgaag gcggcgacga gcacgtagat
     1921 cacgagggcc tcgatgaggg ccaggccgat gatcatggtg gtgcggatgt tgccggcggc
     1981 ctgggggttg cgggccacgc cctcgcaggc ggcgaccacg gccttgccct gggccagacc
     2041 gcagccggcg gccgcgatgg cgagggagag gtgggccacg aactggcctt cgaagaggct
     2101 cttgggggcg gcgggggcgc cctgcgcgaa ggcgacggcg gccagggtga acaggaaggc
     2161 ggtggtgagg aacttcttca tggtggtgct cctaggtggt gcccgaaggg ttcggaatcc
     2221 cgcaggcggt tgaaatcgtt tcacatgcga aaaacgtgag cgggcatagc ccgctcacgt
     2281 ttttcgtaga tcaatgctcg tgcgagactg cgccgctcaa gtagattgtt gccagcatcg
     2341 tgaacacgaa ggtctggatc aggccgaaga agaggcccag gaacatcatg ggcacgggca
     2401 gcagcagggg catgaggccg aagaagatgc ccgccaccac gtgctcgccc gcgatgttgc
     2461 cgaagagacg gagggagtgg ctgaggatgc ggctgagcag gcccaggatc tccaggggga
     2521 acatgagggg cgccagccac cagatggggc cggcgaagtg ggcccagtac ttcacgaagc
     2581 cctgttccct catgccgtgg aagttgtagt agccgaacac caccagggcc gcgcccaggg
     2641 tgacgttcca gttgctggtg ccggggctca gggcgggaag caggccgaag aggttgttga
     2701 agaagacgaa cagcgccatg gtgccgatga agggcaggta gcgctcgccg tggtgcgcga
     2761 tgttgtcgtt gatcatgtcc ttcaggccgc cgaccacgcc ttcgaaggtc tgctgcaggg
     2821 ggccggggat ccgggccagc ttgcggcgga ccagggtggt gagcagcatg gccagcaggg
     2881 ccgccagggc agcgttcagc aggtggtcgt agcgttccag cacggacagg gacgccccgt
     2941 gcgcgaaacc aggccaggga tgctgttcca ggtgcagcac ctgggtcagc cactgggcga
     3001 gcaacgatgc gtggtgttcc atatcggtcg gacctcaatc aggcggcgtg gcttcgggtt
     3061 tccggaaggc cagacccagc gcttccagca ggataccggc cacgaagagg agcactccaa
     3121 gggccagcgg caaggcttcc gccgggtatc tccccatcat cccacgcagc accagcgcga
     3181 tcaacgccag tttgcccacg gagaggacgc cgtagagcca tctccgccgc acggaaggcg
     3241 tcagcatgcg ggccgtcagg taccggtgca gggtccagaa ggccaggctg gccagggatc
     3301 ccacgccgaa ggccagcgcc gccgtccagg agcgcagcag gccccagagg gggatccccg
     3361 ccaaggccag caggagcatg aagcccgtga cccgccggag gtggccctcg ccctcgtccc
     3421 ggctctcact cacggggact cttcttttct tcgaggcgct tcagctcctc cgcatcgcgc
     3481 cgggccatgc gccggttcac cttgtagagc tcccagaagg ccgcggcaat gccccaggcc
     3541 aggcccgccc actggccccg ggcgggatgt ccgaactggc tcccgatcca ccggcccagg
     3601 aagaagccca gggcgatgca gaggggaaag gtgagcccca gggacatgag gtcgccccac
     3661 agggcccgct cacccggatc cgccccctca ttccgcttga agatcacaac caccccagag
     3721 acaaggcgcg ggcaccccgc gccctccagt gtacgccggg ggctgggaaa ggcgctccca
     3781 cggagaaaag cagaagcccg gcattgccgg gcttctgcgc gggggtccgg ggggaggctc
     3841 catgtccacg agccagaggc gagtgggaac gacgcacagc gtcgtgtcac atggaggcgc
     3901 gcaagcgcga ccttagatcc ttgcgacgca cgcgt
//
LOCUS       DASUDT010000420         5312 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1610220, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000420 DASUDT010000000
VERSION     DASUDT010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5312
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610220"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VFV26_08610"
     CDS             <1..326
                     /locus_tag="VFV26_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846267.1"
                     /translation="EGQEGGEPAAVAPAGHVHGPDCGHDHDHEAEAKPAKKAPKAKQE
                     AEPAKDPVKKAASKAEPESVAQPKKAAAKKEEPAAEKPKKAPAKKEEPAAEEKPKAKK
                     PVAKK"
     gene            403..999
                     /gene="clpP"
                     /locus_tag="VFV26_08615"
     CDS             403..999
                     /gene="clpP"
                     /locus_tag="VFV26_08615"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEX4846268.1"
                     /translation="MPSSYYPPIVIEQTPRGERSYDIYSRLLKDNIIFLGTPIDDSVA
                     NAIVAQMLFLESEDPDKDIQIYINSPGGSVTAGLAIYDTMQFVKNDIVTYCIGQCASM
                     GAHLLSAGTKGKRFALPNARIMIHQPSGGAQGQATEIEITYKEIQRLKDNLAATFAKH
                     TGQPLKKVMKDMDRDYFMSAEEALEYGIVDKVLSERPA"
     gene            999..2126
                     /locus_tag="VFV26_08620"
     CDS             999..2126
                     /locus_tag="VFV26_08620"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4846269.1"
                     /translation="MSQSLSSVPGFEHLSRIPLYVPGKPIQEVQRELGLASIVKLASN
                     ENPWGPTEAVKARVASVIAGSEFEGLGLYPVSDGFYLRQRIAERKGLSVDRVVLGNGS
                     SEILEMVAKAAFLDGGSAVIPRHSFAIYGIATQTAGGRVIESRGTATELDADDILRSV
                     ADDTRLVYLGHPNNPTGIRLERAALERLVKGLREDIVLVVDQAYAEYEDPAEYPDAAA
                     YLDQRPNLLVLHTFSKIHALAALRIGFGLGSKELMGFLERVRSPFNTNHLAQAAAEVA
                     VQDLAFEAFSRQKNVEARAAFVAEAAKHRCQTSGTSGNFILLESAIPAADLFKQLLQR
                     GVIVRPMQGYGLPNHIRVSFGKPEEMAAFWKAAAPLLDGGC"
     gene            2127..3815
                     /locus_tag="VFV26_08625"
     CDS             2127..3815
                     /locus_tag="VFV26_08625"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HEX4846270.1"
                     /translation="MAQVPDEIGRLRDLLAQGAHVECRVGLARLRDRYRIEPALFDAP
                     AIAALKALAADLDAPPDLEATLKATFGYGTFRPGQRAIIEAVLAGRDVVGIMPTGAGK
                     SLTYQLPARLLGGVTLVVSPLIALMKDQVDALTEAGLRATFLNSSLAVEARRERIRAL
                     MNGQIELVYAAPEGLELYLADLLREVDLRLIAVDEAHCISHWGHDFRPAYRTLAGLKQ
                     RFPKVPVLALTATATPEVRRDIAAQLEMRHPLEVQGSFFRSNLRISAYRKGADGIPPI
                     REALLRLVLARRGESGIIYCLSRKAVESTAAFLSEEGVRAAPYHAGMDAAARSAAQEA
                     FQRDDVDVIVATVAFGMGIDKSNIRYVIHRDMPKSVEGWYQEIGRAGRDGADADCVMF
                     YSWGDVLSYDRFTDGLDSGLAQAQQRQTRDLFRLAEAPRCRHQALLAHFGEAMEACGA
                     SCDVCSGADPLEAAPRPGKAKRGSPRGTRPALPEGPVDGEEALYRELKILRKQLADAK
                     GVPAYVIFSDATLQQMARFQPATEAEFLALSGVGPKKLQQYGEAFLRLLRQLGR"
     gene            4013..>5312
                     /locus_tag="VFV26_08630"
     CDS             4013..>5312
                     /locus_tag="VFV26_08630"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HEX4846271.1"
                     /translation="MVRLAFQLGNNWMTLAGVALTTSSAFTLVWFWLMELTSPKPVHP
                     YAGILLFLILPSIFLVGLILIPFGIHRVRRKKRLAGEAPTPLQKVDFTQPAVRRLLLV
                     VGALTFLNVGILGTAGLKGVEYMDSNRFCGLTCHTVMSPEYTAFLDSPHSRVGCAQCH
                     IGHGAPALVKAKLSGTRQLFAVAFGTYSRPIPSPVEHLRPARETCEQCHWPQKFTGEK
                     LLIRTKYAEDEANTPATSVLLLKIGGHTPNGTTGIHGRHLDVSERISYITTDPRRQEI
                     PKVTYRDDNGQLIDFVTEDYKKLAPEKVAQLTLRKMDCIDCHNRPTHAFELPDRAVDK
                     ALNNKRMSAELPYIKKKAVELLKGEYASRDEAASKIVLAINEFYRTSYPDVFKHKRAQ
                     VDAAAETVKAIYLRNVFPEMKLLWGTHPNNIGHEEAVGCFR"
BASE COUNT          953 a         1957 c         1637 g          765 t
ORIGIN      
        1 tggaaggcca ggaaggtggc gagcccgccg ccgtggcccc cgccggccac gtccatggcc
       61 ccgactgtgg ccacgaccat gaccatgagg ccgaggccaa gcccgcgaag aaggcgccga
      121 aggccaagca ggaggcggaa cccgccaagg atccggtgaa gaaggctgcg tccaaggctg
      181 aaccggaatc cgtggcacag ccgaagaagg ccgccgcgaa aaaggaagag cctgccgcgg
      241 agaagccgaa gaaggccccg gcgaagaagg aagaacccgc cgccgaggaa aagcccaagg
      301 cgaagaagcc cgtggccaag aagtagctgc cggcgcgatt ccatgctgaa ggcgcctcac
      361 ggcgccttct tgctttatcc tgaagcttca gccggagggc ccatgcccag cagctactat
      421 ccccccatcg tcatcgagca gacgccgcgc ggcgaacgca gctatgacat ctactcgcgc
      481 ctgctcaagg acaacatcat cttcctgggc acccccatcg acgacagcgt ggccaacgcc
      541 atcgtggccc agatgctgtt cctcgaaagc gaggacccgg acaaggacat ccagatctac
      601 ataaacagcc ccggcggcag cgtcaccgcg ggcctggcca tctacgacac catgcagttc
      661 gtgaagaacg acatcgtcac ctactgcatc ggccagtgcg cctccatggg cgcccacctg
      721 ctctccgcgg gcaccaaggg caagcgcttc gccctgccca acgcgcgcat catgatccac
      781 cagcccagcg gcggcgccca gggccaggcc acggagatcg agatcaccta caaggagatc
      841 cagcgcctga aggacaacct ggccgccacc ttcgccaagc acacgggcca gcccctgaag
      901 aaggtcatga aggacatgga ccgcgactac ttcatgagcg ccgaggaagc cctcgaatac
      961 ggcatcgtgg acaaggtcct ttcggagcgc cccgcctgat gagccagagc ctttcctccg
     1021 tcccgggatt cgagcacctg tcccgcattc ccctctacgt gcccggcaag cccatccagg
     1081 aagtccagcg cgagctgggc ctcgcctcca tcgtcaagct ggcctccaac gagaatccct
     1141 ggggccccac cgaggccgtg aaggcccgcg tggcctccgt catcgccggt tcggagttcg
     1201 agggcctggg cctctacccg gtcagcgacg gcttctacct ccgccagcgc atcgcggagc
     1261 gcaagggcct gtccgtggac cgcgtggtgc tgggcaacgg cagcagcgag atcctggaga
     1321 tggtggccaa ggccgccttc ctggatggcg gcagcgccgt catccccagg cacagcttcg
     1381 ccatctacgg catcgccacc cagaccgcgg gcggacgcgt catcgaatcc cggggcacgg
     1441 cgaccgagct cgatgccgac gacatcctgc gctccgtggc cgatgacacc cgcctggtct
     1501 acctgggcca ccccaacaac cccacgggca tccgcctgga gcgcgcggcc ctcgagcgcc
     1561 tcgtgaaggg cctgcgcgaa gacatcgtgc tcgtcgtgga tcaggcctac gccgagtacg
     1621 aggatcccgc cgaatacccc gatgccgccg cctacctgga ccagcgcccg aacctgctgg
     1681 tgctgcacac cttctccaag atccacgccc tggccgccct gcgcatcggt ttcggtctgg
     1741 ggtccaagga gctgatgggc ttcctggagc gcgtccgcag ccccttcaac accaaccacc
     1801 tggcccaggc cgccgcggaa gtcgccgtgc aggatctggc cttcgaagcc ttctcgcgcc
     1861 agaagaacgt cgaagcccgc gccgccttcg tggcggaagc cgcgaagcac cgctgccaga
     1921 cctcggggac cagcggcaat ttcatcctgc tggaaagcgc catccccgcc gcggacctct
     1981 tcaagcagct gctccagcgt ggcgtgatcg tgcggcccat gcagggctac gggttgccga
     2041 accacatccg ggtctccttc ggaaagcccg aagagatggc cgccttctgg aaggccgccg
     2101 cccccctcct cgacggcggt tgctgagtgg cgcaggtccc ggacgaaatc gggcggctgc
     2161 gcgacctgct ggcccaaggc gcgcatgtgg aatgccgggt gggcctggcg cgcctgcggg
     2221 accgctaccg gatcgagccc gccctcttcg atgccccggc catcgcggcc ctgaaggccc
     2281 tggccgcgga cctggacgcc ccgccggacc tggaggccac cctcaaggcc accttcggct
     2341 acggcacctt ccgccccggc cagcgggcca tcatcgaagc ggtgctggcg ggccgcgacg
     2401 tggtgggcat catgcccacg ggtgccggga aatcgctcac ctaccagctg ccggcgcggc
     2461 tgctgggggg cgtcaccctg gtggtctcac ccctcatcgc cctgatgaag gatcaggtcg
     2521 atgccctcac ggaagccggc ctccgcgcca ccttcctcaa ctccagcctg gcggtggagg
     2581 cgcggcggga gcgcatccgc gccctcatga acggccagat cgagctggtc tacgccgcgc
     2641 cggaagggct cgagctctac ctcgcggacc tgctccgcga ggtggacctg cgcctcatcg
     2701 ccgtggacga ggcccactgc atcagccact ggggccacga cttccggccc gcctaccgca
     2761 ccctggcggg cctgaagcag cgcttcccca aggtgccggt gctggccctc acggccacgg
     2821 ccacgccgga agtgcgccgc gacatcgccg cccagctgga gatgcggcac ccgctggagg
     2881 tgcagggttc cttcttccgg tccaacctgc gcatcagcgc ctaccggaag ggcgctgacg
     2941 gaatcccacc catccgcgag gccctgctgc gcctggtgct ggcccggcgc ggcgagagcg
     3001 gcatcatcta ctgcctgtcg cggaaggcgg tggaatccac ggcggccttc ctcagcgaag
     3061 aaggcgtccg ggccgcgccc taccacgcgg gcatggacgc cgcggcgcgc tccgccgccc
     3121 aggaggcctt ccagcgggac gacgtggacg tcatcgtggc cacggtggcc ttcggcatgg
     3181 gcatcgacaa gagcaacatc cgctacgtca tccaccgcga catgcccaag agcgtggagg
     3241 gctggtacca ggagatcggc cgggcaggcc gcgatggcgc cgatgccgac tgcgtgatgt
     3301 tctacagctg gggcgatgtg ctcagctacg accgcttcac ggacggcctg gattccggcc
     3361 tggcccaggc ccagcagcgg cagacccgcg acctcttccg cctggcggaa gcgcctcgct
     3421 gccgccatca ggccctgctg gcccacttcg gggaggccat ggaagcctgc ggcgcctcct
     3481 gcgatgtctg ctccggcgcc gatcccctgg aggccgcgcc gaggcccggc aaggccaagc
     3541 gcggatcgcc ccggggcacc cgcccggccc tgcccgaggg gcccgtggac ggcgaggagg
     3601 cgctgtaccg ggagttgaag atcctccgga aacagctggc tgacgccaag ggcgtgcccg
     3661 cctacgtgat cttcagcgac gccaccctcc agcagatggc ccggttccag ccggccacgg
     3721 aggccgaatt cttagctctg agcggggtcg gaccgaaaaa gctgcagcag tacggggagg
     3781 ccttcctccg cctgctgcgc cagctggggc gctgacgggc ctagacatct gtcacaaccc
     3841 ggaatacccc tccttgatat caatggggtt acatcaggcc cccaggccct ccccgcttgc
     3901 ggaggccctg ggaggaaatt agggtgggaa gaggcattcc ccactcggat gtcatttgtt
     3961 tcgccacttg gatggaggta cgcccatgag cctaggagaa cgtgtcagag acttggtcag
     4021 gctggccttc cagctgggca acaactggat gaccctggcg ggcgtggccc tgacgaccag
     4081 ctcggccttc accctcgtct ggttctggtt gatggagctg acgagtccga agccggtcca
     4141 tccctatgcg ggcatcctgc tcttcctcat ccttcccagc atcttcctgg tgggcctgat
     4201 cctcattccc ttcggcatcc accgggtgcg ccggaagaag cggctggccg gcgaagcgcc
     4261 gactccactc cagaaggtcg atttcaccca gcctgccgtg cggcggctgc tgctggtggt
     4321 gggcgcgctg accttcctga acgtcggcat cctcggcacc gcgggcctca agggcgtcga
     4381 gtacatggat tccaaccgct tctgcggcct cacctgccac acggtgatga gccccgagta
     4441 caccgccttc ctcgactccc cccattcccg cgtgggctgc gcccagtgcc acatcggcca
     4501 cggcgccccg gccctggtga aggcgaagct ctccggcacc cgccagctct tcgcagtggc
     4561 cttcggcacc tactcccgcc cgatccccag ccccgtcgag cacctgcgcc cggcccgcga
     4621 gacctgcgaa cagtgccact ggccccagaa gttcaccggc gagaagctcc tcatccgcac
     4681 caagtacgcc gaggatgaag ccaacacccc cgccacctcc gtgctcctcc tgaagatcgg
     4741 cggccacacg cccaacggca ccaccggcat ccacggccgc cacctggacg tcagcgagcg
     4801 catcagctac atcaccaccg acccccgccg gcaggagatc cccaaagtca cctaccggga
     4861 cgacaatggc cagctcatcg atttcgtcac cgaggactac aagaagctgg cccccgagaa
     4921 ggtggcccag ctcaccctcc gcaagatgga ctgcatcgac tgccacaacc gccccaccca
     4981 cgccttcgaa ctccccgacc gcgccgtgga caaggccctc aacaacaagc gcatgagcgc
     5041 tgagctgccc tacatcaaga agaaggccgt ggaactgctg aagggcgaat acgcctcccg
     5101 cgacgaggcc gcctcgaaga tcgtcctggc catcaacgag ttctaccgga ccagctatcc
     5161 cgatgtgttc aagcacaagc gcgcccaggt ggacgccgcc gcggaaaccg tgaaggccat
     5221 ctacctccgc aacgtcttcc ccgagatgaa gctgctctgg ggcacccacc ccaacaacat
     5281 cggacatgag gaggccgtgg gctgcttccg ct
//
LOCUS       DASUDT010000421         3202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_20220, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000421 DASUDT010000000
VERSION     DASUDT010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20220"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1012
                     /locus_tag="VFV26_08635"
     CDS             <1..1012
                     /locus_tag="VFV26_08635"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4846272.1"
                     /translation="DPPEAPFFWPIPTLAQRVVHTRPTLRHRLEYGAFRLLDGVLGRM
                     PMATVQALGEVAGTVFRLVDARHRRVVRDNLRKSGLAASEAEARALSRICFKHFGALF
                     VGLLRLRRATPEELIRWIHVEGLEHFDAAQAEGKGFIQLTGHYGHWEVIALGQSLHGR
                     TVDAIGRELDNPLLEPISHGFRTRFGNQVILKKGAMRGTLKALKAGRGVGFLLDQDAL
                     GMGIFVRFLGQWASTFPTAGNLAVRYGLPILPVFSWPNADGSWTVRFEPPFHAPVTGD
                     LARDEWTATQLMTARIEAQIRKDPRWWFWMHNRFKTQPDPGASAPLPPADWVESLQPP
                     LV"
     gene            1063..1533
                     /locus_tag="VFV26_08640"
     CDS             1063..1533
                     /locus_tag="VFV26_08640"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX4846273.1"
                     /translation="MPKHVLVKLEQELKDIKQALLVEIPQEIARAAGQGDLSENAEYE
                     QALAKRDMFQNKLVTLEKRISEVASLDISRLPKSRAAYGSKVTILDLDSEEEFTYTLV
                     LPEELDGHPQHLSISSPIGMALVGQEEGNEVRVQIPAGIRRFEILELKTIHDVA"
     gene            1558..2802
                     /gene="clpX"
                     /locus_tag="VFV26_08645"
     CDS             1558..2802
                     /gene="clpX"
                     /locus_tag="VFV26_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEX4846274.1"
                     /translation="MNKYKREQKCSFCGKEPHEVEQLLAGPEAFICNECLEAGQLQLR
                     MSRQGKPLGKPDARLSRPKEIKGFLDDYVIGQESAKKRLSVAVYNHYKRIVTPRKALG
                     AAEVELSKSNILLLGPTGTGKTLLAQTLARFLDVPLAMADATTLTEAGYVGEDVENIL
                     TKLLQAANYDVERAQRGIVFIDEIDKVGRKSENPSITRDVSGEGVQQALLKLVEGTVA
                     NVPPQGGRKHPHQEFIQLDTSNILFICGGAFVGIEDIIKQRIRAKAVGFGSTPSSKED
                     KENLLRLVEPEDIIKFGLIPELVGRLPVVAGLSPLDREALVAILTQPKNAITKQFVKL
                     FDMDDVDLSFEEGAIDAIAEQALTRKLGARGLRSLVEQILLEPMYELPSDKRTSRETL
                     RITRQKVEEALGLPSQPISAAG"
     gene            2956..>3202
                     /locus_tag="VFV26_08650"
     CDS             2956..>3202
                     /locus_tag="VFV26_08650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX4846275.1"
                     /translation="MAVPKTLTLPAIPIRDMVLFPGARVPFVVGRSASVRTLELAIKA
                     GDHLLMLTQKDSKVETPAQEDLFPMGTLALVESVIALP"
BASE COUNT          568 a         1121 c         1000 g          513 t
ORIGIN      
        1 ggatcctccc gaggcgcctt ttttctggcc cattcccacc ttggctcaac gtgttgtcca
       61 tacccggccc accctccggc accgcctgga gtacggggcc ttccgcctcc tggacggcgt
      121 cctgggccgg atgcccatgg ccacggtgca ggcccttggc gaggtggcgg gcacggtgtt
      181 ccgcctggtg gatgcccggc accgccgggt ggtccgggac aacctccgca aatccggcct
      241 ggccgcgtcc gaggccgagg cccgcgccct ttcccggatc tgcttcaagc acttcggcgc
      301 cctctttgtg ggcctgctgc gcctgcgccg cgccacgccg gaagagctca tccggtggat
      361 ccatgtcgaa gggctggagc acttcgatgc ggcccaggcc gaggggaagg gcttcatcca
      421 gctcacgggc cactacggcc actgggaagt gatcgccctg gggcagagcc tccatggccg
      481 caccgtggat gccatcgggc gggagctgga caatcccctg ctggagccca tctcccacgg
      541 cttccgcacc cgcttcggaa accaggtgat cctcaagaag ggcgccatgc ggggaaccct
      601 gaaagccctc aaggccggac gcggcgtggg cttcctgctg gatcaggacg ccctgggcat
      661 gggcatcttc gtgaggttcc tggggcagtg ggcctcgacc ttccccaccg ccgggaacct
      721 ggcagtccgg tacgggctgc cgattctgcc cgttttcagc tggcccaatg ccgatgggag
      781 ctggacggtc cgcttcgagc cccccttcca tgcccccgtg accggcgacc tggcccggga
      841 cgaatggacg gccacccagc tcatgaccgc ccgcatcgag gcccagatcc ggaaagaccc
      901 ccgctggtgg ttctggatgc acaaccgctt caagacgcaa ccagacccgg gagcctccgc
      961 tccgcttccc ccggcagatt gggtagaatc acttcaacct ccccttgtct gaccgggccc
     1021 ttcggcccgc ctttttttga cccccctttt caggacatcc ccatgcccaa gcacgtgctt
     1081 gtgaagctcg aacaggaact caaggacatc aagcaggcgc tcctggtgga gatcccccag
     1141 gagatcgccc gggccgccgg gcagggcgac ctctcggaga acgccgaata cgagcaggcc
     1201 ctggccaagc gggacatgtt ccagaacaag ctcgtcaccc tggagaagcg catctccgag
     1261 gtggccagcc tggacatcag ccgcctgccc aagtcccggg ccgcctacgg gtccaaagtc
     1321 acgatcctcg acctggattc cgaggaggag ttcacctaca cgctggtgct gcctgaggaa
     1381 ctcgatggcc atcctcagca cctcagcatc agctccccca tcggcatggc gctggtgggc
     1441 caggaggagg gcaacgaggt gcgcgtccag atccccgcgg gcatccgccg cttcgagatc
     1501 ctggaactga agaccattca cgatgtagcc tagtgcggcc ccaggagggg acctcgaatg
     1561 aataagtaca agcgcgagca gaaatgctcc ttctgcggca aagagcccca cgaggtggag
     1621 cagctcctgg cggggcccga ggccttcatc tgcaacgagt gcctggaggc cggccagctg
     1681 cagctgcgca tgagccgcca gggcaagccc ctgggcaagc ccgatgcccg gctgagccgc
     1741 cccaaggaga tcaagggctt cctggatgac tacgtcatcg gccaggaatc cgccaagaag
     1801 cggctgagcg tggcggtcta caaccactac aagcgcatcg tcaccccccg gaaggccctg
     1861 ggcgccgccg aggtggagct gtccaagagc aacatcctgc tgctgggccc cacgggcacg
     1921 ggcaagaccc tgctggccca gaccctggcc cgcttcctgg acgtgcccct ggccatggcc
     1981 gatgccacca cgctgacgga agccggctac gtgggcgagg acgtggagaa catcctcacc
     2041 aagctgctgc aggccgccaa ctacgatgtg gagcgggccc agcggggcat cgtcttcatc
     2101 gacgagatcg acaaggtggg ccgcaagagc gagaacccca gcatcacccg cgatgtgagc
     2161 ggcgagggcg tgcagcaggc cctgctgaag ctcgtcgagg gcaccgtggc caacgtgccg
     2221 ccccagggcg gacgcaagca tccgcaccag gagttcatcc agctggacac cagcaacatc
     2281 ctgttcatct gcggcggcgc cttcgtgggc atcgaggaca tcatcaagca gcgcatccgc
     2341 gccaaggccg tgggcttcgg ctccacgccc tcctccaagg aggacaagga gaacctgctg
     2401 cgtctcgtcg agcccgagga catcatcaag ttcggcctca tccccgagct ggtgggccgc
     2461 ctgcccgtgg tggcgggcct ttcgcccctg gaccgcgagg ccctggtggc catcctcacc
     2521 cagcccaaga acgccatcac caagcagttc gtgaagctgt tcgacatgga cgacgtggac
     2581 ctgagcttcg aggagggcgc catcgacgcc atcgccgagc aggccctcac ccgcaagctg
     2641 ggcgcccgcg gcctgcgcag cctggtggag cagatcctgc tggagcccat gtacgagctg
     2701 ccctcggaca agcgcacgtc ccgcgagacg ctgcgcatca cccggcagaa ggtggaagag
     2761 gcgctgggcc tgccctccca gcccatctcc gctgcaggct gagattcagg aactgactca
     2821 ccacggagac acggagatca cagaggtgct cacggagaaa agatgatgac tcaatcggat
     2881 tgcagttctt actccgtgtc ttttctcagt gtcctccgtg cctccgtggt gaatctcttt
     2941 ctttagggcg ctccgatggc cgttcccaag acgctgaccc tgccggccat ccccatccgg
     3001 gacatggtgc tgttccccgg ggcgcgggtt cccttcgtgg tgggccggtc cgcctcggtg
     3061 cgcacgctgg agctggccat caaggccggc gaccacctgc tgatgctcac gcagaaggat
     3121 tccaaggtgg agaccccggc ccaggaggat ctcttcccca tgggcaccct ggccctggtg
     3181 gaatccgtca tcgccctgcc ca
//
LOCUS       DASUDT010000422         3478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2140564, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000422 DASUDT010000000
VERSION     DASUDT010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2140564"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VFV26_08655"
     CDS             <1..298
                     /locus_tag="VFV26_08655"
                     /inference="COORDINATES: protein motif:HMM:NF014628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lactate utilization protein"
                     /protein_id="HEX4846276.1"
                     /translation="FTGTIGGVAETGSLLLLPGPAEPRLMSLVPPIHIALLRASTIHD
                     TFWSAVKTLGWGRALPPNALMISGPSKTADIEQTLAYGVHGPKRLIVVLVDDLA"
     gene            335..411
                     /locus_tag="VFV26_08660"
     tRNA            335..411
                     /locus_tag="VFV26_08660"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:369..371,aa:Met,seq:cat)
     gene            complement(766..3279)
                     /locus_tag="VFV26_08665"
     CDS             complement(766..3279)
                     /locus_tag="VFV26_08665"
                     /inference="COORDINATES: protein motif:HMM:NF019136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HEX4846277.1"
                     /translation="MLCALSLAAGGWSRPFAVMGPAQGLPSGAITTLTQDADGFIWMG
                     TESGLLRYEGGQCRRWTREDGLPSGFIHRVLPAPGGGVWAATLRGLVRLRDGRIEAAR
                     FGQLPVPTAADTIALDHQGRLWAMTRDGLYVQGEGVQFQRRAPRPSGLSATLTAGTRG
                     AMHLGTPAGLTTFLPDGSQKDWGPAQGLPAGGVSMVVEDGEGRLWAGSGRNLAMKSRD
                     GERFTDQSGRLGASLSPNSVPFVDADGSIWLPTQAGALHLSGDRTERIDAAGGLPFRW
                     VRTVFRDREGSLWVLGTALARLQGGGRVWNHALVGGTSGEVVWSITHAPGGEILAATD
                     DGALRVAPTAVTRISGTEGQRIKSLALDRTGTLWMVSSIGPTLWLRPGRAKAEPAPLG
                     DLGMAVNSVMEDSHGRVWLSHTRRGILRWDPTARRLVQDVKPDGSGSLGVFRIREDAQ
                     GRLWAATTAGLYLRDPAGSWTLFTEKHGLLSFGLYGLAFLPDGSAWIHYQEPQGLMRV
                     RVEGDRLTVLEQRTKGQGLHSNLVYAVEVDSQGRTWATTDQGLDRVDPALHIGQQDGM
                     VSEDCAIQALLAEKGRIWVGTAAGLVRYDADGSEAPVPPAQAHILQFTHGERRLEPPF
                     DGLAPVPHREGTVSFRLGAPTYLDERHTRFQVRLLGLEEAWQDADSSMVRYTALPGGR
                     YRFEARAMAKDGAYGPVATFDFQVRPPWWRTWWAMSLSGLALLGAGFAILRLRVAALA
                     RSKAELEALVAKRTEELRTRNAELTTALGEVKQLSGLLPICASCKKIRDDKGYWNQLE
                     HYFSERSGVDFTHGICPDCVGAMFPKRGKTGQGEPKAES"
BASE COUNT          519 a         1265 c         1188 g          506 t
ORIGIN      
        1 cttcaccggc accatcggcg gtgtggccga gaccggcagc ctcctcctgc tccccggccc
       61 cgcggaaccg cggctcatgt cgctggtgcc gcccatccac atcgccctgc tgcgggcctc
      121 caccatccac gacaccttct ggtccgccgt gaagaccctg ggctggggcc gcgccctgcc
      181 ccccaacgcc ctgatgatct ccggccccag caagaccgcc gacatcgagc agaccctcgc
      241 ctacggcgtc cacggcccca agcggctcat cgtggtgctc gtggacgatc tggcgtagac
      301 gcaggcccac gcccgcgcta cactgttcct tcatggctgg gtagctcagg tggttagagc
      361 gagggtctca taatccctag gtcggcagtt cgagtctgcc tccagccacc accaagaaca
      421 ccggagccga gtgctccggt gtttttgtac gcccacccaa gccaccagac tcgagctgcc
      481 gagaagcagt ggcggcccgg tagcccgcag cgagcaaggc cccagtgggg cctgcgcagc
      541 gcccgcgggc ggggccagcc acgcgccagt tcgagtctgc ctccagccac caccacaagc
      601 cccctaaatc gccaagattc agggggtttg gtctatatag ccgcactccg atgcactgag
      661 gtgaacgact ccgcagtgcg ttgaacggcc tgatgggatg attcaaggaa gaggatacgc
      721 gcatcccggg ccggcccccc tgcgaagtcc cctgccccgg ccggttcagc tctctgcctt
      781 cggctccccc tggccggtct ttccccgctt ggggaacatg gcgcccacgc agtcggggca
      841 gatgccgtgg gtgaagtcca cgccggagcg ttcgctgaag tagtgctcca gctggttcca
      901 gtagcccttg tcgtcccgga tcttcttgca gctggcgcag atgggcagga ggccggagag
      961 ctgcttcacc tcgccgaggg cggtggtgag ctcggcgttc cgggtgcgca gttcctccgt
     1021 gcgcttggcc acgagggcct ccagttcggc cttgctgcgg gccagggcgg ccacgcggag
     1081 gcggaggatc gcgaagccag cccccaggag ggccaggccc gacaggctca tggcccacca
     1141 ggtccgccac cagggagggc gcacctggaa atcgaacgtc gccacgggac cataggcgcc
     1201 gtccttggcc atggcgcggg cttcgaaacg gtagcggccg ccgggcagcg cggtgtaccg
     1261 gaccatggat gagtcggcat cctgccacgc ctcctccaga cccaggagcc gcacctggaa
     1321 ccgggtatgc cgctcgtcca ggtacgtggg ggcccccagc cggaaggaca cggtgccttc
     1381 gcgatgcggc accggggcga ggccatcgaa gggaggctcc agccgccgtt ccccgtgggt
     1441 gaactggagg atgtgcgcct gggccggtgg aaccggcgcc tcgcttccgt ccgcatcgta
     1501 gcgcaccagg ccggcggcgg ttcccaccca gatgcgccct ttttcggcca ggagggcctg
     1561 gatggcgcag tcctcgctca ccatgccgtc ctgctggccg atgtgcagcg ctggatccac
     1621 gcggtccaac ccctggtccg tggtggccca ggtccggccc tggctgtcca cttccaccgc
     1681 atagaccagg ttcgaatgga ggccctgccc cttcgtgcgc tgctccagca ccgtgagccg
     1741 atccccctcc acacggaccc gcatgaggcc ctgaggctcc tggtagtgaa tccaggcact
     1801 cccatcgggc aggaaggcca ggccgtagag cccaaaggac aggagtccgt gtttttccgt
     1861 gaacaatgtc caggaccctg ccgggtctct caggtacagg cccgccgtgg tggcggccca
     1921 gaggcgcccc tgggcatcct cgcggatgcg gaagaccccc agggagccgg acccatcagg
     1981 cttgacgtcc tgaacgagcc ggcgcgcggt gggatcccag cgcaggatgc cgcgccgggt
     2041 gtggctcagc cagacccggc cgtgggagtc ctccatcacg ctgttcacgg ccatgcccag
     2101 atccccaagg ggtgcgggct cggccttggc gcgcccgggg cggagccaga gggtgggccc
     2161 gatgctgctg accatccaga gggtgcccgt ccggtccagg gccaggctct tgatgcgctg
     2221 gccttcggtg ccggagatgc gtgtgacggc cgtgggggcc acccgcaggg cgccgtcgtc
     2281 cgtggcggcg agaatctcgc ccccgggggc atgggtgatg gaccagacca cctcgccgga
     2341 ggttcccccg accagggcgt ggttccagac gcgcccgccg ccctggagcc gggccagggc
     2401 cgtgcccagc acccagaggc tgccctcccg gtcccggaag accgtgcgga cccagcggaa
     2461 ggggagcccg cccgccgcat cgatgcgttc ggtccggtcc cccgagagat gcagggcgcc
     2521 cgcctgggtg gggagccaga tggagccatc ggcatcgacg aaggggacgc tgttggggga
     2581 caggctggcg cccagacggc cggactggtc cgtgaagcgc tcgccatcgc gggatttcat
     2641 ggccaggttc cggccggaac ccgcccacag acggccctcg ccatcctcca ccaccatgga
     2701 gacgcccccg gcgggaagcc cctgggccgg gccccagtcc ttctgggagc cgtccggcag
     2761 gaaggtcgtc aggcccgccg gggttcccag gtgcatggca ccccgggtcc ccgcggtcag
     2821 ggtggcgctc agtccggagg gccggggcgc ccggcgctgg aactgcacac cctccccctg
     2881 gacgtacagg ccatcccggg tcatggccca gagccggccc tggtggtcga gggcgatggt
     2941 gtcggcggcg gtgggcacgg gcagttggcc gaagcgcgcg gcctcgatgc ggccatcccg
     3001 gagccgcacc agcccccgca gcgtggccgc ccacacgccg ccgccggggg cgggcagcac
     3061 ccggtggatg aagcccgagg gcaggccgtc ctcgcgggtc cagcgccggc attggccgcc
     3121 ttcatagcgg agcaggccgc tttccgttcc catccagatg aagccatccg catcctgggt
     3181 cagggtcgtg atggcgcctg agggcagtcc ctgggccggt cccatcacgg cgaaggggcg
     3241 gctccagccc cccgccgcca agctgagcgc acagagcacc cctgccccga cgatcctgat
     3301 ccaagccacg cccatgccca tccacttact ctgaggcatc cctgcgggaa ccgccatcct
     3361 cattgggctg aggcatcagg tccggcccag cacccgctgg tacagcgctt cgtactggtc
     3421 cacgactggc ccctcggcga aggtgccgag ggcgcgctcc cgggcggtgc ggcccatg
//
LOCUS       DASUDT010000423         3597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1080441, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000423 DASUDT010000000
VERSION     DASUDT010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3597
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080441"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VFV26_08670"
     CDS             <1..770
                     /locus_tag="VFV26_08670"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEX4846278.1"
                     /translation="GLEDAAKELGPKHPFVVAVLGGRKPADVAKALVEGTKLGDPALR
                     KALVEGGAKAVAESTDPMVLLARKLEPMLLALRRKQDGVKAIFDEHGARIAKARFAVY
                     GKNTYPDATFTLRLSYGAVAEYPANGTLIQPFTTFGGLFDRHDGWGGNAAKAHRGDWA
                     LPQSWVDKRGALDMSLPFNFAHKVDIIGGNSGSPVIDKKGELVGLIFDGNIEMLPGNY
                     FYDGTANRGVSVDARAIIHALDKVYGATALVAELTGK"
     gene            877..2964
                     /locus_tag="VFV26_08675"
     CDS             877..2964
                     /locus_tag="VFV26_08675"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEX4846279.1"
                     /translation="MRRLSALALLLVLPALRAEEGMWTFDNLPLKQLKEKYAFEPGKE
                     WIDHVRLSTLTLGGCTGSFVSAEGLVLTNHHCTRGSIQRLSTKDRDLVKNGFVAMSRD
                     QEIKIPGLTYRTLMAMENVTERVAKAVKPGLSEKAAAAARAMELEAIKAELEKKSGLA
                     YDVVNLYQGGETWMYGFKVFKDIRLVAAPEIAVGAFGGDYDNFTYPRHDLDFSMVRVY
                     ENDKPYRPSHHLTWSTEGLKNGDLTFVVGHPGRTSRLQTFAQMKYDRDLGIPAYLKGA
                     ERTRGILEEYGKRSPEHARQVQTLILGVNNGAKANEGSLMGLKDAAAMKRIEDAEKAL
                     KAAVAKNPKLAAITGQSWARIEQAIQMQKGYLKEAQHLGSARSTTLGQALALVRLADQ
                     LDLPVEKRLAEYRSEGGLKTLKTRLAGPAMGMMGQAPNPEQELHLFTRGLEDAAKELG
                     AKHPFVIAALAGKKPEEAAKAALDGTKLGDPSVRKALVDGGKKAVAEIGDPMIQLARK
                     LEPILLGLRKKQDDVRAILEEHGARIAKARFAVYGKTLPPDATGTLRITYGPVATYPA
                     NGTLQQPFTTWAGLYDRHFGWGGNEAKAYNGEWMLPQRWLDRMGQLDLRTPLNFSHAV
                     DTTGGNSGSPVVNRKGELVGLLFDGNIEGNAGRYYYDDKVNRSVSVDARAILESLVKI
                     YDAPHLAAELTGK"
     gene            3089..>3597
                     /locus_tag="VFV26_08680"
     CDS             3089..>3597
                     /locus_tag="VFV26_08680"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEX4846280.1"
                     /translation="MRLATLGLLLAALPALRADEGMWTFDNIPVQKIKAKYGVDLDAA
                     WLKNLQLATVRFPGGTGAFVSRDGLVVTNHHVGRGAIAQVSTAQADLVKHGFTAARRS
                     QEIQVPGLELMMLVSMRDVTGRVNAAVTPGMADKDALTARRNALGEIRRTEEAKTGLT
                     CEPVVLYQGG"
BASE COUNT          663 a         1294 c         1139 g          501 t
ORIGIN      
        1 ggggcctgga ggacgctgcc aaggaactcg gaccgaagca tcccttcgtg gtcgccgtcc
       61 tgggcggccg caagccggcc gacgtggcca aggccctggt ggaaggcacc aagctcgggg
      121 accccgccct gcggaaggcc ctggtcgagg gcggcgccaa ggccgtggcc gagagcacgg
      181 atcccatggt cctgctggcc cgcaagctcg agcccatgct gctggccctc cgccggaagc
      241 aggatggcgt gaaggccatc ttcgacgagc acggcgcccg catcgccaag gcccgcttcg
      301 cggtctacgg caagaacacc tatcccgacg ccaccttcac cctgcgcctc agctacggcg
      361 ccgtggccga ataccccgcc aacggcaccc tgatccagcc cttcaccacc ttcggcggcc
      421 tcttcgaccg ccacgacggc tggggcggca atgcggccaa ggcccaccgc ggcgactggg
      481 ccctgcccca gagctgggtg gacaagcgcg gcgcgctgga catgtcgctc cccttcaact
      541 tcgcccacaa ggtggacatc atcggcggca actcgggctc gcccgtgatc gacaagaagg
      601 gcgagctggt gggcctcatc ttcgacggca acatcgagat gctccccggc aactacttct
      661 acgacggcac cgccaaccgc ggcgtctccg tggatgcccg cgccatcatc catgccctgg
      721 acaaggtcta cggcgccacc gcgctcgtgg ccgagctgac cggcaagtaa gacaagctct
      781 tgtccacaga tttcacagat tcacacagat ttccttactt tcttcatctg tgaaaatctg
      841 tggaatctgt ggattaaaaa ctttcctgga gcccccatgc gccgcctctc cgccctcgcc
      901 ctcctcctgg tcctccccgc cctccgggcc gaggagggca tgtggacctt cgacaacctg
      961 ccgctcaagc agctcaagga gaagtacgcc ttcgagcccg gcaaggagtg gatcgaccac
     1021 gtgcgcctct ccaccctcac cctgggcggc tgcacgggct ccttcgtgag cgccgagggg
     1081 ctggtgctca ccaaccacca ctgcacccgc ggctccatcc agcgcctgtc caccaaggac
     1141 cgcgacctgg tgaagaacgg cttcgtggcc atgagccgcg accaggagat caagatcccc
     1201 ggcctcacct accgcaccct catggccatg gagaacgtga cggagcgtgt cgccaaggcc
     1261 gtgaaaccgg gcctgagcga gaaggccgcg gcggcggccc gggcgatgga actggaggcc
     1321 atcaaggcgg agctggagaa gaagagcggc ctcgcctacg acgtggtgaa cctctaccag
     1381 ggcggcgaga cctggatgta cggcttcaag gtcttcaagg acatccgcct ggtggcggcg
     1441 cccgagatcg ccgtgggggc cttcggcggc gactacgaca acttcaccta cccccgccac
     1501 gacctggact tctccatggt ccgcgtctac gagaacgaca agccctaccg cccctcccac
     1561 cacctgacct ggagcaccga aggcctgaag aacggcgacc tcaccttcgt ggtgggccac
     1621 cccggccgca ccagccgcct gcagaccttc gcccagatga agtacgaccg cgacctgggc
     1681 atccccgcct acctgaaggg cgcggagcgc acccgcggca tcctggagga gtacgggaag
     1741 cgcagccccg agcacgcccg ccaggtgcag accctgatcc tgggcgtcaa caacggcgcc
     1801 aaggccaacg agggctccct catgggcctg aaggatgcgg ccgccatgaa gcgcatcgag
     1861 gatgcggaaa aggccctgaa ggccgccgtg gccaagaacc ccaagctggc ggccatcacc
     1921 ggccagagct gggcgcgcat cgagcaggcc atccagatgc agaagggcta cctcaaggag
     1981 gcccagcacc tgggctccgc ccgctccacc accctgggcc aggccctggc cctggtgcgc
     2041 ctcgccgacc agctggacct gccggtggag aagcgcctcg cggaataccg ctccgagggg
     2101 ggcctcaaga ccctgaagac ccgcctcgcc gggcccgcca tgggcatgat gggccaggcg
     2161 ccgaacccgg agcaggagct gcacctgttc acgcgggggc tggaggacgc ggcgaaggag
     2221 ttgggggcca agcacccctt cgtgatcgcg gcgctcgccg ggaagaagcc tgaggaggcg
     2281 gccaaggccg ccctggatgg gaccaagctc ggcgatccct ccgtgcgcaa ggccctggtg
     2341 gacggcggga agaaggccgt ggcggagatc ggcgatccca tgatccagct ggcccgcaag
     2401 ctcgagccca tcctcctggg cctgcggaag aagcaggacg atgtccgcgc catcctggaa
     2461 gagcacggcg cccgcatcgc caaggcccgc ttcgccgtct acggcaagac cctgccgccg
     2521 gatgccacgg gcaccctccg catcacctac ggccccgtgg ccacctaccc ggccaacggc
     2581 accctccagc agcccttcac cacctgggcc ggcctctacg accgccactt cggctggggc
     2641 ggcaacgagg ccaaggccta caacggcgag tggatgctgc cccagcgctg gctggaccgc
     2701 atgggccagc tggacctccg gacgcccctc aacttctccc acgccgtgga caccacgggc
     2761 ggcaactccg gcagccccgt ggtgaaccgc aagggcgagc tggtgggcct cctcttcgac
     2821 ggcaacatcg aggggaacgc cggccgctac tactacgacg acaaggtgaa ccgcagcgtc
     2881 tccgtagacg cccgcgccat cctcgaatcc ctcgtcaaga tctacgacgc gccccacctc
     2941 gccgccgagc tgaccgggaa gtaactcaaa agtctttggt ccacagattc cacagatttc
     3001 acagattcaa aggcataaga aatctgtgtg aatctgtgga atctgtggaa tctgtggaat
     3061 ctgtggattg tcttttcagg gagttctcat gcgcctcgcc accctcgggc tcctccttgc
     3121 cgccctgccc gcgctgcgcg cggacgaggg catgtggacc ttcgacaaca tcccggtcca
     3181 gaagatcaag gccaagtacg gcgtggacct cgacgccgcc tggctgaaga acctccagct
     3241 ggccacggtg cgcttccccg ggggcacggg ggccttcgtg agccgcgacg ggctggtggt
     3301 gaccaaccac catgtgggcc gcggcgccat cgcccaggtc tccacagccc aggcggacct
     3361 ggtgaagcac ggcttcaccg ccgccaggcg gagccaggag atccaggtgc cggggctgga
     3421 gctgatgatg ctcgtctcca tgcgggacgt gacgggccgg gtgaatgccg ccgtgacgcc
     3481 gggcatggcg gacaaggacg ccctcaccgc ccggcgcaac gccctgggcg agatccgccg
     3541 gaccgaggag gcgaagacgg gcctcacctg cgagcccgtg gtgctgtacc agggcgg
//
LOCUS       DASUDT010000424         2623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_240664, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000424 DASUDT010000000
VERSION     DASUDT010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240664"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..1638
                     /locus_tag="VFV26_08685"
     CDS             208..1638
                     /locus_tag="VFV26_08685"
                     /inference="COORDINATES: protein motif:HMM:NF024985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4139 domain-containing protein"
                     /protein_id="HEX4846281.1"
                     /translation="MRSALLLAALPSLLIAQETVTTLKDQKALAVTIYNDNLALVKDT
                     REVRLPRGEARLAFQEVSAQIRPETALLRNLTAAKDFWVAEQNFDFDLLTPQKLLEKY
                     VGEKVTVVRSVPNESGAGTKEVREEATVLATNGGTVLQFADRIETSVPGRIVYPRVPG
                     NLRARPTLVISLNSGVDRDQKLELSYLTGGLSWRADYVANLSADEKTLDLSGWVTLTN
                     QSGAAYPNATLQLVAGDVNRARQRPDRAYAVGAMMEKAAPPAPKMAEESLFEYHLYTL
                     DRPTTLAVNQTKQVALLSASTVPVRKEYLLQGQNHYYSGSYGDLGEKQKVGVFVEFDN
                     KEASRLGMPLPKGIIRVYKRDSEGRAQFVGEDSVDHTPKNEQVRLKLGDAFDVTARRK
                     QTDFKSLGRQGKFGSVYESAFEVELKNAKKESVTVSLLEPMPGDWEMLQSSHPFTKEA
                     AGTARFKVTVPAEGSAKLTYRVRVKW"
     gene            1858..2622
                     /locus_tag="VFV26_08690"
     CDS             1858..2622
                     /locus_tag="VFV26_08690"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEX4846282.1"
                     /translation="MPLPARFLARLRRLPLRLRGRLGGGTEGLHPSKLKGAGLTFVEN
                     RPYVPGDDPRFINWPLTARTGEPIMKRFESSRDLVLWLVVDPSPSMFLGDPVSPLRWA
                     MELCGAAFATLQATGDRLGLIVPGDGRTPALRIAPKRGRIHGLRILEMLAERGPSIPT
                     EAAWREALGHWGEHGKGHRLWLFSNGAGLRGLAPLLKPLATRHRLVWFQPEALEGPRA
                     MTWPDPEFSPAIERQRWNLIEDPVVKLNAWLRAGGA"
BASE COUNT          480 a          900 c          850 g          393 t
ORIGIN      
        1 agaagctttg aaagcggagg aaagcagagg gatggaggaa gcggagaaca acggtcaaac
       61 ccgtcacctt ttctccgctt tccccggccc tttcgctgcc cttcgcttat tttttcaatt
      121 tcgttgccaa tccatgaaag ggtcctcacg ctcgcggcat gaccttgtat cgggcccacc
      181 ccgcccgcca cacttcctgg aggttccatg cgttccgccc tgctgctcgc cgccctgccc
      241 tcactcctga tcgcgcagga gactgtcacc acgctgaagg accagaaggc cctggcggtc
      301 acgatctaca acgacaacct ggccctggtg aaagacaccc gcgaggtgcg gctgcccagg
      361 ggcgaagccc ggctggcctt ccaggaggtg tcggcccaga tccggcccga aacggccctg
      421 ctgaggaacc tcacggctgc gaaggatttc tgggtggcgg aacagaactt cgacttcgac
      481 ctgctcaccc cccagaagct gctggagaaa tacgtgggcg agaaggtgac ggtggtgcgc
      541 agcgtgccga acgaatccgg tgccgggacg aaagaggtgc gcgaggaggc cacggtgctg
      601 gccaccaatg gcggtaccgt gctgcagttc gcggatcgca tcgagaccag cgttcccggc
      661 cgcatcgtct acccgagggt gccggggaac ctgcgggccc ggcccaccct ggtcatcagc
      721 ctgaacagcg gtgtggaccg cgaccagaag ctggagctga gctatctcac gggcggcctc
      781 tcctggcgcg ccgactacgt ggcgaacctc tcagcggatg agaagaccct cgacctcagc
      841 ggctgggtga ccctcaccaa ccagagcggc gccgcctatc ccaacgccac cctgcagctg
      901 gtggcggggg atgtgaaccg ggcaagacag cgccccgacc gggcctacgc cgtgggcgcc
      961 atgatggaga aggccgcccc acctgccccc aagatggccg aggagagcct cttcgaatac
     1021 cacctctaca ccctggaccg ccccaccacc ctggccgtga accagaccaa gcaggtggcc
     1081 ctgctcagcg ccagcaccgt gcccgtccgc aaggaatacc tgctccaggg gcagaaccac
     1141 tactactccg gcagctacgg cgatctgggc gagaagcaga aggtgggcgt cttcgtggag
     1201 ttcgacaaca aggaggccag ccgactgggc atgcccctgc ccaagggcat catccgcgtc
     1261 tacaagcgcg acagcgaggg ccgcgcccag ttcgtgggcg aggacagcgt ggaccacacc
     1321 ccgaagaacg agcaggtgcg cctgaagctg ggcgacgcct tcgatgtcac cgccaggcgc
     1381 aagcagacgg acttcaagag cctgggccgc caggggaagt tcggcagcgt gtacgaatcg
     1441 gccttcgagg tggagctgaa gaacgccaaa aaagagtccg tcaccgtgag cctgctggag
     1501 cccatgcccg gcgactggga gatgctgcaa agcagccacc ccttcaccaa ggaggccgcg
     1561 ggcaccgcgc gcttcaaggt gacggtgccc gccgaaggca gcgccaagct gacctatcgg
     1621 gtgcgggtga agtggtaggg caggtggtca gtctgaagtc tggagtctgg agtctggagg
     1681 aaccgatccc tgtggcggcc tctggccgct acagaattca cctttgggcc aggcagcctg
     1741 aatgggtcgt acccaactga aaaactggcg cggcgcagag cgccgcatca gagagccgtg
     1801 cctccagacc ccagtctccg gtctccagcc taaaagattc cgccatactg accccccatg
     1861 cccctgcccg cccgcttcct tgcccgcctg cgacgcctgc cgctgcgcct gcgggggcgc
     1921 ctgggcgggg gcacggaagg gctgcatcct tccaagctca agggcgcggg cctcaccttc
     1981 gtggagaacc ggccctacgt gccgggcgat gatccccgct tcatcaactg gcccctgacg
     2041 gcgcgcacgg gcgaacccat catgaagcgc ttcgagagca gccgcgacct ggtgctttgg
     2101 ctggtggtgg atccgtcgcc ctccatgttc ctgggcgatc ccgtctcgcc gctgcgctgg
     2161 gccatggaac tctgcggcgc ggccttcgcc acgctccagg ccacgggcga ccgcctgggc
     2221 ctcatcgtgc ccggggacgg ccgcaccccc gccctgcgca tcgcgcccaa gcggggccgc
     2281 atccacggcc tgcgcattct cgaaatgctg gcagagcggg ggccatccat tcccacggag
     2341 gccgcctggc gcgaagccct ggggcactgg ggcgagcacg gaaaggggca tcgcctctgg
     2401 ctcttcagca acggcgcggg cctgcggggc ctggcgcccc tgctgaagcc cctggccaca
     2461 cggcaccgcc tggtttggtt ccagccggag gccctggaag gcccccgggc catgacctgg
     2521 cccgatccgg aattctcccc ggccatcgaa cggcagcgct ggaatctgat cgaagacccc
     2581 gtggtcaagc tcaatgcgtg gctaagggcg gggggggcgt aat
//
LOCUS       DASUDT010000425         4837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1610300, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000425 DASUDT010000000
VERSION     DASUDT010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4837
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610300"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..360)
                     /locus_tag="VFV26_08695"
     CDS             complement(82..360)
                     /locus_tag="VFV26_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846283.1"
                     /translation="MTRTLNQPAASRPGLERNGATALQRRMAERLAEIKTRGGLLPVC
                     SWCLKVRDEAGFWADVDRNLLEGTGVPITHGLCPECSSTHFPQRPDAA"
     gene            complement(483..1046)
                     /locus_tag="VFV26_08700"
     CDS             complement(483..1046)
                     /locus_tag="VFV26_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846284.1"
                     /translation="MVSTCLVWMKDALRKGAPYPPMNLLLAGNEENGELEPMGTHHVL
                     KALKDKWAYEPSFFIAGERTGEKGTELWGEVCTQNRGVLRFELVAHGARGHSGLAVGS
                     DLTERLLGAREALRGLFAQRLTLASADGWQSLARFAYIQVGTPGIYNITPDRGALGVE
                     IRPIPQDLPSIDPYYRALEAYAAALKS"
     gene            complement(1203..2612)
                     /locus_tag="VFV26_08705"
     CDS             complement(1203..2612)
                     /locus_tag="VFV26_08705"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX4846285.1"
                     /translation="MDAQEFRRLGYQLVDWIADYREGLERLPVMSRVQPGDIRAAFPD
                     HPPLHGGRMDQALAALDRDVLPGITHWNHPSFFAYFPSNTSYSSILGDLAASGLGAQG
                     MSWQTSPAATEVEEVVMDWLRQMVGLSTAFTGVIHDTASTATFTALLCARERASEYAQ
                     NGEGLQSGEAPLVVYASDQGHSSIEKAALLAGFGRSFLRLIPTDENHAIRLDLLQAAI
                     EKDIEIGLRPCALVGAVGTTGTTALDPVAALADLAEQHGLWLHVDAALAGTAMVLPEC
                     RWMWAGVERADSLVFNPHKWMGVGFDLSAYYVRDPQHLIRVMSTNPSYLRTAQDGQVS
                     NFRDWHIQLGRRFRALKLWFYLMDVGVEGLQARLRRDLENAQWLKEQVDASPDWERLA
                     PVPLQTVCLRHTQLGLSEAELAAHNLEIARRINEGGRAYLTPSLLKGRQMLRVSIGAE
                     STERRHVEALWESLKAAAL"
     gene            complement(2858..3631)
                     /locus_tag="VFV26_08710"
     CDS             complement(2858..3631)
                     /locus_tag="VFV26_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX4846286.1"
                     /translation="MRALPLFLLLAALPLAADEPAPAKTTPKPAPKAQAHAAPAPVDT
                     PDSPSAALAELASGNARFVAGKRVRTLDTGRDAAMRAALANGQAPFAVIITCSDSRVP
                     DSLVFDQEAGRLFTIREAGNTPDLQGLASAEYAAEHLGSKVIVVMGHTSCGAVKAVRE
                     ANGKPLPFNLWALQAGMAGLLESTPQDPNEDAKAHIARLEEVHARRQAQVLLDRSSLL
                     RDLTAAEKVWVVPALYHLASGKVQFFKPITALPPAQAHH"
     gene            3766..>4837
                     /locus_tag="VFV26_08715"
     CDS             3766..>4837
                     /locus_tag="VFV26_08715"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HEX4846287.1"
                     /translation="MKLVLVAIHVEPSPRAVPLGPAMLASALKVKLGGAVQTRIVDAF
                     VGEPAAACAARILASDPDLVGFSMYVWNRSLALETAACLRAAKPGLVIFAGGAEATAD
                     AEGVLADPSVDFVLPGEGEELIVEAMTRLLQGAAPASIAAWARPSPVKDLAALSSPFL
                     DGTLRPEDYGGALWEISRGCPFTCDFCFESRGTAGIRRIPLARVEAELELFQARGVQE
                     VFVLDPTFNYHKAQAKQVLRLMAEKAPDIQFFFEVRSEFLDEEMAGLFAAIRCTLQIG
                     LQSAHDEVLRHISRAFDPGDFEAKILLLHQAGVPYGFDLIYGLPGDSLGGFRESVDFA
                     MGLVPNHLDVFRLSVLPGTRLAE"
BASE COUNT          675 a         1586 c         1791 g          785 t
ORIGIN      
        1 cgcccatcta cgggaaggat ggcccgaagc catagggccc gtcatcaagg cgggcggcgc
       61 ctcgcgtctc gcgcggggcg ctcaggccgc gtccggccgc tgcgggaaat gcgtgcttga
      121 acactcgggg cagagcccgt gggtgatcgg cacgccggtt ccttccagga ggttgcggtc
      181 cacgtcggcc cagaagcccg cttcatcacg gaccttaagg caccagctgc acaccggcag
      241 cagcccgccc cgggtcttga tctccgcgag gcgttccgcc atccgccgct ggagggcggt
      301 ggcgccattc ctttccaggc ccggccgcga agccgcgggc tggttcaacg tgcgagtcat
      361 cgaaggcatc tccggggctc cgggaaggtc aggatcggcc tgtcctgaag cccatcctta
      421 tgatgcgcag aagaacctgt tttgacagtg atattcggca cgatccgggc ggctcctgtg
      481 ggtcaggact tcagggcggc ggcgtaagcc tccagggccc ggtagtaggg atcgatgctg
      541 gggaggtcct gggggatggg acggatctcc acgcccaggg cgccgcggtc cggcgtgatg
      601 ttgtagatgc cgggcgtgcc cacctggatg taggcgaaac gggccaggga ctgccagccg
      661 tcggcggagg ccagcgtgag gcgctgcgcg aagagcccgc gcagggcctc gcgggcgccc
      721 agcagccgct ccgtgagatc ggatcccacc gccagcccgc tgtgcccccg ggcgccgtgg
      781 gcgacgagct cgaagcgcag cacgccgcga ttctgggtgc agacctcgcc ccagagctcc
      841 gtgccctttt cccccgtgcg ctcgcctgcg atgaagaagg acggttcgta ggcccatttg
      901 tccttcagcg ccttcagcac atggtgcgtg cccatgggtt ccagttcacc gttctcctcg
      961 ttgcccgcca gcagcaggtt catgggcggg tagggcgccc ccttcctgag ggcgtccttc
     1021 atccacacca ggcaggtgga gaccacggtc ttcatgtccg cggcgcggtg gacctcaggc
     1081 aggcgctcct cggggcagcc ggtgacgctg gggcggcgca gatggaccga tgcgaaaaag
     1141 tcgtccccgc gaatacgcag ggacgacggg ctttttccga ggatagcggg ggtggaggcg
     1201 ggttaaagcg cggcggcctt caaggattcc cacagtgctt cgacgtgccg ccgctcggtg
     1261 ctttcggcgc cgatgctcac gcggagcatc tgccggccct tgagcagaga aggcgtgagg
     1321 taggccctgc caccctcgtt gatgcggcgg gcgatctcca ggttgtgggc ggcgagctcg
     1381 gcctcgctga ggccgagctg cgtgtgccga aggcacacgg tttgtaaggg cacgggggct
     1441 aggcgctccc agtcggggct ggcatccacc tgttccttca gccactgggc gttctccaga
     1501 tcccggcgga gccgtgcctg caggccctcc acgcccacgt ccatgaggta gaaccagagc
     1561 ttgagcgccc ggaagcggcg acccagctgg atgtgccagt cgcggaagtt gcttacctgg
     1621 ccgtcctggg ccgtgcgcag gtagctgggg ttggtgctca tgacgcggat gaggtgctgc
     1681 gggtcgcgca cgtagtaggc gctgaggtcg aagcccacac ccatccactt gtgggggttg
     1741 aagaccaggc tgtcggcccg ctccacgccc gcccacatcc accggcactc aggcagcacc
     1801 atggccgtgc ccgccagggc cgcgtccacg tgaagccaca ggccgtgctg ctccgccagg
     1861 tccgccaggg cggcgacggg atccagggcg gtggtgcccg tggtgcccac ggcgcccacc
     1921 agtgcgcagg gacgcaggcc gatctcgatg tccttctcga tggccgcctg cagcaggtcg
     1981 aggcggatgg cgtggttctc gtcggtgggg atgagccgca ggaagctgcg gccgaagccc
     2041 gccagcaggg cggccttctc gatggagctg tggccctggt cgctggcgta gaccaccagg
     2101 ggcgcctcgc cgctctggag gccctctccg ttctgtgcgt actccgaggc cctctcccgg
     2161 gcgcagagca gggccgtgaa ggtggcggtg ctggcggtgt cgtggatgac gccggtgaag
     2221 gcggtgctca ggcccaccat ctggcgcagc cagtccatga ccacctcctc gacctccgtg
     2281 gccgcggggc tggtctgcca gctcatgccc tgggcgccca ggcccgaggc cgcaaggtcg
     2341 ccgaggatcg agctgtagct ggtgttgctg gggaagtagg cgaagaagga tgggtggttc
     2401 cagtgggtga tgcccggcag cacatcccgg tccagagccg ccagggcctg gtccatgcgc
     2461 cccccgtgca ggggcgggtg gtccgggaag gcggcgcgga tgtcgccggg ctggacccgg
     2521 ctcatgaccg gcaggcgctc caggccttcg cggtagtccg cgatccagtc cacgagctgg
     2581 taaccgaggc ggcggaattc ttgggcgtcc atgccctcag tgtggccgga accggctggc
     2641 atggggagac tggccgggcc gggttccagg ccactgcacc ttggcggccc cggaagggcc
     2701 cggccacaat gggccctcat ccgcaccgcg agccagtgca ccgtgaagaa gcagatggag
     2761 cacccgccgg ccttcgaggt gaggacggtg gtggtgggct gaggacggga cggcggatcc
     2821 ggagatcccc ggctcgcatc tctgtggaat atcggcccta gtggtgcgcc tgcgctgggg
     2881 gaagcgccgt gatcggcttg aagaactgca ccttgccgct ggccaggtgg tagagggctg
     2941 gcacgaccca gaccttttcc gcggcggtga gatcccgcag caggctcgag cggtcgagca
     3001 gcacctgggc ctggcggcgg gcgtggacct cctccagtcg cgcgatgtgg gccttggcgt
     3061 cctcgttggg atcctggggc gtgctctcca gcaggcccgc catgccggcc tggagggccc
     3121 agaggttgaa gggcaggggc ttgccgttgg cctcgcgcac ggctttcacg gccccgcagc
     3181 tggtgtggcc catgacgacg atgaccttgg agcccaggtg ctcagcggcg tattccgcgg
     3241 aggcgaggcc ctggaggtcc ggtgtgttcc cggcttcgcg gatggtgaag aggcgccccg
     3301 cctcctggtc gaagaccagg ctgtccggca cccggctgtc cgagcaggtg atgatcacgg
     3361 cgaagggggc ctggccgttt gcgagggccg cgcgcatggc agcgtcacgg ccggtgtcga
     3421 gggtacgcac gcgcttgccg gccacgaagc gggcattgcc cgaggccagt tccgccaggg
     3481 cggcgctggg gctgtccggg gtgtccaccg gggcgggggc ggcatgggcc tgggccttgg
     3541 gggcgggctt gggggtggtc ttggccggag cgggctcatc cgccgcgagc ggcagggcgg
     3601 cgaggagcag gaacaggggc agggcgcgca tggggtctcc ggggactctc cctggatcgg
     3661 cggggaccgg aggactcctg aattcacggc cgcgcctgga cgggcggaga tcctgtttcc
     3721 cgcatgcttc ggggttctgc cgtaggcttc agggaaggcg gaatcatgaa gctggtgctg
     3781 gtggccatcc acgtcgaacc ctctccccgg gccgtgcccc tgggcccggc catgctcgcc
     3841 tccgccctca aggtcaagct gggcggggcg gtgcagaccc gcatcgtcga cgccttcgtg
     3901 ggggagcccg ccgcggcctg cgcggcgcgg atcctggctt cggatccgga cctggtgggc
     3961 ttctccatgt acgtgtggaa ccgctcgttg gccctggaga ccgccgcctg cctgagggcc
     4021 gcgaagccgg gcctggtcat cttcgcgggc ggggccgagg ccacggcgga tgcggagggc
     4081 gtcctggcgg atccatccgt ggatttcgtg ctgccggggg aaggggaaga gctgatcgtc
     4141 gaggcgatga cgcgcctcct ccagggcgcc gcaccggcct ccatcgccgc ctgggccagg
     4201 ccctccccgg tgaaggatct ggcggccctc tcctcgccct tcctggacgg caccctgcgg
     4261 ccggaggact atggcggcgc gctgtgggag atctcgcggg gctgcccctt cacctgcgat
     4321 ttctgcttcg aatcgcgggg cacggcgggc atccggcgca tccccctggc gcgggtggag
     4381 gctgagctgg agctcttcca ggcccggggc gtccaggagg tcttcgtcct ggatcccacc
     4441 ttcaactacc acaaggccca ggcgaaacag gtgctgcggc tcatggcgga gaaggccccg
     4501 gacatccagt tcttcttcga ggtccgcagc gaattcctgg acgaggagat ggccgggctc
     4561 ttcgcggcca tccgctgcac cctgcagatc ggcctccaga gcgcccacga cgaggtgctc
     4621 cgccacatca gccgggcctt cgacccgggc gatttcgagg cgaagatcct gctgctgcac
     4681 caggcgggcg tgccctacgg gttcgacctc atctacgggc tgccggggga cagcctgggc
     4741 ggattccggg aaagcgtgga tttcgccatg ggcctcgtgc ccaaccacct ggatgtcttc
     4801 cgcctctcgg tgcttccggg cacccgcctg gccgaga
//
LOCUS       DASUDT010000426         4363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_240674, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000426 DASUDT010000000
VERSION     DASUDT010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4363
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240674"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFV26_08720"
     CDS             <1..501
                     /locus_tag="VFV26_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846288.1"
                     /translation="QEDEEPRGIGSYSKGAPDAPLFNLLFVDAKTQVSRPLLTRKSLI
                     LRYDILEDREDAKDAQTLGLLVRVVDTDTNKNGRLDAGDDSQVCLCDPLGRNLRVITP
                     AGTVCDNWQFDSARRMVYLLVGPRGESRAAESTEVLMASLDGAQPAQPLVPKAQVDDL
                     RAMLQR"
     gene            complement(492..827)
                     /locus_tag="VFV26_08725"
     CDS             complement(492..827)
                     /locus_tag="VFV26_08725"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEX4846289.1"
                     /translation="MPRHGPVPRCPGRQRRADPGGGVPGLLEEALTWSVYLLQCGDGT
                     LYCGIALDVAARLAQHQAGKGAKYTRGRGPLELVYTEVCASRPAALRRERAIKRMRRE
                     AKQALADQR"
     gene            complement(734..2206)
                     /locus_tag="VFV26_08730"
     CDS             complement(734..2206)
                     /locus_tag="VFV26_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846290.1"
                     /translation="MLLLVAAPSPPFAPPMIEGDVADLPALEEALRVAAAATAAYGPW
                     PAGPWRVRLHGDAAAFEGATGAPPGRSGQWLGDTLHLRPWEQLRRRDLGLVLRHELTH
                     RRLKDAGLRRWSEEARCLWAEGHRRPPDAWPAHPAAALQDRLDRALAGGTTREQAWAY
                     RWLRAWLRREPLPERPAVAKPDRDAWVKEAPPLGATLTVVWPAERWRGPMVVNGQRLS
                     HRPGRSWLFRGQARFGGEAPIQVLEGRVEVRAEARGWRLAWTASEAAWIAAATEGELG
                     ADAHPEAQRALAAVLARWLEGHRRQHPGGVLCPLTHCAVVRGPASAGTLRAASSPPPL
                     DLDARWAFFTGSGGGRPLSPREVWGEGPEASGGAAEVPGDRWLAWERSLPAGQVAALK
                     RDVAPGLKPGQRGLRLGRSGPYAVEALRLAAGRRFGWTALPSNACEGEVQPDGSLALK
                     GRGWGHNVGLCLATARFRAAQGASAGQILAEAFPVSWRKP"
     gene            complement(2206..3036)
                     /locus_tag="VFV26_08735"
     CDS             complement(2206..3036)
                     /locus_tag="VFV26_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846291.1"
                     /translation="MWNPRLLGLLLAFRMLAAQPAPEAGPGPAVMAAYQAPSLRPGEG
                     FAITLGDGGVRAFGEARREAPMGSLAKLAWMRLEGAEWSSAGVRYRCQGTAGSFVCWT
                     REGHGRLDLGRALQESCNLAFLAWIESSRRRWIEEYGPDAARLRMEEAFLPFLGRRLP
                     PGEGLPPLTAAWVGDGDLLRTSPEAFLRWLMDPDRAEVITFGQRFLAGFWVEVKDLFG
                     KEGWWFKTGTAPVPGDPAATSAWVAGGRGPVLVVLHLPRGRGKQEGLARIREILGLKP
                     "
     gene            complement(3023..3871)
                     /locus_tag="VFV26_08740"
     CDS             complement(3023..3871)
                     /locus_tag="VFV26_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846292.1"
                     /translation="MRRLLVLPLLLAASILGAQKAQAPKAAYVPDPKMWRLEVSPALG
                     GWSSDRTVNLRIKLVDPKDPEPPKDEGPARFSFEEEDGEDGPVLEDTRTADQLRRERQ
                     AREAEAARNAWRSRSLQVWFNGATLRWQASVGTTLHTELTAQNGENRLEILEPDSGLK
                     VVRSWWVSTARTRLRVVSLQAGDEYASGSLQVLEPDGALAEGGRRTASGGMLRWSGEY
                     THETPPPGTYTLKWTSGWRGGKPARIKVEALLDGGTDQERRWTWECLILPGAGPVTLG
                     TFDVEP"
     gene            complement(3868..>4363)
                     /locus_tag="VFV26_08745"
     CDS             complement(3868..>4363)
                     /locus_tag="VFV26_08745"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846293.1"
                     /translation="SSALRMSVTRSLWRLKTPQQTGNARQGWVRQPWTGTLKAGEEAW
                     MQVSFRTERDADYAVLEVPIPGGLNPTVKLEGFVLEGRPFTDEGATEVWTKPRIEVHG
                     DKVTFLFQRAWSWDTHTVRILLRAGMAGSYRLRPAKLSLMSNEGQWATCDGAGLKVLD
                     GGVR"
BASE COUNT          618 a         1671 c         1497 g          577 t
ORIGIN      
        1 caggaagacg aggagccccg cggcatcgga agctacagca agggcgcccc cgacgctccg
       61 ttgttcaacc tgctgttcgt ggatgcgaag acccaggtct cccgccccct gctgacccgc
      121 aagagcctca tcctccgcta cgacatcctc gaggaccggg aggatgcgaa agacgcccag
      181 accctcggcc tcctggtgcg tgtcgtggat accgacacca acaagaacgg acgcctggac
      241 gcaggggatg actcccaggt ctgcctctgc gaccccctgg gacgcaacct gcgggtgatc
      301 acgcccgccg gaacggtctg cgacaactgg cagttcgaca gcgcccggcg catggtctac
      361 ctgctcgtcg ggccccgggg cgaatcccgg gcggcggaat ccacggaggt gctcatggcc
      421 tccctggatg gcgcccagcc cgcccagcct ctggtgccca aagcccaggt cgacgacctg
      481 cgggccatgc ttcagcgctg atccgccaga gcctgcttgg cctcccggcg catccgcttg
      541 atggcccgct cccggcgcag cgccgccggc ctgctggcac agacctcggt gtagaccagc
      601 tccagcggcc cccgtccgcg cgtgtacttg gcgcccttcc ccgcctggtg ctgcgccagc
      661 cgggccgcca catccagggc gatgccgcag tagagcgtgc cgtcgccgca ttggaggagg
      721 tagacggacc aggtcagggc ttcctccagg agaccgggaa cgcctccgcc aggatctgcc
      781 cggcgctggc gccctgggca gcgcggaacc gggccgtggc gaggcatagg cccacgttgt
      841 ggccccagcc gcgacccttg agcgccaggg aaccatccgg ctggacctcc ccctcgcagg
      901 cattgctggg caaggccgtc cagccgaagc ggcggcccgc ggccaggcgc aaagcctcca
      961 cggcataggg cccggagcgc cccagccgca ggccccgctg cccgggcttc agtcccggcg
     1021 ccacgtcgcg tttcaatgcg gccacctggc ctgccgggag gctgcgttcc caggccagcc
     1081 agcggtcccc gggcacctcc gcagcgccgc cggacgcttc cgggccctcg ccccagacct
     1141 cccgggggct cagggggcgg ccgccgcccg atcctgtgaa gaaggcccag cgggcatcca
     1201 gatccagcgg tggcggagaa gaagctgccc ggagcgtgcc ggcggaagcc ggcccccgca
     1261 ccacggcgca atgcgtcaag gggcagagga cgccgccggg atgctgccgc cggtggccct
     1321 ccagccagcg ggccagcacg gccgccaggg cccgctgggc ctcgggatgg gcatcggcgc
     1381 ccagctcccc ttccgtggcc gcggcgatcc aggcggcttc ggaggccgtc caggcgaggc
     1441 gccagccgcg ggcttcggcg cgcacctcca cccggccctc caggacctgg attggggctt
     1501 ccccgccgaa gcgcgcctgg ccccggaaca gccagctccg tccgggtcga tgcgacaatc
     1561 gctgtccatt gacaaccatg ggaccccgcc accgctcggc cggccagacc acggtgaggg
     1621 tcgcgccaag aggaggagcc tccttcaccc aggcatctct gtccggcttg gcaacagctg
     1681 gtctctccgg caacggctct cgccgcagcc aggccctcag ccagcggtag gcccaggcct
     1741 gctcccgggt ggtcccaccg gccagggccc ggtccagccg gtcctggagc gcagccgcgg
     1801 gatgcgcggg ccaggcatcc ggggggcgcc ggtggccttc cgcccacagg cagcgggcct
     1861 cctccgacca gcgccgcaga cccgcatcct tcaggcgccg gtgcgtcagc tcgtggcgca
     1921 gcaccaggcc cagatcgcgg cgccgcagct gttcccaggg acgcagatgg agggtatcgc
     1981 ccagccactg gccgctgcgc ccgggaggtg cccccgtggc gccctcgaag gccgcggcgt
     2041 ccccgtgcag gcgcacccgc cagggccccg caggccaggg tccgtaggcc gcggtggcag
     2101 cggccgccac ccgcagggcc tcctccagcg cgggcaggtc cgccacgtca ccttcgatca
     2161 tggggggggc gaagggcggc gagggggccg ccaccagcag cagcatcaag gtttcagccc
     2221 caggatctcc cggatgcggg cgagcccctc ctgcttgccc cgcccccggg gaaggtgcag
     2281 caccacgagg acgggcccgc ggcccccggc cacccaggcg ctggtggccg cgggatcgcc
     2341 cggcaccggg gcggtgccgg tcttgaacca ccagccctcc ttgccgaaga ggtccttcac
     2401 ttcgacccag aagcccgcca ggaatcgctg cccgaaggtg atgacctccg ctctgtccgg
     2461 atccatgagc cagcgcagga aggcctcggg gctggtgcgc agcaggtcgc catcgcccac
     2521 ccaggcggcg gtcaggggcg gcagcccctc gcccggcggc agccggcggc ccaggaaggg
     2581 caggaaggcc tcttccatgc ggagccgcgc cgcatcgggg ccgtattcct cgatccagcg
     2641 cctgcgggag ctttcgatcc aggccaggaa ggccaggttg cagctctcct ggagggcccg
     2701 gcccagatcc agccgaccgt gcccttcgcg ggtccagcag acgaaggaac ccgccgttcc
     2761 ctggcagcgg tacctcaccc cggcgctgga ccattcggca ccctccagcc gcatccaggc
     2821 cagcttggcg aggctgccca tgggcgcctc gcggcgggct tcgccgaaag cgcgcacccc
     2881 accatctccc agggtgatgg caaagccctc gccgggccgg agcgaggggg cctggtaagc
     2941 cgccatcacg gcgggaccgg ggccggcttc cggcgccggc tgggccgcca gcatccggaa
     3001 ggccagcagg aggccgagaa gtctagggtt ccacatcaaa ggtccccagg gtcaccggtc
     3061 cggccccagg caggatgagg cattcccagg tccagcggcg ctcctggtcg gtgccgccgt
     3121 ccagcagggc ctccaccttg atgcgggccg gcttgccgcc ccgccagccg ctggtccatt
     3181 tcagcgtgta ggttccgggc ggcggcgtct cgtgggtgta ttcgccggac cagcgcagca
     3241 tgcccccgga ggccgtgcgg cggcccccct cggccagcgc cccgtcgggc tccagcacct
     3301 ggaggctgcc gctggcgtac tcgtcgccgg cctggaggga gaccacgcga agcctggtcc
     3361 gtgccgtcga cacccaccag ctgcggacga ccttcagccc cgaatccggc tccaggatct
     3421 ccaggcggtt ctcgccgttc tgggccgtga gctccgtgtg gagcgtggtg cccacgctgg
     3481 cctgccagcg cagcgtggcg ccgttgaacc acacctggag gctgcgcgac cgccaggcgt
     3541 tgcgggcagc ctccgcctcc cgggcctgcc gctcccggcg cagctggtcc gccgtgcggg
     3601 tgtcctccag gaccgggcca tcctccccgt cctcttcttc gaaggagaac cgggcaggcc
     3661 cctcgtcctt gggcggctcc ggatccttgg ggtccaccag cttgatcctc aggttcaccg
     3721 tgcggtcgct ggaccagccg cccagggccg gcgatacctc cagccgccac attttgggat
     3781 cgggcacata ggcagccttg ggcgcctggg ccttctgcgc gcccaggatg gaggccgcca
     3841 gcaggagggg cagaaccagc aggcgcctca tcgcacacct ccatccagca ctttcaggcc
     3901 ggcgccatcg caggtggccc actgcccctc gttcgacatg aggctcagct tcgcggggcg
     3961 gagccggtag ctccccgcca tgccggcccg cagcaggatc ctcaccgtgt gggtgtccca
     4021 gctccaggcg cgctggaaga ggaacgtgac cttgtcgccg tgcacctcga tgcggggctt
     4081 tgtccagacc tccgtggccc cttcatccgt gaagggcctc ccctccagca cgaaaccctc
     4141 cagcttcacg gtggggttga ggccgcccgg aatgggcacc tccagcacgg cgtagtcggc
     4201 gtcgcgctcg gtgcggaagg acacctgcat ccaggcctcc tcgccggcct tcagcgtgcc
     4261 cgtccagggc tggcgcaccc agccctggcg ggcgttccca gtctgctgag gggtcttcag
     4321 gcgccagagg ctgcgggtca cggacatgcg cagggccgag gag
//
LOCUS       DASUDT010000427         6416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1963519, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000427 DASUDT010000000
VERSION     DASUDT010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6416
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963519"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VFV26_08750"
     CDS             complement(<1..878)
                     /locus_tag="VFV26_08750"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX4846294.1"
                     /translation="MIGTPCQRAALALLTAIPGWAETPPAVQPAIQVIQPISFGGLLV
                     SPRGGSITLTADGVLVPDGPGIQPGATPPAEAARFRLTGPPGARFSLQVDPRVPMLTS
                     PQGGQVRLVQFDPAMDASGTFDSLGAAEFKLGGRLEVGAGTQPGWFRAAQVKLQLNVA
                     DVRGTGTVNASFSISALIRAPLRLINHSPLSFGGLIPGDGPGTFEVLAGGGHQSRETG
                     GPILVKGEPSPAAFFLQGPEGVPYTIQLPTRIILTGPGAPLLVEDLTCSTPLVGTLPP
                     GGLPFGVGGRLGVPPG"
     gene            complement(875..3574)
                     /locus_tag="VFV26_08755"
     CDS             complement(875..3574)
                     /locus_tag="VFV26_08755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846295.1"
                     /translation="MRIRGILAIPPLAVGAVALPPGPPSPPLDEAEAMLIQPFLGRIP
                     LADAISAHPTPGGALVPLGEVCRLLAFGILVDADRGTAAGFFITEKRRFSLDLARGTV
                     ESDGRKSALLPQQAIRQGQDIYVEARLLQDWFPLEAAVDLRAAVLLLKPKEKLPIQEI
                     WERERAYGPGGPGGFSPDPDAHLPGAFLPTPYRAFTLPFVDLSASWSRNRATGSTAPQ
                     ASAFLGGDLLWMSMNAYGTRDPDGRIRNARGTLFREDPHGGLLGPLQARRLSLGDLPQ
                     APALNISGALPRGRGALLDNYPIGYRSKFATRSFQGPLPDGWSVELFHNRSLVAFQRS
                     RPDGRYQFQDLPLRFGLNQFRLVFHGPMGERREETYRMDIAGEQPPPGAFYYRVAALR
                     PDLDASTLDPDQVPDPRALQRTASFAEVEYGLASFLSANAGYTRIALPTGMHDYTEAG
                     LRGMFSFLSVQANAAQDRSPGRTAGLAAEGVVRTGWDYSTLTLRRSEYRRGFQRADFL
                     VSGGGLQNLRTETAAELYGSLTLGGLPFSATLSRVADEFTTGHWTARERMQVSATFGR
                     INLSQSLQRTLDSRRRGTAPLDGTLILSAFSNAVVAQGELTFRREAGHTEVTGWGASG
                     DYRSSGGTLVRLLVKGTSGSMKDATVVGTLSRMTGHLGYGVDVHYARASGATLGLRLQ
                     VSFGREPRTGRWVAAAQPMAALGAVSARAFMDRNANGTLDPGETVIPASRFKSAEAPV
                     ESRIQDGTVTFQTHLPAGQEIPIRLDPTSLDDPALQSTVKAYRIVPRSGRVALLDFPV
                     ATFGEITGTTRIRRPEGTADYGGLELELLKATGEPARRIRSAYDGFFEIRDLPIGEYL
                     LRIPPGELRRLRLKDIAPRRILIDAERNLFEGQDFTVEPEVKP"
     gene            complement(3593..4471)
                     /locus_tag="VFV26_08760"
     CDS             complement(3593..4471)
                     /locus_tag="VFV26_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HEX4846296.1"
                     /translation="MPPCRLLSPVLSGLLACLPLSAQPPTQPPDSRKGLGQGAGDLMI
                     LPTRIILEGRVRASEVMLKNQGKTTATFRIFIKEMEMTPDGRLQDRAKAPGETTAADL
                     VRFTPRQAELAPGEAQTVRIQLRKPGALPDGEYRSHLVFQGIPPAEPPQPEGADGEKK
                     LTITIRPVYGISIPIIVRHGETRASLSLGNPRFRPPQAEGAPPAVLVDLERQGNRSVM
                     GDFEVAVEAGGSLKKGTLVAVAKGIAVYHTLPAREVALPLQLEKGASIQGARLKVSFI
                     PQDIKLPPVVAHLVAP"
     gene            complement(4565..5101)
                     /locus_tag="VFV26_08765"
     CDS             complement(4565..5101)
                     /locus_tag="VFV26_08765"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX4846297.1"
                     /translation="MRIPTSLCVLALCGWALADGNQSLASANAGVIIWPPITLVKSQD
                     LWFGEIILDSAFSGGLIEQNAAKGGGTREPDVPGLLSVQKRYDRWHNAEFEVTGAPGS
                     GFSLVLPQYNTVFITNPSTGAAIPIQLGVPEFDAYVPNAIGLTGRTRIWVGGKLILPA
                     APPPGYYSGQFLITVAYN"
     gene            complement(5160..5690)
                     /locus_tag="VFV26_08770"
     CDS             complement(5160..5690)
                     /locus_tag="VFV26_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846298.1"
                     /translation="MRTFLTLALVAGSTALFADGNTATTSAEAAVRIYSPIGIYNVFG
                     DKLDFAQIVINDVTKPASVVMPATYYPTLQDFDNCAVKNGSPAASAAWFHVNRDTTLT
                     YTLGIDPIVDLGDGVKITTSHSGLTPCSVAPTPMATYALPGTTQEHFYVGGKLEVPAF
                     VIGHKTGTLNVSVSYN"
     gene            complement(6037..>6416)
                     /locus_tag="VFV26_08775"
     CDS             complement(6037..>6416)
                     /locus_tag="VFV26_08775"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4846299.1"
                     /translation="YLVKPFCPELLVASVRAVLRRCSSLVQDILSRGDLRMELLTMKV
                     FKAGVEVDLTPREFTLLSAFLRHPGEVMTRDQLCGQVWGENHHGCPKALDVFLCKLRE
                     KLEDDPAHPRHFRTERGVGYVFE"
BASE COUNT          988 a         2011 c         2418 g          999 t
ORIGIN      
        1 tgcccagggg gcacgccgag ccgtccgccc acgccgaagg gaaggccccc ggggggcagg
       61 gtgccgacga gcggcgtgct gcaggtgagg tcctccacca gcaggggtgc ccccggcccc
      121 gtcaggatga tccgggtggg aagctggatg gtgtagggga cgccttcggg tccctgaagg
      181 aagaaggcgg cgggtgaggg ctcccccttg accaggatcg gcccgccagt ctccctggac
      241 tgatgccctc cgccggccag cacctcgaag gtgccgggcc cgtctccggg aatcaggccg
      301 ccgaaggaca gggggctgtg gttgatgagg cgcaggggcg cgcggatcaa ggcggagatg
      361 gagaaggagg cattcacggt tcccgtcccg cgcacgtccg ccacgttcag ctggagcttc
      421 acctgggcgg cccggaacca cccgggctgg gtgccggcgc ccacctcgag gcggcccccg
      481 agcttgaatt cggcggcgcc gaggctgtcg aaggtcccgg aggcatccat ggccggatcg
      541 aactggacca ggcgcacctg cccgccctgg gggctggtga gcatgggaac cctgggatcc
      601 acctgcaggc tgaacctcgc tcccggaggg ccggtcaggc ggaaccgggc ggcctcggcg
      661 ggcggggtgg ccccgggctg gatgcccggc ccgtcgggca cgaggacccc atcggccgtg
      721 agcgtgatgc tgcctccccg gggactcacc agcaggccgc cgaaggagat gggctggatc
      781 acctggatgg ccggctgcac ggcggggggt gtctcggccc acccgggaat ggccgtaagc
      841 agggcgaggg ccgccctctg gcaaggggtt ccgatcatgg cttcacctcc ggttccacgg
      901 tgaaatcctg gccttcgaag aggtttcttt cggcgtcgat gaggatcctg cgcggcgcga
      961 tgtccttgag cctcaggcgg cggagctccc ccggggggat gcggagcagg tactcgccaa
     1021 tcgggaggtc ccggatctcg aagaagccgt cgtaggcgct cctgatccgg cgcgccggtt
     1081 cgccggtggc cttgaggagc tcgagttcga gcccgccgta atccgcggtg ccctcgggac
     1141 ggcggatccg cgtggtgccg gtgatctcgc cgaaggtggc gacggggaaa tcgaggaggg
     1201 ccacccgccc ggacctgggc acgatccggt aggccttgac cgtggattgc agcgccgggt
     1261 catcgaggct cgtggggtcc aggcggatgg ggatctcctg gcccgccggc aggtgggtct
     1321 ggaacgtgac ggtgccgtcc tggatgcggc tctccacggg ggcctcggcg gacttgaacc
     1381 ggctggcggg gatcaccgtt tcacccggat ccagggtccc gttggcgttc cggtccatga
     1441 aggccctggc ggacacggcc ccgagggctg ccatgggctg ggctgcggcc acccagcgcc
     1501 ccgtgcgcgg ctcccgtccg aaggacacct ggagcctgag gccgagggtg gccccggagg
     1561 ccctggcgta gtggacatcc acgccgtagc cgagatgccc ggtcatgcgg ctgagggtgc
     1621 ccaccaccgt cgcgtccttc atggacccgc tggttccctt caccagcagg cggacgaggg
     1681 tccctccgct ggaccggtag tcccccgagg ccccccatcc cgtgacttcg gtgtgccctg
     1741 cttcccggcg gaaggtgagc tccccctggg ccaccacggc attggaaaag gcgctgagga
     1801 tcagggtgcc atcgaggggc gcggtccccc tccgccggga atccagcgtg cgctgaagag
     1861 actgggagag gttgatccgg ccgaaggttg ccgagacctg catccgctcg cgggcggtcc
     1921 agtggcccgt ggtgaattcg tctgccaccc gcgagagggt ggcgctgaag ggaagcccac
     1981 ccagggtgag ggatccgtag agctcggcgg ccgtctccgt gcggaggttc tgcaggcccc
     2041 ctccggagac gaggaagtcc gcccgctgga atccccgccg gtactccgag cggcggaggg
     2101 tgagggtgga gtagtcccat cccgtgcgga ccacaccctc cgccgccaac cccgccgtcc
     2161 ggccggggct ccggtcctgg gccgcgttgg cctgcaccga caggaaggag aacatgcccc
     2221 ggaggccggc ctcggtgtag tcgtgcatgc cggtcgggag ggcgatcctg gtgtacccgg
     2281 cgttcgcgga caggaaggag gcgaggccgt attccacttc cgcgaagctg gcggtccgtt
     2341 ggagcgcccg gggatccggc acctggtccg gatccagggt ggacgcgtcg aggtcgggcc
     2401 ggagggccgc cacccggtag tagaaggccc cggggggcgg ctgctcgccg gcgatgtcca
     2461 tgcggtaggt ctcctcccgg cgctcgccca tgggaccgtg gaagacgagg cggaactggt
     2521 tcaggccgaa gcgcagcggg aggtcctgga actggtaccg gccatcgggg cgggaacgct
     2581 ggaaggccac cagggagcgg ttgtggaaca gctccaccga ccatccgtcg ggaaggggcc
     2641 cctggaagga ccgggtggcg aacttcgacc ggtagccgat ggggtagttg tcgaggagcg
     2701 ccccccggcc ccggggcagg gcaccactga tgttcagggc gggggcctgg ggcaggtcgc
     2761 ccaggctcag gcgccgcgcc tggaggggcc ccagcaggcc cccgtgggga tcctcccgga
     2821 agagcgtccc ccgggcgttc cggatccggc catcgggatc ccttgtgccg taggcgttca
     2881 tgctcatcca gagcaggtcg cccccaagga aggccgaggc ctggggggcc gtggaaccgg
     2941 tggcgcggtt ccgcgaccag gaggcggaga gatccacgaa gggcagggtg aaagcccggt
     3001 agggggtcgg caggaatgca ccggggaggt gggcgtccgg atcggggctg aagccgcctg
     3061 ggcctccggg gccgtaggcg cgctcccgct cccagatctc ctggatgggc agcttctcct
     3121 tcggtttgag gaggaggacc gcggcccgca gatccaccgc cgcctccagc gggaaccagt
     3181 cctgcaggag ccgggcctcc acgtagatgt cctgcccctg gcggatcgcc tgctggggca
     3241 ggagcgcgct cttgcgtccg tcggattcca cggttccccg ggccaggtcc agggagaagc
     3301 gccgcttctc ggtgatgaag aagcccgcgg ccgtgccccg gtccgcgtcc accaggatgc
     3361 cgaaggccag gagccggcag acctccccca ggggcaccag ggctccgccc ggggtgggat
     3421 gggcgctgat ggcgtccgcg agggggatcc ttcccaggaa cggctggatc agcatcgcct
     3481 cggcctcatc gaggggcggg gacggcggcc ccgggggcag agccacggcc cccacggcaa
     3541 gcgggggtat cgccagaatc ccgcggatgc gcaagcggcc ctcctggggc ggtcaggggg
     3601 ccacgaggtg ggccacgacg ggaggaagct tgatgtcctg ggggatgaag gagaccttca
     3661 gccgggcgcc ctggatggaa gcgcccttct ccagctggag gggcagggcg acctcccggg
     3721 cggggagggt gtggtagacc gcgatcccct tggccacggc gaccagcgtg cccttcttca
     3781 ggctgcctcc ggcttcgacc gcgacctcga aatcgcccat cacgctgcgg tttccctggc
     3841 gctccaggtc caccagcacg gccggggggg cgccttccgc ctgagggggg cggaacctgg
     3901 ggttcccgag gctgaggctg gcgcgggtct ccccgtggcg gacgatgatc gggatggaga
     3961 tgccgtagac cgggcggatg gtgatggtga gcttcttctc gccgtcggcg ccttcgggct
     4021 ggggcggttc cgcgggcggg atcccctgga agacgagatg ggaacggtac tcaccgtccg
     4081 gcagggctcc cggcttcctg agctggatgc ggacggtctg ggcctcgccg ggcgccagct
     4141 cggcctggcg gggggtgaag cgcaccaggt ccgccgccgt cgtctccccc ggtgccttgg
     4201 cgcggtcctg gagccgtccg tccggggtca tctccatctc tttgatgaag atccggaagg
     4261 tggctgtcgt ctttccctgg ttcttcagca tcacttcgct cgcccggacc cggccttcca
     4321 ggatgatccg cgtggggagg atcatcaggt cgcccgcgcc ctggccgagg cccttgcggg
     4381 agtcgggcgg ctgggtgggc ggctgggcag acagcgggag gcaggcgaga aggcccgaga
     4441 ggactgggga cagcaggcgg catgggggca tgggattcga ctccggatgg gggccttcat
     4501 gccggaaggg gctgcgcccg ccatgcgggg cagccccttg accgggtgga acgggaggcg
     4561 ggcatcagtt gtaggcgacg gtgatcaaga attggcctga gtagtacccg gggggcggcg
     4621 cggcagggag gatgagcttg ccacccaccc agatccgggt ccgccctgtg aggccgatgg
     4681 cgttgggcac ataggcgtcg aattccggaa cgcccagctg gatcggaatg gctgcgccgg
     4741 tggaggggtt ggtgatgaac accgtgttgt actgcggaag aaccaggctg aacccggagc
     4801 cgggggcccc ggtcacctcg aattccgcgt tgtgccagcg gtcgtagcgc ttctggaccg
     4861 agagcaggcc ggggacatcg ggttcgcggg tgccaccccc cttggcggcg ttctgctcga
     4921 tcaggccacc gctgaaggcc gaatcgagga tgatctcgcc gaaccagagg tcctggctct
     4981 tcaccagggt gatgggcggc cagatgatga cgccggcgtt cgcggacgcg agggactggt
     5041 tcccgtctgc cagtgcccag ccgcagaggg ccagcacgca taggctggtg ggtatcctca
     5101 tgggaatcct ccggatcccg ggagggggcg caacccccct ccccggatcg ctccgcgggc
     5161 tagttgtagg agacgctgac gttcagcgtg cccgtcttgt ggccgatgac aaaggcaggc
     5221 acctccagct tgccgcccac atagaagtgc tcctgggtgg tgccgggaag ggcgtaggtc
     5281 gccatgggcg tcggggccac ggagcagggg gtcaggccgc tgtgggacgt ggtgatcttc
     5341 acgccatcgc ccaagtccac gatcggatcg attccgaggg tgtaggtcag ggtggtgtcg
     5401 cggttgacat ggaaccaggc ggcgcttgcc gccgggcttc cgttcttcac ggcgcagttg
     5461 tcgaagtcct gcagggtggg gtagtaggtg gcgggcatga ccaccgaggc cggcttcgtg
     5521 acgtcgttga tgacgatctg ggcgaagtcc agcttgtcgc cgaacacgtt gtagatgccg
     5581 atcggggagt agatcctcac ggcggcttcg gccgaggtcg tcgcggtgtt gccatcggcg
     5641 aacaaagccg tcgaacccgc caccagggca agggtaagga acgtgcgcat ggctgctcca
     5701 tctggctagc gctggggagg gcttgtggtt cctccccaga cgatgtttgg gggaacccgg
     5761 aggcccggtg aagggcatcc agggaaagac aggcctcctg caggcgcatt cccgggttca
     5821 tgcggatgcc gtggccctga gtagctgctt cgagcatccc tgacgggaca agctctggcc
     5881 gctttaatgt cgatcaacat gggcccggca gggggtgata caaggttcta aatggttaaa
     5941 atttattaaa agtattaaat ttagtaacaa tgggaataac atttgccggg aggtttgggg
     6001 gcatggaatc cggaattcgg aatggattca gccctgttat tcgaagacat atccgacccc
     6061 ccgctcggtc ctgaagtgcc tgggatgggc gggatcgtcc tcgagcttct cccgcagctt
     6121 gcagaggaag acatcgagcg ccttcgggca gccgtggtga ttctcccccc agacctggcc
     6181 gcaaagctgg tcccgcgtca tcacttcccc agggtgccgg aggaacgcgc tcagcagggt
     6241 gaactcccgg ggggtgagat cgacctccac accggccttg aacaccttca tggtgaggag
     6301 ctccatgcgg agatcccccc gcgaaaggat gtcctggacc aggcttgagc atcggcggag
     6361 gacggcccgg acactcgcca ccaggagttc ggggcagaag ggcttgacca gatagc
//
LOCUS       DASUDT010000428         3076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_461936, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000428 DASUDT010000000
VERSION     DASUDT010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461936"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VFV26_08780"
     CDS             <1..754
                     /locus_tag="VFV26_08780"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX4846300.1"
                     /translation="SLRTAAKKEGSHYVLNGTKTFITHGTVGDIFVVMARTRPPQPGH
                     SSADGISAFVLEKGMNGFRAGKQENKLGLRASDTSELIMEDVKVPEANLLGEDGVGFK
                     QAMKTLDGGRISIGALGLGMAQGAFEEALRYSKIRHTFGKPLADHQGIQFKLADMGTE
                     IEAARLLIYRAAALKDQGLPYAKAASMAKLYSSEVACRVADQAVQILGGYGYIKDYPV
                     EKYYRDVKLCTIGEGTSEIQRTVIARYLLSEY"
     gene            866..2872
                     /locus_tag="VFV26_08785"
     CDS             866..2872
                     /locus_tag="VFV26_08785"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX4846301.1"
                     /translation="MKPQILLLAAALPLLASRPLQVDDLFKVKRVTDPQLSTTGALAY
                     QVGTVDFAGNKTLTRIWFKAPGGEAKELDLGAGTQSRPRLSPDGQRLAYQSGGQVWIV
                     DLGTKEKRQLTKLSGGASAHSWSPDGKWIAFLSTTVPSGNEAENAAYLKAREASKVSG
                     KVFDTLMYRHWNEWKDPKQVSHLFVVPSDGSAEPRDLTAGLATDVPIFAGVSAGDGYA
                     WAPDSRALAFDSHPEQLKGVSTNGEIYEVALSGGPAKKLSDNPAMDNSPAYSPDGKHL
                     AWRAQRRPGFEADKWELWVMDRATGKVVRTTQAFDQSFGDYQWQGQDLVGVCDRQGHA
                     DLFCWDGKTLQPLSHNLHIEGFALAKDQAVVVSTSLTTPQDLYTVDFKTGKVVRATKH
                     NEGLATELGLNKGEDLWVDTLPVEGKATKTHAFIVKPVGYDPAKTYPVAFVIHGGPQG
                     AWANAWHPRWNAQAWASRGFLTVLPNPRGSTGFGQAYTDAISGDWNGAVMTDLMNTLD
                     AVLKQFPNADPKRVVACGGSYGGYAVNWIAGHYPERFAGFVTHASIFNTESMQLGTEE
                     LWFPHWEFKGWPWESAETKARWQSQSPSSAIAKMTKPMLVIHGELDYRVPVTEAFQLY
                     NTLQVRGIPSRLLYFPDEAHFVAKPQNSKLWYETVLGWCERWTK"
BASE COUNT          572 a         1121 c          965 g          418 t
ORIGIN      
        1 ctcgctccgc accgccgcga agaaggaggg ctcccactac gtcctgaacg gcaccaagac
       61 cttcatcacc cacggcaccg tgggcgacat cttcgtggtg atggcccgca cgcgcccgcc
      121 ccagcccggc cacagcagcg ccgatggcat cagcgccttc gtgctggaga agggcatgaa
      181 cggcttccgg gccggcaagc aggagaacaa gctgggcctg cgggccagcg atacctccga
      241 gctgatcatg gaggacgtga aggtgcccga ggccaacctc ctgggcgagg acggcgtggg
      301 cttcaagcag gccatgaaga ccctggacgg cggccgcatc agcatcgggg ccctgggcct
      361 cggcatggcc cagggcgcct tcgaggaggc cctgcgctac agcaagatcc gccacacctt
      421 cggcaaaccc ctggccgatc accagggcat ccagttcaag ctggcggaca tgggcacgga
      481 gatcgaggcg gcccgcctgc tcatctaccg cgccgccgcc ctgaaggacc agggcctgcc
      541 ctacgccaag gccgccagca tggccaagct ctacagctcc gaggtggcct gccgcgtggc
      601 ggaccaggcc gtgcagatcc tcggcggcta cggctacatc aaggactacc cggtggagaa
      661 gtactaccgg gacgtgaagc tctgcaccat cggcgaaggc accagcgaga tccagcgcac
      721 cgtgatcgcc cggtacctcc tctccgaata ctgacataaa cgagggggga ccgcccggcc
      781 gctcgcgtcc tctgcgtccc ccctcgtgca cccccacgcc gtgtccagac gaagtccggc
      841 caccgcgtct gatcccggag cccccatgaa accccagatc ctccttctcg cggcagccct
      901 gcccctgctg gccagccgcc cccttcaggt ggatgacctg ttcaaggtca agcgcgtcac
      961 cgatccccag ctgtccacca ccggcgccct ggcctaccag gtgggcaccg tggacttcgc
     1021 gggcaacaag accctcacgc gcatctggtt caaagccccg ggcggcgagg cgaaggaact
     1081 cgacctcggc gccggcaccc agtcccgccc ccggctgagc cccgatgggc agcgcctggc
     1141 ctaccagtcc ggcggccagg tgtggatcgt ggacctgggc accaaggaga agcgccagct
     1201 cacgaagctc agcggcgggg cctccgccca tagctggagc cccgacggca agtggatcgc
     1261 cttcctcagc accaccgtgc ccagcgggaa cgaggccgag aacgccgcct acctcaaggc
     1321 cagggaggcc agcaaggtca gcgggaaggt cttcgacacc ctgatgtacc gccactggaa
     1381 cgagtggaag gatccgaagc aggtgagcca cctcttcgtg gtgcccagtg acggcagcgc
     1441 cgaaccgcgg gacctcaccg cgggcctcgc cacggacgtg cccatcttcg ccggtgtctc
     1501 cgcgggcgac ggctacgcct gggcccccga cagccgggcc ctggccttcg actcccatcc
     1561 cgagcagctc aagggcgtca gcaccaacgg cgagatctac gaggtggcgc tctccggcgg
     1621 ccccgcgaag aagctcagcg acaacccggc catggacaac tccccggcct attcgccgga
     1681 cgggaagcac ctggcctggc gggcccagcg ccgccccggc ttcgaggccg acaagtggga
     1741 gctctgggtc atggatcgcg ccacgggcaa ggtcgtgcgc accacccagg ccttcgacca
     1801 gagcttcggc gactaccagt ggcagggcca ggatctggtg ggtgtctgcg accgccaggg
     1861 ccacgcggac ctcttctgct gggatgggaa gaccctccag cccctcagcc acaacctgca
     1921 catcgaaggg ttcgcgctgg ccaaggacca ggccgtggtg gtctccacca gcctcaccac
     1981 gccccaggac ctctacacgg tcgacttcaa gactggcaag gtggtccgcg ccacgaagca
     2041 caacgaaggc ctcgccacgg agctcggcct gaacaagggc gaggacctct gggtggacac
     2101 cctgcccgtg gagggcaagg ccaccaagac ccacgccttc atcgtgaagc ccgtgggcta
     2161 cgatcccgcc aagacctacc ccgtggcctt cgtcatccac ggcggccccc agggtgcctg
     2221 ggccaacgcc tggcaccccc ggtggaacgc ccaggcctgg gccagccgcg gcttcctcac
     2281 cgtgctgccc aacccccgcg ggtcgacggg cttcggccag gcctacacgg acgccatcag
     2341 cggtgactgg aacggcgccg tcatgaccga cctgatgaac accctggatg ccgtgctcaa
     2401 gcagttcccc aacgccgatc ccaagcgcgt ggtggcctgc ggcggcagct acggcggcta
     2461 cgccgtgaac tggatcgccg ggcactaccc ggagcggttt gcgggcttcg tgacccacgc
     2521 cagcatcttc aacaccgagt ccatgcagct gggcaccgag gagctctggt tcccccactg
     2581 ggaattcaag ggctggccct gggagagcgc cgagaccaag gcccgctggc agtcccagag
     2641 ccccagcagc gccatcgcca agatgaccaa gcccatgctg gtcatccacg gcgaactgga
     2701 ctaccgcgtg cccgtcaccg aggccttcca gctctacaac accctgcagg tgcgcggcat
     2761 ccccagccgg ctgctctact tccccgacga ggcccacttc gtggccaagc cccagaacag
     2821 caagctctgg tacgagaccg tgctggggtg gtgcgagcgc tggacgaagt aaaagcagga
     2881 ctgattttct aaccgcagat gtcgcagatt cacgcagatg aaaagcaggc tttatctgcg
     2941 gccatctgcg ccatctgcgg ttaaatgctt ctctctattg gaatcacccc gccacaggcc
     3001 ccgggatcgg acaacgcgcg ccagggttcg aggacgaagg ggcggctgaa ggcgcggggg
     3061 tggggcagct ccaacg
//
LOCUS       DASUDT010000429         2214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1168777, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000429 DASUDT010000000
VERSION     DASUDT010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1168777"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VFV26_08790"
     CDS             complement(<1..955)
                     /locus_tag="VFV26_08790"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEX4846302.1"
                     /translation="MPASAPVPRLASFLLLLGGALALAPFTPAAAALAGGAVLALTVG
                     NPRLALTRTWTHRLLPLAVIGLGADMNLRAVARAGLHGLGYTALSLALVLALGLGLAR
                     LLKVDRETGLLISVGTAICGGSAIAAVAPVIRAKDHGISVALATVFLLNAAALVVFPP
                     LGHAAGLGQEAFGLWSALAIHDTSSVVGAGLAYGPRALEVATTVKLARALWIVPLTLG
                     LGWFMARREPASADAPPLKKPWFIAGFLAMAALVTFVPALQVPGHWIAVAARRVLVLT
                     LFLIGAGLSREALKNVGLRPFLQGLLLWLIVGSLGLGAVKLG"
     gene            978..2192
                     /locus_tag="VFV26_08795"
     CDS             978..2192
                     /locus_tag="VFV26_08795"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4846303.1"
                     /translation="MTPQLIPTRRAFPADDPIFALNAEAQARKAKGESILNATVGALL
                     DEAGQLVVLDVVMDLWRSLGALEVAPYAPIAGDPAFLKALVQRHWPSLESAGAACATP
                     GGSGALTLSLRNFLEPGQTLLTTAPFWGPYATLAAENGMRLATAPWPAAGAPLDAAAW
                     DAALRGLMQAQGRVMVWLNDPCHNPTGRSLGAGDRAALLGLLRELSALGPVTLLLDLA
                     YLDYTREPEAVASAMRDYAALGAEGRVLVGAALSLSKSMTLYGARGGALAFPWCDDPV
                     LQAALTQSCRGTWSNCPRAPQSLMLRLAQDGKAQARLAAEHRHWSEVLAARALALDAA
                     LEAEGMEALQWQGGFFVTVPSASPTAACEDLKAEGVFTVPLPEGLRVGLCGLRAEEAP
                     RFARALRKVAVR"
BASE COUNT          316 a          794 c          835 g          269 t
ORIGIN      
        1 accccagctt cacggccccc agccccagcg aacccacgat aagccacagc agcagcccct
       61 ggaggaaggg ccgcagaccc acattcttga gcgcctcgcg gctgaggccc gcgccgatga
      121 ggaagagggt cagcaccagc acccggcggg ccgccacggc aatccagtgc cccggcacct
      181 gcagggccgg gacgaaggtg acgagggccg ccatggcgag aaaccccgcg atgaaccagg
      241 gcttcttcag gggcggcgca tcggctgacg ccggttcccg ccgggccatg aaccagccga
      301 ggcccagggt gaggggcacg atccacaggg cccgggcgag cttcacggtg gtggcgacct
      361 ccagcgcccg ggggccgtag gcaagccccg cgcccacgac cgagctggtg tcgtggatgg
      421 ccagggccga ccagaggccg aaggcctcct ggcccaagcc cgcggcatgg cccaggggcg
      481 ggaagaccac cagggccgcg gcgttgagga ggaacaccgt ggccagggcc acagaaatcc
      541 cgtggtcctt ggcgcggatc accggtgcca cggcggcgat ggcgctgccg ccgcagatgg
      601 cggtgcccac ggagatgagc aggcccgtct cgcgatccac tttcaggagc cgcgccagtc
      661 cgaggcccag ggccaggacc agcgccaggc tcagggcggt gtagcccagg ccgtgcaggc
      721 ccgccctggc cacggcccgc aggttcatgt ccgcgcccag gccgatgacg gccaggggca
      781 gcaggcggtg ggtccaggtc cgggtgaggg cgagccgggg attccccacc gtgagggcga
      841 ggaccgcgcc gcccgccaaa gccgccgccg cgggagtgaa gggtgccagg gccagggcgc
      901 cgccgagcag cagcaagaac gacgcgaggc gggggacggg cgcggacgca ggcatggctt
      961 cagagtaccc tggggccatg actccccagc tcatccccac ccggcgcgcc ttcccggcgg
     1021 acgatcccat cttcgccttg aatgcggagg cccaggcccg gaaggcgaag ggggaatcca
     1081 tcctcaacgc caccgtgggc gcgctgctgg acgaggcggg ccagctggtg gtgctggatg
     1141 tggtgatgga cctgtggcgc agcctgggcg ccctggaggt ggccccctac gcccccatcg
     1201 caggcgatcc cgccttcctg aaggcgctgg tgcagcgcca ttggccctcg ctggaatcgg
     1261 ccggggccgc ctgcgcgacg cctggcggca gcggggccct gacgctctcc ctgcgcaatt
     1321 tcctggaacc cggccagacc ctgctcacca cggcaccctt ctgggggccc tacgccaccc
     1381 tcgccgccga aaacggcatg cgcctggcca cggcgccctg gcccgcggcg ggagccccgc
     1441 tggacgcggc cgcctgggac gcggcgctgc ggggcctgat gcaggcccag ggccgcgtga
     1501 tggtctggct caacgacccc tgccacaacc ccacgggccg cagcctcggc gcgggggacc
     1561 gtgcggcgct gctggggctg ctgcgcgagc tgtcggccct gggcccggtc acgctgctgc
     1621 tggacctggc ctacctggac tacacccggg agccggaggc cgtggcctcg gccatgaggg
     1681 actacgcggc cctgggggcc gagggccggg tgctggtggg tgccgccctg tccctgtcca
     1741 agtccatgac gctgtatggc gcccgtggtg gcgccctggc gttcccgtgg tgtgacgacc
     1801 cggtcctgca ggcggccctg acgcagtcct gccggggtac ctggtccaac tgcccccggg
     1861 cgccccagtc gttgatgctg cggctggcgc aggatggcaa ggcccaggcg cggctggccg
     1921 ccgaacaccg gcactggtcc gaggtgctgg cggcacgggc cctggccctg gacgcggccc
     1981 tggaagcgga gggcatggag gctctgcagt ggcagggcgg gttcttcgtc acggtgccgt
     2041 cggcctcccc caccgcggcc tgtgaagacc tgaaggccga aggcgtgttc acggtgccgc
     2101 tgcccgaagg actgcgcgtg ggcctctgcg ggttgcgggc ggaggaggcg ccgcgcttcg
     2161 cccgggccct tcggaaggtg gccgtccggt gattcgggct tggacaggag cccc
//
LOCUS       DASUDT010000430         3732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_616785, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000430 DASUDT010000000
VERSION     DASUDT010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616785"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1211)
                     /locus_tag="VFV26_08800"
     CDS             complement(72..1211)
                     /locus_tag="VFV26_08800"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEX4846304.1"
                     /translation="MIPSPWRQRLQQHAERRRTLGRDRAIRPAAGVDFCSNDYLGLRR
                     DPRLAEAAAAAAREHGSGAGGARLLRGTTALHEELEAALAAWKGTEACLLFNTGFQAN
                     ATLIPALAGAGDAVFSDALNHASLVDGCRLARAGGAHLGIYRHLDLADLETQLAAWRG
                     TAPDGALSLVATDAVFSMDGDAADLPALLDLCHRHGALLLVDEAHATGLLGADGAGLA
                     QLQGVHGRVPLVMGTLGKALGAFGAFVCGEALLREHLLNTARGFIFSTALPPPVLGAA
                     LEGVRIAQAEPWRRERALAFAGRLREALEQPSQPSAIVPVPVGPDALAVDLAARLQAR
                     GFDVRAVRPPTVPEGSARLRITTGAHLAWDQIEALASALRGPWKD"
     gene            1301..1981
                     /locus_tag="VFV26_08805"
     CDS             1301..1981
                     /locus_tag="VFV26_08805"
                     /inference="COORDINATES: protein motif:HMM:NF013214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEX4846305.1"
                     /translation="MDYQQSWQGASTGAQSRVDFVRSVYLWLMGGFAVAALGALSAPF
                     IAQALIPVAGRFLGWVLFGVQFGTLLFASSVSRRKPLNRLAYGLFTFVSGVIAGILAL
                     VIARGAGFTPVFTAFGLTGVVFLTLTVTAFVSKKDFSFLRNFVIVGIAVMFFGGLAAA
                     IFQLETFGLIISGVAVIACSAKLLWDTSTMLRTDDFGDPAGFALSLFVSLYNIFISLM
                     NLLGGRRR"
     gene            2008..3003
                     /locus_tag="VFV26_08810"
     CDS             2008..3003
                     /locus_tag="VFV26_08810"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4846306.1"
                     /translation="MLRASLISLIALGVVAQEPAQAPAAAPVQAPVQAPAPKPEEVVL
                     AKVGGEPITEADFQSAFRLLGQQEQMQILMVQGGKEEFVKRMAESKLLAVKASRMELD
                     KTPSFQLALARAKDDLLAREYLTKEGEGLQKKLHVGEAEVKAFYDKNVDRFKQPELAT
                     VRHILVAVKREGEPGGLGAAEAKQRIAKIQAELKKGAKFEALVKKYSDDPGSKENGGL
                     YEDADPASWVPEFGAAARTQPIGKVGAPVKTQFGYHLIKVEARKAARQVPFEEAKAVA
                     EQGAQRERQAAVWSELMDSLRKEIPFELAKPVTPVAAPAPSPAPKAVEAPKGGGQ"
     gene            3000..>3732
                     /locus_tag="VFV26_08815"
     CDS             3000..>3732
                     /locus_tag="VFV26_08815"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4846307.1"
                     /translation="MRALSPALALALLAPAGLCAATEVREEILVIVNSHIITRRDLTQ
                     AVEQQHAALYRQFSGKELDEKLKDAREKTLQGLVDAFLLEDKGAELGSPITDEYIRAS
                     IDGIKKENNFATDADLERALRSSLGIGLPEFLKRQKQQATQQFVLQREVFSKVAVEDN
                     ELRAYYEDHKEEYRLPFRFRIRELVLAKGATAGEQAEARKKLEAIQAELKAGKSFEEL
                     ARQHSTSPSKATGGDLGWMNKGFLRA"
BASE COUNT          587 a         1273 c         1327 g          545 t
ORIGIN      
        1 ctctgtggcc tcggtgtctc cgtggtgaat ctctatcttt gaacgctgct ccgtatgagc
       61 gggtgcctgc atcaatcctt ccatggtccc cgcagggccg aggccagggc ctcgatctga
      121 tcccaggcca ggtgggcccc cgtggtgatc cgcagccgcg ccgagccctc gggcaccgtg
      181 ggggggcgca cggcgcggac atcgaagccc cgggcctgga ggcgggccgc caggtccacg
      241 gccagggcat ccggacccac gggcaccggg acgatggcgg agggctggct gggttgctcc
      301 agggcctccc gcaggcggcc ggcgaaggcg agggcccgct cccggcgcca gggttcggcc
      361 tgggcgatgc gcacgccttc cagggccgcg ccgagcaccg gcggaggcag ggccgtggag
      421 aagatgaagc cgcgggcggt gttcagcagg tgctcgcgca ggagggcctc gccacaaacg
      481 aaggccccga aggcgcccag ggccttgccg agggtcccca tgaccagggg cacccggccg
      541 tggacgccct ggagctgcgc cagccctgcg ccgtcggccc ccagcaggcc cgtggcgtgg
      601 gcctcgtcga cgagcagcag ggcgccgtgc cgatggcaga gatccagcag ggccggaaga
      661 tctgccgcgt cgccatccat gctgaacacg gcgtccgtgg ccaccagcga cagggcgccg
      721 tccggagccg tcccgcgcca ggccgcgagc tgggtttcga gatccgccag gtccaggtgc
      781 cggtagatgc ccaggtgggc gccgccggcc cgggccaggc ggcagccgtc caccagggag
      841 gcatggttga gggcatcgga gaacaccgca tcgccggcgc ccgccagggc ggggatgagg
      901 gtggcattgg cctggaagcc cgtgttgaag agcaggcagg cctcggtgcc cttccaggcg
      961 gcgagggcgg cttccagttc ctcgtgcagg gccgtggtgc cccgcaggag ccgggcgccc
     1021 ccggcgccgg agccatgctc gcgggccgcc gccgccgcgg cttccgccag ccggggatcc
     1081 cgccgcaggc ccaggtagtc gttggagcag aagtccaccc cggcggcggg ccggatggcc
     1141 cggtcccggc ccagggtccg ccggcgttcc gcgtgctgct gaaggcgttg ccgccagggg
     1201 gaggggatca tggaacctcg gggtccttgg aggcagggta gaggtggggg aatgttagga
     1261 tcaaaggggg atccaacgcg gatctccctt ggagcgtggc atggattatc agcagtcgtg
     1321 gcagggagcc tccaccggag cgcagtcccg cgtcgatttt gtccgcagcg tctacctctg
     1381 gctcatgggc gggttcgcgg tggcggccct gggggccctc agcgcgccct tcatcgccca
     1441 ggccctgatt ccggtggcgg gccgcttcct gggctgggtg ctcttcgggg tccagttcgg
     1501 gaccctgctg ttcgcttcct cggtgagccg ccgcaagccg ctgaaccggc tggcctacgg
     1561 ccttttcacg ttcgtgtccg gcgtcatcgc ggggatcctc gccctggtca tcgcccgggg
     1621 cgccggattc acgccggtgt tcacggcctt cggcctcacg ggtgtggtgt tcctgacgct
     1681 gacggtgacg gccttcgtgt ccaagaagga cttcagcttc ctgcggaact tcgtcatcgt
     1741 gggcatcgcc gtgatgttct tcggtggcct ggcggcggcc atcttccagc tggagacctt
     1801 cggcctgatc atctccggcg tggcggtcat cgcctgctcg gcgaagctgc tgtgggacac
     1861 gtccaccatg ctgcgcaccg acgatttcgg cgatcccgca ggcttcgccc tctccctctt
     1921 cgtgagcctc tacaacatct tcatctccct gatgaacctt ctcggtggcc ggcgccgcta
     1981 gcgcctgccc aacatccaag gatattcatg ctccgtgctt ccctgatctc cctgatcgcc
     2041 ctcggtgtcg tggcacagga accggcccag gcgccggcgg ccgctccggt ccaggccccc
     2101 gtccaggctc ccgcccccaa gcctgaggag gtggtgctgg ccaaggtggg tggcgaaccc
     2161 atcaccgagg ccgatttcca atccgccttc cgcctgctgg gccagcagga gcagatgcag
     2221 atcctcatgg tgcaaggggg caaggaggag ttcgtcaagc gcatggccga gagcaagctc
     2281 ctggccgtca aggcctcgcg catggagctg gacaagacgc cctccttcca gctggccctg
     2341 gcccgcgcca aggatgatct cctggcccgc gagtacctga ccaaggaagg cgagggcctc
     2401 cagaagaagc tccatgtcgg cgaggctgag gtgaaggcct tctacgacaa gaacgtggac
     2461 cgcttcaagc agcccgagct ggccacggta cgccacatcc tggtggcggt gaagcgcgag
     2521 ggggaacccg gcgggctcgg cgccgccgag gccaagcagc gcatcgcgaa gatccaggcg
     2581 gaactgaaga agggcgccaa gttcgaggcc ctggtcaaga aatacagcga cgatcccggc
     2641 agcaaggaga atggcggact ctacgaggat gcggatcccg cttcgtgggt gccggaattc
     2701 ggcgccgccg cccgcaccca gcccatcggc aaggtgggcg ccccggtgaa gacccagttc
     2761 ggctatcacc tcatcaaggt cgaggcgcgc aaggccgccc ggcaggtccc cttcgaagaa
     2821 gccaaggccg tggcggagca gggcgcccag cgcgagcggc aggcggcggt ctggagcgag
     2881 ctgatggaca gcctccgcaa ggagatcccc ttcgagctgg ccaagcctgt cactccggtc
     2941 gcggcccccg cgccgagccc ggctcccaag gccgtggaag cccccaaggg cggtggccag
     3001 tgagggcgct gagtcccgcc ctggccctgg cgctcctggc gcccgccggc ctctgcgccg
     3061 ccacggaggt gcgcgaggag atcctcgtca tcgtcaacag ccacatcatc acccgccggg
     3121 acctgaccca ggccgtggag cagcagcatg cggccctcta ccggcagttc tcgggcaagg
     3181 agctggacga gaagctgaag gacgcccggg agaagaccct gcagggcctg gtggacgcct
     3241 tcctgctgga ggacaagggc gccgagctgg gctcgcccat cacggacgag tacatccgcg
     3301 ccagcatcga tggcatcaag aaggagaaca acttcgccac ggatgcggat ctggagcggg
     3361 ccctgcggag cagcctgggc atcggcctcc ccgagttcct gaagcgccag aagcagcagg
     3421 ccacccagca gttcgtgctg cagcgggagg tcttctccaa ggtcgcggtg gaggacaacg
     3481 agctgcgcgc ctactatgag gaccacaagg aggagtaccg cctccccttc cgcttccgca
     3541 tccgcgagct ggtgctggcc aagggcgcca cggccgggga gcaggccgag gcccgcaaga
     3601 agctggaggc catccaggcc gagctgaagg ccgggaagtc cttcgaggag ctggcccgcc
     3661 agcactccac gagcccgagc aaggccaccg gcggcgatct ggggtggatg aacaagggct
     3721 tcctccgcgc ca
//
LOCUS       DASUDT010000431         2151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_639021, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000431 DASUDT010000000
VERSION     DASUDT010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639021"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VFV26_08820"
     CDS             complement(<1..195)
                     /locus_tag="VFV26_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX4846308.1"
                     /translation="MLEAFLIPSLAVLVLLAWGIDYINGFHDTANSIATVVSTGVLPA
                     KYALIMSATLNFAGALAGTSV"
     gene            complement(203..850)
                     /locus_tag="VFV26_08825"
     CDS             complement(203..850)
                     /locus_tag="VFV26_08825"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEX4846309.1"
                     /translation="MSLNALMRWLKPREMVFFDLLESAAGNAYQASQLFDLEIRTGDP
                     VRFAELRRQMKDLEHIGDDYTREIMDRLNQTFVTPIEREDIMALAHALDDVVDSIHAV
                     CERLILYRISHVMPAVTEISSLLVEGAGELVHLIRSLRNMSNQKEIRDRIRRVHTLEN
                     KADSIYHAALAQIYEDPKDAIELIKWKELLNRIEDATDKIELVAKVVGSTVMKNA"
     gene            1003..>2151
                     /locus_tag="VFV26_08830"
     CDS             1003..>2151
                     /locus_tag="VFV26_08830"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX4846310.1"
                     /translation="MPVFLTRALICLAAMLFLGLGLGMSVHKGLSALWVLGLVVTLAF
                     VVVLMARWQVRPIAEPLEQLLGGTRPRAIEDLPRAWSALERENLDLRERAVRDDRLLP
                     SIMARIEEGVLLFGASGGLEQFNPAAQRHLGLGAPLAKGMAVAQVLPDAASAAAVQRA
                     YAGVPSEWRMARAARTLRVRAIPFAPLGAVSGVLVTLDDVTSQEALETTRQKFISNVS
                     HELKTPVTAIRIAAENLQEEALSEPAQAGAQSILRSVDRLALLLGDLSELSRIESGAL
                     HLEPVRLELAAFVAGLVKDQQARLAASQVALDVAVEAPPGGMLVADPLRLSQVLENLL
                     SNAIKFSPPGSRVRLGVRLSEQGQFWEVSDQGPGIPEAEQGRIFERFYR"
BASE COUNT          324 a          674 c          794 g          359 t
ORIGIN      
        1 cacggaggtg ccggccaggg ccccggcgaa attgagggtc gcggacatga tcagggcgta
       61 cttggcggga agcacgccgg tgctcaccac cgtggcgatg gagttggccg tgtcgtggaa
      121 cccgttgatg tagtcgatgc cccaggcgag aaggaccagg accgccaggg acgggatgag
      181 gaacgcttcg agcatggggg cctcaggcgt tcttcatgac ggtggagccc acgaccttgg
      241 ccacgagctc gatcttgtcc gtcgcgtcct cgatgcggtt gagcagttcc ttccacttga
      301 tgagttcgat ggcgtccttg gggtcttcgt agatctgggc cagggcggcg tggtagatgg
      361 agtccgcctt gttctccagc gtgtggacgc gccggatccg gtcccggatc tccttctggt
      421 tggacatgtt ccgcagggag cggatgaggt ggacgagctc gccggcccct tccaccagga
      481 gggagctgat ctcggtgacg gcgggcatca cgtggctgat gcggtagagg atgaggcgct
      541 cgcagaccgc gtggatggaa tccaccacgt catcaagggc gtgggccagg gccatgatgt
      601 cttcccgctc gatgggcgtg acgaaggtct ggttcaaccg gtccatgatc tcgcgggtgt
      661 agtcgtcgcc gatgtgctca aggtccttca tctggcggcg cagctcggcg aaccggaccg
      721 gatcgcccgt ccggatctcc aggtcgaaga gctgggaggc ctggtaggcg ttgccggcgg
      781 cggattcgag gaggtcgaag aagaccatct cccggggttt cagccagcgc atcagggcat
      841 tcaaggacat aacggctccc aacaggtccg ctatcaactg taccgggtcc ggccttccaa
      901 caggagcgta aattccgcgg ggccgctggg atgcgggcgg cgggcagtgt aaggtctgag
      961 ggcatggagc atccggaatt ccagaaaggc ggcggatcgg ggatgccggt cttcctcacc
     1021 cgcgccctga tctgcctggc cgccatgctc ttcctgggcc tggggctcgg catgagcgtc
     1081 cacaaggggc tctcggcgct ctgggtcctg ggcctggtgg tcaccctggc cttcgtggtg
     1141 gtgctcatgg cccgctggca ggtgcggccc atcgccgaac ccctggagca gctgctgggc
     1201 ggaacgcggc ccagggccat cgaggacctg ccgcgggcct ggtcggccct ggaacgggag
     1261 aatctggacc tccgggagcg cgccgtccgg gatgaccggc tgctgcccag catcatggcg
     1321 aggatcgagg agggggtgct ccttttcggc gccagcggcg ggctggagca gttcaatccg
     1381 gcggcccagc gccacctcgg cctgggagcc cctctggcca aagggatggc cgtggcccag
     1441 gtcctgcccg atgccgccag cgccgccgcc gtccagcggg cctatgcggg cgtgccctcg
     1501 gaatggcgca tggcccgcgc ggcccggacc ctgcgggtgc gcgcgatccc gttcgcgccc
     1561 ctgggggcgg tgagcggtgt gctggtcacc ctggacgacg tcaccagcca ggaggccctg
     1621 gagaccaccc ggcagaagtt catctccaac gtgagccatg agctgaagac ccccgtgacg
     1681 gccatccgca tcgccgccga gaacctgcag gaggaggccc tgtcggaacc ggcccaggcg
     1741 ggggcccagt ccatcctgcg ctccgtggac cggctggcgc tgctgctggg ggatctttcg
     1801 gagctgagcc gcatcgagag cggcgccctc cacctggagc ccgtgcgcct ggagctagcg
     1861 gccttcgtgg cgggcctggt gaaggaccag caggcccgac tggcggcttc gcaggtggcc
     1921 ctggacgtgg cggtggaggc cccgccgggg ggaatgctgg tggccgatcc gctccgcctg
     1981 agccaggtcc tggagaacct gctatccaac gccatcaagt tcagccctcc ggggagccgg
     2041 gtgagactgg gggtccgcct gtcggagcag gggcagttct gggaagtctc cgaccagggg
     2101 ccgggcatcc cggaagcgga gcaggggcgg atcttcgagc gcttctaccg c
//
LOCUS       DASUDT010000432         5937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1897718, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000432 DASUDT010000000
VERSION     DASUDT010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5937
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897718"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..1209
                     /gene="glnS"
                     /locus_tag="VFV26_08835"
                     /pseudo
     CDS             10..1209
                     /gene="glnS"
                     /locus_tag="VFV26_08835"
                     /inference="COORDINATES: protein motif:HMM:NF015883.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
     gene            1285..1590
                     /locus_tag="VFV26_08840"
     CDS             1285..1590
                     /locus_tag="VFV26_08840"
                     /inference="COORDINATES: protein motif:HMM:NF044671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846311.1"
                     /translation="MSAVHAIKAEVRLYESLFTQEDPMDVAEGQDWKTLLNPGSLEAL
                     TEARLEPSLAQAQPGERFQFERTGYFAVDPDSQPGRPVFNRTVGLKDSWAKLEARIG"
     gene            1805..2866
                     /gene="nuoH"
                     /locus_tag="VFV26_08845"
     CDS             1805..2866
                     /gene="nuoH"
                     /locus_tag="VFV26_08845"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF004741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEX4846312.1"
                     /translation="MDKLASLLHTSPAVAWMAVKILIVFGGVMSLAAVWTWVERRGSA
                     MIQDRIGPNRAALFGRWPILGLGQILADGIKFFFKEDLVPHDANKRLFWLAPFLAFVP
                     ALMGFAVIPFGRSFVSDGHTYHLALLDPGNGMGMLYPLAIGGMAVYGVLVAAWSSNNK
                     WSILGGMRASAAMVSYEIGMSLAVITIFMTTGGYDPSEIISAQSHLPWAWNIVRQPLG
                     FIVFFTCMFAETNRLPFDFAEGESEIVAGFNTEYGSMKFSLLALAEYSHLMTASALIA
                     TMYFGGWQVPFVREPGVLLSVAAFLGKMLFFAWVFVWIRWTLPRFRYDQLMHLGWKVM
                     LPLSMANLVFHAWRMSQGH"
     gene            2877..3440
                     /locus_tag="VFV26_08850"
     CDS             2877..3440
                     /locus_tag="VFV26_08850"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEX4846313.1"
                     /translation="MGVLVKKVELSWLDRTYVWPVMKGMGITFQHFLKQLFTPTAKRY
                     TIQYPEMKKEMPEGYRGLHELKRFEDGAIKCVACFMCQEACPARCISIEAEEFSELNL
                     TQGFEEKRPAKFKIDMLRCIYCGMCEEACPKDAIWLRKDYEVAAYDRLSMQYGKWDLM
                     NTYTDADGKDRITQDPTPSVPRRTIAL"
     gene            3451..3945
                     /locus_tag="VFV26_08855"
     CDS             3451..3945
                     /locus_tag="VFV26_08855"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX4846314.1"
                     /translation="MFITFALITLLGALGMLLQKNVVVAGLCMVATFFGVAGLFVLLA
                     NPVAAALQIIVYSGAIMVLVLFVIMMLNSHQEEEAAASRPVQRWLSLALLAALAFGAV
                     KLVLSSGGLKAVAEKGAAMPQAMTLQKAGTALFADHLLGFEVAGLLLLAAMIGAVALT
                     KRNL"
     gene            3956..4294
                     /gene="nuoK"
                     /locus_tag="VFV26_08860"
     CDS             3956..4294
                     /gene="nuoK"
                     /locus_tag="VFV26_08860"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX4846315.1"
                     /translation="MTGMDAIHQILNGGLQGYLVVALLLFALGLATVLLRRTLLLQFM
                     GVELMLNAANVALLAFARFRGGDAQATVFYLFIIAVAACEAAVGLALVIGLFRHRDTT
                     DSDRAASLKQ"
     gene            4302..>5937
                     /gene="nuoL"
                     /locus_tag="VFV26_08865"
     CDS             4302..>5937
                     /gene="nuoL"
                     /locus_tag="VFV26_08865"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX4846316.1"
                     /translation="MNKYYWLIPILPLLGAAFNGLLGKRAGKGAVTVVGLGVVLGSLL
                     LAVSAFLAMKAAPDHRLILNYGEWMATGALSVPFGLVIDPLSGTMMLVITGIGFLIHL
                     YSVGYMHADEGYARFFSYLNLFVFFMLTLVLGSSLALMFVGWEGVGLCSYLLIGYYFE
                     TDFAPRAGLKAFLFNRVGDLGVSIGMLVLFAAFGTLTVADILTQAGHLAPEVGFGVLT
                     FATLMLFVGATGKSAQLPLYLWLPDAMAGPTPVSALIHAATMVTSGIYMICRLAPVFT
                     LAPITMDVVAWVGGATALFAATIGLFQRDIKKVLAYSTVSQLGYMFLGLGAAGFAAGF
                     FHVFTHAWFKALLFLGAGSVIHAMHHEQDLFKMGGLKAKTKITFITMVAGTVAIMGFP
                     GTSGFFSKDEILYLAYLKSPALWVVGVIAACCTSFYMWRLMALTFWGEPRDHHAYDHA
                     HESPLTMTLPLMVLALGSLLWGFWGVPEAFGGHFQIGEWLKPALTFGQTHGAHGHHEG
                     PAVLLAIISTTLGLIFGFLGWSKYKAGPEWELAFAAK"
BASE COUNT          912 a         2082 c         1880 g         1063 t
ORIGIN      
        1 aacggctacc tgcacatcgg ccacgccaag agcatctgcc tgaacttcgg cctggcgaag
       61 gcctacgggg gcgccaccaa cctgcgcttc gacgacacca accccgtcaa ggaagacgtg
      121 gaatacgtgg attccatccg cgaggacgtc cagtggctgg gcttccagtg gaagggcgag
      181 cactacgcgt ccgactactt ccccttcctc tacgactacg cggaatacct gatccagcag
      241 ggcagggcct acgtctgcga cctgagcgag gcggaaatcc gcgagtaccg cggcaacttc
      301 catgtccccg ggaagaacag cccgtaccgg gaccgcagcc ccgaggagaa cctggacctc
      361 ttccgccgca tgaaggccgg tgagttcccg gacgggtcga aggtgctgcg cgcgaagatc
      421 gacatggcga gcggcaacat gaacatgcgc gacccgctca tgtaccgaat ccgccgggcc
      481 caccaccacc gcacgggcga tgcctggtgc atctacccca tgtacgacta tgcccacggc
      541 gtgtccgacg ccatcgagac catcacccac tccctctgca ccctggaatt ctcggaccac
      601 cggccgctct acgactggtt cctggagcag gacgtggacg ggaaattctt ccagcgcccc
      661 ctgccgcgcc agatcgagtt cgcccgcctg aatctcacct acacggtgat gagcaagcgg
      721 cgcctgctgc agctcgtgca ggagggcatc gtgcggggct gggacgatcc ccgcatgccc
      781 accatctgcg gcctgcggcg ccggggctgc acccccgagg ccgtgcgggc cttcgccgag
      841 cgggtgggcg tggccaagcg cgacatggtg gccgatgtgg gcctcctgga attctgcatc
      901 cgcgaggacc tggagaagcg ggccccccgc cgcatggccg tgctgcgtcc cctcaaggtg
      961 gtcatcacca acatgacgga ggccgaggcc ttcgaggtgg aggtggccaa ccatccggac
     1021 gatccgtcca tgggcacccg gaagctgccc ttcacccggg agctgttcat cgaccaggac
     1081 gacttccgcg agtaggcccc caagaagtgg ttccgcctgg cgccgggtgc cgaagtgcgc
     1141 ctccgggggg cttgtcttgt cacctgcaag gacgtgatca gggatgccgc cggtgccgtg
     1201 gtggaactgc gctgcgagtg ggatcccgcc agccggggcg gcaacgcgcc cgacggccgc
     1261 aaggtgaagg gcaccctcca ctgggtgagc gccgtccacg ccatcaaggc cgaggtccgc
     1321 ctctacgagt ccctcttcac ccaggaggac cccatggacg tggccgaggg ccaggactgg
     1381 aaaaccctcc tgaaccctgg aagcctggag gcgctgacgg aggcccgtct cgaacccagc
     1441 ctggcgcagg cccagcccgg cgagcgcttc cagttcgagc ggaccggcta cttcgccgtg
     1501 gatcccgaca gccagccggg ccggcccgtg ttcaaccgga cggtggggct gaaggacagc
     1561 tgggctaagc tcgaggcccg gattggctga atcccgggct gcgcccggga ttcagtaggg
     1621 cctgccttgc atgtcgattt ttcatgctat tcctgctcgg gcgcgtgcgc gcccgagccc
     1681 agggctgtga cccaggtcgc atcggcaccc ggggagttct ttccctccgt gtcgggaacg
     1741 ccgcggctct gataggctcg atgggttggg cctccccgag ggtggccctg ccgggaagcc
     1801 gcccatggac aagctcgcga gcctgctgca cacctccccc gccgtcgcct ggatggcggt
     1861 gaagatcctg atcgtgttcg gcggcgtcat gtcgctggcc gccgtctgga cctgggtgga
     1921 gcgacgaggt tcggccatga tccaggaccg catcgggccc aaccgggccg ccctcttcgg
     1981 ccgctggccg atcctgggcc tgggccagat cctggcggat ggcatcaagt tcttcttcaa
     2041 ggaggacctg gtcccccacg acgccaacaa gcggctcttc tggctggcgc ccttcctcgc
     2101 cttcgtgccg gccctcatgg gctttgcggt gatccccttc ggccggagct tcgtgagcga
     2161 cggccacacc taccacctgg ccctgctgga tccgggcaac ggcatgggca tgctgtatcc
     2221 cctggccatc gggggcatgg cggtctacgg cgtgctggtg gcggcctggt ccagcaacaa
     2281 caagtggtcg atcctcggcg gcatgcgggc ttccgcggcc atggtgagct acgagatcgg
     2341 catgagcctg gccgtgatca ccatcttcat gaccacgggc ggctacgatc cctccgagat
     2401 catctcggcc cagagccacc tcccctgggc ctggaacatc gtccggcagc ctctcggctt
     2461 catcgtcttc ttcacctgca tgttcgccga gacgaaccgc ctgcccttcg acttcgccga
     2521 gggcgagagc gagatcgtgg cgggcttcaa cacggaatac gggagcatga agttcagcct
     2581 cctggccctg gcggaatatt cgcacctgat gacggcctcg gctctcatcg ccacgatgta
     2641 cttcggcggc tggcaggtgc ccttcgtgcg ggagcccggc gtgctgctgt ccgtggccgc
     2701 cttcctcggg aagatgctgt tcttcgcctg ggtcttcgtg tggatccgct ggaccctgcc
     2761 gcgcttccgc tacgaccagt tgatgcacct cggctggaag gtgatgctgc cgctctccat
     2821 ggccaacctg gtcttccacg cctggcgcat gagccaggga cactgaggag ttcgcaatgg
     2881 gtgtcctggt caagaaggtc gagctgagct ggctggaccg cacctatgtg tggccggtga
     2941 tgaagggcat ggggatcacg ttccagcact tcctcaagca gctcttcacg cccacggcga
     3001 agcgctacac gatccagtat ccggagatga agaaggagat gcccgaaggc taccggggcc
     3061 tccacgagct gaagcgcttc gaagacgggg ccatcaagtg cgtggcctgc ttcatgtgcc
     3121 aggaggcctg cccggcccgc tgcatcagca tcgaagccga ggagttcagc gagctgaacc
     3181 tcacccaggg cttcgaggag aagcgcccgg ccaagttcaa gatcgacatg ctgcgctgca
     3241 tctactgcgg catgtgcgag gaggcctgcc ccaaggacgc catctggctc cgcaaggact
     3301 atgaagtggc cgcctacgac cgcctctcca tgcagtacgg caagtgggac ctgatgaaca
     3361 cctacaccga cgccgacggc aaggaccgca tcacccagga tcccaccccc tccgtgccgc
     3421 gccgcacgat cgcgttgtaa gggagcggcc atgttcatca cctttgccct catcaccctc
     3481 ctgggcgccc tggggatgct gctgcagaag aacgtcgtcg tggcgggcct ctgcatggtg
     3541 gccaccttct tcggcgtggc cggcctcttc gtgctgctgg ccaatcccgt ggccgccgcc
     3601 ctccagatca tcgtctacag tggcgccatc atggtgctgg tgctcttcgt gatcatgatg
     3661 ctgaacagcc accaggagga ggaggccgcg gcctcccgcc ccgtgcagcg ctggctgtcc
     3721 ctggccctgc tggcggccct cgccttcggc gccgtgaagc tggtgctttc ctccggcggc
     3781 ctgaaggccg tggcggagaa gggcgccgcg atgcctcagg ccatgaccct gcagaaggcg
     3841 ggcacggccc tcttcgccga ccacctgctg ggcttcgagg tggcgggcct cctgctgctg
     3901 gcggccatga tcggcgccgt ggctctgaca aagcggaacc tgtgaggagc ccacgatgac
     3961 cggcatggac gcgatccatc agatcctcaa cggcggcctc caggggtacc tggtggtggc
     4021 ccttctcctc ttcgccctgg ggctggccac ggtgctgctg cgccgcaccc tcctcctcca
     4081 gttcatgggt gtggagctga tgctcaacgc cgccaacgtg gccctgctgg ccttcgcccg
     4141 cttccgcggc ggggatgccc aggccacggt gttctacctc ttcatcatcg ccgtggccgc
     4201 ctgtgaggcg gccgtcggcc tggcgctggt catcggcctc ttccgccatc gggacaccac
     4261 cgattcggac cgggccgcga gcctgaagca gtgaggatgc gatgaacaag tactactggc
     4321 tcattccgat cctccccctg ctgggcgcgg ccttcaacgg cctgctgggc aagcgcgcgg
     4381 gcaagggcgc cgtcaccgtt gtggggctgg gcgtggtgct gggctccctg ctgctggccg
     4441 tttccgcgtt cctggccatg aaggccgccc cggaccaccg gctcatcctg aactacggcg
     4501 agtggatggc cacgggcgcc ctcagcgtgc ccttcggcct ggtcatcgat cccctcagcg
     4561 gcaccatgat gctcgtcatc acgggcatcg gcttcctcat ccacctctac tccgtgggct
     4621 acatgcatgc ggatgaaggc tacgcgcggt tcttcagcta cctgaacctc ttcgtcttct
     4681 tcatgctgac cctggtgctg ggatcgagcc tggcgctgat gttcgtgggc tgggagggcg
     4741 tgggcctctg ctcctacctg ctcatcggct actacttcga aacggatttc gcgccccggg
     4801 ccggcctcaa ggccttcctc ttcaaccgcg tgggcgacct gggcgtgtcc atcggcatgc
     4861 tggtgctctt cgcggccttc ggcaccctga cggtggccga catcctcacc caggcggggc
     4921 acctggcccc ggaagtgggc ttcggcgtcc tcaccttcgc cacgctgatg ctcttcgtgg
     4981 gcgccacggg caagagcgcc cagctgcccc tctacctctg gctgccggac gccatggcgg
     5041 gccccacgcc cgtcagcgcc ctcatccacg cggccaccat ggtgaccagc ggcatctaca
     5101 tgatctgccg cctggcgccg gtgttcacgc tggcccccat caccatggac gtggtggcct
     5161 gggtgggcgg ggccacggcc ctcttcgccg ccaccatcgg ccttttccag cgcgacatca
     5221 agaaggtgct ggcctactcc accgtctccc agctgggcta catgttcctg gggctgggcg
     5281 cggcgggctt cgcggctggc ttcttccacg tcttcaccca cgcctggttc aaggccctcc
     5341 tcttcctcgg cgccggcagc gtgatccacg ccatgcacca cgagcaggac ctgttcaaga
     5401 tgggcggcct caaggccaag acgaagatca ccttcatcac catggtggcc ggcaccgtcg
     5461 ccatcatggg cttccccggc acctcgggct tcttcagcaa ggacgagatc ctctacctgg
     5521 cctacctgaa atccccggcc ctctgggtgg tcggcgtcat cgccgcctgc tgcaccagct
     5581 tctacatgtg gcgcctcatg gccctcacct tctggggcga gccccgggac caccacgcct
     5641 acgaccacgc ccatgaaagc cccctgacca tgacgctgcc gctcatggtg ctggccctgg
     5701 ggtccctgct ctggggcttc tggggcgtgc ccgaggcctt cggcgggcac ttccagatcg
     5761 gcgagtggct gaagccggcc ctcaccttcg gccagaccca cggcgcccac ggccaccacg
     5821 agggtcctgc ggtgctgctg gcgatcatct ccaccaccct gggcctgatc ttcggcttcc
     5881 tgggctggtc caagtacaag gccggccccg aatgggaact ggcctttgcc gcgaagt
//
LOCUS       DASUDT010000433         3022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_837494, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000433 DASUDT010000000
VERSION     DASUDT010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_837494"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VFV26_08870"
     CDS             <1..445
                     /locus_tag="VFV26_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEX4846317.1"
                     /translation="AQVNQERGAQFACPIGTMIEIPRAALTSDQIATEAEFFSFGTND
                     LTQMGFGFSRDDAGSFLPEYVGKKILEDDPFQSLDQEGIGELVRISCEKGRAARPGIK
                     LGVCGEHGGDPRSVTFFHGVGLDYVSCSPYRVPIATLAAAQAALD"
     gene            complement(447..833)
                     /locus_tag="VFV26_08875"
     CDS             complement(447..833)
                     /locus_tag="VFV26_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846318.1"
                     /translation="MNQVVARFLDGTTLKGQTSDFLPAKSLFHITANGDKPREVKVPD
                     LKALYFVRNLEGDPDHHKTNEFPPFAPSPGRKVRVAFKDGEVLVGTTQGYQPDRPGFF
                     LLPADPRSNNERCFVVMASTQSVAFV"
     gene            1036..2733
                     /gene="ettA"
                     /locus_tag="VFV26_08880"
     CDS             1036..2733
                     /gene="ettA"
                     /locus_tag="VFV26_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX4846319.1"
                     /translation="MAKTATKASSEQPEIIYSMMRVSKIYNNKPVIKDISLSYFYGAK
                     IGVLGLNGSGKSTVLRIMAGVDQDFNGEAVLSKGYTTGILDQEPQLDPEKTVREIVEE
                     GAAEKVGWLKDYNAISDQFADPDADMDVLLAKQAELQDKIDAHDCWDLDSRLEQAMDA
                     LRCPEPDTKIGVLSGGERRRVALCRLLLQEPDILLLDEPTNHLDAETVAWLEKHLQDY
                     KGTVIAVTHDRYFLDHVAQWILELDRGEGIPWKGNYSSWLEQKQGRLAREEKSDQKRQ
                     KTLERELEWIRMSPKGQHAKSKDRIANYERLAGEEGRQKEQELEIYIPSGPRLGDLVA
                     ELNGVSKAYGDRVLFENLSFAIPRAGILGVIGPNGAGKSTLLRLLTGQETPDAGTIRL
                     GETVRMAYVDQLRSGLNLDKSVFEAVSGGYEQIELGGKLINARAWLSRFGFSGDSQQK
                     KISELSGGQQNRLNLALTLKSESNLLFFDEPTNDLDVNTMRALEEAIESFAGSAVLVS
                     HDRWFLDRLATHILAFEGDSQVQFFDGNYSQYEEYRKDVLGLKPFDPHRIKYRKLTR"
     gene            2730..>3022
                     /locus_tag="VFV26_08885"
     CDS             2730..>3022
                     /locus_tag="VFV26_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846320.1"
                     /translation="MTLDGSRASGLALLTAGSALALGGAALWLGLSEGAIAFWGFGAA
                     GLLQAPPALSLRERVRDGLGNRGLERERLILRAVSHVLRFLALGMALAAASAL"
BASE COUNT          548 a         1014 c         1000 g          460 t
ORIGIN      
        1 cgcccaggtg aaccaggagc ggggcgccca gttcgcctgc cccatcggca ccatgatcga
       61 gatcccccgg gccgccctca cctccgacca gatcgccacg gaggccgagt tcttcagctt
      121 cggcaccaac gacctcaccc agatgggctt cggcttcagc cgcgacgatg cgggtagctt
      181 cctgccggaa tatgtcggga agaagatcct ggaggacgac cccttccaga gtctggacca
      241 ggagggcatc ggcgagctcg tgcgcatctc ctgcgagaag ggccgcgccg cgcgccccgg
      301 catcaagctg ggcgtctgtg gcgaacacgg cggcgatccc cgcagcgtga ccttcttcca
      361 cggcgtggga ctggactacg tcagctgcag cccctaccgg gtgcccatcg ccaccctggc
      421 ggccgcccag gccgccctgg actgacctac acgaaggcca cggactgcgt ggaggccatc
      481 accacgaagc agcgctcgtt gttggaccgc ggatcggccg ggagcaggaa gaagcccggc
      541 cggtccggct ggtagccctg ggtggtgccc accaggacct ccccatcctt gaaggccacc
      601 cggaccttgc ggcccggcga gggggcgaat ggggggaact cgttggtctt gtgatgatcc
      661 ggatcgccct cgagattccg gacgaagtac agggccttga ggtccgggac cttcacctcc
      721 cggggtttgt cgccgttcgc cgtgatgtgg aaaaggcttt tggccggcag gaaatcgctg
      781 gtctggccct tgagggtcgt tccatccagg aagcgcgcca ccacttggtt cacgggagtc
      841 tccgaagggc atctgctggg atgaagggct gatggtgaat cttggtgcct caaaattaca
      901 agtaggcgcc cgtccatgca aggggcaagg tggcgctcca ggggtgggca ggccccaggt
      961 tcgatccggc ggggatggga tccgggccag acgcccgctg ggaagcgcga tagaatcgcc
     1021 cttttcgagc gaatcatggc caagaccgcg accaaggcgt cctccgaaca gcccgagatc
     1081 atctattcga tgatgcgggt cagcaagatc tacaacaaca agcctgtcat caaggacatc
     1141 tcgctcagct atttctatgg cgccaagatc ggcgtgctgg ggctgaacgg ctcgggcaag
     1201 agcaccgtcc tgcgcatcat ggcgggggtg gaccaggact tcaacggcga ggcggtgctg
     1261 agcaagggct acaccaccgg catcctggac caggaacccc agctcgaccc cgagaagacc
     1321 gtgcgggaga tcgtggagga gggcgccgcc gagaaggtgg gctggctgaa ggactacaac
     1381 gcgatcagcg accagttcgc cgaccccgac gcggacatgg acgtcctgct ggccaagcag
     1441 gcggagctgc aggacaagat cgacgcccac gactgctggg acctggactc ccgcctggag
     1501 caggccatgg acgccctgcg ctgcccggag ccggatacga agatcggtgt gctgtcaggc
     1561 ggcgagcgcc gccgcgtggc cctctgccgc ctgctgctcc aggagccgga catcctgctg
     1621 ctggacgaac ccaccaacca cctggatgcc gagaccgtgg cctggctgga gaagcacctc
     1681 caggattaca agggcacggt catcgccgtc acccatgacc gctacttcct ggatcacgtg
     1741 gcccagtgga tcctcgagct ggaccgcggc gagggcatcc cctggaaggg caactactcc
     1801 agctggctgg agcagaagca gggccgcctg gcccgcgagg agaagtccga ccagaagcgc
     1861 cagaagaccc tggagcgcga gctggagtgg atccgcatgt cgcccaaggg ccagcatgcc
     1921 aagagcaagg accgcatcgc caactacgag cggctggcgg gcgaggaggg ccgccagaag
     1981 gagcaggaac tggagatcta catccccagc ggcccgcgcc tgggcgacct ggtggcggag
     2041 ctgaatggcg tctccaaggc ctacggggac cgcgtgctct tcgagaacct gagcttcgcc
     2101 atcccccgcg ccggcatcct gggcgtcatc ggacccaacg gcgccggcaa gtccacgctg
     2161 ctgcgcctgc tcacgggcca ggagacgccg gatgcgggca ccatccgcct gggcgagacg
     2221 gtgcgcatgg cctatgtgga tcagctccgc tcggggctca acctcgacaa gagcgtgttc
     2281 gaggcggtgt ccggcggcta cgagcagatc gagctgggcg gcaagctcat caatgcccgc
     2341 gcctggctga gccgcttcgg cttctccggc gattcgcagc agaagaagat ctccgagctg
     2401 agcggcggcc agcagaaccg cctcaacttg gccctcacgt tgaaaagtga atccaacctg
     2461 ctcttcttcg acgaacccac caacgacctc gacgtgaaca ccatgcgcgc cctggaggaa
     2521 gccatcgaat ccttcgcggg cagcgccgtg ctggtgagcc acgaccgctg gttcctggac
     2581 cgcctggcca cacacatcct ggccttcgag ggcgattccc aggtgcagtt cttcgacggg
     2641 aactacagcc agtacgagga gtaccgcaag gacgtgctgg gcctgaagcc cttcgatccc
     2701 caccgcatca agtaccggaa gctgacgcga tgaccttgga tggctcccgg gcctccggcc
     2761 tggccctcct gacggcagga tcggccctcg ccctcggagg cgccgcgctt tggctggggc
     2821 tttcggaagg cgccatcgcc ttctggggct tcggcgccgc cggcctcctc caggcccctc
     2881 cggccctgag cctgcgggag cgggtccgcg acggcctcgg caaccgcggc ctcgaacgcg
     2941 aacgcctgat cctgcgcgcc gtcagccatg tcctgcgctt cctggccctg ggcatggccc
     3001 tggccgcagc ctcggcgctc at
//
LOCUS       DASUDT010000434         6191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1301991, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000434 DASUDT010000000
VERSION     DASUDT010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6191
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1301991"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VFV26_08890"
     CDS             <1..226
                     /locus_tag="VFV26_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846321.1"
                     /translation="YLTAIRAAGFEAVAVASERCFGLAELSPELMNLAKQRYPGMSPE
                     ELERLASSVLSVQVEATKAEKACCAPGCCG"
     gene            234..1331
                     /locus_tag="VFV26_08895"
     CDS             234..1331
                     /locus_tag="VFV26_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEX4846322.1"
                     /translation="MTVESKTCACAESTPTAAPTSAPAPGPGFWTSGGWLLVALPAWI
                     ALYVALKPIADWLAFRALGLAPGSRLGEAVAFFAYDAPKVLMLLGAVVLGVSFVQTFI
                     SPERTRDLLAKRTGAWSNLLAALLGIATPFCSCSAVPLFIGFVRVGVPLGATFSFLVS
                     APMVNEVALFLLFGLFGWKIALLYTATGVAVAFASGWVLGKLRMERHLEPWVMTVPFT
                     ATEAGSGPAGFGARLDLALQATKDIVRKVWIYVLAGIAVGAFLHGYVPAELLARFMGK
                     SAWWSVPLAVIIGVPLYANAAGIIPIVQVLLAKGAALGTALAFMMAVTGLSLPETVIL
                     RKVLKPRLLGAFLGVVAAGIVLVGYLFNVLM"
     gene            1340..1570
                     /locus_tag="VFV26_08900"
     CDS             1340..1570
                     /locus_tag="VFV26_08900"
                     /inference="COORDINATES: protein motif:HMM:NF024590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX4846323.1"
                     /translation="MKIEVLGSGCAKCKLLAERAEEAAKVLGVDFTLVKVTEYPDIVA
                     RGVMSTPGLVVDGVVKSQGHVPTVAAIRDLLR"
     gene            1598..2641
                     /locus_tag="VFV26_08905"
     CDS             1598..2641
                     /locus_tag="VFV26_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HEX4846324.1"
                     /translation="MRIGILGYGRFGRALGELLHEAGHAYRAWDPWAEVPAERRAASL
                     QALAESPEALVLAVPLAAQAAALASLRPHLQAGQLVFDVGSVKAGPCALMDAQLGAAV
                     PHAGTHPLFGPVSLARAERPLRVVLCPSARHPAAADRVQALFESLGCEVLRQSPEDHD
                     RVMATTHALTFFIAKGLLAVGAGAELPFTPPSFHAIARTLESVREDAGHLFAALQNQN
                     PFAAGAREGLLEALGAIHRSLAEAVASGADEQQLAIPDLGTRSPALQEARDHIDALDQ
                     ELVALLARRTELVLRAGRAKAELGLPVHDPERETAQLQARRTWAQEANLDSQGVEEVF
                     RAVLRASRTAQGR"
     gene            complement(3037..3615)
                     /locus_tag="VFV26_08910"
     CDS             complement(3037..3615)
                     /locus_tag="VFV26_08910"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEX4846325.1"
                     /translation="MAYTAKSYDHLKGGALKGLSDSQLDQHFGLYKGYVTKLNEIEEK
                     LATADNTKPNYSYNEYSELKRREAVAFNGSFLHELYFENLGADSDISAGLQAALDAVG
                     GKDKVLADLKATAMGGPGWAVLTRNRRDGKLHTYFVAEHHLGLPIEQDLLVVLDSWEH
                     AFMVDYGTARAKYLDAFVENIKWSEVSKRFGK"
     gene            complement(3866..4309)
                     /locus_tag="VFV26_08915"
     CDS             complement(3866..4309)
                     /locus_tag="VFV26_08915"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEX4846326.1"
                     /translation="MNRSVIDHLNTELATAFVLALNAKRYHWTVTGPHFRDYHLRFED
                     LYTAADGTVDELAERIRMVGGVPIHAPAQIEAQTRAAISNPAARLDPEAMLKEALANE
                     EVVVSLLHEGIELANETGDPGTADLLTRFVQVHQKEAWFLREMLG"
     gene            complement(4320..4868)
                     /locus_tag="VFV26_08920"
     CDS             complement(4320..4868)
                     /locus_tag="VFV26_08920"
                     /inference="COORDINATES: protein motif:HMM:NF023432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HEX4846327.1"
                     /translation="MTFGFDPATEQARFVSRQAFLARQAALRLELAEGLTFQPETAES
                     VEDQILETLWAEGKTPDTVDAEELAEARASFAVLAPRREAGGQSLAATLFLGFPDQIR
                     EARLAALQRFPDQLCLELSDGSLVAPAVDRGTAGPEDRLPAVLALRYLIPDGFSIAAL
                     VSNHAEGPGRWPAPAAWTSWPS"
     gene            complement(4876..5340)
                     /locus_tag="VFV26_08925"
     CDS             complement(4876..5340)
                     /locus_tag="VFV26_08925"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HEX4846328.1"
                     /translation="MSFTDSKTHQNLKAAFAGESQANRRYTWMAQVAEKEGLPEVAAL
                     FKHSADGETGHALKHLMFLAAQAGDPATGLPLGDTLTNLKSAVAGETYEYTDMYPEFA
                     RLAKEEGYAEIAAWFETLAKVERFHAGRFQDALTKLQSGTMAAPDADIAKHI"
     gene            complement(5508..5987)
                     /locus_tag="VFV26_08930"
     CDS             complement(5508..5987)
                     /locus_tag="VFV26_08930"
                     /inference="COORDINATES: protein motif:HMM:NF025252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX4846329.1"
                     /translation="MDPNTEAMLQALLMGTPVAALGTLHEGAPFVSMAPVAPAPDGSG
                     YLIHVSRLAQHTRDLLADARVSLLFMAPLTEDQDPLALPRLTLQGTAEELPADSAARE
                     AAAEAYLARFPQAEMTLGLWDFSFFLLRPVTGRLVLGFGRALSLDASQIRAALPRGH"
BASE COUNT          903 a         2025 c         2207 g         1056 t
ORIGIN      
        1 ctacctgacc gccatccgcg ccgcgggctt cgaggccgtg gccgtggcct ccgagcgctg
       61 cttcggcctg gcggaactgt cgccggagct gatgaacctg gcgaagcagc gctacccggg
      121 catgagcccg gaggagctgg aacgcctggc gagttcggtg ctgagcgtcc aggtggaggc
      181 caccaaggcg gagaaggcct gctgcgcgcc cggctgctgc gggtgagggg gagatgacgg
      241 tggaatcgaa gacctgcgcc tgcgccgaat caacgcccac tgcggcgccc acttcggcgc
      301 ctgccccggg ccctggcttc tggacttcgg gagggtggct gctggtcgcc ctcccggcct
      361 ggatcgcgct gtacgtggcc ctcaaaccca tcgcggactg gctggccttc cgcgctctgg
      421 gcctggcccc gggcagccgc ctgggcgagg ccgtggcctt cttcgcctac gacgcgccca
      481 aggtgctcat gctcctcggg gccgtggtgc tgggcgtcag cttcgtgcag accttcatca
      541 gccccgagcg cacccgcgac ctgctggcga agcgcacggg ggcctggagc aacctgctgg
      601 cggccctgct gggcatcgcc acccccttct gctcctgctc tgccgtgccc ctcttcatcg
      661 gcttcgtgcg ggtgggcgtg cccctgggcg ccaccttcag cttcctggtg tcggccccca
      721 tggtgaacga ggtggcgctg ttcctgctgt tcggcctctt cggctggaag atcgcgctcc
      781 tctacacggc gaccggcgta gccgtggcct tcgcgtcggg ctgggtcctc ggcaagctcc
      841 gcatggagcg gcacctggaa ccctgggtga tgaccgtgcc cttcacggcc accgaggctg
      901 gcagcggccc tgccggattc ggcgcccgcc tggacctggc gctccaggcg acgaaggaca
      961 tcgtgcggaa ggtctggatc tacgtgctcg cgggcatcgc cgtgggcgcc ttcctgcacg
     1021 gttatgtgcc ggcagagctg ctggcccgtt tcatgggcaa gtctgcctgg tggagcgtgc
     1081 ccctggcggt aatcatcggc gtgcccctct acgccaacgc ggcgggcatc atccccatcg
     1141 tgcaggtgct gctggccaag ggcgccgccc tgggcacggc cctggccttc atgatggcgg
     1201 tgacgggcct gtcgctgccc gagaccgtca ttctgcggaa ggtgctgaag ccgcgcctgc
     1261 tgggcgcctt cctgggcgtc gtcgccgcgg gcatcgtgct ggtgggctac ttgttcaacg
     1321 tgctgatgta ggaggtgcca tgaagatcga agtgctgggc agcggctgcg ccaagtgcaa
     1381 gctgctggcg gagcgggccg aggaggccgc gaaggttctg ggcgtggatt tcacgctggt
     1441 gaaggtcacg gaatatccgg acatcgtggc ccggggcgtg atgtccacgc cgggcctggt
     1501 ggtggacggt gtcgtgaaga gccagggcca cgtgcccacg gtggcggcca tccgcgacct
     1561 gctgcggtag gatttcccca caccacgagg gaatcccatg cgcatcggca tcctgggtta
     1621 tggccgcttc gggcgggctc tgggcgagct cctgcacgag gccggccatg cctatcgggc
     1681 ctgggatcct tgggccgagg tgcccgccga gcgccgtgcc gccagcctgc aggcgctggc
     1741 ggaatcgccc gaggccctgg tgctggcggt gcccctcgcc gcccaggccg ctgcgctggc
     1801 gagcctccgc ccccacctgc aggcgggcca gctggtcttc gatgtgggca gcgtgaaagc
     1861 gggcccctgc gccctgatgg acgcccagct gggggcggct gttccccacg cggggacgca
     1921 tcccctgttc gggcccgtga gcctggcccg ggccgagcgg cccctgcgcg tggtgctctg
     1981 cccctcggcc cggcatcccg ccgcggcgga ccgggtgcag gccctgttcg aaagcctggg
     2041 ctgcgaagtg ctgcgccaga gccccgagga ccacgaccgc gtgatggcca ccacccatgc
     2101 gctcaccttc ttcatcgcca aggggctgct ggccgtgggg gccggggctg agctgccctt
     2161 cacgccgccc tccttccacg ccatcgcccg cacgctggaa tccgtgcgcg aggacgcggg
     2221 ccacctcttc gcggccctgc agaaccagaa ccccttcgcc gccggggccc gggagggcct
     2281 gctggaggcc ctgggcgcca tccaccggag cctggcggaa gccgtggcca gcggcgccga
     2341 tgagcagcag ctggccattc ccgacctggg cacccggtcc cccgccctgc aggaagcccg
     2401 cgaccacatc gacgccctcg accaggagtt ggtggctctg ctggcccgcc ggacggagct
     2461 ggtgctccgg gcgggccgcg ccaaggccga gctgggcctc cccgtccacg accccgaacg
     2521 cgaaactgcg caactccaag cccggcgcac ctgggcccag gaggccaacc tcgacagcca
     2581 gggcgtggag gaggtcttcc gcgccgtgct gagggcgtcc cgaaccgcgc aggggcgctg
     2641 atccgtcgga cagggtcgag cggatcgtgc ccgcccagag tgcttcatgc ggtgcgagac
     2701 aaggacaaag cacaccacca agacaccaag gcaccaagaa aagcaaaagc agttcttggt
     2761 gccttggtgt cttggtggtg aatcagttgc tttgtctatt tcccgaagcc cttggagact
     2821 tcctccaggt atcgggtgca atgcaccctc ctgctcagcc tgtggcttcg cagacctgga
     2881 gcctcccact tgatgttctc gacgaaggcc tcaaggtact tcgcgcgggc ggtgccagcg
     2941 gggccccgac cgtgaagccg agcgaagcga aagctgaacg ggagcaggcc ccatgcgggg
     3001 cctgcgatcc ggggggccat gaggcccgct cgcgccttac ttgccgaagc gcttgctgac
     3061 ttcgctccac ttgatgttct cgacgaaggc gtcgaggtac ttcgcgcggg cggtgccgta
     3121 gtcgaccatg aacgcgtgct cccacgagtc cagcaccacg agcaggtcct gttcgatggg
     3181 caggcccagg tggtgctcgg ccacgaagta ggtgtgcagc ttgccgtcgc ggcggttgcg
     3241 ggtgagcacg gcccagccgg gaccgcccat ggcggtggcc ttgagatcgg cgagcacctt
     3301 gtccttgccg cccacggcat ccagggcggc ctggaggccg gcgctgatgt cgctgtcggc
     3361 gcccaggttc tcgaagtaga gctcgtggag gaaggagcca ttgaaggcca cggcctcgcg
     3421 gcgcttcagc tcgctgtact cgttgtagga gtagttgggc ttggtgttgt ccgccgtggc
     3481 cagcttctcc tcgatctcgt tcagcttggt gacatagccc ttgtagaggc cgaagtgctg
     3541 gtccagctgg gaatcgctga gccccttcag ggcgccgccc ttcaggtggt cataggactt
     3601 ggcggtgtag gccatgacag tctccttggt tgcgcgggac gcggatgatt agtttaccaa
     3661 aaaagtcgga aatcagaaaa agaagctata aggctggagg ctggagactg gagactggag
     3721 actggagact ggagactgga gtctggaggt actgctttct gtgggggcct acggccccac
     3781 cagtgttggc ttttgggccg ctcaagcacg gagggtgcga cagatccatc gaactcaacc
     3841 cccagactcc ggactccaga ctgatctagc ccaacatttc ccgcaggaac caggcttcct
     3901 tctggtggac ctgcacgaag cgggtgagca ggtcggcggt gcccgggtcg ccggtctcgt
     3961 tggcgagctc gatgccctcg tggagaagcg acaccaccac ctcctcgttg gccagggcct
     4021 ccttcagcat ggcttcggga tccagtcggg cggcgggatt ggagatggcc gccctggtct
     4081 gggcctcgat ctgggccggg gcgtggattg gcacccctcc caccatgcgg atgcgctccg
     4141 ccagttcgtc cacggtgccg tcggcggcgg tgtagaggtc ctcgaagcgc aggtggtagt
     4201 cgcggaagtg ggggccggtg acggtccagt ggtagcgctt ggcattgagg gccagcacga
     4261 aggcggtggc cagttcggtg ttcaggtggt cgatgacgga acggttcacg gcaatctcct
     4321 caggaaggcc aggaggtcca ggcggcgggc gcgggccagc ggcctggacc ttcggcgtgg
     4381 ttggagacga gggcggcgat gctgaagccg tccggaatca ggtagcgcag ggccaggacc
     4441 gcgggcaggc gatcctcggg cccggcggtg ccgcggtcca cggcgggggc cacgaggctg
     4501 ccatccgaca actccaggca aagctggtcg ggaaagcgct ggagggcggc cagccgggcc
     4561 tcccggatct ggtccggaaa gcccaggaac agggtggcgg cgaggctctg gccaccggcc
     4621 tcccggcggg gggccagcac ggcgaaggag gcgcgggctt cggccagttc ttcggcatcc
     4681 acggtgtcgg gcgtcttgcc ctcggcccag agcgtttcga ggatctggtc ctccacactc
     4741 tccgccgttt ccggctggaa ggtgaggccc tccgccagct ccagccgcag ggcggcctgg
     4801 cgggccagga aggcctggcg cgacacgaag cgggcctgct cggtggcagg atcgaagccg
     4861 aaggtcatgg ccacctcaga tgtgcttggc gatgtcggcg tcgggggcgg ccatggtgcc
     4921 ggactggagc ttcgtcaggg cgtcctggaa gcggccggcg tggaagcgct ccaccttggc
     4981 cagggtctcg aaccaggcgg cgatctcggc gtagccctct tccttggcca ggcgcgcgaa
     5041 ttccgggtac atgtccgtgt attcgtaggt ttctccggcc acggcggatt tcaggttggt
     5101 gagggtgtcg cccaggggca gccccgtggc gggatcaccg gcctgggcag ccaggaacat
     5161 gaggtgcttc agggcatggc ccgtctcgcc atcggcgctg tgcttgaaga gcgcggccac
     5221 ttccggcagt ccctctttct cggccacctg ggccatccac gtgtagcggc ggttcgcctg
     5281 gctttccccc gcgaaggcgg ccttgaggtt ctggtgggtc ttggagtcgg tgaaggacat
     5341 gggatctcct gaagggccgt aatcggcggc ctcaaggtag agccatcgcc gtgccaaagc
     5401 aataagtcaa accattgaat aaattcgaga atttccaagg agcacgattc cacggaaatc
     5461 ccgaccggcc gagagccgga ttcgcgacat atcgagaagc ctctgattca gtggccccgg
     5521 ggaagggcgg cccggatctg ggaggcatcg aggctgaggg cccggccgaa gccgagcacc
     5581 aggcgcccgg tgacgggccg gaggaggaag aaggagaagt cccacaggcc gagggtcatc
     5641 tccgcttgcg gaaaccgggc caggtaggcc tccgccgccg cctcgcgggc cgcggaatcc
     5701 gcggggagct cctcggccgt cccctgcagg gtcagccggg gcagggccag gggatcctgg
     5761 tcctccgtga gcggcgccat gaacaggagg ctcacccggg catctgccag cagatcgcgg
     5821 gtgtgctggg ccaggcggct cacgtggatg aggtagcccg acccgtccgg cgcaggcgcc
     5881 accggcgcca tggacacgaa gggggcgccc tcatgcagcg tgcccagggc ggccacgggg
     5941 gttcccatca gcagggcctg gagcatcgct tcggtgttcg gatccatggg ggctccttcc
     6001 ggggtggggc ccctccatca tcctctccac cggaagggaa acctcgtggc ctattcgggc
     6061 gtggacgtac cctcttccgc ggtctctccg gtggtctctt ccccgtcctc ggtttcggga
     6121 atgtcgttgc ccagggcgtc ctttttcagg gccttcttct gcagcttctc ttccttcttc
     6181 ttctggcggg c
//
LOCUS       DASUDT010000435         5664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_682771, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000435 DASUDT010000000
VERSION     DASUDT010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5664
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682771"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1060)
                     /locus_tag="VFV26_08935"
     CDS             complement(98..1060)
                     /locus_tag="VFV26_08935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846330.1"
                     /translation="MDWIALKHALLSHLPVATGLLLPWALLASQRAGRGIRPWWTVCR
                     YLGWVGLLGLLAALASGLAAGRMHGLIPPGHLIPRPAAGMGPEAILFRHALGAAGAAL
                     LAVPVMWALNRARKDHQSLGFLALLLGLAWSAALLWTGHSGYALAHPDRVSRAASPQV
                     KAPEPPPPPVDPEAQAPLRALDYAALEPLHAEPVKSPAHGGRWIRAWANPAAAAAYRA
                     GQPLPTGSLVVLSSLEDRWGRPGTEAGPLYALDMKGDGPSLTFYWPRVPLDRRRETSG
                     EARAYWRGPDAHLDACRACHAGGMAEPAQRSRWRVPRIRQEKTE"
     gene            1152..1715
                     /gene="gmhA"
                     /locus_tag="VFV26_08940"
     CDS             1152..1715
                     /gene="gmhA"
                     /locus_tag="VFV26_08940"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEX4846331.1"
                     /translation="MKQTLLQHVEESVQLKQAFFARELDHILTQAEDMAERLKRGGRI
                     LVCGNGGSAADAQHLAAELSGRYLKERRALAGIALTTDTSALTAIGNDYGFDHIFSRQ
                     VEALGRPGDLLIGISTSGNSANIIRAVASARELGLRTLGLLGRDGGQLAGLVDDALVV
                     PSPVTARIQEVHQMVYHFWCEALDAQF"
     gene            1725..2456
                     /locus_tag="VFV26_08945"
     CDS             1725..2456
                     /locus_tag="VFV26_08945"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEX4846332.1"
                     /translation="MNAAAGLLVLALLGQPPRTYYWRDANGQTHITNTPPPAEAEVLE
                     PPPPPAVERGRGGHRVQPIRQSQRQAGSPVVLSPAQKQAWEALDQHLAKARAAGDTRT
                     LEAVADSLIHDCLWGNGLWAMPVLPFLSLVLMGLMGWWLALGLNPGYRNPVVGGFLVL
                     GLAFGHLLLNIFLYHPQSARLRQNLELLERHMGDRAPRPEHRAQLEQRYQALEQAAEP
                     THAPWQFPNKVESLRKTVKQVMVDP"
     gene            2446..3636
                     /locus_tag="VFV26_08950"
     CDS             2446..3636
                     /locus_tag="VFV26_08950"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen-III oxidase family protein"
                     /protein_id="HEX4846333.1"
                     /translation="MIPELPRRLAGRLPELRIAAQAEPLGLYLHIPFCLDRCTYCSFA
                     TTRDRSLQPGATARLIAQVRTWGAALERPALDTLYLGGGTPSLLSSLELADLTGAIRE
                     AFDLGSLVEATFEANPGTVDLAWLQGARDLGWDRASLGVQALDDGLLGRLGRIHGAAQ
                     ALEALDLAGQAGFRRRSADLMVGIPGQSLSKVIEDARTLAATGIDHLSVYLLDLDKAC
                     PLRAEIDAGRLALPSEDEVADVFEALQDELPRLGLAPYEISNYGRPGGESIHNTRYWE
                     RRPYLGLGPSAASQLGGFRWTESGLIAAWTEGRGDLDIQELDAAEELAEIPLLGLRLH
                     RGLDWGALRRKAEALNLRPLCDAWEARLRGLAREGLTVWEDDRVCLSPRGMLMSNGIL
                     QMFA"
     gene            3687..4574
                     /locus_tag="VFV26_08955"
     CDS             3687..4574
                     /locus_tag="VFV26_08955"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4846334.1"
                     /translation="MPYLGESAALLTSLCWSLNSVCFTVAGRRVGSTSVNLLRLLMAW
                     TLLMLLHLGLFGSPFPFQAGGTRLGWLGVSGLIGFALGDAVLFEAFVLIGARLAMLLM
                     TLSPLFSALLAWLFLGQDMGLPKVAAMALTLAGIAWVVWGGGDHEDHPHLWRGVLLGV
                     GGALGQSVGLVFSMKGLAGGFSPISANLIRVSAGVVALLLYFGATGRLRGALAGLRDA
                     RATAFIGLGAVTGPVLGVVLSLVAIARAPMGVAATLMSLSPVILLPVSHFGFKEKVGG
                     HAILGTLLALAGAAALFFV"
     gene            4762..>5664
                     /gene="pip"
                     /locus_tag="VFV26_08960"
     CDS             4762..>5664
                     /gene="pip"
                     /locus_tag="VFV26_08960"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX4846335.1"
                     /translation="MPLRKDPVSWLYPPVEPFKVHRLKVSDLHELHVEESGNPQGKPV
                     IFLHGGPGGGTSPKHRRYFDPAAYRIILFDQRGCGQSTPYAEVRENTTWDLVADIERI
                     REHLGIGRWMVFGGSWGATLGLAYAEKHPERVTELILRGIFLLRQREVDWLYQEGASR
                     VFPDAWEPYRDAIPETERGDFLQAYAKRLLSEDPALNLPAAKAWSIWEGATSKLIPDP
                     DFIASYGDEATTLAFARIECHYFLNRGWMSEAQLLSDAPKLKGIPGAIIQGRYDMVCP
                     IESAWALSKAWPEGDLVIVPDAGHS"
BASE COUNT          818 a         2102 c         1899 g          845 t
ORIGIN      
        1 ggcctcgcag gacctgcttc ggacgctccg tcagcgcatc gacctggagg aagcgcgcct
       61 cttccccctg gtggaacgcg cctagccgcg tcccaggcta ttccgtcttc tcctgccgga
      121 tccgcggcac ccgccagcgg ctgcgctggg ccggctccgc catgcccccg gcgtggcagg
      181 cgcggcaggc atccaggtgg gcatccggcc cccgccagta ggcccgggcc tcgccactgg
      241 tttcacgccg ccggtccagg ggaacccgag gccagtagaa agtgagcgaa gggccatcgc
      301 ccttcatgtc cagcgcgtac aggggcccgg cctcggtgcc gggccggccc cagcggtcct
      361 ccaggctgct cagcaccacc agcgatcccg tgggcagggg ctggccagcc cggtaggccg
      421 cggcggcggc cgggttggcc caggcgcgga tccaccgtcc gccatgggcc ggcgatttca
      481 ccggctcggc gtggaggggt tccagcgccg cgtaatccag ggcccggagg ggggcctgcg
      541 cctcgggatc cacgggaggc gggggcggtt cgggggcctt cacctgggga gatgcggccc
      601 gggatacccg gtccggatgg gccaaggcgt acccgctgtg gccggtccac agcagggcgg
      661 ccgaccaggc gagacccagc agcagggcga ggaagcccag gctctggtgg tccttccggg
      721 cgcggttcag ggcccacatg acaggcacgg cgagcagtgc ggcgcccgcg gcaccgagcg
      781 catggcggaa caggatggct tcaggcccca tgcccgcggc aggccttgga atgagatgcc
      841 ccggtgggat cagcccgtgc atccgtcccg cggcgagacc gctggccagg gccgccagca
      901 ggcccagcag gcccacccag cccaggtagc ggcacacggt ccaccagggg cggatgccgc
      961 gcccggcccg ctgcgacgcg agcagggccc agggcagcag cagtcccgtg gccaccggga
     1021 ggtgggacag aagggcatgt ttaagggcaa tccagtccat gggacccacg ctttgtgaag
     1081 aggctcgtca cctcgcagtc tgccagggcc cggtgaatcc tgggagggga tttcctgtca
     1141 caatctgccg catgaaacaa acgctcctcc agcatgtcga agaatcggtc cagctgaagc
     1201 aggccttctt cgcccgggaa ctggaccaca tccttaccca ggccgaggac atggccgagc
     1261 ggctgaaacg agggggccgg atcctcgtct gcggcaacgg gggcagcgcc gccgacgccc
     1321 agcacctggc cgccgagctg agcggccgct acctgaagga gcgccgcgcc ctggcgggca
     1381 ttgccctcac caccgacacc tcggccctga cggccatcgg caacgactat ggcttcgacc
     1441 acatcttctc ccggcaggtg gaagccctgg ggcgcccggg cgacctgctc atcggcatca
     1501 gcaccagcgg caacagcgcc aacatcatcc gcgccgtggc ctccgccagg gagctgggcc
     1561 tgcgcaccct gggcctgctg ggccgggatg gggggcagct ggcgggcctg gtggacgacg
     1621 ccctggtggt gccctccccg gtgacggccc gcatccagga agtccatcag atggtctacc
     1681 acttctggtg tgaggccctc gatgcccagt tctgaggccg gacagtgaac gcagccgccg
     1741 gcttgctggt tctggccctc ctcggccagc cgccccgcac ctactattgg cgcgatgcca
     1801 acggccagac ccacatcacc aacaccccgc ccccggcgga agccgaagtc ctggagcccc
     1861 cgcccccgcc ggccgtggag cgcggccgcg gcggacaccg cgtccagccc atccgccaga
     1921 gccagcgcca ggcaggcagc cctgtggtgc tcagccccgc ccagaagcag gcctgggagg
     1981 ccctggacca gcatctggcc aaggcccgcg ccgccgggga cacccgcacc ctggaggccg
     2041 tggcggattc gctcatccac gattgcctgt ggggcaacgg cctttgggcc atgcccgtgc
     2101 ttcccttcct gtcgctggtg ctcatggggc tcatgggctg gtggctggcc ctcggattga
     2161 atcccggcta ccggaatccc gtggtgggcg gcttcctcgt gctggggctc gccttcgggc
     2221 atctgctgct gaacatcttc ctctaccacc cccagtcggc ccggctccgg cagaacctcg
     2281 agctgctgga acgccacatg ggcgaccggg ccccccggcc cgagcaccgc gcccagctgg
     2341 agcagcgcta tcaggccctg gagcaggccg ccgagccaac ccacgcgccc tggcaattcc
     2401 cgaacaaggt ggagtctctc cgcaagacgg tgaaacaggt gatggttgat ccctgagctt
     2461 ccgcgccgcc tcgcggggag gctgcctgag ctcaggatcg ccgcccaggc ggagcccctg
     2521 ggcctctacc tccacatccc cttctgcctg gaccgctgca cctactgctc cttcgccacc
     2581 acccgggacc gcagcctcca gcccggggcc acggcccgcc tcatcgccca ggtgcgcacc
     2641 tggggtgccg ccctggagcg gcccgccttg gacaccctct atcttggcgg cggcaccccc
     2701 tcgctgctgt ccagcctgga gctggcggac ctcaccgggg ccatccggga agccttcgac
     2761 ctgggctccc tggtcgaagc caccttcgag gcgaaccccg gcaccgtgga cctggcctgg
     2821 ctccagggcg cccgcgacct gggctgggat cgcgccagcc tgggggtgca ggccctggat
     2881 gacggcctgc tggggcggct gggccgcatc cacggcgcgg cccaggccct ggaagccctg
     2941 gacctcgccg gacaggccgg cttccgccgc cgcagcgccg acctcatggt gggcattcct
     3001 ggacagtcgc tgtccaaagt catcgaggat gcccggaccc tggcggccac gggcatcgac
     3061 cacctcagcg tctacctcct ggatctcgac aaggcctgcc ccctccgcgc cgagatcgac
     3121 gcggggcgcc tggcgctgcc ctcggaggac gaggtggccg atgtcttcga ggccctccag
     3181 gacgagctgc cccgcctggg gctggcgccc tacgagatca gcaactacgg gcggcccggc
     3241 ggggagtcca tccacaacac ccgctactgg gagcgccgtc cctacctggg tctggggccc
     3301 agcgccgcct cgcagctggg cggcttccgc tggaccgaaa gcggcctcat cgcggcctgg
     3361 accgagggcc gcggcgacct ggacatccag gagctggacg ccgccgagga actcgccgag
     3421 atccccctgc tgggcctgcg cctccaccgg ggcctggact ggggtgccct gcgaaggaag
     3481 gcggaggccc tgaacctgcg ccccctgtgc gatgcctggg aggcccgcct ccgcggcctg
     3541 gccagggagg ggctcacggt ctgggaggac gaccgggtgt gcctcagccc ccggggcatg
     3601 ctcatgagca acgggatcct gcagatgttc gcataacctc gtaacatgag gctttacccc
     3661 gcccacgggg aatgcctgga gcccccgtgc cctacctcgg cgaaagcgcc gccctgctca
     3721 cctcgctctg ctggtccctg aactccgtgt gcttcacggt ggcgggacgc cgggtgggct
     3781 ccacatccgt gaacctgctc cgcctgctca tggcctggac cctgctgatg ctgctgcacc
     3841 tgggcctgtt cggatcgccc tttcccttcc aggccggggg cacccgcctg ggctggctgg
     3901 gcgtctccgg cctcatcggc ttcgccctgg gcgatgcggt gctcttcgag gccttcgtcc
     3961 tcatcggcgc gcggctggcc atgctgctga tgaccctgtc gcccctcttc agcgccctgc
     4021 tggcctggct cttcctcgga caggacatgg gcctgccgaa ggtggccgcc atggccctca
     4081 ccctggcggg catcgcctgg gtggtgtggg gcggcggtga ccacgaggac cacccccacc
     4141 tctggcgcgg cgttctgctg ggcgtgggcg gcgccctggg ccagtccgtg ggcctcgtgt
     4201 tcagcatgaa ggggctggcc gggggcttct cgcccatctc cgccaacctc atccgcgtgt
     4261 ccgcgggcgt ggtggccctg ctgctctatt tcggcgccac cggccgcctg cggggcgccc
     4321 tggccggcct gcgggacgcc cgtgccacgg ccttcatcgg cctcggcgcc gtcacgggcc
     4381 ccgtgctggg tgtggtgctc tccctcgtgg ccatcgccag ggcccccatg ggcgtggcgg
     4441 ccacgctgat gtcgctgtcc cccgtgatcc tgctgcccgt ctcccacttc ggcttcaagg
     4501 agaaggtggg cggccatgcg atcctgggca ccctgctggc cctcgcgggc gccgcggcgt
     4561 tgttcttcgt gtagtcgatc gctgggttca aggataaaaa gatcaccacc aagacaccaa
     4621 gacaccaaga aaagcaaagg ggcagttctt ctcgatatcc acgctgcgga tgcgcgagac
     4681 aaacaggcac ttggtgccct tggtgtcttg gtggtgaaaa tggttttccc gtcttgaatc
     4741 atcgtggaac aggagccacc cgtgccgctt cgcaaggatc ccgtcagctg gctctatccg
     4801 ccggtcgagc ccttcaaggt ccaccgcctg aaggtgtcgg acctgcatga actccacgtg
     4861 gaggagagcg gcaaccccca gggcaagccc gtcatcttcc tccacggcgg gcccggcggc
     4921 ggcaccagcc ccaagcaccg gcggtacttc gacccggcgg cgtaccgcat catcctcttc
     4981 gaccagcggg gctgcggcca gagcacgccc tacgccgagg tgcgcgagaa caccacctgg
     5041 gacctggtgg cggacatcga gcgcatccgc gagcacctgg gcatcggccg ctggatggtc
     5101 ttcggcggct cctggggcgc gaccctgggg ctggcgtacg cggagaagca cccggagcgg
     5161 gtcacggagc tgatcctccg gggcatcttc ctgctgcgcc agcgcgaggt ggactggctc
     5221 taccaggagg gcgccagccg cgtcttcccc gacgcctggg agccctaccg cgacgccatt
     5281 cccgagaccg agcgcggcga cttcctccag gcctacgcca agcgcctgct cagcgaggac
     5341 ccggccctga acctgcccgc cgccaaggcc tggagcatct gggaaggcgc caccagcaag
     5401 ctcatccccg atcccgactt catcgcctcc tacggcgacg aggccaccac cctcgccttc
     5461 gcccgcatcg agtgccacta cttcctgaac aggggctgga tgagtgaagc ccagctgctg
     5521 agcgatgccc cgaagctcaa gggcattccc ggcgccatca tccagggccg ctacgacatg
     5581 gtctgcccca tcgaaagcgc ctgggccctc tcaaaggcct ggcccgaggg cgacctcgtc
     5641 atcgtccccg acgcgggcca cagc
//
LOCUS       DASUDT010000436         3779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_771532, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000436 DASUDT010000000
VERSION     DASUDT010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771532"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1652)
                     /locus_tag="VFV26_08965"
     CDS             complement(<1..1652)
                     /locus_tag="VFV26_08965"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX4846336.1"
                     /translation="MSNHLAGSLSPYLLQHAHNPVDWRPWGAEALALAKAEQKPIFLS
                     IGYSACHWCHVMERESFENPAVAEVLNAHFVSIKVDREERPDLDDLYMDAVQTLTGRG
                     GWPMSVWLTPDLEPFYGGTYFPPEPRGGMPGFISLLRRIAEVWREDRGGVVAQARNLT
                     VELERQAAVAPGEDLPSASLVGAALDQLRQSFDPRWGGFGPAPKFPQHLAVELILAGG
                     SATDRAMALRTLDAMWEGGMYDHLGGGFARYSVDGQWLVPHFEKMLYDNAQLAACYLT
                     AFQATGEPRYAQVARETLDYLLRDLRDPAGGFHSSEDADSEGEEGRFYAFTPAEVREA
                     LGEADGARFCLAFGITEAGNFEHGRSVVHRFSCPAGGDLPEDEDRLLREKLRVWRDRR
                     VRPAKDDKVLAAWNGLALSALARGFQVLGDPRYLEAATACAGFLRRELWRETRLLRVW
                     RRGQAHTPGFLEDSAAVLDGLVDLYEAGFDPAWLRWAEALAEGLLVRFLDPAEGGCFS
                     TEADQPDLVFRQKPGFDNALPSGNTLAARALLRLSRHLQREDL"
     gene            1756..3114
                     /gene="ffh"
                     /locus_tag="VFV26_08970"
     CDS             1756..3114
                     /gene="ffh"
                     /locus_tag="VFV26_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX4846337.1"
                     /translation="MFDSLTQKLSQAMKALRGQSKLTEANLEAVLREVRMALLEADVH
                     VSVARTFLQRVKEKALGAEVMQGLNPAQAFIDIVHRELVEIMGGQAPEHPLAFASKPP
                     TVVMMVGLQGAGKTTTCGKLAVFLKKLGRSPLLVPADVYRPAAIEQLHVVAKDAGVPS
                     FRTEEKDPVAICAAALAEAKLKGWDTVILDTAGRLHLDETLMEELARIKTATSPDEIL
                     FVADAMTGQDAVRSATAFHEKLGITGVVLTKTDGDTRGGAAFSIKQATGQPLKFVGEG
                     EKLEDFQRFHPDRMAQRILGMGDVLSLIEHAKDKLDEKEAEVMAKRLAKNQFTLEDMR
                     KQFQQVQRLGSMNKILGMLPGLGQMKDQLASVATDKRIKHLEAIINSMTPAERANHNL
                     LDGKRKRRIAAGCGRPVHEINQLLKQFMETKKMMGQMNDPKFMARMQRMAKMGGGPNL
                     PF"
     gene            3125..>3779
                     /locus_tag="VFV26_08975"
     CDS             3125..>3779
                     /locus_tag="VFV26_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846338.1"
                     /translation="MANLRPLFPPHTGMILGVALSLGLAGTWMWRSSPQPSGIVRVLM
                     IAPEPTGQPDIDLGLETLIQDHFEVLAGATVTHAKAVPVPAELRKLPADLTLFRFQGR
                     RDGLRLALATMWTTPARLLAGHPWNHQTLPFMEPGPALEAWVAHWPLDRRHRIRTDLH
                     PQAPERFWDLLQAMAVRDDHAALDRLAATQALAEAEPRCATAWATLGDHLYRCLWVDP
                     "
BASE COUNT          624 a         1364 c         1258 g          533 t
ORIGIN      
        1 aggtcctccc gctggaggtg ccgcgacagg cgcaggaggg cccgcgccgc cagcgtgttc
       61 ccactcggca gggcgttgtc gaagcccggc ttctgccgga agaccaggtc cggctgatcc
      121 gcctcggtgc tgaagcatcc gccctcggcg ggatccagga agcggaccag caggccctcg
      181 gccagagcct cggcccagcg cagccaggcc gggtcgaaac ccgcctcgta gaggtccacc
      241 agtccgtcca gcaccgcggc gctgtcctcc aggaaccccg gcgtatgggc ctgcccccgg
      301 cgccagaccc tcagcagccg cgtctcccgc cagagctccc ggcggaggaa cccggcgcag
      361 gccgtggccg cctccagata gcggggatcc cccagcacct ggaatccccg ggccagggcc
      421 gacagggcca ggccgttcca ggcggccagc accttgtcgt ccttggccgg acgcacgcgg
      481 cggtcccgcc agacccgcag cttctcccgg aggaggcggt cctcgtcctc cggcagatcc
      541 ccgcccgccg gacaggagaa ccggtggacc acgctgcggc cgtgctcgaa attccccgcc
      601 tccgtgatgc caaaggccag acagaagcgg gcgccatcag cctcgcccag ggcctcacgc
      661 acctcggcgg gggtgaaggc gtagaacctc ccctcctcgc cttcgctgtc cgcgtcctcg
      721 ctggaatgga agccgcccgc ggggtcccgc agatcccgca gcaggtagtc cagggtctcc
      781 cgggccacct gggcgtagcg cggctctccc gtggcctgga aggccgtcag gtagcaggcc
      841 gccagctggg cgttgtcgta gagcatcttt tcgaagtggg gcaccagcca ctggccatcc
      901 acgctgtagc gggcgaagcc gccgcccagg tggtcgtaca tgccgccctc ccacatggcg
      961 tcgagggtgc gcagcgccat ggcccgatcc gtcgccgagc ccccggccag gatcagctcc
     1021 accgccagat gctgggggaa tttcggggcc gggccgaagc cgccccagcg gggatcgaag
     1081 ctctgccgga gctgatcgag ggcggcgccg accagcgatg cgctgggcag gtcctcgccc
     1141 ggcgcgaccg ccgcctggcg ctccagctcc accgtgaggt tgcgggcctg ggccaccacc
     1201 ccgccccgat cctcccgcca tacctcggcg atgcgccgca gcagggagat gaacccgggc
     1261 atgccccccc ggggttccgg cggaaagtag gtgccgccgt agaagggctc caggtccggc
     1321 gtgagccaca cgctcatggg ccagccgccc cggcccgtca gggtctgcac cgcgtccatg
     1381 tagaggtcgt ccaggtcggg ccgctcctcc cggtccacct tgatgctcac gaagtgggcg
     1441 ttgagcacct cggccacggc cggattctcg aagctctccc gctccatgac gtggcaccag
     1501 tgacaggcgc tgtagccgat gctgaggaag atgggcttct gctcggcctt ggccagggcc
     1561 agggcctcgg cgccccaggg gcgccaatcc acgggattgt gggcgtgctg gagcaggtag
     1621 ggactgaggc ttccggccag atggttcgac atatctgact ccattggtca ggattatgcc
     1681 cgaggttccc tttcccgaca ggagaaagcc cttcccggcc ggtagaatgg atctttcgtg
     1741 ccgatccgga gtcccatgtt cgacagcctt acccagaagc tcagccaggc catgaaggcc
     1801 ctccggggcc agtccaagct gacggaagcc aacctcgaag ccgtgctgcg cgaagtccgc
     1861 atggccctcc tggaagcgga cgtccacgtg agcgtggccc gcaccttcct ccagcgggtg
     1921 aaggagaagg ccctgggcgc cgaggtcatg cagggcctca accccgccca ggccttcatc
     1981 gacatcgtcc accgcgagct ggtggagatc atgggcggcc aggcgccgga gcatcccctc
     2041 gccttcgcgt ccaagccgcc gacggtggtg atgatggtgg gcctccaggg cgcgggcaag
     2101 accaccacct gcggcaagct ggcggtgttc ctcaagaagc tgggccgctc gcccctgctc
     2161 gtgcctgcgg acgtctaccg cccggcggcc atcgagcagc tgcacgtggt ggccaaggat
     2221 gccggcgtgc cctccttccg caccgaggag aaggatcccg tggccatctg cgccgcggcc
     2281 ctggccgagg cgaagctgaa gggctgggac acggtcatcc tcgacaccgc gggccgcctg
     2341 catctcgacg aaacgctgat ggaggagctg gcccgcatca agacggccac ctcccccgac
     2401 gagatcctct tcgtggccga tgccatgaca ggccaggacg cggtccgcag cgccacggcc
     2461 ttccacgaga agctgggcat caccggcgtg gtgctcacca agaccgacgg cgacacccgc
     2521 ggcggcgcgg ccttcagcat caagcaggcc acgggccagc cgctgaagtt cgtgggcgag
     2581 ggcgagaagc tggaggactt ccagcgcttc cacccggacc gcatggccca gcgcatcctg
     2641 ggcatgggcg atgtcctcag cctcatcgag cacgccaagg acaagctcga cgagaaggaa
     2701 gccgaggtca tggccaagcg cctggccaag aaccagttca cgctggagga catgcgcaag
     2761 cagttccagc aggtgcagcg cttgggctcc atgaacaaga tcctgggcat gctgccgggc
     2821 ctggggcaga tgaaggacca gctggcgagc gtggccacgg acaagcgcat caagcacctg
     2881 gaggccatca tcaactccat gacccccgcc gagcgcgcca accacaacct gctggacggc
     2941 aagcgcaagc ggcgcatcgc cgcgggttgc gggcgcccgg tccacgagat caaccagctg
     3001 ctcaagcagt tcatggaaac caagaagatg atggggcaga tgaacgatcc caaattcatg
     3061 gcccgcatgc agcgcatggc caagatgggc ggcggcccca accttccctt ctaggagcca
     3121 gcccgtggcg aacctccggc ccctgttccc gccccacacc gggatgatcc tgggggtggc
     3181 gctgagccta ggactggcgg gaacctggat gtggcggtca tctccgcagc catccgggat
     3241 cgtgagggtg ctcatgatcg cccccgaacc cacggggcag cccgatatcg acctcgggct
     3301 ggaaaccctg atccaggacc acttcgaggt gctggccggg gccaccgtca cccacgcgaa
     3361 ggcggttccg gttcccgcgg agttgcggaa gcttcccgcg gatctgacgc tgtttcgctt
     3421 ccaggggcgc cgggacggcc tgcgcctggc cctggccacc atgtggacca caccggccag
     3481 gctgctggcg ggccacccct ggaaccacca gacgctgccc ttcatggagc ccggcccagc
     3541 cctggaggcc tgggtggccc actggccctt ggatcggcgc caccggatcc gcaccgatct
     3601 ccaccctcag gcccccgagc gattctggga tctgctccag gccatggctg tccgggacga
     3661 tcatgcggcc ctggaccgtc tggcggcgac tcaggcgctg gccgaagcgg agccccggtg
     3721 cgccacggcc tgggccaccc tgggcgacca tctctaccgc tgcctgtggg tggatcccg
//
LOCUS       DASUDT010000437         3567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_749432, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000437 DASUDT010000000
VERSION     DASUDT010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749432"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1161
                     /gene="prfB"
                     /locus_tag="VFV26_08980"
     CDS             55..1161
                     /gene="prfB"
                     /locus_tag="VFV26_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEX4846339.1"
                     /translation="MDFETLVRAKNELEPRVRQLVAHLDPERKALELEQIEERTAVPG
                     FWDDPDAAKPLLQKRGTISNDIALAKRLSGGIEDLETGLELAKEDGDMLVEAEAVEGD
                     LRKAVEDAELRMMLSGDLDNNHAIVAIAPGAGGTESQDWAAMLLRMYLRFCESKGWAT
                     EMIDYQDGEEAGIKGATFIVDAPFSYGYLRAEAGVHRLVRISPFDSAKRRHTSFAAVY
                     VSPELDDTINVDIPEKDLKIDVFRASGAGGQHVNRTESAVRFTHLPTGIVVSCQNERS
                     QIKNRATALKVLQGRLYELEQRKFLDKVAAASGDKADVAWGSQIRSYVLQPYQMVKDH
                     RTGAETSQTQKVLDGDIDVFIRTQLLAKSLKTEG"
     gene            complement(1488..1994)
                     /locus_tag="VFV26_08985"
     CDS             complement(1488..1994)
                     /locus_tag="VFV26_08985"
                     /inference="COORDINATES: protein motif:HMM:NF042755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6677 family protein"
                     /protein_id="HEX4846340.1"
                     /translation="MSESTPAPVLRLPMPLRHKKAIKAAWKPLLLQWLVPGAGYWVVG
                     EKGRAKAFFGVWVAFCVLGALQMQFGAVDGVKGGIFVPVQGAWLPTLGALGTLGIGPL
                     YGAFAWAFGGAGTEPVRTLTQEYGATYVMVAGLLNWLCCFDLWDRITGRWVFRLPKDE
                     QEKIARGE"
     gene            2144..2650
                     /locus_tag="VFV26_08990"
     CDS             2144..2650
                     /locus_tag="VFV26_08990"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX4846341.1"
                     /translation="MNRAFVKDPDETGGPEAPPERPQSPHTNYVTPAGMRKLQALLGE
                     LKARRDRLLDEGKQASPQELALVQRDLRYYEERLRRAVPVAPGSGSPDRVHFGAVVDI
                     RDESGAIETVTIVGEDEADAALGRISWVSPLAKALLNAEPGELVRWRRPAGPQELEIV
                     GIREGDSG"
     gene            complement(2788..3054)
                     /gene="rpsR"
                     /locus_tag="VFV26_08995"
     CDS             complement(2788..3054)
                     /gene="rpsR"
                     /locus_tag="VFV26_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEX4846342.1"
                     /translation="MKRRADAKKGKPKKKKAFGGRRAKFCKFCVEKSLMIDYKDVKTL
                     QAFTPERGKVLPRRTSGVCAVHQRALVEAIKRARNIALLPFATD"
     gene            complement(3051..3440)
                     /gene="rpsF"
                     /locus_tag="VFV26_09000"
     CDS             complement(3051..3440)
                     /gene="rpsF"
                     /locus_tag="VFV26_09000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEX4846343.1"
                     /translation="MRHYETIFIASPTLTDEQSDELVKQFEGIIAEQGGELLKTDKWG
                     RKKLAYEVQKFSEGYYTLFEMNAGPDLIAELERRFRNHDSVIKYLSVRMDEAEKAAGR
                     AKQRIEREAKRKAQAGIKDRAPEEVVG"
BASE COUNT          658 a         1143 c         1193 g          573 t
ORIGIN      
        1 tcgaaggttc cccctgcctc gacaccggca gccgggggct gggagacgcg gacgatggat
       61 ttcgagaccc tggtgcgggc caagaacgaa ctggagcccc gggtccggca gctggtcgcg
      121 cacctggatc cggaacgcaa agccctggaa ctggaacaga tcgaggaacg gaccgccgtg
      181 ccgggcttct gggatgatcc cgacgcggcg aagcccctgc tccagaagcg gggcaccatc
      241 agcaacgaca tcgccctggc caagcgcctg agcggcggca tcgaggacct ggagaccggg
      301 ctggagctgg ccaaggaaga cggggacatg ctggtcgagg ccgaggcggt ggagggcgac
      361 cttcgcaagg ccgtggaaga tgccgagctg cgcatgatgc tcagcggcga tctggacaac
      421 aaccacgcca tcgtggccat cgccccgggc gccgggggca ccgagagtca ggactgggcc
      481 gccatgctgc tgcgcatgta cctgcgcttc tgcgaatcca agggctgggc cacggagatg
      541 atcgactacc aggatgggga ggaggccggc atcaagggcg ccaccttcat tgtggacgcg
      601 cccttctcct acggttacct gcgggccgag gccggcgtcc accgcctggt gcgcatcagc
      661 cccttcgatt ccgccaagcg ccgccatacg agctttgctg ccgtgtacgt gagcccggag
      721 ctggacgaca ccatcaacgt cgacatcccc gaaaaggacc tcaagatcga tgtcttccgc
      781 gccagcggcg ccggcggcca gcacgtgaac cgcacggagt ccgccgtgcg cttcacccac
      841 ctgcccacgg gcatcgtggt cagctgccag aacgagcgca gccagatcaa gaaccgcgcg
      901 acggcgctca aagtcctgca gggccggttg tacgaactcg agcagcgcaa gttcctggac
      961 aaggtggccg cggccagcgg cgacaaggcc gacgtggcct ggggcagcca gatccgcagc
     1021 tacgtcctcc agccctacca gatggtcaag gaccaccgca ccggcgccga gaccagccag
     1081 acccagaagg tgctggacgg ggacatcgat gtgttcatcc gcacccagct gctggcgaag
     1141 tcgctcaaga ccgagggttg aggcgggctt caagaaaagc gatgacagga ttaacaggat
     1201 caaaagcagg atgaacagga tgagaacgaa atgatgcttt tgaatcctgt taatccgatc
     1261 cttccatcct gttaatcctg tccatgcctt tcgttggatc tcactcgccc cgggcgatct
     1321 ggcgaagtcc ctcaagaccg agggctgagg cgggcttcaa gaaaagcgat gacaggatta
     1381 acaggatcaa aagcaggatg aacaggatga gaacaaaatg atgtttttga atcctgttaa
     1441 tccaatcctt ccatcctgtt aatcctgtcc gtgcctttcg ttggatctca ctcgccccgg
     1501 gcgatcttct cctgttcgtc cttggggagg cggaagaccc agcggcccgt gatgcggtcc
     1561 cagagatcga agcagcagag ccagttcagc aggccggcaa ccatcacgta ggtggccccg
     1621 tactcctggg tgagcgtgcg cacgggctcc gtgcctgccc cgccgaaggc ccaggcgaag
     1681 gcgccgtaga gcgggccgat gcccagagtg cccagggcgc cgagggtggg cagccaggcg
     1741 ccctgcaccg gcacgaagat gccgcccttc acgccatcca cggccccgaa ctgcatctgc
     1801 agggcgccga gcacgcagaa cgcgacccac accccgaaga aggccttggc gcggcccttc
     1861 tccccgacga cccagtagcc ggcgcccggc accagccact ggagcagcag cggtttccag
     1921 gcggccttga tggccttctt gtggcggagg ggcatgggga gcctcaggac cggggcgggg
     1981 gtggattcgg acatgggtcc agattaaccc aggccaacgg ggaaggggct tgatctgctc
     2041 cacccggcgc ccgcaccatg gggattccgt cctgagcacc ctcttgaatt cctgccggga
     2101 gggtaccggg gcctctcctc ccaccgaacc aggggccgcc accgtgaatc gagccttcgt
     2161 caaggatccg gacgaaacgg gaggcccgga ggctccgccc gagcgccccc aaagcccgca
     2221 cacgaactac gtgacgcctg cgggcatgcg gaagctgcag gcccttctgg gcgagttgaa
     2281 ggcgcgtcgg gaccggctgc tcgacgaggg gaagcaggcc agcccgcagg agctggctct
     2341 ggtccagcgg gacctgcgct actacgagga gcggctgagg cgggccgtgc cggtggcccc
     2401 gggcagcgga tcaccggacc gggtccactt cggcgccgtc gtggacatcc gcgacgagtc
     2461 cggcgccatc gagaccgtga ccatcgtcgg cgaggacgag gccgatgcgg ccctgggccg
     2521 gatcagctgg gtgtcccccc tggcgaaggc gctcctgaat gccgaaccgg gcgagctggt
     2581 gcggtggcgc cgacctgccg ggccgcagga actggagatc gtcggcatcc gcgaaggcga
     2641 ttccggctga ggaggctttc gtatggaaac tcctgcggag ccttcggagc ggggccccgc
     2701 cggcccgagt gcgcgcggag cgcgcccgca acagcgcgaa ggccgcccga gggcggcctt
     2761 catcgttcgt cagggacggg tggaaaccta atccgtggcg aagggcagca gcgcgatgtt
     2821 gcgggcgcgc ttgatggctt ccaccagggc gcgctggtga accgcgcaaa caccgctggt
     2881 gcggcggggc agcaccttgc cgcgctcggg ggtgaaggcc tggagggtct tcacgtcctt
     2941 gtagtcgatc atgagggact tctcgacgca gaacttgcag aacttcgcgc gtcgtccccc
     3001 aaaagccttc ttcttcttgg gcttgccctt cttggcgtca gctcggcgct tcatccgacc
     3061 acctcctcag gtgcgcgatc cttgataccg gcctgggcct tgcgcttggc ctcgcgctcg
     3121 atgcgctgct tggcgcggcc cgcggccttc tcggcctcgt ccatgcggac gctcaggtac
     3181 ttgatgaccg aatcgtggtt gcggaagcgg cgctccagct cggcgatgag gtcggggccc
     3241 gcgttcattt cgaagagcgt gtagtagcct tcgctgaact tctggacttc gtaggccagc
     3301 ttcttgcggc cccacttgtc ggtcttgagc agctcgccac cctgctcggc aatgatcccc
     3361 tcgaactgct tgacgagctc atcgctctgc tcgtccgtca gcgtggggga ggcgatgaag
     3421 atggtctcgt agtgacgcat ctgtcctcct tgtggatgtg aagcccccta tggattccag
     3481 ggagcaagga agagccctcc agcggaggac gcgaaggggt agtttcgcgt ggaaagggcc
     3541 tgagatcaat gaaaagtctg gaatccc
//
LOCUS       DASUDT010000438         3670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_42886, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000438 DASUDT010000000
VERSION     DASUDT010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42886"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1100
                     /gene="obgE"
                     /locus_tag="VFV26_09005"
     CDS             <1..1100
                     /gene="obgE"
                     /locus_tag="VFV26_09005"
                     /inference="COORDINATES: protein motif:HMM:NF008955.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX4846344.1"
                     /translation="RTPMFLDHVQLRVAAGHGGAGAMSFRREKFAPEGGPDGGDGGKG
                     GSIFLKANRALNTLNPYRSKREFTAERGRQGEGCMRHGKDGLDVVLEVPLGTVVKDGE
                     TGEVLAELLSHGEDVCVARGGRGGLGNTNFKSSTNRTPRHHQPGEDGEERALDLELKL
                     IADVGLVGFPNAGKSTLVSCLSAARPKIADYPFTTLEPQLGVVSLDRFGGDMLDSWVI
                     ADIPGLIEGAAGGAGLGIQFLRHVERTRVLLHLVDLSDPITEPAEAVRIIEGEVMAFS
                     PVLAAKPRWLVATKLDALQDEDRRAAFEALCADRGQKPVFISGVTGEGLRDLAFAVNA
                     MLKGGPGFAIEEGEDWDTPRPDRDGTAGELR"
     gene            1097..1714
                     /gene="nadD"
                     /locus_tag="VFV26_09010"
     CDS             1097..1714
                     /gene="nadD"
                     /locus_tag="VFV26_09010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEX4846345.1"
                     /translation="MTRIGLLGGAFNPPHNGHLKLARLALEHLGLDELRFVPTAVSPH
                     KPDPGGPSAEARLHLLAGALQAFDPRCRVERLEVDRGGASYTVDTLEALTAREPGAAW
                     ILVMGSDQLPGLSRWRRPERVFQLASAAVALRPGAAADLPSVSGLRPAATWSGGPGEL
                     VWLPSTELDLASTELRLRLAADPAHDPEGIPDQVMAAIRSENLYR"
     gene            1732..2106
                     /gene="rsfS"
                     /locus_tag="VFV26_09015"
     CDS             1732..2106
                     /gene="rsfS"
                     /locus_tag="VFV26_09015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX4846346.1"
                     /translation="MTLDSRLATVVEAARSKKAFRIRLVDVKDIASFTDVFAFMSGGS
                     DRQNRAIADAVEDALKLTGERPISREGESNANWVLLDYGNLVVHVMDEETRRHYNLEG
                     LWSAGRELELPAEVHPASDARP"
     gene            2119..3372
                     /locus_tag="VFV26_09020"
     CDS             2119..3372
                     /locus_tag="VFV26_09020"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEX4846347.1"
                     /translation="MPTNQTNAFEAMQARLRVASQLYGLDDALFKVFMAPSRSMIVSL
                     PVLMDNGQWEVFTGYRVQHNIARGPAKGGIRYDLNVSLDEVKALAAWMTWKCAVVDVP
                     FGGGKGGIVCDPSRLSLGEKERLTRRYIAEIMDILGPDRDVPAPDMGTDAQTMAWVLD
                     TYSMHVRRTENAIVTGKPLGLGGSLGRNEATGRGILITAREAMQRLGKPLAGATVAVQ
                     GFGNVGSQAARLLHEAGARVVAIGDIQGAIKNDRGLDIHALLKHVAETRTVAGFKGAE
                     PLDPTALLTYSVDILVPAASENQITEANAAQVRAKVIVEGANGPTTPEADPILLDHGV
                     LVVPDILANVGGVTVSYFEWVQNRQGFYWREREVNERLVDYMTHAFQATFATTDKYKT
                     NPRIGAYILALDRVAQAMKYRGFYA"
     gene            3456..>3670
                     /locus_tag="VFV26_09025"
     CDS             3456..>3670
                     /locus_tag="VFV26_09025"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX4846348.1"
                     /translation="MARTRFQDAGDGLPLKALPAAALRAVLSEGYSGRQFRRDLTAGF
                     LVGIVALPLAMALAIAVGVPPQQGLYTA"
BASE COUNT          575 a         1378 c         1184 g          533 t
ORIGIN      
        1 atcggacccc catgttcctt gaccacgtcc agctccgcgt cgctgccggc cacggtggcg
       61 ccggcgccat gagcttccgc cgcgagaagt tcgcccccga gggcggccct gatggcggtg
      121 acggcggcaa agggggctcg atcttcctga aggccaaccg cgccctgaac accctgaatc
      181 cctaccgcag caagcgtgaa ttcaccgccg agcgcgggcg ccagggcgag ggctgcatgc
      241 gccacggcaa ggacggcctg gacgtggtgc tggaagtgcc cctgggcacc gtcgtgaagg
      301 acggcgaaac cggcgaggtg ctggccgaac tcctgtccca cggcgaggat gtctgcgtcg
      361 cccgcggcgg ccggggcggc ctgggcaaca cgaatttcaa gagctccacc aaccgcaccc
      421 cgcgccacca ccagcctggc gaggacggtg aggaacgcgc tctcgatctc gagctgaagc
      481 tcatcgcgga cgtgggcctg gtgggctttc ccaatgccgg caagagcacc ctggtgagct
      541 gcctcagcgc cgcccggccc aagatcgccg actacccctt caccaccctg gagccccagc
      601 tcggcgtggt gagcctcgac cgcttcggcg gcgacatgct cgacagctgg gtcatcgccg
      661 atatcccggg cctcatcgaa ggcgccgccg ggggcgcggg cctgggcatc cagttcctcc
      721 gccacgtgga gcgcacccgc gtcctccttc atctggtgga cctgtcggac cccatcaccg
      781 agcccgcgga ggccgtccgc atcatcgagg gtgaggtgat ggccttcagc cccgtgctgg
      841 ccgccaagcc ccgctggctc gtggccacca agctcgacgc cctccaggac gaggaccgcc
      901 gggccgcctt cgaagccctc tgcgccgacc gcggccagaa gcccgtcttc atctccggtg
      961 tcaccggcga gggactgcgc gatctggcct tcgccgtgaa cgcgatgctc aagggcggcc
     1021 ccggcttcgc catcgaggaa ggcgaggact gggacacccc acgcccagac cgcgacggga
     1081 ccgccggaga gctccggtga cacgcatagg gctgctcgga ggcgcgttca accctccgca
     1141 caacggccac ctcaagctgg cgcgcctggc cctggaacac ctgggcctcg acgagctccg
     1201 cttcgtgccc acggccgtca gcccccacaa gcccgatccc ggcggcccca gcgccgaagc
     1261 ccgcctgcac ctgctggccg gggccctgca ggccttcgat ccccgctgcc gggtggagcg
     1321 cctcgaagtg gaccgcggcg gcgccagcta caccgtggac acgctggaag ccctcaccgc
     1381 ccgcgaaccc ggggcggcct ggatcctcgt catgggcagc gaccagctgc cgggcctctc
     1441 ccgctggcgg cgcccggagc gggtcttcca gttggcctct gccgccgtgg ccctgcggcc
     1501 cggcgcggcg gcggacctcc cctccgtttc cggtctgcgc cctgccgcca cctggtccgg
     1561 cgggcccggc gagttggtct ggcttccctc cacggaactg gatctggcct ccacggagct
     1621 ccgcctccgc ctggcggcgg atcctgccca cgatcccgaa ggcatccccg accaagttat
     1681 ggctgccatc cgctctgaaa acctgtatcg ttagcctgct ctggagcacg catgaccctt
     1741 gattcccggc tcgcgactgt cgtcgaggcc gcccggtcca agaaagcctt ccgcatccgg
     1801 ctcgtggacg tgaaggacat cgccagcttc acggacgtct tcgccttcat gagcgggggc
     1861 agtgaccgcc agaaccgcgc catcgccgat gccgtcgagg atgccttgaa gctcaccggc
     1921 gaacgcccca tctcccggga aggcgagtcc aacgccaact gggttctcct cgattacggc
     1981 aacctggtcg tccacgtcat ggacgaggag acccggcgcc actacaacct cgaagggctc
     2041 tggagcgcag gccgcgagct ggaactgccc gcggaagtcc accccgcctc cgatgcccgt
     2101 ccgtaggagc tgacctccat gccgaccaat cagaccaatg ccttcgaggc catgcaggcc
     2161 cgcctccggg tcgcctccca gctctacggc ctggatgacg cccttttcaa ggtgttcatg
     2221 gcccccagcc gctccatgat cgtgagcctg cccgtgctca tggacaacgg ccagtgggag
     2281 gtcttcacgg gctatcgcgt gcagcacaac atcgcccgcg gccccgccaa gggcggcatc
     2341 cgctacgacc tgaacgtgag cctggacgag gtgaaggccc tggcggcctg gatgacctgg
     2401 aagtgcgccg tggtggacgt gcccttcggc ggcggcaagg gcggcatcgt ctgcgaccca
     2461 tcccgcctga gcctcggtga gaaggagcgc ctcacgcgcc gctacatcgc cgagatcatg
     2521 gacatcctcg gccccgaccg cgatgtgccg gccccggaca tgggcaccga cgcccagacc
     2581 atggcctggg tcctggacac ctactccatg cacgtgcgcc gcaccgagaa cgccatcgtc
     2641 accggcaagc ccctgggcct gggcggcagc ctgggccgca acgaggccac gggccgcggc
     2701 atcctcatca cggcccggga ggccatgcag cgcctgggca agcccctggc cggcgccacg
     2761 gtggccgtgc agggcttcgg caatgtgggc agccaggccg cacgcctgct gcacgaggcc
     2821 ggggcccgcg tcgtggccat cggcgacatc cagggcgcca tcaagaacga ccgcggcctg
     2881 gatatccacg cgctgctcaa gcatgtggct gaaaccagga ccgtcgccgg gttcaagggc
     2941 gccgagcccc tggatcccac cgccctcctc acctattccg tggacatcct cgtgcccgcc
     3001 gcgtcggaaa accagatcac ggaagccaac gcggcccagg tgcgggccaa ggtcatcgtg
     3061 gagggcgcca acggccccac cacgcccgag gccgatccca tcctgctgga ccatggcgtc
     3121 ctcgtggtgc ccgacatcct ggccaacgtg ggcggcgtca ccgtcagcta cttcgagtgg
     3181 gtgcagaacc ggcagggctt ctactggcgg gagcgcgagg tcaacgaacg gctggtggac
     3241 tacatgaccc acgccttcca ggccaccttc gccaccacgg acaagtacaa gaccaacccc
     3301 cgcatcggcg cctacatcct ggccctggac cgcgtggccc aggccatgaa gtaccgcgga
     3361 ttctacgcct aagagcgcct ggggaaactc cccggccgcg gcgttaggat ggaggtctgc
     3421 acgtccatca ctgaagcctc cgccggggat tttccatggc tcgcacgcgc ttccaggatg
     3481 cgggggatgg tctcccgctg aaggcccttc ccgctgcggc cctgcgggcc gtgctgagcg
     3541 agggctattc cgggcgccag ttccgccggg acctcacggc gggcttcctg gtgggcatcg
     3601 tggccctgcc cctggccatg gctctggcca tcgccgtggg cgtgccgccc cagcaggggc
     3661 tgtacaccgc
//
LOCUS       DASUDT010000439         6773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1036758, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000439 DASUDT010000000
VERSION     DASUDT010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 6773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6773
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036758"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VFV26_09030"
     CDS             complement(<1..1185)
                     /locus_tag="VFV26_09030"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4846349.1"
                     /translation="MTAEPSFREKYSFPASYWNANLTELFERAAYYSMASFIVIYLGR
                     LGLGDYWPSTLNGVLWFLVYFLPILSGTIADQIGFRRSLLLACVLLVGGYFLMGYPVW
                     FGGQTLALQAGKEVTAGMGVMAPVAAAIVLIGVGGSFVKPCIAGTVQRTHLGKATLAF
                     AIFYMVINIGSVFGRITAFFVRTKLGKLDTIFLVSMVAAVLAFLVVVLLYRDPESTVD
                     PAKPKRTIPEVFFGMFKVLGSGRFVMFLLVSSGFYFIYNQVYNVLPLYVKKTVELTPA
                     MDLYTMANPITIVLFQLLITRIFGKLPPIKSIIVGTVIIGLSMLINVAPLYMAGGVTA
                     KMWLPLGSLFVVLTVALIAFGELFASSRLYEYIGSLAPKGQEGLFLGYANLPMAIGSL
                     VGG"
     gene            complement(1235..1621)
                     /locus_tag="VFV26_09035"
     CDS             complement(1235..1621)
                     /locus_tag="VFV26_09035"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 family protein"
                     /protein_id="HEX4846350.1"
                     /translation="MAIRVVRLGTPRAPGEGLRIGTVRRPPRGVPKAEFASRDFYDVW
                     LPEAAPSEALVKEAQAASSDREWESFRKQYRKEMAEPGRARLLDLLAALSRQTELSVG
                     CYCEDESTCHRSVLRELLAERGAEIR"
     gene            complement(1872..3098)
                     /gene="glp"
                     /locus_tag="VFV26_09040"
     CDS             complement(1872..3098)
                     /gene="glp"
                     /locus_tag="VFV26_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX4846351.1"
                     /translation="MPTPAEALALILDRITPLPPRRLPLAEALGLAAGEDIRSAVQVP
                     PFTKSAMDGYAVRAADLAHASPEQPARLRVLGDLAAGATPDRPVAPGTAWRIMTGAPL
                     PEGADSVVPVEDTVRGEGWMEARSPLRKGIHIRLAGEDIQAGLALVAAGQALRPGDLG
                     VLAAVGLAAVPVHPRVRVAVLTTGDELVDASAKPGPGQIRDANIHAICAQVAACGAIP
                     VPFARVPDDRAALAAVLREAMQADAILTTGGISVGDYDFMKAMLEELGAERIFWKVAQ
                     KPGGPLGFWMLGPTPVFGIPGNPVAAMLMVEEYVRPALRRMMGFAKLHRPLAEAGLEG
                     GWTGKAGDPRTTFLRVVARREGECFQARLTGPQGSAILSSMLSANALAVIPAGTDRVE
                     PGGKVQLHLTELAEDH"
     gene            complement(3098..3541)
                     /locus_tag="VFV26_09045"
     CDS             complement(3098..3541)
                     /locus_tag="VFV26_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846352.1"
                     /translation="MDAITPDRPPRRALLQALCPPAPRRLPWARPVQLALRSLHIAAM
                     AMVVGALPFGADFQALRLPILLTLGSGILLFAIDLARDAAILTQGSGVAVLLKLALLG
                     AGVLQPSARLPWYLTATLVASIGSHMPGAWRHFSFTQWKVMRYPD"
     gene            3606..3953
                     /locus_tag="VFV26_09050"
     CDS             3606..3953
                     /locus_tag="VFV26_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846353.1"
                     /translation="MAKPASIRIRIASGEDIAMGQGKADLLEAIGQTGSISAAARQLD
                     MSYRKAWLMVDEMNQCFRSPVVLAAKGGSRGGGAQVTALGEEALARFRQIQAKASAAI
                     AAEVRAFRKKLLR"
     gene            4030..4863
                     /locus_tag="VFV26_09055"
     CDS             4030..4863
                     /locus_tag="VFV26_09055"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4846354.1"
                     /translation="MVRFAGWHWGLALSLALSAAAAPAAPPRGKAVILATTTSTQDSG
                     LLDELIPRFEKQTGYSVKTIAVGSGQAIAMGRRGEADVLLVHSPEAEKALVAEGSGLN
                     RRIVMHNHFILLGPAADPAGIRGKAAGPALQAIASAGAVFMSRGDNSGTHAQEKKLWA
                     AAGLRPEGSIWYQQTGLGMGQTLTIAAEKRAYTLSDRGTYLALRKRLGLEVLSEGDAA
                     LLNVYHVIEVNPARFSKVNAPGARAFADFLVSKDVQTLIKKYGISTHGAPLFFPDAGP
                     H"
     gene            5036..6667
                     /gene="pruA"
                     /locus_tag="VFV26_09060"
     CDS             5036..6667
                     /gene="pruA"
                     /locus_tag="VFV26_09060"
                     /EC_number="1.2.1.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR01236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006562 - proline catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamate gamma-semialdehyde dehydrogenase"
                     /protein_id="HEX4846355.1"
                     /translation="MSNAIFSLPESHSEPILSYAPGSKERALLKAELARQSALVLDIP
                     LIIGGKEVRTGRTQKAVCPHDHQHVLATFHEAGEAEVRMAIDAAMAAKKAWEATPWED
                     RAAIFHKMGSLISSKYRYILNAATMLGQSKSAYQAEIDSTCETADFFRFNAKFMEQIY
                     QQQPISDPHVWNRVHYRALEGFVFAVTPFNFTAIGANLATAPAIMGNTVVWKPASTSV
                     VSNYYLMQLFKEAGLPDGVINFIPGRGSMIGKIALEDRNFAGLHFTGSTGVFNSMWKT
                     ISGNLERYQSYPRIVGETGGKDYIFMHESGDAAETAAAIVRAGFEYQGQKCSACSRVY
                     IPASRWAEMKERLLALLAEIKMGDVRDFRNFFNAVIDEAAFDNTMKYIELARNAKDAQ
                     IIAGGKGDKSKGWFIEPTVILTTNPKFVTMEEEIFAPVVTIYVYDDAQLDATLKILDE
                     TSPYALTGAIFARDRYVINHLTDALANTAGNFYINDKPTGAVVGHQPFGGARASGTND
                     KAGSFLNLIRWTSPRTIKESFTPPRDLKFPFLEQE"
BASE COUNT         1179 a         2403 c         2214 g          977 t
ORIGIN      
        1 gccccccacc aggctgccga tggccatggg caagttggcg tagcccagga acaggccctc
       61 ctggcccttg ggcgccaggg agccgatgta ctcgtagagg cggctggagg cgaacagttc
      121 gccgaaggcg atgagggcca cggtcagcac cacgaagagg ctgcccaggg gaagccacat
      181 cttcgcggtc acgccgcccg ccatgtagag cggcgccacg ttgatgagca tggagaggcc
      241 gatgatcacg gtgcccacga tgatcgactt gatggggggc agcttgccga agatccgcgt
      301 gatgagcagc tggaacagca cgatggtgat ggggttggcc atggtgtaga gatccatggc
      361 cggcgtgagc tccacggtct tcttcacgta gagcggcagc acgttgtaga cctggttgta
      421 gatgaagtag aagccgctgc tcaccagcag gaacatgacg aagcggccgc tgcccagcac
      481 cttgaacatg ccgaagaaca cttcgggaat ggtgcgcttg ggcttggcgg gatccaccgt
      541 ggactcggga tcccggtaga gcagcaccac caccagaaag gccagcaccg ccgccaccat
      601 ggacacgagg aagatggtgt cgagcttgcc cagcttcgtg cggacgaaga aggccgtgat
      661 gcgcccgaag acgctgccga tgttgatgac catgtagaag atggcgaagg ccagcgtggc
      721 cttgcccagg tgggtgcgct gcaccgtgcc cgcgatgcag ggcttcacga aggagccgcc
      781 gaccccgatc agcacgatgg ccgccgccac cggcgccatc acgcccatgc ccgccgtgac
      841 ctccttgccc gcctgcagcg ccagggtctg tcccccgaac cacaccgggt agcccatgag
      901 gaagtagccg cccaccagca gcacgcaggc caggagcagg ctgcggcgga agccgatctg
      961 gtcggcgatg gtgccgctga ggatgggcag gaagtagacc aggaaccaga gcacgccgtt
     1021 gagcgtgctg ggccagtagt cgcccaggcc caggcgcccc aggtagatga cgatgaagct
     1081 cgccatcgaa tagtaggccg cccgctcgaa cagctcggtg aggttggcgt tccagtagct
     1141 ggcagggaac gagtacttct cgcggaaaga gggctcggcg gtcatggata cctcggaatg
     1201 ccaacagtgt gccatgagcc ccggtccggg ccgctcagcg gatttcggcc ccccgctccg
     1261 cgaggagctc ccgcagcacc gagcggtggc acgtcgactc gtcctcgcag tagcagccca
     1321 cggagagctc cgtctgccgc gacagggccg ccagcaggtc cagcaggcgc gcccgcccgg
     1381 gctcggccat ctccttgcgg tactgcttgc ggaagctctc ccactcccga tcactggacg
     1441 ccgcctgggc ctccttcacc agcgcctcgc tgggcgccgc ctccggcagc cacacgtcgt
     1501 agaaatcgcg cgacgcgaac tccgccttgg gcactccccg cggcgggcgg cgcacggtcc
     1561 cgatgcgcag cccctccccc ggcgcccgcg gcgtgcccag acgaaccacc cggatggcca
     1621 tggtgtcctc cttcatacca agtcgcgacc cgtgatagag atttaccact gagtcacgga
     1681 aaacacggag aaggcatgga tgcctccgcg ttcctccgcc atgggcaggc cggaggccgc
     1741 ttccggccac gccggaagcc acgggagacg ccgggtccgg atcccctcaa aaggatccga
     1801 acccggcgtc tcccgtgtgc ccatgctctg tgtctccgtg gtggatcctt tacgattgaa
     1861 tgcgaaccga atcagtgatc ttccgcgagt tccgtgaggt ggagctggac cttcccgccg
     1921 ggttccaccc gatccgtgcc agcgggaatc accgccaggg cgttggcgct cagcatggac
     1981 gacaggatgg cggacccctg cgggcccgtg agccgcgcct ggaagcactc cccttcgcgc
     2041 cgggccacca cgcgcaggaa ggtggtgcgg gggtcgccgg ccttgcccgt ccagccgccc
     2101 tccaggcccg cctcggccag gggccgatgg agcttcgcga agcccatcat gcgccgcagg
     2161 gccggccgca cgtattcctc caccatcagc atggcggcca cgggattgcc cgggatgccg
     2221 aagaccggcg tggggccgag catccagaag cctagcggcc cgcccggttt ctgggccacc
     2281 ttccagaaga tgcgctcggc gcccagctcc tccagcatgg ccttcatgaa gtcgtagtcc
     2341 cccacggaaa tccccccggt ggtgaggatg gcgtcggcct gcatggcctc ccgcagcacg
     2401 gcggccagcg cggcccggtc atccggcacc cgcgcgaagg ggaccgggat ggctccgcag
     2461 gccgccacct gggcacagat ggcgtggatg ttcgcatcgc ggatctgccc gggaccgggc
     2521 tttgcggacg cgtccaccag ctcgtcgccc gtggtgagca cggccacgcg gacccgcgga
     2581 tggaccggca cggcggcaag ccccacggcg gccagcacgc ccaggtcgcc gggccgcagc
     2641 gcctgacccg ccgccaccag cgccagcccc gcctggatgt cctcccccgc caggcggatg
     2701 tggatgccct tccgcagggg gctgcgggcc tccatccagc cctcgccgcg gaccgtgtcc
     2761 tccacgggca ccacggaatc cgcgccttcc ggcaacgggg cgccggtcat gatgcgccag
     2821 gcggtgccgg gagccacggg gcgatccggc gtggcccccg ccgcaaggtc ccccaggacc
     2881 cgcaggcggg cgggctgctc cggcgaggcg tgcgccaggt cggcggcccg caccgcgtag
     2941 ccgtccatgg cggatttggt gaagggcggc acctgcaccg ccgaccggat gtcctcgccg
     3001 gcggccaggc ccagggcctc cgccaaaggc agacgcctcg gcgggagggg cgtgatgcga
     3061 tcgaggatca gcgcgagcgc ttcggcgggt gtgggcatca atccgggtac ctcatgacct
     3121 tccactgggt gaaggagaaa tgccgccagg cccccggcat gtgggagccg atggaggcca
     3181 ccagggtggc ggtcaggtac cagggcagcc gggcggaggg ctgcagcacg ccagcgccca
     3241 gcagggccag cttcagcagc acggccacgc cgctgccctg ggtgaggatg gccgcgtccc
     3301 gcgccaggtc gatggcgaag agcaggatcc cgcttcccag ggtgagcagg atcggcaggc
     3361 gcagcgcctg gaaatccgcg ccgaagggga gcgcccccac caccatggcc atggccgcga
     3421 tgtggaggct gcgcagcgcc agctggacgg gccgcgccca ggggaggcga cggggcgccg
     3481 gggggcagag cgcctgaagg agggcccgac gcggggggcg gtccggggtg atggcatcca
     3541 tgcttccctt ctagcagagt ccggtggccg ctccctgtgc tgaaatgggc ccacccgagg
     3601 tttccatggc caagcccgcc tccatccgca tccgcatcgc ctccggggag gacatcgcca
     3661 tgggccaggg caaggccgac ctgctggagg ccatcgggca gaccggctcc atctccgcgg
     3721 cggcccggca gctggacatg agctaccgca aggcctggct catggtggac gagatgaacc
     3781 agtgcttccg gtcgcccgtg gtgctggcgg ccaagggcgg ctcccgcggc gggggcgccc
     3841 aggtgacggc cctgggcgaa gaggccctgg cccggttccg ccagatccag gccaaggcct
     3901 ccgccgccat cgcggcggag gtccgcgcct tccggaagaa gctgctccgc tgactggacg
     3961 cctgcccatc ccgcgccccc cctgtcgcaa tcgttatatc cctgcgaaac tatcgactcg
     4021 gagggcagca tggttcgatt cgcgggctgg cactgggggc tggcgctgag cctggccctg
     4081 tccgcggccg ccgcccccgc cgcgccgccc cgggggaagg ccgtcatcct ggccaccacc
     4141 accagcaccc aggattcggg cctgctggac gagctgatcc cccgcttcga gaagcagacg
     4201 ggctattcgg tgaagaccat cgccgtgggc tcgggccagg ccatcgccat gggcaggcgc
     4261 ggcgaggccg acgtgctgct ggtgcattcg ccggaggcgg aaaaggccct ggtggccgaa
     4321 ggctccggcc tgaaccggcg catcgtcatg cacaaccact tcatcctcct gggccccgcg
     4381 gccgatcccg ccggcatccg cgggaaggcc gcagggcccg ccctccaggc catcgcttcc
     4441 gcgggcgccg tcttcatgtc ccggggcgac aactccggca cccacgccca ggagaagaag
     4501 ctctgggccg ccgcgggcct caggcccgaa ggctccatct ggtaccagca gacgggcctg
     4561 ggcatgggcc agaccctcac catcgcggcc gagaagcggg cttacacatt gtcagaccgg
     4621 ggcacgtacc tggccctgcg caaaagactc gggctggagg tcctcagcga aggcgatgcg
     4681 gcgctcctga atgtctacca cgtcatcgaa gtgaaccccg cgcggttctc caaggtgaat
     4741 gccccgggag cccgcgcctt tgctgacttc ctggtgtcca aagatgtgca gacgttgatc
     4801 aaaaaatacg gaatctccac ccatggcgcg ccgttattct tccctgatgc cggtccccat
     4861 tgagggcccg ttaataacag actcaccacg gaggcacgga gtgcgccgag gaatccacag
     4921 agggaagcac ggagcgaagg ggacctcatg tttttctccg cgttctctcc gtggtctttt
     4981 ctccgcggcc tccgtgtctc cgtggtgaag tggccatgcc gaaggagtag cacccatgtc
     5041 caacgccatt ttcagcctgc ccgaatccca cagcgagccc atcctctcct acgcccccgg
     5101 ctcgaaggag cgcgcgctgc tgaaggccga gctcgcgcgc cagtccgccc tggtcctgga
     5161 catccccctc atcatcggcg ggaaggaagt gcgcacgggg aggacccaga aggccgtctg
     5221 cccccacgac caccagcacg tgctggccac cttccatgag gccggcgagg cggaagtgcg
     5281 catggccatc gatgcggcca tggccgccaa gaaggcctgg gaggccacgc cctgggagga
     5341 ccgcgccgcc atcttccaca agatgggcag cctcatctcc tccaagtacc gctacatcct
     5401 caacgccgcg accatgctgg gccagtcgaa gagcgcctac caggcggaga tcgacagcac
     5461 ctgcgaaacg gcggacttct tccgcttcaa cgcgaagttc atggagcaga tctaccagca
     5521 gcagcccatc tccgatccgc acgtgtggaa ccgcgtccac tatcgcgccc tggagggctt
     5581 cgtcttcgcc gtgacgccct tcaacttcac cgccatcggc gccaacctcg ccacggcccc
     5641 cgccatcatg ggcaacaccg tggtgtggaa gcccgcctcc acgtccgtgg tgtcgaacta
     5701 ctacctcatg cagctcttca aggaggccgg gctcccggac ggcgtcatca acttcatccc
     5761 cggccgcggc tccatgatcg ggaagatcgc cctggaggac cgcaacttcg ccggactgca
     5821 cttcaccggc tccaccggcg tcttcaacag catgtggaag accatcagcg gcaacctgga
     5881 acgctaccag agctacccgc gcatcgtggg cgagaccggc ggcaaggact acatcttcat
     5941 gcacgagtcc ggcgatgcgg ccgagaccgc cgcggccatc gtgcgcgccg gcttcgaata
     6001 ccagggccag aagtgctccg cctgctcccg cgtctacatc cccgcttccc ggtgggccga
     6061 gatgaaggag cgcctcctgg ccctgctggc cgagatcaag atgggcgacg tgcgggactt
     6121 ccgcaatttc ttcaacgccg tcatcgacga ggccgccttc gacaacacga tgaagtacat
     6181 cgagctggcg cggaacgcca aggacgccca gatcatcgca ggcggcaagg gcgacaagtc
     6241 caagggctgg ttcatcgagc ccacggtcat cctcaccacc aatcccaagt tcgtgaccat
     6301 ggaggaggag atcttcgccc ccgtcgtcac catctacgtc tatgacgacg cccagctgga
     6361 cgcgaccctg aagatcctgg acgagacctc gccctacgcc ctcaccggcg ccatcttcgc
     6421 ccgcgaccgc tacgtgatca accacctcac ggacgccctg gcgaacaccg ccggcaactt
     6481 ctacatcaac gacaagccca ccggcgccgt ggtgggccac cagcccttcg gcggggcccg
     6541 cgcctcgggc accaacgaca aggccgggag cttcctgaac ttgatccggt ggacctctcc
     6601 ccgcaccatc aaggagagct tcaccccacc gcgggacctc aagttcccct tcctcgagca
     6661 agagtaggag tccatggacc tgatctggga gggccttcgg aaagcgctgg agctgctgct
     6721 cacgcgggat cccgaggtcc tccggatcac cctgctctcc ctcgaggtct ccg
//
LOCUS       DASUDT010000440         3395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1964215, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000440 DASUDT010000000
VERSION     DASUDT010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964215"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VFV26_09065"
     CDS             <1..314
                     /locus_tag="VFV26_09065"
                     /inference="COORDINATES: protein motif:HMM:NF025890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX4846356.1"
                     /translation="MAVSSQAQESAGHKLPEPHAKAGVHCFNCHHEEKPTKKAVASDS
                     CMNCHGDYPAMKALTKDAKPNPHDSHLGEVPCIECHRQHLPPVVKCLECHEGKFKFRI
                     H"
     gene            complement(295..2202)
                     /locus_tag="VFV26_09070"
     CDS             complement(295..2202)
                     /locus_tag="VFV26_09070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4846357.1"
                     /translation="MLSTDAFQELFRRHPVPMWIYDLHTLGFLEVNDAACQVYGYDRE
                     AFLRLTLRDIRPPEEVVLLEGNVARGREPFQRSGTWRHMTRGGRVFEVEITSHALPYQ
                     GREAALVMAQDVSARYQEEQDLKRSHIRLAQARRLARLGTWDYYVLTDKVEGAEDFLE
                     LLGLQGQGPIRCAEDFFALVHPEDRAWVKEWIQKALKGEANLDFEHRVLLASGEERVI
                     RLSAEVIREGPDRPIQLWGVVQDVTEARCRLMADLQSQKLESLGLLAGGIVHDFNNLL
                     TAMLANFQLAAETIPGDSPAHRYLRLAATAAEKSALLTSQLLGYSGKGRFRVQPLDLN
                     LAVQEVLDMLRLSFGPKVDLHLHFEEGLPPVLGDPAQIQQVILNLATNGAEALGGQPG
                     TLRITTQSVALDEEYIRTTFAPTDQVLPGPYVCFQLSDTGCGIPPERLARIFDPFYTT
                     KPKGRGLGLAALLGIIRSHGGALKVYSEEGRGTNFRVFLPATRREALQAPQVQVPEGR
                     WTAGGKVLVVDDDDLVRATARGVLEREGFEVLEASSGAICLDAVRRAPGRIRLVLMDL
                     TMPGMDGVETYQALRALDAHVRVVLTSGYNEQEAINRFVQGDLAGFVQKPFSADELAQ
                     VVRSALSGSGT"
     gene            complement(2287..3261)
                     /locus_tag="VFV26_09075"
     CDS             complement(2287..3261)
                     /locus_tag="VFV26_09075"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX4846358.1"
                     /translation="MDLVFLRLSALGDILRVLPAWVNLHEAFPGARFRAVVEDRHAFL
                     LEPLPWVEPVLVVRKRLSNPLTALGELKRVAGLVRGAEASLDFHGILKAALIPRLAEV
                     PERWGDGVTKEFAGALQTHPLPFRHQTRYDQALGLAGAFGRSRGVEGLDRFRPVLAEA
                     ELPDPGAVWLQDGKPRAVLVPGASRRGAIKRWPLRHWIELARMMKDRWDLRWSLGPEE
                     EDLRSWLPEATGVSALPRLGFWQLASALRQADRVVSPDTGLLHLAVVLGVPVLGLYGS
                     SDPVVAGLPPGAGRVLRTGISCAPCRERACQRRQCMEDLAPQRVAEAF"
BASE COUNT          573 a         1195 c         1128 g          499 t
ORIGIN      
        1 tcatggcggt ctcatcccag gcccaggaat ccgccggaca caagctgccc gagccccacg
       61 cgaaggccgg cgtgcactgc ttcaattgcc accacgagga gaagcccacc aagaaggcgg
      121 tcgcttccga ttcatgcatg aactgccacg gcgactatcc cgccatgaag gccctgacca
      181 aggatgcgaa gcccaacccc cacgattccc acctggggga ggttccctgc atcgaatgcc
      241 accggcagca tctgccgccg gtcgtgaagt gcctggaatg ccacgagggc aagttcaagt
      301 tccggatcca ctgagcgcgc tgcgcaccac ctgcgccagt tcgtcggcgc tgaagggttt
      361 ctggacgaag cccgccagat ccccctgcac gaaccggttg atggcttcct gctcgttgta
      421 gccgctggta agcaccaccc ggacatgggc gtccagggcg cgcagggcct ggtaggtctc
      481 caccccgtcc atgccgggca tggtcagatc catgagcacc aggcggatcc gcccgggggc
      541 acggcgcacc gcatccaggc agatggcccc gctggaggct tccagaactt cgaagccttc
      601 ccgctccagc accccgcggg cggtggcccg caccaggtcg tcatcatcca ccaccagcac
      661 cttccctccg gccgtccagc ggccttcggg gacctggacc tggggggcct gaagggcctc
      721 ccgcctggtg gctggcagga agacccggaa gttggtcccc cgcccctcct cgctgtagac
      781 cttcaaggcc ccgccgtggc tgcggatgat gcccaggagg gcggccagtc ctaggccgcg
      841 gcccttcggc ttggtggtgt agaacggatc gaagatgcgg gccagccgct ccggggggat
      901 gccgcatccg gtgtctgaaa gctggaagca gacatagggg ccggggagca cctgatctgt
      961 gggggcgaac gtggtccgta tgtattcctc gtccagggcc accgactggg tggtgatgcg
     1021 gagggttccc ggctgcccgc ccagcgcctc ggcgccgttg gtggccaggt tcaggatcac
     1081 ctgctggatc tgggccgggt cccccagcac cgggggaagc ccttcttcga agtggaggtg
     1141 gaggtccacc ttggggccga aggacagccg gagcatgtcc agcacctcct gcaccgccag
     1201 gttgagatcc aggggctgca cccggaaccg ccccttgccc gagtagccga gcagctggga
     1261 ggtgagcagg gccgattttt ccgcggcggt ggccgccagg cggaggtagc ggtgggcggg
     1321 gctgtccccg gggatggtct ccgccgccag ctggaaattg gccagcatcg ccgtcagcag
     1381 gttgttgaaa tcatggacga tgccgccagc cagcaagccc aggctttcca gcttctggga
     1441 ctggagatcc gccatcagcc ggcagcgggc ctcggtgaca tcctggacca cgccccagag
     1501 ctggatgggc cggtcaggcc cctcgcggat cacttcggcg gacaggcgga tgacgcgttc
     1561 ctcgcccgaa gccagaagca cgcggtgctc gaaatcgagg ttggcctccc ccttcagggc
     1621 cttctggatc cattccttca cccaggcccg gtcctcggga tgcaccaggg cgaagaaatc
     1681 ctccgcacag cggatcggcc cctgcccctg cagccccagg agctcgagaa agtcctccgc
     1741 cccctccacc ttgtccgtga gcacgtagta gtcccaggtg cccaggcgcg ccaggcgccg
     1801 ggcctgggcc agccggatgt ggctccgctt gaggtcctgc tcttcctggt accgggcgga
     1861 gacatcctgg gccatgacca gggccgcctc ccttccctgg tagggcaggg catgggaggt
     1921 gatctcgact tcgaagaccc ggcccccacg ggtcatgtga cgccaggtgc cgctccgctg
     1981 gaagggctcc cgtccccggg ccacgttgcc ctccagcagc accacctcct cgggagggcg
     2041 gatgtcgcgc agggtaagcc ggaggaacgc ctcccggtcg tacccgtaga cctggcaggc
     2101 ggcgtcgttc acctccagga agcccaacgt gtgcagatcg tagatccaca tggggaccgg
     2161 atgtcggcgg aagagctcct ggaaggcatc ggtcgaaagc atgtcgcgta tccgatcctg
     2221 agggccctat ctttgcaaaa aacagccgga acggaagcgg atctttgatc gatcggaatc
     2281 ctgcggtcag aaggcctcgg ccacccgttg cggcgccaga tcctccatgc actgccgcct
     2341 ctggcaggcc cgctcccggc aaggggcgca gctgatcccc gtgcggagca cgcgcccggc
     2401 gcccgggggc agccccgcca ccaccggatc gctggacccg tagaggccca ggactggaac
     2461 cccaagcacc acggccagat gcagcagccc ggtgtccggc gacaccacac ggtccgcctg
     2521 ccggagcgcc gaagccaact gccagaaccc cagccgggga agggccgaaa ccccagtggc
     2581 ctcgggcagc cagctgcgga gatcctcttc ttcgggcccg agggaccatc gcaggtccca
     2641 gcggtccttc atcatgcggg ccagctcgat ccagtggcgc aggggccagc gcttgatggc
     2701 gccccggcgg gaggcccccg gcaccagcac ggcccgcggc ttgccatcct ggagccagac
     2761 cgcccctggg tccgggagct ccgcctccgc aagcacgggg cggaaccggt ccaggccctc
     2821 cacgccgcgg ctgcggccga aggctccggc caggcccagg gcctggtcgt accgggtctg
     2881 gtgccggaaa ggcaggggat gggtctggag cgcccccgcg aactccttgg tgacgccatc
     2941 tccccagcgc tcgggcacct ccgccagcct ggggatcagc gccgctttca ggatgccgtg
     3001 gaaatccagg ctggcttccg ccccccggac cagacccgcc acccgcttca gttccccaag
     3061 ggccgtcagg ggattcgaca gccgcttccg caccacgagc acaggctcca cccatggcag
     3121 cggttccagc aggaaggcgt ggcggtcttc caccacggcc cggaaccgcg ccccgggaaa
     3181 ggcctcgtgc aggttcaccc aggcggggag gacgcggagg atgtcgccga gggcggagag
     3241 gcggaggaaa accagatcca tgcccccatg ctacctgggg cccagggagt caggaggctt
     3301 tgtgccgcgc cacccagggc tcgaactgct tgtccaggcc gaggatgtga tccgccaacc
     3361 aggcctgcat catggacaga atgcgatccg aggtg
//
LOCUS       DASUDT010000441         3596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_594739, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000441 DASUDT010000000
VERSION     DASUDT010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594739"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VFV26_09080"
     CDS             complement(<1..193)
                     /locus_tag="VFV26_09080"
                     /inference="COORDINATES: protein motif:HMM:NF025057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX4846359.1"
                     /translation="MGNQAPIRFARRKSDLEGLWLLTFADLMVQLMAFFALLYSFSVA
                     DQTKLQQAVVSIQKALGVKS"
     gene            complement(186..935)
                     /locus_tag="VFV26_09085"
     CDS             complement(186..935)
                     /locus_tag="VFV26_09085"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX4846360.1"
                     /translation="MLLGVTLLAVAIGLGPNPRIFFHPASLIVVVGGVIAATLIRFPV
                     EHVTYAFSIASRAFFTRTPETQDLVGQIVGLSQRARREGLLKMEKSMDVEGFLAKGLR
                     MVVDRSGRDHIHAVLAQELRATQDRHHQGQEIFRFIALSAPSFGMVGTLIGMVQLFAS
                     IKDPSNIGGAMALSLLSTLYGAVIAYLLAIPIAGKLELRSKEELQLKQIMMEGVLGIE
                     GEMHPTALEAQLNAFLAPRERGADRRKSVRG"
     gene            1106..3391
                     /locus_tag="VFV26_09090"
     CDS             1106..3391
                     /locus_tag="VFV26_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX4846361.1"
                     /translation="MTDSTLPDRIAFLGGYQPRLCGIATFTHDLCEAVAAAAPASQCF
                     VGAVNDRIEGYDYPPRVRFELDEKDLDSYRRAADFLNFSNADVLCVQHEFGIYGGPAG
                     SHLLALLKEVRMPVVTTLHTVLRHPDAAQRKVMEELIRRSGRLVVMAHKGAEILQEAY
                     GVPGSMVDIIPHGIPDIPFADSSVHKTQFGVEGRTVLLTFGLLGPGKGIEYAIKALPE
                     IVKRHGNVVYLVLGATHPHLVARDGENYRLGLERLADDLGVKEHVIFYDRFVSLDDLK
                     EFIGAADIYLTPYLNEAQITSGTLAYVFGAGKAVVSTPYWHALELLADGRGTLVPFRD
                     PGAIAEGVCAYLDDPARLQRTRETAYRLGRGMIWPTVARRFLDSFQRARTERRAAPRA
                     AFAGWTLASRPYDLPPLRLDHVIRMSDGTGILQHATFNVPNYHEGYCTDDNARAFILC
                     TLLDELGGRSPAESLDRLATTYLAFLSTAMNRENGRFRNFMSHGRQWLEESGSEDSHA
                     RALWALGTGAGRSHNDGHRRLSAQLFERGLPAVAAFTSPRAWAFTLLGIHEFLGRFPG
                     HEAVEALRGALTQKLITRWQDSATEQWPWFESSATYDNARLCQALLLSGQAMPHPEAL
                     DIGLKSLRWLASVQKTREGHFRPIGNNGFYERDGAHAYFDQQPVEALAMVSACLEAFR
                     ATRDAAWPREAKRAFEWFLGRNDLGVPLYDSGSGGCRDGLHPEEASENQGAESTLSFH
                     LALAEMSLAEHEHTPAQDAAP"
     gene            3388..>3596
                     /locus_tag="VFV26_09095"
     CDS             3388..>3596
                     /locus_tag="VFV26_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosidase"
                     /protein_id="HEX4846362.1"
                     /translation="MTPITLRRHPMLLTPESARVIVRPFIPSSTHRITTIIGRALSLS
                     EEETAQNLQSVLGEFDTRHLDIETPL"
BASE COUNT          595 a         1310 c         1151 g          540 t
ORIGIN      
        1 ggctttttac gcccagggcc ttctggatgg agaccaccgc ctgctggagc ttggtctggt
       61 ccgccacgga aaaggagtac agcagggcga agaaggccat gagctgcacc atcaggtccg
      121 cgaaggtcag cagccagagc ccctccagat ccgacttgcg gcgggcgaac cggatggggg
      181 cctggttacc cacggacgct cttccggcgg tccgcccccc gctccctggg cgccaggaag
      241 gcgttgagct gggcctccag ggccgtgggg tgcatctcgc cttcgatgcc cagcacgccc
      301 tccatcatga tctgcttgag ctgcagttcc tctttgctgc gcagctccag cttcccggcg
      361 atgggaatgg ccagcaggta ggcgatcacc gcgccgtaga gggtggacag cagcgacagg
      421 gccatggccc cgccgatgtt ggaggggtcc ttgatgctgg cgaagagctg caccatgccg
      481 atgagcgtgc ccaccatgcc gaaggagggg gcgctcaggg cgatgaagcg gaagatctcc
      541 tggccctggt ggtggcggtc ctgggtggcc cgcagctcct gggccagcac cgcgtggatg
      601 tggtcccgtc cggagcggtc caccaccatg cgcaggccct tggccaggaa gccctccaca
      661 tccatgctct tctccatctt cagcaggcct tcccggcggg cccgctggga gaggccgacg
      721 atctggccca ccaggtcctg ggtttccggc gtccgcgtga agaaggcccg gctggcgatg
      781 gagaaggcgt aggtcacgtg ctccaccgga aagcggatca gcgtggccgc aatcaccccg
      841 cccaccacca cgatcagact ggccggatgg aagaagatcc gcgggttcgg ccccagcccg
      901 atggccaccg ccagcagcgt gacgcccagc aacatcccca gaaaactgcc tcggtccatg
      961 gaacaaccct cagggggctt atcggacggg ggcgcagggc acctcaattt ggtgctccgg
     1021 gggggggccg cgggagccgg gtgctaccct caagggtgga caactgggcg cgctgtgacg
     1081 tgttgcagcg attgagagga ctaccgtgac ggactccact ctgcctgacc gcatcgcctt
     1141 cctcggaggc tatcagccga ggctctgcgg gattgccacg ttcacgcacg acctctgcga
     1201 ggccgtggcc gccgcggccc ccgcctccca gtgcttcgtg ggcgcggtga acgaccgcat
     1261 cgagggctac gactacccgc cccgggtgcg cttcgaactg gacgagaagg atctggattc
     1321 ctaccggcgc gcggcggatt tcctgaactt cagcaatgcg gacgtgctgt gcgtccagca
     1381 cgaattcggc atctacggcg gaccggcggg cagccatctc ctggccctgc tcaaggaagt
     1441 ccgcatgccg gtggtgacca cgctgcatac ggtgctgcgc catcccgacg ccgcccagcg
     1501 gaaggtgatg gaggaactga tccggcggag cggccgcctg gtggtcatgg cccacaaggg
     1561 cgccgagatc ctccaggagg cctacggggt gcccggcagc atggtggaca tcatccccca
     1621 cgggatcccc gacatcccct tcgccgactc ctccgtccac aagacgcagt tcggcgtgga
     1681 gggacggacg gtcctgctca ccttcggcct gctgggcccg ggcaagggga tcgaatacgc
     1741 catcaaggcg ctgcccgaga tcgtgaaacg ccatggcaac gtggtctacc tcgtgctggg
     1801 ggccacccat ccccacctcg tggcccgcga cggggaaaac taccggctgg gcctggagcg
     1861 gctggccgac gacctcggcg tgaaagagca cgtcatcttc tacgaccgct tcgtgtccct
     1921 ggacgacctc aaggaattca tcggcgcggc ggacatctac ctcacgccct acctcaacga
     1981 ggcgcagatc acctcgggca ccctggccta tgtcttcggc gccggcaaag cggtggtctc
     2041 caccccctac tggcacgccc tggaactgct cgccgacggg cggggcaccc tggtgccctt
     2101 ccgggacccc ggcgccatcg cggaaggcgt gtgcgcctac ctcgacgatc ccgcccgcct
     2161 ccagcggacc cgtgagacgg cctaccggct ggggcgcggg atgatctggc ccacggtggc
     2221 gcggcgcttc ctcgactcct tccagcgcgc ccgcacggaa aggcgcgccg cgccgcgggc
     2281 ggccttcgcg gggtggaccc tcgccagccg gccctacgac ctgcccccgc tccgcctcga
     2341 ccacgtcatc cgcatgagcg acggcaccgg catcctccag cacgccacct tcaacgtgcc
     2401 gaactaccac gagggctatt gcaccgacga caacgcgcgc gccttcatcc tctgcaccct
     2461 gctggacgag cttggcggcc gctctccggc ggaaagcctg gaccgcctgg ccaccaccta
     2521 cctggccttc ctgtccaccg ccatgaaccg ggagaacggg cggttccgga acttcatgag
     2581 ccacgggcgc caatggctgg aggaatcggg cagcgaggac agccacgcgc gggcgctctg
     2641 ggccctgggc accggcgcgg gccgctcgca caacgatggg caccgccggc tgtcggccca
     2701 gctcttcgag cgcggcctgc ccgcggtggc ggccttcacc tcgccccggg cctgggcctt
     2761 caccctgctg ggcatccatg aattcctcgg ccgcttcccg ggacacgagg ccgtggaggc
     2821 gttgcgcgga gccttgaccc agaagctcat cacaaggtgg caggacagcg ccaccgaaca
     2881 atggccctgg ttcgaatcca gcgccaccta tgacaacgcc cgcctctgcc aggccctcct
     2941 gctcagcggc caggccatgc cccatccgga agcgctggat atcggcctca aatccctccg
     3001 ctggctggcc tcggtgcaga agacccggga gggccacttc cgccccatcg ggaacaacgg
     3061 cttctacgaa cgggacggcg cccacgccta cttcgaccag cagccggtgg aggcgctggc
     3121 gatggtttcc gcgtgcctcg aagccttccg cgcgacccgg gatgcggcct ggccccgcga
     3181 ggccaagcgg gccttcgaat ggttcctcgg ccgcaacgac ctcggcgtgc ccctctacga
     3241 ttccggcagc ggcggctgca gggacggact tcacccggag gaggccagcg agaaccaggg
     3301 cgccgaatcc acgctgtcct tccatttggc cctggccgag atgagcctgg ccgagcacga
     3361 acacacaccc gcccaggatg ccgccccatg acccccatca ccctccgccg ccacccgatg
     3421 ctcctcaccc ccgaaagcgc ccgggtcatc gtccgcccct tcatcccgtc cagcacccac
     3481 cgcatcacca ccatcatcgg ccgggccctc tccctgagcg aggaggagac cgcgcagaac
     3541 ctgcaatccg tgctcgggga gttcgatacc cggcacctgg atatcgaaac gcccct
//
LOCUS       DASUDT010000442         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1169329, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000442 DASUDT010000000
VERSION     DASUDT010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1169329"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2333
                     /locus_tag="VFV26_09100"
     CDS             <1..>2333
                     /locus_tag="VFV26_09100"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX4846363.1"
                     /translation="PQLLNELGGDFNGTTSLDRTNYYISFPASEENLAKALDLEADRM
                     VNSHFDEKTLWGEDGKSGEMTVVRNEFENGENNPIRVTLQRIQAMAFDWHNYGKSTIG
                     ARTDIEKVDVAHLRAFYKNYYQPDNAILVVAGKFDEAKALARINQTLGALPKPARTLE
                     PTYTLDPIQDGERSVTIRRVGGTPLLMVGYHVAPGFHASRSYLDLAGSILADAPGGRL
                     YKALVETKLAAQVFNFAFTTQDPGLLMFGVMLPKDGDTEKAREVLLKELENLQANPFT
                     AAELERAQAKVRKAVDQTFSDTKNLAVALSEGMAAGDWRHLFFDRDWSLGAKLEDVQT
                     AATATFKPSNRTLAQYLPTEKPDRAEIPAMPDVAALVKDYKGREVIAQGEAFDASPEQ
                     VDARATRFTAPNGLKGALLSKKTKGSLAALQLTLRFGREADLMDRKSVPDFTGNMLMR
                     GTARHSRQELTDTFDKLRAQVMVTGGATSATARITVPRENVAATLKLVAEILREPAFP
                     AAELDTLVKQAATGIESQRSEPQAKAMEFMGRTFEAYPAGHPSAYRGPDARLEELKTL
                     KPEDLKAFHQAFYGANHGEFAASGDFDAAEVQKLVAELFGGWSSPAAYERVAARLKAP
                     AGQRQAIETPDKKGAFFLVQSRWAMKDTDADYPAFLMANQILGGGALKSRLADRLRQK
                     EGFSYGAGSFANVGSLDPVTSWQAYAIYAPENAAKLEAAFDDEIQKALKDGFTQEELD
                     FARNSWLQSEKNSRQEDRSIAGSLARILYLGRSVSFD"
BASE COUNT          431 a          893 c          715 g          294 t
ORIGIN      
        1 gccccagctg ctcaacgaac tgggaggcga cttcaacggc accacctccc tggaccgcac
       61 gaactactac atctccttcc ccgccagcga ggagaacctg gccaaggccc tggacctcga
      121 ggccgaccgc atggtgaaca gccacttcga cgagaagacg ctgtggggcg aggacggcaa
      181 gagcggcgag atgaccgtgg tgcgcaacga gttcgagaac ggggagaaca accccatccg
      241 cgtgaccctc cagcgcatcc aggccatggc cttcgactgg cacaactacg gcaagtccac
      301 catcggcgcc cgcacggaca tcgagaaggt ggacgtggcc cacctccgcg ccttctacaa
      361 gaactactac cagccggaca acgccatcct ggtggtggcg ggcaagttcg acgaggccaa
      421 ggccctggcc cgcatcaacc agaccctggg cgccctgccg aagcccgccc gcaccctcga
      481 gcccacctac accctggatc ccatccagga cggcgagcgc agcgtcacca tccgccgcgt
      541 gggcggcacg cccctgctca tggtgggcta ccacgtcgcg cccggcttcc acgccagccg
      601 cagctacctg gacctggccg gctccatcct ggccgacgcc cccggcggcc gcctctacaa
      661 ggccctggtg gagaccaagc tcgccgccca ggtgttcaac ttcgccttca ccacccagga
      721 tccgggcctg ctcatgttcg gcgtgatgct gcccaaggac ggggacacgg agaaggccag
      781 ggaggtgctg ctgaaggagc tggagaacct ccaggcgaac cccttcaccg ccgccgagct
      841 ggaacgggcc caggccaagg tgcgcaaggc cgtggaccag accttctccg acaccaagaa
      901 cctggccgtg gcgctcagcg aaggcatggc cgccggcgac tggcgccacc tcttcttcga
      961 ccgggactgg agcctgggcg ccaagctgga agacgtgcag acggccgcca cggccacctt
     1021 caagcccagc aaccgcaccc tggcccagta cctccccacg gaaaagccgg atcgcgccga
     1081 gatccccgcc atgcctgatg tcgccgccct ggtgaaggac tacaagggcc gggaagtgat
     1141 cgcccagggc gaggccttcg acgccagccc cgagcaggtg gatgcccgcg ccacccgctt
     1201 cacggctccc aacggcctga agggcgccct gctctccaag aagaccaagg gttccctcgc
     1261 cgccctgcag ctcaccctgc gcttcggccg cgaggcggac ctcatggatc gcaagtccgt
     1321 gcccgacttc accggcaaca tgctcatgcg cggcaccgcc cggcacagcc ggcaggagct
     1381 cacggacacc ttcgacaagc tgcgggccca ggtcatggtc acgggcggcg ccacctccgc
     1441 caccgcccgc atcaccgtcc cccgggaaaa cgtggccgcc accctcaagc tggtggccga
     1501 gatcctgcgc gaacccgcct tccccgccgc ggaactggac accctggtga agcaggccgc
     1561 cacgggcatc gagtcccagc gcagcgagcc ccaggccaag gccatggagt tcatgggccg
     1621 gaccttcgaa gcctatcccg cgggccatcc ctcggcctac cgcggccccg acgcccggct
     1681 cgaagagctg aagaccctca agcccgagga tctgaaggcc ttccaccagg ccttctacgg
     1741 cgccaaccac ggcgagttcg ccgcctccgg cgacttcgac gccgcggagg tgcagaagct
     1801 ggtggccgag ctcttcggcg gctggtcctc ccccgccgcc tacgagcggg tggccgcccg
     1861 cctgaaggcc cccgcgggcc agcgccaggc catcgagacg cccgacaaga agggtgcctt
     1921 cttcctcgtc cagagccgct gggccatgaa ggacacggat gccgactacc ccgccttcct
     1981 catggccaac cagatcctgg gcggcggcgc gctgaagagc cgcctggcgg accgcctccg
     2041 ccagaaggag ggcttcagct acggcgccgg atccttcgcg aacgtgggca gcctcgatcc
     2101 cgtcaccagc tggcaggcct acgccatcta cgcgccggag aacgccgcca agctggaggc
     2161 cgccttcgac gacgagatcc agaaggccct gaaggacggc ttcacccagg aggagctgga
     2221 cttcgcccgc aacagctggc tgcagtccga gaagaacagc cgccaggagg atcgctccat
     2281 cgccggctcg ctggcccgca tcctctacct gggccgctcc gtgagcttcg acg
//
LOCUS       DASUDT010000443         5637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_528647, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000443 DASUDT010000000
VERSION     DASUDT010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5637
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528647"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1217
                     /locus_tag="VFV26_09105"
     CDS             <1..1217
                     /locus_tag="VFV26_09105"
                     /inference="COORDINATES: protein motif:HMM:NF015980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846364.1"
                     /translation="TEVVLSASSSAKLVLGMAPPKLSGLEEAQVATEFTTVLRRDLDE
                     TGVFAVLQERLPSGTAPAKAWKEAGAQWLLTVHLSRGAAGDLQLEASALDTAAEKPVF
                     TKPYKADRLVPLRRLAHALADDLVARLTGERGVASSRVVFVREMAPGVKELFQIDRDG
                     ANLIQLTRHGSLTLAPSVAADGRLAYVTYKGGAPEIWGQRRRDGAHEKLFPLSGSGGM
                     VSTPIWSPDGRRLAFVQGDRRGNSDIMILDLETGRARRLTDGSGINTEPTWNPNGTQI
                     AFTSDREGGPQVFLMQDDGSNLRRLTGEGQYNASPAWSPNGAMIAYVSRFEGKFDLFI
                     YKLGEGKAYQITTGVSTSESPAWSPDERRLVFTSNRFGTAQLFTTDLSGRQVVRMSEL
                     PGCQSPKWTRGR"
     gene            1284..2003
                     /gene="pal"
                     /locus_tag="VFV26_09110"
     CDS             1284..2003
                     /gene="pal"
                     /locus_tag="VFV26_09110"
                     /inference="COORDINATES: protein motif:HMM:TIGR02802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEX4846365.1"
                     /translation="MRYGTYLVPAAIVLTLGSLACKPPKTAEEIKQETQAAFNEGAQA
                     FKDGKARTTNPYLGEKEAKENPHKLQGWNDGWDKAKADKDAADKAAAEKAAAEEAARK
                     AAAEKAAAEEAARKAAEAEKAAAFTKAAEALKTIHFDYDKSDIKEADRALLQGIADFM
                     KAYPAAKVEIEGHCDERGTNEYNLALGNRRAAAALAYLKTLGVDEARFTTISFGKEKP
                     VCTEAKEACWSQNRRGEFKLK"
     gene            2082..2795
                     /locus_tag="VFV26_09115"
     CDS             2082..2795
                     /locus_tag="VFV26_09115"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4846366.1"
                     /translation="MNARTLLLPSLMALLAIGCGSEDQLRRVEQEVGDLKLEVFKLRQ
                     QVEDGNKRAEAEQKAAQESRTQDRRFQADLQESLRQVQDTTRVLNNRLNSLPRAGARP
                     AGDAQPAAQASEDERAFNAAVLDYNRGNYPLAAEGLDLFLKNYPQSAKRPDALFFLGL
                     CHYNQRTFDKAQQAFDRIIRDHAASPQFLPAKLKRAQCLLKQGLKPAAVKAFRELVDG
                     YSGSAEARTAQQELSDLGL"
     gene            2797..3777
                     /locus_tag="VFV26_09120"
     CDS             2797..3777
                     /locus_tag="VFV26_09120"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846367.1"
                     /translation="MNVESWRVPVRVDFAGGTLDLWPIYAMMGGCLTVNAAVDLWIEL
                     EVVREGSGHHLTSRDLGIDLAMDAWPKEPLPGLSWVWRVLAGSGAPPAAVSIHSPVPQ
                     GSGLGVSSCLGVGLLGSALGEEAGESLARKVPVLRDMESCELQTPAGWQDYYPAALGG
                     ALALHWDGPEPRWERLEPHPGLLADLVVFYTGKPHHSGMTNWEAYKRFIEGDAQTRQA
                     LSDIREIARDMAGALPSDPSEVASLLEREGQARVRLSPAVETDAMRAVRNRGRREGWY
                     AGMKPCGAGGGGCCLLVVKDGHRDEAEAALRDMGLPPLDLRITPKGLHRL"
     gene            complement(3749..4792)
                     /locus_tag="VFV26_09125"
     CDS             complement(3749..4792)
                     /locus_tag="VFV26_09125"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX4846368.1"
                     /translation="MKRDLPWRAQGLDAPHPDPYAVLVSELMLQQTQVATVIPYFTRW
                     MDQFPDAQALAEADEDAIHKAWEGLGYYRRARFLKAAAASVAAEGWPGDLEGLAGLPG
                     LGPYTAAAVGSIAFQWPVPALDGNAFRVLARLLLIEGDPKRAAADLRAWLAPALAAHG
                     PSRMTQALMELGATACGPAPLCAACPLSGRCGARLEQRTGDIPPVAKRAAPKASALWL
                     VAIEAQGRLLLHPPAAKGLLAGLWRWPTLNVTEFPPQVANQGPASLWAWPGWTQVYTH
                     RREAVNPLHLRLDMGFEAAEGLRWVPLSELHALPLGKRDQRLRDLLDTPGQAPLEAPG
                     LAALIKACAAPSA"
     gene            complement(5079..5164)
                     /locus_tag="VFV26_09130"
     tRNA            complement(5079..5164)
                     /locus_tag="VFV26_09130"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5128..5130),aa:Leu,seq:gag)
     gene            complement(5231..5569)
                     /gene="secG"
                     /locus_tag="VFV26_09135"
     CDS             complement(5231..5569)
                     /gene="secG"
                     /locus_tag="VFV26_09135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX4846369.1"
                     /translation="MNGLALALLILFGVLLIGAILLQPGTKGGLGASFGGGGANSAFG
                     AQGATPFLSKATYWLAAGFLGTTLLIEILIIRSNRSVLEKTADKPAVTTPAPVVPAPI
                     PAPAHAPAKQ"
BASE COUNT          981 a         1889 c         1975 g          792 t
ORIGIN      
        1 agaccgaagt ggtgctgagc gcctccagca gcgccaagct ggtgctgggg atggccccgc
       61 cgaagttgtc gggcctcgag gaggcccagg tggccacgga gttcaccacc gtgctcaggc
      121 gcgacctgga tgaaaccggc gttttcgccg tgctccagga gcggctgccc tccggcaccg
      181 ccccggccaa ggcctggaag gaggccgggg cccaatggct gctcaccgtc cacctcagcc
      241 ggggcgcggc cggcgacctc cagctggagg cttccgctct cgataccgcc gcggagaagc
      301 cggtgttcac caagccctac aaggccgatc ggctggtgcc cctccgccgg ctggcccatg
      361 ccctggccga cgatctggtg gcgcggctca ccggggagcg cggcgtggcc tccagccggg
      421 tggtcttcgt ccgcgagatg gcgccgggtg tgaaggaact cttccagatc gaccgcgatg
      481 gcgcgaacct catccagctc acccgccacg gcagcctcac cctggcgccc agcgtggcgg
      541 cggacggccg cctggcctac gtcacctaca agggaggcgc gcccgagatc tggggccagc
      601 gccgccggga tggcgcccac gagaagctct tccccctcag cggctccggt ggcatggtct
      661 ccacgcccat ctggtccccg gatggccgcc gcctggcctt cgtgcagggc gaccgccgcg
      721 gcaacagcga catcatgatc ctggatctcg aaaccggccg ggcccgccgc ctgaccgatg
      781 gcagcggcat caacaccgaa cccacctgga accccaacgg cacccagatc gccttcacgt
      841 cggaccgtga aggcggcccc caggtcttcc tcatgcagga cgacggttcc aacctgcgcc
      901 gcctgacggg ggaaggccag tacaacgcca gcccggcctg gagccccaac ggcgcgatga
      961 tcgcctatgt atcccgcttc gagggcaagt tcgatctttt tatctataag cttggcgaag
     1021 gaaaggccta ccagatcacc accggcgtga gcacctcgga atcgccggcc tggtcgcccg
     1081 atgagcgccg gcttgtgttt acaagcaacc gtttcggcac ggcccagctt ttcactaccg
     1141 atctctcggg acggcaggtg gtgcggatga gcgaacttcc aggctgccag agccccaagt
     1201 ggactcgcgg ccgttaaaaa ataaatgaca atttcctgag taccgtccat ctatactcag
     1261 gcttatccag gaggaacaat cccatgagat acggaaccta cctcgtccct gccgccattg
     1321 tgcttacgct cggcagcctc gcttgcaagc cccccaagac cgcggaggag atcaagcagg
     1381 aaacccaggc cgccttcaac gagggtgccc aggctttcaa ggacggtaag gcccgcacga
     1441 ccaaccccta cctcggcgag aaggaagcca aggagaaccc gcacaagctg cagggttgga
     1501 acgatggctg ggacaaggcc aaggccgata aggacgccgc tgacaaggcc gccgccgaga
     1561 aggccgccgc tgaagaagcc gcccgcaagg ccgccgccga gaaggccgcc gccgaggaag
     1621 ccgcccgcaa ggctgccgag gccgagaagg ccgccgcctt caccaaggct gccgaggccc
     1681 tcaagaccat ccacttcgat tacgacaagt ccgacatcaa ggaagcggat cgcgccctcc
     1741 tccagggcat cgccgacttc atgaaggcct atcccgccgc caaggtggag atcgaaggcc
     1801 actgcgacga gcgcggcacc aacgagtaca acctggccct cggcaaccgc cgcgccgccg
     1861 ccgccctcgc ctacctgaag accctgggtg tggatgaagc ccgcttcacc accatcagct
     1921 tcggcaagga aaagcccgtg tgcaccgagg ccaaggaagc ctgctggagc cagaaccgcc
     1981 gcggcgagtt caagctcaag tagccatttc gcatgacgcg aagcgggggc gccaagcccc
     2041 cgctttttca tttaggatgg aagcatcgcc ccggagttcc catgaacgca cgcacgctgc
     2101 ttcttccgtc cctgatggcc ctgctggcca tcggctgcgg gtccgaggac cagctccgcc
     2161 gcgtggagca ggaggtcggc gacctcaagc tcgaagtctt caagctgcgc cagcaggtcg
     2221 aagacggcaa caagcgcgcc gaggccgagc agaaggccgc ccaggaatcc cggacccagg
     2281 accggcgctt ccaggcggat ctccaggaga gcctgcggca ggtgcaggac accacgcggg
     2341 tgctgaacaa ccgcctgaac agcctgccga gggccggggc gcgcccagcc ggggatgccc
     2401 agcccgctgc ccaggcctcc gaggacgaac gtgccttcaa cgccgcggtg ctggattaca
     2461 accgcggcaa ctaccccctg gccgccgaag ggctggatct cttcctgaag aactaccccc
     2521 agagcgccaa gcgccccgac gccctcttct tcctgggcct atgccattac aaccagcgga
     2581 ccttcgacaa ggcccagcag gcttttgacc ggatcatccg ggatcatgcg gcttcccccc
     2641 agtttctgcc cgccaagctc aagcgtgccc aatgcctgct caaacagggg ctgaagcctg
     2701 cggcagtcaa agccttccgt gaactggtgg acggttattc cggcagcgcc gaagcccgca
     2761 cggcccagca ggaactgagc gatctcggcc tctaggatga acgtcgaatc ctggcgcgtt
     2821 cccgtccgcg tggacttcgc gggggggacg ctggatctgt ggcccatcta cgccatgatg
     2881 ggcggctgcc tcacggtcaa cgccgccgtg gatctgtgga tcgagctgga agtggtccgg
     2941 gagggaagcg gccaccacct gaccagccgc gatctgggga tcgatctggc catggatgcc
     3001 tggcccaagg agccgctccc ggggctttcc tgggtgtggc gggtgctggc cggctccggg
     3061 gcgccgccgg cggccgtctc catccacagc cccgtgcccc agggctcggg cctgggtgtg
     3121 tcctcctgcc tgggcgtggg cctgctgggc agcgccctgg gcgaggaggc cggtgaaagt
     3181 cttgcgcgca aggtgccggt actgcgggac atggaaagtt gtgagcttca aacccccgcc
     3241 ggttggcagg actactaccc ggcggccctg ggaggtgccc tggcgctcca ctgggacggg
     3301 cccgagccgc gctgggagcg cctggaaccc cacccgggcc tgctggcgga tctggtggtg
     3361 ttctacaccg ggaagccgca ccactcgggc atgaccaact gggaggccta caagcggttc
     3421 atcgagggcg acgcgcagac gcgacaggcc ctgtccgata tccgggagat cgcccgggac
     3481 atggccgggg ccctgccttc ggacccttcc gaggtggcct cgctgctgga gcgggaaggc
     3541 caggcccggg tgcggctttc cccggcggtg gagacggacg ccatgcgtgc cgtgcgaaac
     3601 cggggccgtc gcgagggctg gtacgcgggc atgaagccct gcggcgctgg aggtggcggt
     3661 tgctgcctgc tggtggtgaa ggacggccac cgggatgagg ccgaagcggc cctgcgggac
     3721 atgggcctgc cgcccctgga cctgcggatc acgccgaagg ggctgcacag gctttgatca
     3781 atgccgccag acccggcgcc tccagggggg cctggcccgg cgtgtccagg agatcgcgca
     3841 ggcgctgatc ccgcttgccg aggggcaggg cgtgcagctc ggacaggggg acccagcgca
     3901 ggccttccgc ggcttcgaag cccatgtcca gacgcaggtg caggggattc acggcctccc
     3961 ggcggtgggt gtagacctgg gtccagccag gccaggccca gagggaggcc gggccttggt
     4021 tcgccacctg gggagggaac tcggtgacat tcagggtggg ccagcgccag aggcccgcca
     4081 ggagcccttt cgcggccgga gggtggagca ggaggcgccc ctgggcctcg atggccacga
     4141 gccagagtgc ggaggccttc ggcgccgccc gcttcgccac cggcgggatg tccccagtgc
     4201 gttgctccag gcgggcgccg caccggcctg aaagggggca tgcggcacag aggggtgcgg
     4261 gcccgcaggc cgtggcgccc agctccatga gggcctgggt catgcgggag gggccgtggg
     4321 ctgcgagcgc cggagccagc caggcgcgca gatccgcggc tgcgcgcttg gggtcgccct
     4381 cgatcagcag cagccgggcc agcacgcgga aggcgttgcc atccagggcc gggacgggcc
     4441 actggaaggc gatggagccc acggcggcgg cggtgtaggg ccccaggccc gggaggcccg
     4501 ccaggccttc gagatcgccg ggccagccct cggcggccac ggaagccgcg gcggccttca
     4561 ggaaccgggc ccggcggtag tagccgaggc cctcccaggc cttgtggatg gcgtcctcat
     4621 cggcctctgc gagggcctgg gcatccggga actggtccat ccagcgggtg aagtacggga
     4681 tgacggtggc cacctgggtc tgctgaagca tcaactccga caccagcacc gcgtaggggt
     4741 ccggatgagg cgcatccagc ccttgcgcgc gccagggaag gtcacgcttc acctgttcga
     4801 accagggcgc gaggggggcg aggagatcag tggaggcagg ccagggcatg aggaagacgc
     4861 tagcagagcc gcgaaggcaa agcggaagag cggctgtgcc gggattccgc gcgggggtcc
     4921 gggggtgtgc gcgcagcgcg ggacctcgga gtgggagagc aaaagcggaa gagcggctgt
     4981 gccgggattc cgcgcggggg tccgggggtg tgcgcgcagc gcgggacccc cggagagcat
     5041 agacagcaaa agagcgccgt ttccggcgct ctttcatttg gtgcccgcga gcagactcga
     5101 actgctacgg cttgtggcca ccaccccctc aagatggcgt gtctaccaat ttcaccacgc
     5161 gggcacgtgg aacaaccatc atctcccaaa gcgcggaccc agtcaatgtc ccgttttgcg
     5221 ggagatggac ctactgcttc gcgggcgcgt gcgccggggc cgggatgggt gcggggacga
     5281 ccggcgccgg ggtggtgacc gcgggcttgt cggcggtctt ctccagcacg gagcggttgc
     5341 tgcggatgat gaggatttcg atgaggagcg tggtgccgag gaagcccgct gccagccagt
     5401 aggtggcctt ggagaggaag ggcgtggcgc cctgggcgcc gaaggcggaa ttcgcgccgc
     5461 cgccgccgaa ggaggcgccg aggccgccct tggtgccagg ctgcagcagg atcgctccga
     5521 tgaggaggac accgaaaagg atcagaagcg cgagggcgag gccattcatg gaaactccga
     5581 accatctagt ctgtcacgcc cgggcgttta catccagagc cctgtgaggc tgggggc
//
LOCUS       DASUDT010000444         3027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1014540, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000444 DASUDT010000000
VERSION     DASUDT010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014540"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VFV26_09140"
     CDS             complement(<1..246)
                     /locus_tag="VFV26_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846370.1"
                     /translation="MGLFSGKSRDETLAGRDEQLRLLEEENRILRNRLDGTEELVRHL
                     DGDRDLLLVALERLRPGLPPRELGEALMDVCFKPLGLA"
     gene            304..1743
                     /gene="cysS"
                     /locus_tag="VFV26_09145"
     CDS             304..1743
                     /gene="cysS"
                     /locus_tag="VFV26_09145"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX4846371.1"
                     /translation="MRQISLFNTLTRKIEPVVPLAPGCISLYTCGPTVYNYAHIGNLR
                     TFLFQDLLKRTFHAAGHGVRHCMNITDVEDKIIRDSQAALPVDASNEARHGAMKALTE
                     RFTDIFLEDLDTLRVQRADFLPRATAYIPGMIRLVQELEAKGLAYVREGSVYYRIAGL
                     PQYGCLAHLDREGMQGGTSVDADEYERDSVTDFVLWKAAKPGEPWWDSPWGPGRPGWH
                     IECSAMGLELLGERVDIHSGGVDLIFPHHENEIAQSEGCLGHRWVNHWVHGEFLMVEG
                     QKMSKSLGNFFTLRDLVAKGADPVAFRYAIQSNHYRKVLNFSFEGLRAAENSLKRIRA
                     FRKRMEGEGQAGGGPWAEAIDPMARLDQARELFWAAMADDLNTPEALAAIFTLISDLN
                     AQDDHVALTREERDAILAFLDEADAIFAAWPREEASLDAEVEALIEARRAAKAAKNWA
                     EADRVRDQLKALGIVLEDRKDGSVGWRRG"
     gene            complement(1805..2803)
                     /locus_tag="VFV26_09150"
     CDS             complement(1805..2803)
                     /locus_tag="VFV26_09150"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4846372.1"
                     /translation="MSANRTHLASGLAVALGMSCFGGLQAQTAQARAKVSAAVPRYQP
                     QAQVKGPIDLPGADELMDLGDEWSSGFKKFHPEANLIYRSKLTKDAVKDFQEGTALLI
                     LADREFTADETKVFQAKFGYMPMRIPVCLDANIVFVNKANPLTSITMEQLDAIYSRTR
                     LGGAKAPAMVWGDLGLRGDWAKVPITAYARAEGSNTRTSFAAQAMMKGEYRAGIQERG
                     DSSALAEAVMTDRGGIAFGTMASWYFANKVLPVVPYHIEDARFPNQDAITTSKYPMPR
                     MFYAYLNRTPGKPLPAPVNEIIHFLLTQEGQNAVADSGLLPGPPEFITIALKRLSR"
BASE COUNT          525 a          988 c         1011 g          503 t
ORIGIN      
        1 ggccaggccc aggggcttga aacagacgtc catgagggcc tcgcccagct cccggggggg
       61 aagccccgga cgaagccgct ccagcgccac caggagcagg tcccggtccc cgtccagatg
      121 ccggaccagt tcctcggttc catccagccg attccggagg atccggttct cctcctccag
      181 cagccgcagc tgctcatccc gcccggccag cgtctcatcc ctggattttc cactgaataa
      241 acccatgagg gcacccgggg gctttagaag cgcggccaaa gatggttacc tagagccatg
      301 aagatgcggc agatttccct gttcaacacc ctgacccgga agatcgaacc cgtggtgcct
      361 ttggcgccgg ggtgcatctc gttgtacacc tgcgggccca cggtctacaa ctacgcacat
      421 attggaaatt tacgcacatt ccttttccag gacctgctca agcgcacctt ccatgccgcg
      481 ggccacgggg tgcggcactg catgaacatc acggacgtgg aggacaagat catccgcgac
      541 tcgcaggcgg ccctgcccgt ggatgcctcc aacgaggccc gccacggggc catgaaggcc
      601 ctcaccgagc ggttcacgga catcttcctg gaggatctgg acaccctgcg ggtccagcgg
      661 gcggatttcc tgccccgggc cacggcctac atccccggga tgatccgcct ggtgcaggaa
      721 ctcgaagcca agggcctggc ctatgtccgg gaaggcagcg tctactaccg catcgccggc
      781 ctgccccagt acggctgcct ggcccacctg gaccgggagg gcatgcaggg ggggacctct
      841 gtggacgcgg acgagtacga gcgcgactcc gtcacggact tcgtcctgtg gaaggccgcc
      901 aagcccggcg agccctggtg ggacagcccc tgggggccgg gccgccccgg ctggcacatc
      961 gagtgctcgg ccatgggcct ggaactgctg ggcgagcggg tggacatcca cagcggcggc
     1021 gtggatctga tcttccccca ccacgagaac gagatcgccc agagcgaggg ctgcctgggc
     1081 caccgctggg tgaaccactg ggtgcatggc gagttcctca tggtcgaagg ccagaagatg
     1141 tccaagagcc tggggaactt cttcaccctg cgggacctgg tggccaaggg cgcggatccc
     1201 gtggccttcc gctatgccat ccagagcaac cactaccgca aggtgctgaa cttcagcttc
     1261 gagggcctgc gggccgcgga gaattccctc aagcgcatcc gcgccttccg caagcgcatg
     1321 gaaggcgagg gccaggccgg cggcggcccc tgggcggagg ccattgatcc catggcccgc
     1381 ctggaccagg cccgggagct gttctgggcg gccatggccg acgacctcaa cacccccgag
     1441 gccctggcgg ccatcttcac cctcatcagc gacctcaacg cccaggacga ccacgtggcc
     1501 ctcacccgcg aggagcgcga cgccatcctg gccttcctgg acgaggccga cgccatcttc
     1561 gccgcctggc cccgcgaaga ggccagcctg gatgccgagg tggaggccct catcgaggcg
     1621 cgccgcgccg ccaaggccgc gaagaactgg gcggaggcgg accgcgtgcg cgaccagctc
     1681 aaggccctgg gcatcgtcct ggaggatcgc aaggacggca gcgtgggctg gagacgcgga
     1741 tagttcttcc tctgcgcagc aaggccctcg tgcctgggca cgagggcctt gctgcgcggc
     1801 gggcctaccg gctgaggcgc ttcagggcga tggtgatgaa ctccggcggg ccggggagca
     1861 ggccggaatc cgcgacggcg ttctggcctt cctgcgtcag gaggaagtgg atgatttcgt
     1921 tgaccggggc cggcagcggc ttgccgggcg tgcggttcag gtaggcgtag aacatgcggg
     1981 gcatggggta tttgctggtg gtgatggcgt cctggttcgg gaaccgggcg tcttcgatgt
     2041 ggtagggcac caccgggagc accttgttgg cgaaatacca ggaggccatg gtgccgaagg
     2101 cgatgccgcc ccggtcggtc atgacggctt cggccagggc cgaggagtcg ccgcgctcct
     2161 ggatgccggc ccggtactcg cccttcatca tggcctgggc cgcgaaggaa gtacgggtgt
     2221 tggatccttc ggcgcgcgcg taggcggtga tgggcacctt ggcccaatcg ccccggagcc
     2281 cgagatcgcc ccagaccatc gcgggggcct tggcgccgcc gagcctcgtc cgggagtaga
     2341 tggcgtccag ctgctccatg gtgatggagg taagcgggtt cgctttgttg acgaagacga
     2401 tgttcgcatc caggcagacg gggatgcgca tgggcatgta gccgaacttg gcctggaaaa
     2461 ccttggtttc atcggccgtg aactcgcgat cggcgaggat gaggagggcc gtcccctcct
     2521 ggaaatcctt caccgcgtcc ttggtgagct tggaccggta gatcaggttc gcttccggat
     2581 ggaacttctt gaacccgctg gaccattcat cgcccagatc catgagctcg tccgcgcccg
     2641 gcagatcgat ggggcccttc acctgggcct ggggctggta gcggggaacc gcggccgaca
     2701 ccttcgcccg cgcctgggcc gtctgggcct gaagcccacc gaaacaagac atccccagcg
     2761 ccacggccaa gcccgaggcg agatgcgtgc ggttcgcgct catatgaacc ccttgttcag
     2821 atatcgaaga ccactgggaa ttgcccctgg ccggtcccct gaatgcgccc tggctgactg
     2881 gcaatgacct gggtggttgt caacataaat gccctgcagg tcatgatcgt acacccgaac
     2941 gatggatggt cgattctttg gtcaaaaacg tgatacaggt cacggtagca ccataattgc
     3001 ccccgaggtc catatttcca ggggcac
//
LOCUS       DASUDT010000445         4799 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1103246, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000445 DASUDT010000000
VERSION     DASUDT010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 4799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4799
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103246"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1435)
                     /locus_tag="VFV26_09155"
     CDS             complement(<1..1435)
                     /locus_tag="VFV26_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX4846373.1"
                     /translation="MRFRELGCWLRAHAPELLFALLLLAVLPMRDLWAPDEPDFAQCV
                     KEMRQRGDWLLPYLNGVPYSEKPILYYWVMKASSMALDTLTGGLGFTQEVAAWALRLP
                     SVIAAVAFLSAFRRWAARFLEPGIAESAAMILAVTPLWFWQSQFIQIDLLFSALLAWS
                     WCCWLGGYLLLRGQGEEAAPGEHRHWLLKAYVWLALAFLAKGPLAPVLSILVLAAFLL
                     WQRDFAVLRRAGILAGLAITLLIVAPWYVAAGLKGGPRYAYELIIFQNFERATKAWDH
                     IQPWWRYFEYVLGDFFPWVLLLPALALHLRRERRLGDPARRFLLLAFLMPFIFLSLAQ
                     SKQGKYLLMGYPFLALLLADLFQRMEGARARRLGLVLAAGLAVPALALVALAFFGAGG
                     AKVQAQLTPFLGPVRLMAFLLAGGAVLVARLAWQSRAGNLVPAMALSLGLLYLVGGTW
                     GFHLLDSQKSYRRWTAAVQPLIAGRQVF"
     gene            1537..1785
                     /locus_tag="VFV26_09160"
     CDS             1537..1785
                     /locus_tag="VFV26_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846374.1"
                     /translation="MSTLLLTLLLLATPAPAPADGVKEDIKQAGKQIGQGFKKGGKAV
                     GQAAKKGGKAVGRGAKTAGKGIAKGAKEVGKGVKEAVK"
     gene            complement(2032..3699)
                     /locus_tag="VFV26_09165"
     CDS             complement(2032..3699)
                     /locus_tag="VFV26_09165"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX4846375.1"
                     /translation="MTRRERTSLFVLWFFLGLLPLLVRPLWEPDEARYAEIPREMLAT
                     GDWLTPHLNGVLYFEKPPLQYWLSAIGMKLFGLNGAGARLPVALASGLMIWAAWRLAK
                     RLGARDPLWAPFMAATGLLAFMVGQILTLDALFSAFLVAALAASVEAVVQRREGHGGQ
                     GWALAAFTFMAGAMLTKGLAQVILMGGILVVSLPFAWKDAALRRAVLRTAFDPAGWAL
                     YLVLVVPWFWLVNRANPGHAQFFFIHEHFTRFLTHEHARQGSDNWVLDKLYFIGILAV
                     GLLPWLSATAVGLQRTWVFLKGRGPQGADHLARWTIGITVLAFLWPLAFFTMSGSKLA
                     PYILPAIVPLAALACVFEREGEEAQALRRTGKELALLGGIFFLATAVFRKDLHGLGWM
                     IALGAAFVGLGLWAHRPRGLTGPRLMAALGAVLWLLILAAQAAAGPGKSVAELVRKSP
                     AGAQWISYGNYFQGLAFYAQTRAVVVAGTGELAFGRDRLGAEASRWFNEEAASLGAVA
                     DRMKQEDPARPVLVMAKTAAWKKLSADEKANWEELARNSAAVVARRR"
     gene            complement(3826..>4799)
                     /locus_tag="VFV26_09170"
     CDS             complement(3826..>4799)
                     /locus_tag="VFV26_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional UDP-4-keto-pentose/UDP-xylose
                     synthase"
                     /protein_id="HEX4846376.1"
                     /translation="VYGLDLGAHKVSEHLANPRFHFVEGDVTISKEWIEYHIKKCDVV
                     LPLVAIATPKVYVTDPLRVFELDFEENLRVVRQCVKYKKRVVFPSTSEVYGMCPDTEF
                     DEHESPLVTGPIPMNRWIYSTSKQLLDRVIWAYGFQQGLKFTLFRPFNWMGPKLDSLN
                     TAKEGSSRLVTQFTWNLFNGEPLQLVDGGHAHRCFCDVSDAMDGLMAVLKNEGGKADG
                     QIFNIGNPANDYSVREIAEMMIALWKDHPFRIERGIPEGRMVEANSGEFYGKGYQDVA
                     RRTPSIKRMQSTFGFAPKVSMKDSLKKAMDFFVEEHKALEKVVETES"
BASE COUNT          888 a         1587 c         1653 g          671 t
ORIGIN      
        1 agaagacctg ccggcctgcg atcaggggtt ggaccgccgc cgtccagcgc cggtagctct
       61 tctgcgaatc caggaggtgg aagccccagg tgccccccac cagatagagc aggcccaggc
      121 tgagggccat cgcgggaacc aggttcccgg cccgtgattg ccaggccagc cgggccacga
      181 gaacggcgcc gccggcgagc aggaaggcca tgaggcggac gggccccagg aagggcgtca
      241 gctgggcctg gaccttggcg ccacccgccc cgaagaaggc cagggcgacc agggccaggg
      301 cgggcacggc cagccctgcg gccagcacaa ggccgaggcg ccgggcccgg gccccctcca
      361 tgcgctggaa gaggtccgcc aaaaggaggg ccaggaaggg ataccccatg agcaggtact
      421 tgccctgctt gctctgcgcg aggctgagga agatgaaggg catgaggaag gccagcagca
      481 ggaagcgccg ggcgggatcg cccaggcgcc tctcccggcg caggtgcagc gccagggcgg
      541 gcagcagcag cacccagggg aagaaatccc ccaggacgta ctcgaaatat cgccaccagg
      601 gctggatgtg gtcccaggcc ttggtggccc gctcgaagtt ctggaagatg atcagttcgt
      661 aggcgtagcg cgggccgccc ttgaggccgg cggccacgta ccagggcgcg acgatcagca
      721 acgtgatggc cagcccggcc aggatgcctg cgcggcgcag caccgcgaaa tcccgctgcc
      781 acaagaggaa ggccgccagc acgaggatcg agagcacagg cgccaggggc cccttggcca
      841 ggaaggccag ggcgagccag acgtaggctt tcaggagcca gtggcggtgc tccccgggcg
      901 cggcctcctc gccctgcccc cgcagcagca ggtagcctcc cagccagcag caccagctcc
      961 aggccagcag ggccgaaaag agcagatcga tctggatgaa ctggctctgc cagaaccaca
     1021 ggggcgtcac cgccagtatc atggccgcgg attccgcgat gcccggctcc aggaaacgcg
     1081 cggcccagcg gcggaaggcc gacaggaagg ccacggcggc gatcacggaa ggcagccgca
     1141 gggcccaggc cgccacctcc tgggtgaagc ccagcccccc ggtgagcgtg tccagggcca
     1201 tcgacgaggc cttcatcacc cagtagtaga ggatgggttt ctcgctgtag ggcacgccgt
     1261 tcaggtaggg cagcagccag tcgccccgct ggcgcatctc cttcacgcac tgggcgaaat
     1321 ccggttcgtc cggcgcccag agatcacgca tgggcagcac ggccagcagc agcagggcga
     1381 acagcagttc gggcgcgtgg gcccgcagcc agcagccgag ttcccggaag cgcatgcgct
     1441 tccccagggg ggaggagggg ggcagagtcg gggatccgtc catcccttca tcttccactg
     1501 gaacagccct tcccgcccat acgttagaat gggttcatgt ccacccttct cctcaccctc
     1561 ctgctcctgg ccacaccggc cccggctccc gccgacggcg tgaaagagga catcaagcag
     1621 gccggcaagc agatcggcca gggtttcaag aaaggcggca aagccgtggg ccaggcggcc
     1681 aagaaaggcg gcaaggccgt gggccgcggc gccaagaccg cgggcaaggg catcgccaaa
     1741 ggcgccaagg aagtgggcaa gggcgtcaaa gaggccgtga agtaggcccc atgaacaccg
     1801 gagccggcgt gggacacgat ccggcccgct cgggagagcg gtctcggcac tcccgcaggg
     1861 agtccgagaa agaggctgtg aagtaggctc catgaacacc ggagccggcg tgggacacga
     1921 tcccatccgc tcgggagagc ggtctcggca ctcccgaagg gagtccgaga aagaggccgt
     1981 aaagtaggcg gaccggcgcc gaggcccctg ggtccagatc gtcgggcggc gctaccgtct
     2041 ccgcgccacc acggcggcgg agttgcgggc cagttcctcc cagttggcct tttcatcggc
     2101 gctgagcttc ttccaggctg ccgtcttggc catcacgagg accggccgcg ccggatcctc
     2161 ctgtttcatc cggtcggcca cggcgcccag actggccgcc tcttcgttga accagcggga
     2221 cgcctcggcg cccagcctgt cccggccgaa ggccagttcc cccgtgcccg ccaccaccac
     2281 ggcccgggtc tgcgcataga aggccaggcc ctggaagtag ttgccatagc tgatccactg
     2341 ggctcccgcc ggtgacttgc gcaccagttc cgccacggac ttgccgggac cggccgcggc
     2401 ctgggccgcg aggatcaaca gccacagcac ggccccaagg gccgccatga ggcgggggcc
     2461 cgtgagcccc ctgggccggt gggcccagag gcccagtccc acgaaggcgg cgcccagggc
     2521 gatcatccac cccagcccat gcagatcctt gcggaagacc gccgtggcca ggaagaagat
     2581 cccgcccagc agggccagtt cctttccggt ccggcgcagg gcctgggcct cctcgccttc
     2641 acgttcgaac acgcaggcca gggccgccag gggcacgatg gccggcagga tgtagggtgc
     2701 cagcttggac cccgacatgg tgaagaaggc caggggccag aggaaggcca ggaccgtgat
     2761 cccgatggtc catcgggcga ggtgatcggc gccctggggg cccctgccct tcaggaagac
     2821 ccaggtgcgc tgcagcccca cggcggtggc cgagagccat ggcagcagcc ccacggccag
     2881 gatgccgatg aagtagagct tatccagcac ccagttgtcg gagccctggc gggcgtgctc
     2941 gtgggtgagg aagcgcgtga aatgttcgtg gatgaagaag aactgggcat ggccggggtt
     3001 ggcgcggttc acgagccaga accagggcac caccaggacc aggtagagcg cccagcccgc
     3061 gggatcgaag gcggtgcgca gcacggcccg gcggagggcc gcgtccttcc atgcgaaggg
     3121 cagcgagacc acgaggatgc cgcccatgag aatcacctgg gccagcccct tggtgagcat
     3181 ggcgcccgcc atgaaggtga aggccgccaa ggcccagccc tggccgccat ggccttcccg
     3241 gcgctggacc acggcctcca cggaagcggc gagggccgca acgaggaagg cgctgaagag
     3301 cgcgtccagc gtgaggatct ggcccaccat gaacgccagc aggcccgtgg cggccatgaa
     3361 gggcgcccac agcggatccc gggcgcccag gcgcttcgcc aggcgccagg ccgcccagat
     3421 catgaggccc gaggccaggg ccaccggcag ccgggccccg gcgccgttca gcccgaagag
     3481 cttcatgccg atggccgaca gccagtactg gaggggtggc ttctcgaagt acagcacccc
     3541 gttgaggtgc ggcgtcagcc agtcccccgt ggccagcatc tcccgcggaa tctcggcgta
     3601 gcgcgcctca tccggctccc agagaggccg caccagcagg ggcagcaggc ccaggaagaa
     3661 ccataggacg aagagggagg tgcgttcgcg gcgcgtcatg ggcttcagaa atccctgaag
     3721 ataaatctca ccaccaagac tccaaggcac caagaactgc aaaagcactt cattttttct
     3781 tggtgtcttg gtgtcttggt ggtgatccgt tgcagtccga aaaagctagc tctcggtctc
     3841 gacgaccttc tccagcgcct tgtgctcttc cacgaagaag tccatggcct tcttcaggga
     3901 atccttcatg gagaccttgg gcgcgaagcc gaaggtgctc tgcatgcgct tgatgctggg
     3961 ggtgcggcgg gccacatcct ggtagccctt gccgtagaac tcgccgctgt tggcttccac
     4021 catgcggccc tcggggatgc cgcgctcgat gcggaagggg tggtccttcc agagggcgat
     4081 catcatctcg gcgatctcgc gcacgctgta gtcgttggcg gggtttccga tgttgaagat
     4141 ctggccatcg gccttgccgc cctcgttctt cagcacggcc atgagcccgt ccatggcatc
     4201 gctcacgtcg cagaagcagc ggtgcgcgtg gccgccgtcc accagctgca ggggctcgcc
     4261 gttgaacagg ttccaggtga actgcgtcac gaggcggctg ctgccctcct tggcggtgtt
     4321 caggctgtcg agcttggggc ccatccagtt gaaggggcgg aacagggtga acttcaggcc
     4381 ctgctggaat ccgtaggccc agatgacacg gtccagcagc tgcttgctgg tgctgtagat
     4441 ccagcggttc atggggatgg ggcccgtgac caggggcgat tcgtgctcgt cgaactccgt
     4501 atcagggcac atgccgtaga cctcggaggt gctggggaac accacacgct tcttgtactt
     4561 cacgcactgg cggaccacgc ggaggttctc ctcgaaatcc agttcgaaga cgcgcagggg
     4621 atcggtcaca tagaccttgg gcgtggcgat ggccaccagg ggcagcacca catcgcactt
     4681 cttgatgtgg tattcgatcc actccttgga gatggtcacg tcgccctcca cgaagtggaa
     4741 gcgcgggttg gccaggtgct cggagacctt gtgcgcgccc agatccaggc cgtagacct
//
LOCUS       DASUDT010000446         2126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1766030, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000446 DASUDT010000000
VERSION     DASUDT010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766030"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VFV26_09175"
     CDS             <1..667
                     /locus_tag="VFV26_09175"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4846377.1"
                     /translation="GALLEGRVLPFRQVEVSAAVSSRITEMRVKEGDTVKAGQPMALL
                     YGKLEELEMQRVKALLERREFEAKGAKRLYDNKIIPEARALESRIELELARLQYETAV
                     EQVRLRTVVAPMDGVVVTRYREEGEAVSGAEPMFRLMDLTRVVVQCAASPASLTALAP
                     GRKVRVLFPESGGPASAEGEVALVDPCVDAAGKVRVKVVVANPEGRIRAGLRAQVMVP
                     EGP"
     gene            complement(704..949)
                     /locus_tag="VFV26_09180"
     CDS             complement(704..949)
                     /locus_tag="VFV26_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0106034 - protein maturation by [2Fe-2S]
                     cluster transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEX4846378.1"
                     /translation="MTDSTPHVAQKGPFQVEVEAGKTYHWCACGQSKKQPFCDGSHKG
                     GPFTPMAYTADVTGTKWFCGCKHSGTRPLCDGAHKKL"
     gene            complement(1021..1683)
                     /locus_tag="VFV26_09185"
     CDS             complement(1021..1683)
                     /locus_tag="VFV26_09185"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX4846379.1"
                     /translation="MQLIEDLQREHELIEQVLGSLRQFAEARLEGLGDPADGARFMAF
                     FRRYAGDFHHHKEEEILFGALVERAELPAERGPIAALTGEHRRMAGLLDAMEGLIGAP
                     LADAADRQRLQALAVDYSRSLWRHIDAENSVLFPEGEERLRRFHVRELPSRPMTEAEA
                     AAREGGLALLVAYPPLHDAEVHRGDGCVACPSFGTACEGLEYEWWTELEWEDAEERRG
                     GD"
     gene            complement(1689..>2126)
                     /locus_tag="VFV26_09190"
     CDS             complement(1689..>2126)
                     /locus_tag="VFV26_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032101.1"
                     /note="catalyzes the formation of biotin from
                     dethiobiotin; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HEX4846380.1"
                     /translation="ETIAAVRAAGLEVCSGGIVGMGETVDQRIHFLQELTELEPAPES
                     IPINQFVAVDGTPLADVDPLPPLELVRMIATARILFPKSRIRLSAGRTQMSDELQALC
                     FFAGANSIFTGEKLLTTPNPGGSHDHWLLGALGMRVEGAPVKV"
BASE COUNT          314 a          678 c          791 g          343 t
ORIGIN      
        1 gggagccctg ctcgaagggc gggtgctgcc gttccgccag gtggaagtca gcgcggcggt
       61 ttcgagccgg atcacggaga tgcgtgtgaa ggagggcgac accgtgaagg caggccagcc
      121 catggccctg ctctacggga agctggagga actggagatg cagcgggtca aggctctgct
      181 ggagcgccgg gagttcgagg ccaagggggc caagcgactc tacgacaaca agatcatccc
      241 cgaggcccgg gccctggaat cgcgcatcga actggaactg gcgcgtctcc aatacgagac
      301 cgcggtggag caggtgcggc tccgcaccgt ggtggccccc atggacggcg tggtggtgac
      361 ccggtaccgc gaagagggtg aggctgtttc cggggccgag ccgatgttcc gcctgatgga
      421 cttgacccgg gtggtggtcc agtgcgccgc gagtccggcg tccctgactg cgctcgcccc
      481 cggccggaag gtgcgggtgc tcttccccga gtctggtgga cccgcgagcg ctgaggggga
      541 ggtcgccctg gtggacccct gcgtggatgc cgccggcaaa gtccgggtca aggtggtggt
      601 ggccaatccg gagggacgga tccgcgccgg gctaagggcc caggtcatgg ttcccgaggg
      661 tccctgacgt ttgcggaacc cggtctctcg gctttgaggg gattcagagc ttcttgtggg
      721 ccccgtcgca caggggcctg gtgccgctgt gcttgcagcc acagaaccac ttggtgcccg
      781 tgacatccgc ggtataggcc atgggcgtga aaggaccgcc cttgtgggag ccgtcgcaga
      841 agggctgctt cttgctctgg ccacaggcgc accagtgata ggtcttgccc gcttcgacct
      901 ccacctggaa ggggcccttc tgggcgacgt ggggtgtgga atccgtcatg gcgatcctcc
      961 tgtcggggtg cctggtttgg atgggggaga ccactataac cccgcctccc cgggcgcaga
     1021 tcaatcccct ccccggcgct cctccgcatc ctcccactcc agttcggtcc accattcgta
     1081 ttccaggccc tcgcatgcgg tgccgaagga ggggcaggcc acgcagccgt cgccgcggtg
     1141 gacctctgca tcgtgcaggg gcggataggc caccagcagg gcgagaccac cctcgcgggc
     1201 cgcggcctcg gcttccgtca tggggcgcga aggcagctcc cgcacatgga agcggcgcag
     1261 gcgctcctcg ccctcgggga acaggacgga gttctcggca tcgatgtggc gccacaggga
     1321 gcggctgtag tccacggcca gggcttgaag ccgctgccgg tcagcggcat ccgccagggg
     1381 cgctccgatg aggccttcca tggcgtccag caggcccgcc atgcgccggt gctcgccggt
     1441 cagggcggcg atggggccgc gctccgcggg cagctccgcg cgttccacca gggccccgaa
     1501 gaggatctcc tcctccttgt gatggtggaa gtcgccggcg tagcggcgga agaaggccat
     1561 gaagcgggcg ccgtcggcgg ggtcgccgag gccctccagg cgggcctcgg caaactgccg
     1621 gagggagccc agcacctgct cgatgagctc gtgttcccgt tggaggtcct cgatgagctg
     1681 catgatgcct acaccttgac gggggcgccc tccacccgca tgcccagggc gcccagcagc
     1741 cagtggtcgt ggctgccgcc ggggttgggg gtggtgagga gcttctcgcc cgtgaagatg
     1801 gagttggcgc ctgcgaagaa gcagagggcc tggagttcat cgctcatctg ggtgcggccg
     1861 gcgctgaggc ggatgcggct cttggggaag aggatgcggg ccgtggcgat catgcgcacc
     1921 agctccagcg ggggcagggg gtctacgtcc gcaaggggcg tgccgtctac ggccacgaac
     1981 tggttgatgg ggatgctctc gggggcgggt tccagctcgg tcagctcctg gaggaagtgg
     2041 atgcgctggt ccaccgtctc gcccatgccc acgatgccgc ccgagcagac ctccaggccc
     2101 gcggcgcgca ccgccgcgat ggtctc
//
LOCUS       DASUDT010000447         2332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1699870, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000447 DASUDT010000000
VERSION     DASUDT010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699870"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /gene="panB"
                     /locus_tag="VFV26_09195"
     CDS             <1..729
                     /gene="panB"
                     /locus_tag="VFV26_09195"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEX4846381.1"
                     /translation="VDVILVGDSVGNVCLGFENTLPVSMAMMNHHLEAVARTQPTAML
                     VADMPYLSFHLSVEDTLRNAGGFLQRGAQAVKLEGGAKRLPMIHALLDAEIPVMGHLG
                     LTPQSVNPMGGFKVQGKQKAEALRLLEDAQKLQEAGCFALVLEGIPADLAAKVTETIE
                     IPTIGIGAGPQCSGQVLVIHDVLGLLPGSSPKFVRRYAEGFQDLRDALALWAEDVRSG
                     GFPDGRESYTLPEAVRPVLTQWHP"
     gene            782..1672
                     /gene="panC"
                     /locus_tag="VFV26_09200"
     CDS             782..1672
                     /gene="panC"
                     /locus_tag="VFV26_09200"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEX4846382.1"
                     /translation="MRVVRTIADLRALLRPLREEGKRIGFVPTMGFLHEGHGALIRQS
                     AARCDATVVSIFVNPNQFGPGEDLANYPRDLERDQNLCLETGATVLFLPEVAEIYPTG
                     FQTHVEPGRLAEPLCGRFRPGHFRGVATVVAKLFNMVQPDLAFFGQKDFQQTVVVRRM
                     VRDLNLPVDVVVVPTTREADGLALSSRNTYLDEEGRRRALTLSQGLLAAKAAFDGGER
                     QPAKLVETARALMTGADSIQYLELVDAQNLEPLQGAVDRTAALCVAAYVGSTRLIDNV
                     VLAPSPDEAGLNVSLSPQSV"
     gene            1737..2126
                     /locus_tag="VFV26_09205"
     CDS             1737..2126
                     /locus_tag="VFV26_09205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846383.1"
                     /translation="MLVPILLSATLLAMPQGRGHDKPGKGGKGGPPGHAKHEGGGPPG
                     LAKKGGMPPGLAKKFGSRLPERPYIAVDPRYQDRAYFLIDGRWELRKGLTVGVQAELR
                     DVLRMPMAPPPVPLPRVGVDLHVVLFN"
     gene            2139..>2332
                     /locus_tag="VFV26_09210"
     CDS             2139..>2332
                     /locus_tag="VFV26_09210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846384.1"
                     /translation="MHHRLTKTCLIAALALLALPGSARPDDDRRDRRGDRREDRREDR
                     REDREDRKYWKERDKAERKYG"
BASE COUNT          380 a          846 c          753 g          353 t
ORIGIN      
        1 gtggacgtca tcctcgtggg cgacagcgtg gggaatgtct gcctgggctt cgagaacacc
       61 ctgcccgtca gcatggccat gatgaaccac cacctggagg ccgtggcccg tacccagccc
      121 acggccatgc tggtggcgga catgccctac ctgagcttcc acctgagcgt ggaggacacc
      181 ctgcgcaacg ccggggggtt cctccagcgg ggggcccagg cggtgaagct cgaaggcggc
      241 gccaagcgcc tgcccatgat ccacgccctg ctggacgccg agatccccgt catgggccac
      301 ctgggcctca ccccccagag cgtgaacccc atgggcggct tcaaggtgca gggcaagcag
      361 aaggccgaag ccctgcgcct gctggaagat gcccagaagc tccaggaggc gggctgcttc
      421 gccctggtgc tggagggcat tcccgccgac ctggcggcca aggtgacgga aaccatcgag
      481 atccccacca tcggcatcgg ggccggtccc cagtgctcgg gccaggtgct ggtcatccat
      541 gatgtgctgg gcctgctccc cggttcgtcc ccgaaattcg tgcggcgcta tgccgaagga
      601 ttccaagacc tgcgagacgc actggccctc tgggccgagg atgtgcggtc cggagggttc
      661 ccggacggcc gggaatccta tacccttcca gaagctgttc gtccggttct gacccagtgg
      721 cacccctgat cgcgcccttg gtaaactgac aggcgctttc tgaaggatcc cgcttttgtc
      781 catgcgagtt gtccgaacca tcgctgatct acgcgccctt ctaaggcccc tgcgggagga
      841 aggcaagcgc atcggctttg tccccaccat ggggttcctg catgagggcc acggggccct
      901 catccgccag agcgccgccc gctgcgacgc cacggtcgta tccatcttcg tgaatccgaa
      961 ccagttcggc cccggcgaag acctggccaa ctacccccgg gacctggagc gggaccagaa
     1021 cctctgcctg gagaccggcg ccaccgtgct cttcctcccc gaggtggccg agatctaccc
     1081 cacgggcttc cagacccacg tggagccggg ccgcctggcg gagcccctct gcggccgctt
     1141 ccggcccggg catttccggg gcgtggccac cgtggtggcc aagctcttca acatggtcca
     1201 accggatctg gccttcttcg gccagaagga cttccagcag accgtggtgg tccgccgcat
     1261 ggtccgggac ctgaacctgc ccgtggacgt ggtggtggtg cccaccaccc gcgaagccga
     1321 cggcctcgcc ctgagcagcc gcaacaccta cctggacgag gagggccggc gccgggccct
     1381 gaccctcagc cagggcctgc tggccgccaa ggccgccttc gatggcgggg agcggcagcc
     1441 ggccaagctc gtggaaaccg cccgcgccct catgaccggg gccgactcca tccagtacct
     1501 cgaactggtg gacgcccaga acctggagcc cctccagggc gccgtggacc gcaccgccgc
     1561 cctgtgtgtc gccgcctatg tgggcagcac gcggctcatc gacaacgtgg tgctggcccc
     1621 gtctccggac gaggcgggcc tgaatgtgag cctgagcccg caaagcgtct agaatagaga
     1681 cacccccccc acccaagcat caaccacctg ccggggggcc tgttccggga ggtcccatgc
     1741 tcgtcccgat cctgctctcc gccaccctcc tcgccatgcc ccaggggcgc ggccatgaca
     1801 aacccggcaa ggggggcaag ggcggccctc cgggccatgc caagcacgaa ggcgggggcc
     1861 ctccgggact cgccaagaag ggcggcatgc cccccggact ggccaagaag ttcgggtccc
     1921 ggcttccgga gcggccctac atcgccgtgg atccccgcta ccaggaccgg gcctacttcc
     1981 tgatcgacgg ccggtgggag ctccgcaagg gtctcacggt gggcgtccag gccgagctcc
     2041 gcgatgtcct ccgcatgccc atggcacccc cgccggtgcc gctgccccgg gtgggcgtcg
     2101 atctccatgt ggtgctgttc aactaattgg gaggctccat gcaccatcgt ctgaccaaga
     2161 cctgcctcat cgccgccctc gccctcctgg ccctgcccgg ttcggcccgg cccgatgatg
     2221 atcgccggga ccgccggggt gaccgtcggg aagatcgccg ggaggaccgc cgcgaggacc
     2281 gtgaggaccg caaatactgg aaggaacgcg acaaggccga acgcaaatac gg
//
LOCUS       DASUDT010000448         2683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2185813, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000448 DASUDT010000000
VERSION     DASUDT010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185813"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..952
                     /locus_tag="VFV26_09215"
     CDS             164..952
                     /locus_tag="VFV26_09215"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX4846385.1"
                     /translation="MTSPLRFEIRDRIATLTLDRPDKLNALVPEMKEGFHEALAKAAE
                     PGVKALFLRGAGRAFCAGGDIGWMAKALTEGRWSEMEALLDLGVSVAHALATLPKPVV
                     AVVQGPAAGAGMSLALCADLRLATPEAILSMAFVKIGLHPDWGGSVMLSRLVNPAIAG
                     ELMLTGEGLDAARAQALGLVNRIVPADQLEAAVEALAQRLAAGPSETFARIKATLLRN
                     QGLDGEGLRARLEAEGAQMKAAMRHPDAKEGLAAFLEKRTPRFV"
     gene            1013..1297
                     /locus_tag="VFV26_09220"
     CDS             1013..1297
                     /locus_tag="VFV26_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846386.1"
                     /translation="MPILTVCADCERQALRSPRRGKAMAEALACLTKLLLVRKRLQGL
                     QIVRESCLRNCPFGRICVALKQGDQEVRHHLSPEEDLKKVAAKLAGTAKN"
     gene            complement(1298..1600)
                     /locus_tag="VFV26_09225"
     CDS             complement(1298..1600)
                     /locus_tag="VFV26_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846387.1"
                     /translation="MPTETFKASRWTKGNHLFTTVIEVTDAAVIRRKRSWFTVNEISI
                     HLSKVASVRIETGLLWSDIFIESTGGSDPLTSHGHTKADARRIKELIEVAQSRGMR"
     gene            complement(1600..2568)
                     /locus_tag="VFV26_09230"
     CDS             complement(1600..2568)
                     /locus_tag="VFV26_09230"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX4846388.1"
                     /translation="MAGMETAGVGGKAGGVMDSLRDAYGDTLVELGNEGANIVVFDAD
                     LAGSTRTSKFAKAFPDRFFNMGAAEQGMVAAAAGAATTGLVPFVSTFAMFATGRAYEF
                     VRQACGVGRQNVKIVATHAGLTVGEDGGTHQCLEDLALMRMIPGMTVLSPADALETKQ
                     AIRAAYAHHGPVYVRLTRDKFPRLHGEDYRFQIGKAVVLRPGKDVLLVGCGLGTSICL
                     DAADLLAAEGIEATVLHSPTLKPFDRDTLVSLAKRHKAVVTCEEHQAHGGLGGIVAEL
                     LSEAHPMPLRRVGVQDQFGQSGKPEKLLEAYGITPQAVAAAAKEAL"
BASE COUNT          391 a          902 c          952 g          438 t
ORIGIN      
        1 ggcttctccc agcaacgcgc cggtcttcac ctacaacgtg gaaagcaaca agtgagctga
       61 cggcccgccg caggggatgg cccgggggtc ttacacccga agcctcggtc ccgtccttgg
      121 cgtaaggtgg tggatcgccg atgcccggca tccaggatcg tccatgacca gccccctccg
      181 cttcgagatc cgtgaccgca tcgccacgct gacgctggac cggccggaca agctcaacgc
      241 cctggtgccg gagatgaagg agggcttcca cgaagccctt gcgaaggcgg cggaaccggg
      301 cgtgaaggcc ctgttcctgc ggggcgcggg gcgggccttc tgcgcgggcg gcgacatcgg
      361 ctggatggcg aaggccctta ccgaaggccg ctggtcggag atggaggccc tgctggatct
      421 gggggtttcc gtggcccacg cactcgccac cctgccgaaa cccgtggtgg cggtggtgca
      481 gggccccgcc gcgggcgcgg gcatgagcct ggccctctgc gccgacctgc gcttggccac
      541 ccccgaggcc atcctcagca tggccttcgt gaagatcggc ctgcacccgg actggggcgg
      601 cagcgtcatg ctgtcgcgcc tggtgaaccc tgccatcgcc ggggagttga tgctgaccgg
      661 cgagggcctc gatgccgccc gggcccaggc cctgggtctc gtgaaccgta tcgtgcccgc
      721 cgatcagctg gaggccgccg tggaagccct ggcccagcgc ctggcggcgg ggccttccga
      781 gaccttcgcc cgcatcaagg ccaccctgct gcgcaaccag ggattggacg gcgagggcct
      841 ccgcgcccgg ctggaggctg aaggcgccca gatgaaggcc gccatgcggc atccggatgc
      901 gaaggagggg ctggccgcct tcctggagaa gcggacgcca aggttcgtct gaatctggac
      961 agggcagcga ccggcttggc tggttccggc attgtgtgtc atttttattt ctatgcccat
     1021 cctcaccgtc tgcgccgact gcgagcgcca ggccctccgc agcccccggc ggggcaaggc
     1081 catggccgag gccctggcct gcctgacgaa gctgctcctc gtccgcaagc ggctccaggg
     1141 cctccagatc gtccgcgaat cctgcttgcg gaactgcccc ttcggacgga tctgcgtggc
     1201 cctgaagcag ggtgatcagg aagtgcggca ccatctctcg ccggaggagg acctcaagaa
     1261 ggtcgcggcg aagctggcgg gcacggcgaa gaactgacta ccgcatgccc cggctctgag
     1321 cgacctcgat gagttccttg atgcggcggg cgtcggcctt ggtgtggccg tggctggtca
     1381 gcggatcgct gccgccggtg ctttcgatga agatgtcgga ccagagcagg ccggtctcga
     1441 tgcggacgct ggccaccttc gacaggtgga tgctgatctc gttcaccgtg aaccaggacc
     1501 gcttgcggcg gatcacggcg gcatccgtga cctcgatgac cgtggtgaac aggtggttgc
     1561 ccttcgtcca gcggctggcc ttgaacgttt ccgtgggcat cagagtgcct ccttcgcggc
     1621 ggcggccacg gcctggggcg tgatgccgta ggcctccagc agcttctcgg gctttccgct
     1681 ctggccgaac tggtcctgca cgcccacccg gcgcaggggc atgggatggg cttccgaaag
     1741 gagctccgcc acgatgccgc ccaggccgcc gtgggcctgg tgttcctcgc aggtgaccac
     1801 ggccttgtgg cgcttcgcca gggataccag cgtgtcgcga tcgaagggct tgagggtggg
     1861 gctgtgcagc accgtggcct cgatgccttc ggcggccagg aggtcggccg catccaggca
     1921 gatggaggtg ccgaggccgc agcccaccag cagcacatcc ttgcccgggc ggagcaccac
     1981 ggccttgccg atctggaagc ggtagtcctc gccgtggagg cgggggaact tgtcgcgggt
     2041 gaggcggacg tagaccgggc catggtgggc gtaggcggcg cggatggcct gcttcgtctc
     2101 cagcgcgtcg gcgggcgaaa ggaccgtcat gcccgggatc atgcgcatga gggccaggtc
     2161 ctcgaggcac tggtgggtgc cgccgtcctc gcctacggtg aggcccgcgt gggtggccac
     2221 gatcttcacg ttctggcggc ccacgccgca ggcctggcgc acgaactcgt aggcccggcc
     2281 cgtggcgaac atggcgaagg tgctcacgaa gggcaccagg cccgtggtgg cggccccggc
     2341 ggcagcggcc accatgccct gctccgcggc gcccatgttg aagaagcggt ccgggaaggc
     2401 cttggcgaac ttgctggtgc gggtggaccc ggccagatcc gcgtcgaaga ccacgatgtt
     2461 ggcaccctcg ttccccagct ccaccagggt gtccccgtag gcgtcccgca ggctgtccat
     2521 caccccgccg gccttgccgc ccacgcccgc cgtctccatg cccgccatga cttctccttg
     2581 aaggttccat tctaccgaag gtggggcggc gccgctgcgc tgcgccgcaa gccagatcgc
     2641 cagaggcgat ctggcggatc cgataggctg gatggatgcg ttc
//
LOCUS       DASUDT010000449         5549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2053643, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000449 DASUDT010000000
VERSION     DASUDT010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5549
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053643"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1298
                     /locus_tag="VFV26_09235"
     CDS             162..1298
                     /locus_tag="VFV26_09235"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX4846389.1"
                     /translation="MKKTILFLLAGSAITLTAQQGQAWVAGHLGQTMFDSDAKILGFK
                     MKDQMHYGLGAGHWYSDRWGLDLRALRNDLELDAPGAPSDTQTHLLASGLFNLRPGAD
                     NWYPYLAAGIGGTNIGSPYSGKAESTTRFNYHGGLGVMGKLAENFMLDVNAKAVRVEL
                     PKSRTEYLATLGLGYTWGGGRKAAPAPPPPPPPPPAPEPEPAPVAPPPPPPPPPAPEP
                     PKAVVMPVPPPPAKIVLDEAVLHFANGKSELGPDATAAIQKVADSLKAYPGNYTLEVS
                     GHTSSLGGKALNKTLAKRRADAVAKVLVDSGIPAAKVTTVGVGPDKPIADNATKEGQA
                     KNRRVEIDVKVNDGKAEVRKTETGVVDAAAPAPAPKKPAKKATK"
     gene            1359..1742
                     /gene="mscL"
                     /locus_tag="VFV26_09240"
     CDS             1359..1742
                     /gene="mscL"
                     /locus_tag="VFV26_09240"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX4846390.1"
                     /translation="MSMKDEFKAFIMKGNVVDLAIAVVVGGAFGKIVTAFVDGIVMPL
                     VTYVLPANIKWEEWVLGKFRVGAVLGATLDFLIIALVIFLVLIKFLGRIVKKEAAAPT
                     TKECPACLEQVPLKATRCKHCTSQL"
     gene            1931..4675
                     /gene="ileS"
                     /locus_tag="VFV26_09245"
     CDS             1931..4675
                     /gene="ileS"
                     /locus_tag="VFV26_09245"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEX4846391.1"
                     /translation="MMADLPQREPKRLERWKAEGLYARIEARRKADNAAGRGKGREVL
                     HDGPPYANGAIHMGHALNKILKDVVVKSRWMEGYESPYVPGWDCHGLPIEHAVEKDLG
                     PKRRELSRAEFLQRCRAYAQKWIDTQRTAFQRLGVLGAWEEPYVTMAPRYEAETVRHL
                     AKLFKSGSVTRKLKVVHWSYGARTALAEAEVEYADKTSPAITVAFPVADTEAKRLELP
                     VPLFVPIWTTTPWTLPSNLAVAMHPDLEYAVVRAHVGDTDRHYIVAVTLREDFAKKLG
                     AELHTVEIRKGKEFQTLVARHPWIDRASPVLLGDHVTADTGTGLVHTAPDHGVDDFNL
                     AHHLGLLQLVGPDGKFLPAVEDPELEGKNIFDGNPLVVERLKREGRLIHEESLTHSYP
                     HCWRTRTPILFRATEQWFITMDSELAGKGRSLRELGIEGVEQTQWIPAQGQNRIHAMI
                     AGRPDWCISRQRAWGTPITVLRCEACGEPLVADSIFEAAAAAIEVGGIEAWSELPVEG
                     LVPAGGRCVCGSTAFQKETDILDVWIDSGVSASVVCESHSELNRGDYGKFIYLEGSDQ
                     HRGWFHSSLLFNLAATGTKPYKQVVTHGFVLDGKGQKMSKSLGNVITPEEILKTLGAD
                     ILRWWAASCDYSEDIRISKEILDRSADAYRKIRNTLRFLLGALADFDPAKDAVAPADL
                     APLDRWVLDAFARTTVEARDAYTRFEFHRATQAIHGFCQLELSGRYFEIIKDRLYCDA
                     LDSSRRRSCRHACWELAKGLCALLAPVMSYTADEAWEQIPGCSGSVHEQRFPEIKGCA
                     VDPRWEKLWEVREAVQAAMEPHRAAKSIGTSLDAAVVITLGGQADWDLLESLGESLDD
                     LLVVSSIARIADPGAVAGPIVTVTTHPGEKCPRCWNRKGGHGAGEDAALCVRCAAVVS
                     "
     gene            4675..5166
                     /gene="lspA"
                     /locus_tag="VFV26_09250"
     CDS             4675..5166
                     /gene="lspA"
                     /locus_tag="VFV26_09250"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX4846392.1"
                     /translation="MRRLLWLLLPATALAADLGSKAWILGLLREGESLPVIKGFFYLT
                     LGFNRGAIFGSLTWLPDTARFILFGLAGVAAIFYFGRLFLAKETPTWDRVSLGLILGG
                     ALGNGIDRILRGAVVDFLDFLFGTWHYWTFNLADSFILVGAVLYGLRMLMAPKAEHRP
                     AGK"
     gene            complement(5283..>5549)
                     /locus_tag="VFV26_09255"
     CDS             complement(5283..>5549)
                     /locus_tag="VFV26_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846393.1"
                     /translation="QGDGFVTAGKWAEAKAAYEAASKLAPGVWEMPFWQAVALASSGK
                     RDEALPLFKQVFAAEPFWKRLVPRLAEVDQLPRDPELLKAIQAQ"
BASE COUNT          944 a         1894 c         1794 g          917 t
ORIGIN      
        1 gacggttatt gcggaaggcg attaattcat atcacttctt gatgtaagat gctgattctt
       61 atcatctaca aaatgaacga atgtttcact tttttatttg gacccgtgga ttccttcacg
      121 gtagcttgtg ccgtgatgga aatcacaacc atggaggtgc catgaaaaaa acgattctat
      181 ttttgctggc cggctcggcc atcaccctca cggcccagca gggccaagcc tgggttgccg
      241 gccacctggg ccagaccatg ttcgattccg acgccaagat cctgggcttc aagatgaagg
      301 atcagatgca ctacggtctg ggtgcgggcc actggtacag cgaccgctgg ggactcgacc
      361 tgcgggccct gcgcaatgac ctggaattgg atgcgccggg cgctccgtcg gatactcaga
      421 cgcatctgct ggcctcgggc ctcttcaacc tccgtcctgg cgcggacaac tggtatccct
      481 acctggcggc gggcatcggc gggaccaaca tcgggtcccc ctattccggc aaggccgaaa
      541 gcaccacccg cttcaactac cacggtggcc tcggtgtcat gggcaagctg gccgagaact
      601 tcatgctgga cgtgaacgcc aaggcggtcc gggtggaact gcccaagtcc cgtactgagt
      661 acctggcgac cctgggcctc ggctacacct ggggcggtgg ccggaaggcc gctcctgcgc
      721 ccccgccccc cccgccgcct ccgccggctc ccgaaccgga gcccgcgccc gtggccccgc
      781 cgccgccccc gccgccgcct ccggctcccg agccgcccaa ggccgtggtg atgcccgtgc
      841 cgccgccccc ggccaagatc gtcctggatg aggccgtgct gcacttcgcc aacggcaaat
      901 cggaacttgg gcccgatgct actgctgcca tccagaaggt ggccgacagc ctcaaggcct
      961 atcccgggaa ctacaccctg gaggtcagcg gccacacctc atccctgggc ggcaaggccc
     1021 tgaacaagac cctggccaag cgccgggccg atgcggtggc caaggtcctg gtggattccg
     1081 gcattccggc cgccaaggtg acgaccgtgg gtgtgggccc cgacaagccc atcgccgaca
     1141 acgccacgaa ggaagggcag gcgaagaacc gccgcgtgga gatcgacgtg aaggtgaacg
     1201 atggcaaggc cgaggtccgc aagaccgaga ccggcgtcgt cgatgccgct gccccggctc
     1261 ccgctccgaa gaagcccgcc aagaaggcca ccaagtagat gtgaccgctg gaccgcgggg
     1321 gcgtgcgcgc ccccgccgct ttgttaggga gaaacgccat gtccatgaaa gatgaattca
     1381 aggccttcat catgaagggc aacgttgtcg atctggccat cgccgtggtc gtgggcggcg
     1441 ccttcggcaa gatcgtcacg gccttcgtgg atggcatcgt gatgcccctg gtgacctacg
     1501 tgctgcccgc caacatcaag tgggaggagt gggtcctcgg caagttccgg gtgggcgcgg
     1561 tcctcggtgc caccctggac ttcctgatca tcgccctggt gatcttcctc gtgctgatca
     1621 agttcctggg caggatcgtg aaaaaggagg cggctgcgcc caccaccaag gagtgcccgg
     1681 cctgtctcga gcaggtgccc ctcaaggcca cccgctgcaa gcactgcacc agtcagctct
     1741 gatcggtttc gacttactga aagggcccgg tcatccgggc ccttttcctt gtgagtgcaa
     1801 gggttcccgt ggtgaactgg aggatcaacc cggggcgctt gggtgcgccc cccgacgcac
     1861 gagggcgccg atgagcgagc aagctccggt taaaaagtat tcggttttcc tgccgaagac
     1921 cgatttcccc atgatggcgg acctgcccca gcgtgagccg aagcgcctgg agcgctggaa
     1981 ggccgagggc ctgtatgccc gcatcgaggc caggcgcaag gcggacaacg ccgcgggccg
     2041 gggcaagggc cgcgaggtgc tgcatgacgg cccgccctac gccaacggcg ccatccacat
     2101 ggggcacgcc ctcaacaaga tcctcaagga cgtggtggtg aagtcccggt ggatggaagg
     2161 ctacgagtcc ccctacgtgc cgggctggga ctgccacggc ctgcccatcg agcacgcggt
     2221 ggagaaggac ctgggcccca agcgccgcga gctgagccgc gccgagtttc tccagcgctg
     2281 ccgcgcctac gcgcagaagt ggatcgacac ccagcgcacg gccttccagc gcctgggcgt
     2341 gctgggcgcc tgggaggagc cctatgtcac catggcgccc cgctacgagg ccgagaccgt
     2401 ccgccatctg gcgaagctct tcaagagcgg cagcgtcacc cgcaagctga aggtcgtcca
     2461 ctggagctac ggggcccgca cggccctggc ggaggcggag gtggagtacg ccgacaagac
     2521 cagcccggcc atcaccgtgg ccttcccggt agccgacacc gaggcaaagc gcctggaact
     2581 gcccgtcccc cttttcgtgc ccatctggac caccacaccc tggaccctgc ccagcaatct
     2641 ggcggtggcc atgcacccgg acctggaata cgcggtggtg cgggcccacg ttggcgacac
     2701 ggaccgccac tacatcgtgg ccgtcaccct gcgcgaggac ttcgccaaga aactgggtgc
     2761 cgagctgcac acggtggaga tccgcaaggg caaggaattc cagacactgg tggcccggca
     2821 tccctggatc gaccgcgcca gccccgtgct gctgggcgac cacgtcaccg cggatacggg
     2881 cacgggcctg gtgcacacgg cgccggacca cggcgtggac gacttcaacc tggcccatca
     2941 cctgggcctg ctccagctcg tggggcccga cggcaagttc ctgcccgcgg tggaggaccc
     3001 cgagctggag gggaagaaca tcttcgacgg caatcccctg gtggtggagc gcctgaagcg
     3061 ggaagggcgc ctgatccacg aggagagcct gacccacagc tatccccact gctggcggac
     3121 ccggacgccc atcctcttcc gcgccaccga gcagtggttc atcaccatgg attcggagct
     3181 ggcgggaaag ggccgcagcc tgcgggaact gggcatcgag ggggtcgagc agacccagtg
     3241 gatccccgcc cagggccaga accgcatcca cgccatgatc gcgggccgtc ccgactggtg
     3301 catcagccgc cagcgcgcct ggggcacgcc catcacggtg ctgcgctgcg aggcctgcgg
     3361 cgagccgctg gtggcggatt ccatcttcga ggccgccgcc gccgccattg aagtgggtgg
     3421 catcgaggcc tggtcggagc tgcccgtgga gggcctcgtg cccgccgggg ggcgctgcgt
     3481 ctgtggttcc acggccttcc agaaagaaac ggacatcctc gatgtgtgga tcgattccgg
     3541 tgtcagcgcc tccgtggtgt gcgagtccca ttcggaactg aaccgcggcg actacgggaa
     3601 gttcatctac ctggagggct cggaccagca ccggggctgg ttccacagct ccctgctgtt
     3661 caacctcgcc gccacgggca ccaagcccta caagcaggtg gtcacccacg gcttcgtgct
     3721 ggatggcaag ggccagaaaa tgtccaagag cttgggcaac gtcatcacgc ccgaggagat
     3781 cctcaagacc ctgggcgccg acatcctccg ttggtgggcc gccagctgcg attacagcga
     3841 ggacatccgt atctccaagg agatcctgga ccgcagcgcc gacgcctatc gcaagatccg
     3901 caacaccttg cgcttcctgc tgggggcgct ggcggacttc gacccggcca aggacgccgt
     3961 cgcgcccgcg gacctggccc ccctggaccg ttgggtgctg gacgccttcg cccgcaccac
     4021 ggtcgaagcc cgggatgcct acacgcgctt cgagttccac cgcgccaccc aggccatcca
     4081 cggcttctgc cagctggagc tgtcgggccg ctacttcgag atcatcaagg accgcctcta
     4141 ctgcgacgcc ctggattcct cccgccgccg cagctgccgc catgcctgct gggagctggc
     4201 caagggcctc tgcgccctgc tggccccggt catgagctac accgccgacg aggcctggga
     4261 gcagatcccg gggtgttcgg gcagcgtgca tgagcagcgg ttccccgaga tcaagggctg
     4321 cgccgttgat ccaaggtggg aaaaactctg ggaggtccgt gaggcggtgc aggcggccat
     4381 ggaacctcat cgcgctgcga agagcatcgg caccagcctg gatgcggccg tcgtgatcac
     4441 cctgggcggc caggctgatt gggacttgct ggaaagcctc ggcgaatccc tcgacgacct
     4501 cctcgtggtt tcttccatcg cccgaatcgc agatccgggc gccgtggctg gccccatcgt
     4561 cacggtcacc acccacccgg gcgagaagtg cccccgctgc tggaaccgga agggcggcca
     4621 tggcgcgggc gaggacgcgg ccctctgcgt ccgctgcgcc gcggtggtgt cctagtgcgc
     4681 cgcctgctct ggctgctgct tcccgccacc gcgctggccg cggatctggg ctccaaggcc
     4741 tggattctcg ggctgctgcg ggaaggcgaa tccctgcccg tcatcaaggg cttcttctac
     4801 ctgaccctgg gcttcaaccg gggcgccatc ttcggcagcc tcacctggct gccggatacg
     4861 gcgcgcttca tcctcttcgg cctcgcgggg gtggcggcca tcttctattt cgggcgcctc
     4921 ttcctggcga aggagactcc cacctgggat cgcgtaagcc tgggcctcat cctcggcgga
     4981 gccctgggca acggcatcga ccgcatcctg cggggcgccg tggtggactt cctggatttc
     5041 ctcttcggca cctggcacta ctggaccttc aacctcgccg acagcttcat cctcgtgggc
     5101 gccgtcctct acggcctgcg catgctcatg gcgccgaagg ctgaacaccg gcccgccggg
     5161 aagtgatctg ccaagtgggc tgatcaccgt ttattgccac agatgaacac ggatggacac
     5221 agataagagc cacatcttca tccgtgtcca tctgtgttca tccgtggcca ggccttttta
     5281 gttcactggg cctggatggc cttcaacaac tcgggatccc tgggcagctg gtccacctcg
     5341 gcgagccggg gcacgaggcg tttccagaag ggttcggcgg cgaagacctg cttgaagagg
     5401 ggcagggcct cgtcgcgctt gccgctggag gccagggcca cggcctgcca gaagggcatc
     5461 tcccagacgc cgggggccag cttggacgcg gcctcgtagg cggccttggc ctcggcccac
     5521 ttgccggcgg tcacgaagcc gtcgccctg
//
LOCUS       DASUDT010000450         2599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2119473, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000450 DASUDT010000000
VERSION     DASUDT010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119473"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VFV26_09260"
     CDS             complement(<1..385)
                     /locus_tag="VFV26_09260"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012207360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX4846394.1"
                     /translation="MALSRDQLVRRAAQELRDGYYVNLGIGMPTLVANNIPPGMEVIL
                     QSENGILGLGPFPTEAEVDADLINAGKQTVTTLPGASFFSSADSFSMIRGGKVDLSIL
                     GAMQVSAEGDIANWMVPGAMVKGMGG"
     gene            complement(431..1732)
                     /locus_tag="VFV26_09265"
     CDS             complement(431..1732)
                     /locus_tag="VFV26_09265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846395.1"
                     /translation="MKRPRFRATAISLAAVPAAWAQAPLLQDGAAALRRAQTAWTLGE
                     PPLPPLSLPSFEVGLGGAESDGLYAPLTGGEGLGHGIRGAGLGLQGRYVGGGWSLSAT
                     FLGLREGASTLGILHRAALAYQGESGWRLALEQGPMAWGSGLNGGDLMGDAAPSFPRF
                     SLATPDLELPFGRWRAEAFAGRLEWNRPIPAGAPDREARIAAQASGMDLHRPDLYGGI
                     LRVACGTQVKAAIGAVAMAGGRDTRGQPAPAASQRMVALAELEVRVSALAHLAGAQGA
                     SLHLSRSAAPDDRTLTLGPGRGLAGLRVVWDGWDLGLEYAGAAPPGAPAAFTGPSYLP
                     GFSTHGDPLGPAFGHEAITRTVEWGLPLFLEGQGRLKAVRATSWNPAPGSGFWLLQAE
                     AQWRTSTGRIGAAAVSRREEIPGAPARWGWTFSAFQSFRVF"
     gene            complement(1729..>2599)
                     /locus_tag="VFV26_09270"
     CDS             complement(1729..>2599)
                     /locus_tag="VFV26_09270"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4846396.1"
                     /translation="LGAASPLMLGTLLPAMRRQHPELADQVRTRLLAGPDAIARAAAI
                     EDLPMAPADLDALTRRVWTDTQFETQQTLIHSYGRWKMAPEDQKAQLRPWLQHSNWTC
                     RWEAYQALLKLDPATPWPSAPQPTKTDEAILKEATRLAERGKPVRLRISLSGTRSLTL
                     RLNPTVAPMNVANLVRLARKGYFNGRRVPRVVPDFVVQMGSPFDTMDGGPGHTVRCEN
                     SLAWYGPGSVGMALSGKDTGGSQFFITTNATPHLTGRYTRLGEVEDLDRAMKVLDDLE
                     LGAKILSIKVLEP"
BASE COUNT          362 a          873 c          997 g          367 t
ORIGIN      
        1 ccccgcccat ccccttcacc atcgcgcccg ggaccatcca gttggcgatg tccccctcgg
       61 cggagacctg catcgcgccg aggatcgaga gatcgacctt gccgccgcgg atcatcgaga
      121 acgaatcggc gctggagaag aacgacgcac cgggcagcgt ggtcacggtt tgcttgcccg
      181 cgttgatcag gtccgcgtcg acctccgcct cggtcgggaa cggccccagg ccgaggatgc
      241 cgttctcgga ctggaggatg acttccatgc ccggcgggat gttgttggcg acgagcgtcg
      301 gcatgccgat gccgaggttg acgtagtagc cgtcgcgcag ctcctgcgcg gcacggcgga
      361 caagttgatc gcgggacagc gccattcgga cctcgagggg ccttcaggat aacccagggc
      421 ggggggcggc tcagaacacg cggaacgact ggaaggcgct gaacgtccag ccccagcggg
      481 cgggagctcc cgggatctcc tcccgccgcg agactgcagc ggcgccgatg cggccggtgg
      541 aggtgcgcca ttgggcctcg gcctggagga gccagaagcc gctgccgggc gcgggattcc
      601 agctcgtggc ccgtacggcc ttcaggcggc cctggccctc caggaaaagg ggcaggcccc
      661 attccacggt gcgtgtgatg gcctcgtggc cgaaggccgg tcccagggga tccccgtggg
      721 tggagaaccc tgggaggtag gagggcccgg tgaaggctgc gggggcgccg gggggggcgg
      781 ccccggcata ttcgaggccc agatcccagc catcccagac gacccggagg cccgcgaggc
      841 cgcggccggg gcccagggtg agggtacggt cgtctggggc tgcgctccgg ctgaggtgca
      901 gggaggcgcc ttgggccccg gcgaggtgcg ccagggcgct gacccgcact tccagttccg
      961 ccagggccac catgcgctgg gaggcagcgg gcgccggctg gccccgggtg tcccggccgc
     1021 ccgccatggc cacggccccg atggcggctt ttacctgggt tccgcaggcc acccgcagga
     1081 tcccgccgta cagatccggg cggtggaggt ccatgccgct ggcctgggcg gcgatccggg
     1141 cttcgcgatc aggggctccg gcggggatgg ggcggttcca ttcgagccgg cccgcgaagg
     1201 cctcggcccg ccagcggccg aagggcagtt ccaggtccgg cgtggccagg gagaaccgcg
     1261 ggaaggaggg ggcggcgtcc cccatcagat cccccccgtt caaccccgat ccccaggcca
     1321 tggggccctg ctccagggcc agccgccagc cggattcccc ctggtaggcg agggcggccc
     1381 gatgaaggat tcccagcgtg ctggctccct cccgcaggcc caggaaggtg gccgacaggg
     1441 accagccccc gccgacatag cggccctgga ggcccaggcc ggcgccccgg atgccgtggc
     1501 ccagcccctc gcctccggtc aggggcgcgt agaggccgtc cgattccgca ccgcccagtc
     1561 ccacttcgaa ggagggcagg gagaggggcg gcaggggcgg ttcccccagc gtccaggccg
     1621 tctgcgcccg ccgcagggcg gccgcgccat cctggagcag gggcgcctgg gcccaggctg
     1681 cggggaccgc cgccaggctg atggccgtgg cgcggaatcg cggccgcttc acggttcaag
     1741 caccttgatg gagaggatct tcgcgcccag ctccaggtca tcgaggacct tcatggcccg
     1801 gtccagatcc tccacctcgc ccaggcgggt gtaccggcct gtgaggtggg gcgtggcgtt
     1861 ggtggtgatg aagaactggc tgccgccggt gtccttgccg gacagggcca tgcccacgct
     1921 gccggggccg taccaggcca ggctgttctc gcagcgcacg gtatggccgg ggccgccgtc
     1981 catggtgtcg aagggcgagc ccatctgcac cacgaagtca ggcaccacgc ggggcacccg
     2041 gcggccgttg aagtagccct tgcgggccag ccgcacgagg ttggccacat tcatcggtgc
     2101 cacggtggga ttgagccgga gtgtcaggct gcgcgttccg cttagggaaa tgcgcaggcg
     2161 aacgggtttg ccccgctcgg ccaggcgggt ggcctccttc aagatggctt cgtcagtctt
     2221 cgtgggttgg ggtgcggagg gccaaggcgt agcggggtcc agcttcagca gggcctggta
     2281 ggcctcccag cggcaggtcc agttggaatg ctggagccag ggacgcagct gcgccttctg
     2341 gtcctccggc gccatcttcc agcggccgta gctgtggatg agggtctgct gggtttcgaa
     2401 ctgggtgtcg gtccagacgc gccgggtgag ggcgtcgagg tccgcggggg ccatgggcag
     2461 gtcttcgatg gcggcggccc gggcgatggc gtccggtccg gccaggaggc gcgtccgcac
     2521 ctgatccgcc agctcggggt gctggcggcg catggcgggg aggagcgtgc ccagcatcag
     2581 ggggctggcg gcacccaag
//
LOCUS       DASUDT010000451         5802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2141786, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000451 DASUDT010000000
VERSION     DASUDT010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5802
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2141786"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VFV26_09275"
     CDS             complement(<1..285)
                     /locus_tag="VFV26_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013935707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX4846397.1"
                     /translation="MSLEKKIETLKAKHAQALAGGGEDRVRKQHEGGKLTARERVAAF
                     LDEGSFEEMDALMVHRNWGVEKIPGDGVVTGFGRVDGRPVAIFAQDFTVFG"
     gene            complement(385..2244)
                     /locus_tag="VFV26_09280"
     CDS             complement(385..2244)
                     /locus_tag="VFV26_09280"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF008909.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEX4846398.1"
                     /translation="MDAITSVLRGCEIFSGLSDTDLGLIARAARRREVPAGTCLFTQG
                     EARVRATVIAEGRVEISRDNGDGPEPVVILGPGNVAGEQSFLAVSTHTATGVTLTPAV
                     LLELDREAVLQSLGQDGAAAIAVLSKVANVLHQRILYSATPRTGREQAYASGRVRRES
                     DLIGPMDVPEDALFGVQTLRAVHNFPITGTPTSHFPAMIRALAMVKQGAARANARLGL
                     LEPAIAQAIDTACQEIIDGHWHGHFPTDMVQGGAGTSTNMNANGVIANRALELLGHKR
                     GEYAHCHPNDHVNLGQSTNDVYPTALRLTTIFMLKNLLEAMGRLKAALHAKGNEFSDV
                     IKMGRTQLQDAVPMTLGQEFEAYAVTTGEDIQRLQETARFFLEVNMGGTAIGTGICAD
                     PRYPQVVVEELRKVTGLEIVLAENLVEATPDTGAFVMFSGVVKRAAVKLSKLCNDLRL
                     LSSGPRCGFGEINLPPMQPGSSIMPGKVNPVIPEVVNQVAFQVIGNDLTITLAAEAGQ
                     LQLNVMEPILAYSLATSMRNLTAAVNVLTSKCITGITANRERCLDLVEHSIGIVTAVM
                     PAIGYKRATEVAKEALETGRPVREIILSKGFLNQAELDEALSLEAMTQPRPLR"
     gene            complement(2332..2775)
                     /locus_tag="VFV26_09285"
     CDS             complement(2332..2775)
                     /locus_tag="VFV26_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX4846399.1"
                     /translation="MRRALFAFVAAGLLAQAPVPAPAAKEPAACIFCMIVAGTAPSKK
                     VYEDQHVLAFWDIRPRAKVHLLVIPKQHVASLKELDDLPVETRAALLSACVKVAKGQG
                     ILEDGFRLISNSGSNANQSVFHLHFHVVGGEKLREDAITKDPAKR"
     gene            complement(2775..3422)
                     /gene="fsa"
                     /locus_tag="VFV26_09290"
     CDS             complement(2775..3422)
                     /gene="fsa"
                     /locus_tag="VFV26_09290"
                     /inference="COORDINATES: protein motif:HMM:TIGR00875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEX4846400.1"
                     /translation="MLFFIDTANIDEIKRINALGVLDGVTTNPSLIARETGKPFEAII
                     EEICDIVDGPISAEVIGLEAPAMIQEGLRLAKIHENVVVKLPLIAEGLKACKALTAEG
                     INTNVTLCFSATQALMAAKAGATYVSPFVGRLDDINLDGMELIREIVAIFENYAFDTQ
                     CLAASIRSPRHVTDSALAGAHVATIPTKVFDQMLKHPLTDKGVEGFLADWRKAGR"
     gene            3502..4182
                     /gene="thyX"
                     /locus_tag="VFV26_09295"
     CDS             3502..4182
                     /gene="thyX"
                     /locus_tag="VFV26_09295"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEX4846401.1"
                     /translation="MTNPEIKVLDKGFVRVIDHMGSDLSVVNAARVSFGKQKEAFDEG
                     DAKLVAYLAEHEHTSPFRHTALTLHVKAPIFVFRQWMKHRIGSEFNEISGRYVEFPED
                     EFFVPASFRRQAKVNKQGSEGEIDEANRRRAMESYLESCRGAVAHYKELLSLGVCREQ
                     ARCVLPVALYSEVYWTVSLQAVAHFIRLRSDSHAQWEIQQYAAAVRQVVEPIYPVGLK
                     ALLADRKG"
     gene            complement(4183..>5802)
                     /locus_tag="VFV26_09300"
     CDS             complement(4183..>5802)
                     /locus_tag="VFV26_09300"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEX4846402.1"
                     /translation="LNTHAQVDLSVRPDFGQVEVDQAVLNLGTVETFFPEKRPFFLEG
                     MDLFRVAGPDLFYSRRIGQGLSDPDLAPGETLLDRPNATDITAAAKYTAKYASGTNVG
                     LLGASVEPARAWVLDASGSKVRREISPLSNFGVLRAQQLLDDRGSYVGGFLAEMRQAG
                     PTGRVAEIQAVDGVYKTQDRSGLLEATFSRSEAGPVDAQDQGWRGRLRAHQGWRNGWA
                     VEVQAINAGRLYNPNDIGYLGRADEQRMYLEVYRQWDKGWGVIRSGEAGLDHVAARDQ
                     AGHTFLRNFNAWAKVDFTSFFALWGGGGLDLAAEDDRELRTYTDPQKKYLARGTTPYA
                     NVGFDTPGNRPWHLRVKASRAWQEGGPSTDATLYQNLKPGSNFEIQLSTSVTRDEGEL
                     KWLETPATTPIVGLRRLSQLNQTLRLGYAFNPRFTVQLFSQWLAANWNFRDLKHYEDD
                     HTLAPGLPEDQPAGTSPQTAFSFRTWNLNLITRWEFRPGSTFFLVYTHGTSTDALIND
                     RASLSPRPDLSILRHLPSDDVVQAKVSWLFR"
BASE COUNT          873 a         1815 c         2115 g          999 t
ORIGIN      
        1 gccgaacacc gtgaagtcct gggcgaagat ggccacgggg cggccatcca cgcggccgaa
       61 gcccgtcacc acgccatcgc cggggatctt ctccacgccc cagttgcggt ggaccatgag
      121 ggcgtccatc tcctcgaagg agccctcgtc caggaaggcc gccacgcgct cgcgcgccgt
      181 gagcttgccc ccctcgtgct gcttccggac ccgatcctcg ccaccgccgg ccagggcctg
      241 ggcgtgcttg gctttcaagg tctcgatctt cttttcgagg gacatgggga ctccagggtg
      301 acatgcgact ggcggccgat cagggggatc agccgccagt ttagcccgga gcgggatgct
      361 tccgcaggtc cagcccggtg gaagctaccg gaggggcctg ggctgggtca tggcctcgag
      421 gctgagggct tcgtccagtt cggcctggtt gaggaagccc ttgctgagga tgatctcccg
      481 gaccggccgg ccggtttcca gggcctcctt ggccacttcc gtggcgcgct tgtagccgat
      541 ggcgggcatg acggcggtga cgatgccgat gctgtgctcc accaggtcga ggcaccgctc
      601 ccggttggcg gtgatgcccg tgatgcactt gctggtgagg acgttcaccg cggcggtgag
      661 gttgcgcatg ctggtggcca ggctgtaggc caggatgggc tccatgacgt tcagctggag
      721 ctggccggct tcggccgcca gggtgatggt gaggtcgttg ccgatgacct ggaaggccac
      781 ctggttcacc acctcgggga tcaccgggtt caccttgccg ggcatgatgc tgctgccggg
      841 ctgcatggga ggcaggttga tctcgccgaa gccgcagcgg gggccgctgc tgagcaggcg
      901 caggtcgttg cagagcttgc tgagcttcac ggccgcccgc ttgaccacgc cggagaacat
      961 cacgaaggcg ccggtgtcag gcgtggcttc cacgaggttc tcggccagga cgatctccag
     1021 gcccgtgacc ttgcggagtt cctcgaccac cacctgggga tagcgcggat cggcgcagat
     1081 gcccgtgccg atggcggtgc cgcccatgtt cacttccagg aagaagcggg cggtctcctg
     1141 caggcgctgg atgtcctcgc cggtggtgac ggcataggcc tcgaactcct ggcccagggt
     1201 catggggacg gcatcctgca gctgggtgcg gcccatcttg atgacatcgg agaactcgtt
     1261 gcccttggcg tggagcgccg ccttcaggcg gcccatggcc tccagcaggt tcttcagcat
     1321 gaagatggtg gtgagccgca gggccgtggg gtagacgtcg ttggtgctct ggcccaggtt
     1381 cacgtggtca ttggggtggc agtgggcgta ttccccgcgc ttgtggccca gcagctccag
     1441 ggcgcggttg gcgatgaccc cgttggcgtt catgttggtg gaggtgccgg cgccgccctg
     1501 gaccatgtcc gtggggaagt ggccgtgcca gtggccgtcg atgatctcct ggcaggcggt
     1561 gtcgatggcc tgcgcgatgg cgggctccag gagccccagc cgggcgttgg cgcgggcggc
     1621 gccctgcttg accatggcca gggcgcggat catggcgggg aagtggctgg tgggcgtgcc
     1681 ggtgatgggg aagttgtgga cggcgcggag ggtctgcacg ccgaagaggg cgtcctcggg
     1741 aacatccatg ggcccgatga gatccgattc gcggcggacg cggccgctgg cgtaggcctg
     1801 ctcgcggccc gtgcggggcg tggccgagta gaggatgcgc tggtggagga cattggccac
     1861 cttgctgagc acggcgatgg cggcggcgcc gtcctggccc aggctctgga gcacggcttc
     1921 gcggtcgagc tccaggagca cggcgggggt gagggtcacg ccggtggccg tgtgggtgct
     1981 gacggcgagg aaggactgct cgcccgccac gttgccgggg cccaggatca ccacgggttc
     2041 cggaccatcg ccgttgtcgc gggagatctc cacgcggccc tccgcgatga ccgtggcccg
     2101 cacccgggcc tcgccctggg tgaagaggca ggtgccggcg ggcacctccc ggcggcgcgc
     2161 ggcccgggcg atcaggccga gatcggtatc agacagcccg gaaaagattt cgcaaccgcg
     2221 aaggacagac gtgatggcat ccatgggacc tccggcccgc tcagggccag tggccatggt
     2281 accgggcccc ctggatgatt cggtcacgaa tgccccgggc ggggcccggg ctcaccgctt
     2341 ggctggatcc ttcgtgatgg cgtcctcgcg cagcttttcg ccgcccacca cgtggaagtg
     2401 gaggtggaac acgctctggt tggcgttgct gcccgaattc gagatgagcc ggaagccgtc
     2461 ctcgaggatg ccctgcccct tggccacctt cacgcaggcg ctgaggaggg cggcccgggt
     2521 ttccacgggc aggtcatcca gctccttgag gctggccacg tgctgcttgg ggatcaccag
     2581 caggtggacc ttggcccggg gccggatgtc ccagaaggcc agcacatgct ggtcctcata
     2641 gaccttcttc gaaggcgccg tgccggccac gatcatgcag aagatgcagg cagcaggctc
     2701 cttggcggcg ggcgcgggca cgggcgcctg cgcgagcagg ccggccgcga cgaaggcgaa
     2761 cagggcccgg cgcatcaccg tccagccttg cgccaatccg ccaggaaccc ttccacgccc
     2821 ttgtctgtga gggggtgctt cagcatctgg tcgaagactt tggtggggat ggtggccacg
     2881 tgggcgcccg ccagggcgga atcggtgaca tggcgagggc tgcggatgct ggcggccagg
     2941 cactgggtgt cgaaggcgta gttttcgaag atggccacga tctcgcggat cagctccatg
     3001 ccatccaggt tgatgtcgtc caggcggccc acgaaggggg agacataggt ggcgccggcc
     3061 ttggcggcca tgagggcctg ggtggcgctg aagcagaggg tgacgttggt gttgatgccc
     3121 tcggcggtca gggccttgca ggccttgagg ccctcggcga tgagggggag cttcaccacc
     3181 acgttctcgt ggatcttggc caggcgcagc ccctcctgga tcatggcggg agcctccagg
     3241 ccgatgacct cggcgctgat ggggccgtcc acgatgtcgc agatctcctc gatgatcgcc
     3301 tcgaagggct tgccggtctc cctggcgatg aggctggggt tggtggtcac gccatccagc
     3361 acgcccaggg cattgatgcg cttgatctcg tcgatgttgg cggtgtcgat aaaaaacagc
     3421 atgagtcgct cccggccctg cattcgctgg ccccttccat tctcccaggc ctcgggggaa
     3481 gctggaagcc cggagtctgc catgacaaat cccgagatca aggtgctgga caaaggcttt
     3541 gtccgggtca tcgaccacat ggggtcggac ctgtccgtgg tgaacgcggc ccgggtgtcc
     3601 ttcggcaagc agaaggaggc cttcgacgag ggggacgcca agctggtggc ctacctggcg
     3661 gagcatgagc acacctcgcc cttccgccat acggccctga cgctgcacgt gaaggcgccc
     3721 atcttcgtat tccgccagtg gatgaagcac cgcatcggat cggagttcaa cgagatcagc
     3781 ggccgctatg tggagttccc cgaggacgag ttcttcgttc cggcgtcctt ccggcggcag
     3841 gccaaggtga acaagcaggg cagcgaaggc gagatcgacg aggcgaaccg caggcgtgcc
     3901 atggagagct atctggagag ctgccggggc gccgtggccc actacaagga gctgctgtcc
     3961 ctgggggtct gccgggagca ggcccgctgc gtgctgcccg tggcgctcta ttccgaggtc
     4021 tactggaccg tgagcctcca ggccgtggcc cacttcatcc gcctgcggtc cgacagtcac
     4081 gcccagtggg agatccagca gtacgccgcc gccgtgcgcc aggtggtgga gcccatctat
     4141 cccgtgggac tgaaggccct gctggccgac cgcaagggct gatcagcgga acagccagct
     4201 gaccttcgcc tgcaccacgt cgtccgaggg caggtgccgc aggatggaca ggtcgggacg
     4261 gggcgagagg ctggcgcgat cattgatcag cgcatccgtg ctggtgccgt gggtgtagac
     4321 caggaagaag gtggacccgg gccggaactc ccagcgggtg atgaggttca gattccaggt
     4381 gcggaagctg aaggccgtct gggggctggt cccggcgggc tgatcctcgg gcaggccagg
     4441 cgcgagggtg tggtcgtcct cgtagtgctt caggtcgcgg aaattccagt tcgcggccag
     4501 ccactggctg aacaactgca ccgtgaaacg cgggttgaag gcatagccca ggcgcagggt
     4561 ctggttcagc tggctgaggc gccgcaggcc cacgatgggc gtggtggcag gggtttccag
     4621 ccacttgagc tccccctcgt cgcgggtgac tgaggtcgaa agctggatct cgaagttgga
     4681 accaggcttg aggttctggt agagcgtggc gtcggtggag gggccgccct cctgccaggc
     4741 gcggctggcc ttgacacgga gatgccaggg gcggttgcca ggggtgtcga aaccgacgtt
     4801 cgcgtaaggg gtggtgcccc gggccaggta tttcttctgg ggatcggtgt aggtgcgcag
     4861 ttcgcggtca tcctcggcgg ccagatccag gcccccgccg ccccagaggg cgaagaagct
     4921 cgtgaaatcc accttggccc aggcgttgaa gttccgcagg aaggtgtggc cggcctgatc
     4981 ccgggcggcc acatgatcga gcccggcctc cccgcttcgg atcacccccc agcccttgtc
     5041 ccactggcgg tagacctcga gatacatccg ctgctcatcg gcccgcccca gatagccgat
     5101 gtcgttgggg ttgtacaggc gcccggcgtt gatggcctgg acttccacgg cccagccgtt
     5161 ccgccagccc tggtgggccc tcagccggcc gcgccagccc tggtcctggg catccacggg
     5221 cccggcctcg ctgcggctga aggtggcctc cagcaggccg ctgcggtcct gggtcttgta
     5281 gacgccgtcg acggcttgga tttccgccac gcggccggtg ggcccggcct gccgcatctc
     5341 cgcgaggaat ccgcccacgt agctgccgcg gtcatccagg agctgctggg cccgcagcac
     5401 gccgaaattg gaaaggggag aaatctcccg ccggaccttg ctgccgctgg cgtccagaac
     5461 ccaggcccgg gcgggctcca cgctggcgcc cagcaggccc acgttggtgc ccgaggcgta
     5521 cttggcggtg tatttggcgg cggccgtgat gtccgtggcg ttgggccggt ccagcagggt
     5581 ctcgcccgga gccaggtccg gatccgacag tccttgtcca atgcgccggc tgtagaagag
     5641 atcggggccc gccacgcgga agaggtccat gccctccagg aagaaggggc gcttttcggg
     5701 gaagaaggtc tcgaccgtgc cgaggttcag caccgcctgg tccacctcga cctggccgaa
     5761 atccggccgc acggaaaggt ccacctgggc atgggtgttc ag
//
LOCUS       DASUDT010000452         2046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2075506, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000452 DASUDT010000000
VERSION     DASUDT010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2075506"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VFV26_09305"
     CDS             complement(<1..182)
                     /locus_tag="VFV26_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846403.1"
                     /translation="MISPLGQRQILQTLAAETVRQAMEGGAQVQRELARKRAFDAKLV
                     EAMEDVAEVAETESMKL"
     gene            complement(207..509)
                     /gene="flgM"
                     /locus_tag="VFV26_09310"
     CDS             complement(207..509)
                     /gene="flgM"
                     /locus_tag="VFV26_09310"
                     /inference="COORDINATES: protein motif:HMM:NF016223.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HEX4846404.1"
                     /translation="MRISGKPGGVGSTQGVAGIKGSAMPAAASVAPAPVSDAVQVSSA
                     ARLVALAQEALAVVPDIRLEKVEALKNQLDADAYHPDGEAVAEGLIKEHLAKGRHS"
     gene            complement(553..891)
                     /locus_tag="VFV26_09315"
     CDS             complement(553..891)
                     /locus_tag="VFV26_09315"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HEX4846405.1"
                     /translation="MGPQGLSAADPLLQAQGAQAVPSAGDKTDKAARQFEGLLMGLLF
                     QTMRKTVEPSGLLGDSGQSRSTYEYLMDQAVVDRAVSEGRGWGLADRLKASWTAPEKN
                     GHDKQSLPAS"
     gene            complement(891..2000)
                     /locus_tag="VFV26_09320"
     CDS             complement(891..2000)
                     /locus_tag="VFV26_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEX4846406.1"
                     /translation="MRVAALLFAALALFGADPVKPEKKIESHLRDVARLQGVRGNQLL
                     GYGVVVGLDGSGDKDQTKFTVQSLTNLMARQGLTVNPTTVKVKNVAAVMVTAELPAFA
                     RTGSRLDVTVSSTGDAKSLAGGVLLMTALQGPDGQTYAVAQGPLLVGGFSASAGGASV
                     TKNHPTVGRIPEGGLIEREVGGNFNARGSLRYSLLEEDFTTAVRVVHAINEELGEKAA
                     QPLDARTVDVQIPKDYLGRAVELVARLENLNIQLQPKARVVVNERTGTVILGSDVRIG
                     AVSIVQGGLSIMVSSTPLVSQPAPFSQGKTVTATKKDVAAVEEKPKTLNVEPGVSVGK
                     LAEMLNGMGVSPRDLVAILQAIKESGALQAELRVL"
BASE COUNT          313 a          710 c          658 g          365 t
ORIGIN      
        1 agcttcatgg attccgtttc ggccacctcg gccacgtcct ccatggcctc caccagcttg
       61 gcgtcgaagg cccgtttccg ggccagctca cgctgcacct gggctccgcc ctccatggcc
      121 tgcctcaccg tctccgcggc cagggtctgc aggatttggc gctgtcccag gggactgatc
      181 atgccctcac aacgagggcc ttggggctag gaatggcggc ctttcgccag atgttccttg
      241 atgagccctt cggccacggc ctctccgtcg gggtggtagg cgtcggcatc cagctggttc
      301 ttgagggctt ccaccttctc caaccggata tccgggacga ccgcgagcgc ctcctgggcc
      361 aacgccacaa ggcgggcggc agaggaaacc tggacggcat ccgacacagg ggccggtgcg
      421 acagaagcag ccgccggcat cgcggaaccc ttgattccag ccacgccttg ggtgcttccc
      481 acgccacccg gtttgccact gatacgcatg ttcacctcga caagagccgt atcggcagtt
      541 tgccaagatc cttcaactcg ctgggagact ttgtttgtca tggccgtttt tttcgggcgc
      601 cgtccagctg gccttgaggc gatccgccag cccccaccca cggccctcgg acacggcgcg
      661 atcgaccacg gcctgatcca tcaggtattc gtaggtcgag cgggactggc cggagtctcc
      721 cagcaggccc gagggttcca ccgtcttccg catggtctgg aagagcagac ccatgagcag
      781 gccctcgaac tggcgcgcag ccttgtccgt cttgtccccg gcggaaggca ccgcctgggc
      841 gccctgggcc tggagcagcg gatccgccgc gctgagtccc tgggggccca tcacaggacc
      901 ctcagttctg cctggagggc gccggattcc ttgatggcct ggaggatggc caccagatcc
      961 cgggggctca cgcccatgcc gttgagcatc tccgccagct tgcccacgct gacgccgggt
     1021 tcgacgttga gggtcttggg cttctcctcc accgccgcca catccttctt ggtggccgtg
     1081 accgtcttgc cctggctgaa gggcgccggc tggctcacca gcggggtgga actgaccatg
     1141 atgctgaggc cgccctgcac gatgctcacg gcgccgatgc ggacatcgga accgaggatc
     1201 acggtgcccg tgcgctcgtt caccaccacc cgggccttgg gctgcagctg gatgttgagg
     1261 ttctccaggc gggccaccag ttccacggcc cggcccagat aatccttggg gatctgcaca
     1321 tccaccgtgc gggcatccag gggctgggcg gccttttcgc ccagttcctc gttgatggcg
     1381 tggaccaccc gcaccgcggt ggtgaagtcc tcttccagca ggctgtaccg gagcgaaccg
     1441 cgggcgttga aattcccgcc gacctcccgt tcgatgagcc cgccttcggg aatgcggccc
     1501 acggtgggat ggttcttggt cacggaggcg ccgcccgcgg aggcgctgaa accgcccacc
     1561 agaagaggcc cctgggccac ggcataggtc tggccgtcgg gcccctgcag ggccgtcatc
     1621 agcaggacgc cgccggccag ggacttggcg tcgccggtgc tcgacaccgt cacgtccagc
     1681 cgcgatcccg tgcgggcgaa ggcggggagt tccgccgtca ccatcaccgc agccacgttc
     1741 ttcaccttca ccgttgtggg attcaccgtg aggccctgcc gggccatgag gttggtcagg
     1801 gactgcaccg tgaacttggt ctgatccttg tcgccgctgc cgtccagacc caccaccacg
     1861 ccgtagccca gcagctggtt gccgcgcacg ccctggagac gggccacgtc ccgcagatgg
     1921 gattcgatct tcttctcggg cttgacgggg tcggcgccaa agagggccag ggccgcgaag
     1981 agcagggcag cgacgcgcat ggggaccacc tcagaagggc cagacatagt tgagcaggcg
     2041 gctgat
//
LOCUS       DASUDT010000453         2474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1324196, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000453 DASUDT010000000
VERSION     DASUDT010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324196"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..711)
                     /locus_tag="VFV26_09325"
     CDS             complement(<1..711)
                     /locus_tag="VFV26_09325"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX4846407.1"
                     /translation="MADPRTIGRYQIVRPIGQGGMGTVYLAEDPLLKRRVAIKVVHVS
                     GAARHQATLRFRREAEISAQLNHPNLVMIFDVGVEEDLGPFLAMEYVEGKSLARHIRD
                     RDLDTETSAKVLIQAMRALRAAHRRAIVHRDVKPDNILLSEEGRAKLMDFGIARTMGH
                     MSLSPERPLDFEPMASSEQAIAQTLALRLTSTGDFLGSPAYAPPEVLRGSEGTPASDR
                     YSFAATAFELLTGKLPHPG"
     gene            788..1363
                     /gene="efp"
                     /locus_tag="VFV26_09330"
     CDS             788..1363
                     /gene="efp"
                     /locus_tag="VFV26_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX4846408.1"
                     /translation="MAALLEAIEIKRKMFFELEETPFHCLDVEISTPTARGGQTLVRI
                     KMRNLLTRAVFDKTFKAGDKFKEPDLALAPASYLYSDGDGSHFMDQETYETHTLGESL
                     MGDALDYLTEGLIVQIQKFNGNPIGLQMPSQVELAVTYTEPGARGDTASGNVTKPAKL
                     ETGIEIKVPLFIKEGEKVKVSTETGEFAGRA"
     gene            1510..>2474
                     /gene="rsgA"
                     /locus_tag="VFV26_09335"
     CDS             1510..>2474
                     /gene="rsgA"
                     /locus_tag="VFV26_09335"
                     /inference="COORDINATES: protein motif:HMM:NF015170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase RsgA"
                     /protein_id="HEX4846409.1"
                     /translation="MKKYRLGQSREAQDLDHREAYSGERTADSKRRQRHAERLETGIE
                     SHDPESLLRLPDPAPWMHLPEATLIQRHSQWVDLELADRTVMRATLGGKLKGVRLVCG
                     DRVRYSAVPVEPDDPRFPATLFPRGEGGSPEAQVVAVMPRKTLLKRGGSDDREPWQLI
                     CANADELWICAAVVDPPLRPGLLERGQVLALDAGLTFRVLITKRDRASKKDTLPELDP
                     LRGQGVAIHETSALKGEGLDPLRGLLQGKVVVLVGHSGVGKSTLVNALHPEMALKTGG
                     LTRFGTGKQTTTAARWLALASGGTLVDTPGIRTLSVRGISRALLGP"
BASE COUNT          425 a          851 c          827 g          371 t
ORIGIN      
        1 gcccgggtgg ggcagcttgc ccgtcagcag ctcgaaggcg gtggccgcga aactgtagcg
       61 gtccgaggcc ggcgtgcctt cgctgccccg cagcacctcc ggcggcgcgt aggccgggga
      121 gcccaggaag tcgccggtgg aggtcaggcg gagggccagg gtctgcgcga tggcctgctc
      181 gctgctcgcc atgggctcga aatccagggg ccgctcgggg ctcaggctca tgtggcccat
      241 ggtccgggcg atgccgaaat ccatgagctt ggcccggccc tcttcgctga gcaggatgtt
      301 gtcgggcttc acgtcgcggt gcacgatggc ccggcggtgg gcggcccgca gggcgcgcat
      361 ggcctggatc agcaccttgg cgctggtctc ggtatccaga tcccggtccc ggatgtggcg
      421 ggcgaggctc ttgccctcca cgtattccat ggccaggaag ggccccagat cctcctccac
      481 acccacatcg aagatcatca ccaggttggg atggttgagc tgggcgctga tctcggcctc
      541 gcggcggaac cgcagcgtgg cctggtgccg cgccgcgccg gagacgtgca ccaccttgat
      601 ggccacccgg cgcttgagca gcgggtcttc cgccaggtag acggtgccca tccccccctg
      661 gccgatgggg cgcacgatct ggtacctgcc gatggttctg ggatccgcca tggaactgaa
      721 attctaacca cgggatcccc ttccgaagac gggctagaat ggaggattcg acattctgga
      781 gatccccatg gccgccctgc tcgaagccat cgaaatcaag cgcaagatgt tcttcgaact
      841 cgaagagacg ccttttcact gcctggacgt ggaaatatct acgcccacgg cccggggcgg
      901 ccagaccctg gtccgcatca agatgcgcaa tctcctcacc cgcgccgtct tcgacaagac
      961 cttcaaggcc ggtgacaagt tcaaggagcc ggacctcgcc ctggcccccg ccagctacct
     1021 gtacagcgac ggagacggct cgcacttcat ggaccaggag acctacgaga cacacactct
     1081 gggcgagagt ctcatgggcg atgccctgga ctacctgacc gaaggcctca tcgtgcagat
     1141 ccagaagttc aacggcaatc ccatcggcct gcagatgccc agccaggtgg agctggccgt
     1201 cacctacacc gagcccggcg cccgggggga cacggccagc ggcaatgtca ccaagcccgc
     1261 caagctggag accggcatcg agatcaaggt gcccctcttc atcaaggagg gcgagaaggt
     1321 gaaggtcagc accgagaccg gcgagttcgc gggccgggcc taaagagcca ccacggagac
     1381 actgagaaca cggaggttca cactgagaaa aacaggggga agagaacaac aggcctctcg
     1441 cagaggcatt gcctcttttg tctccgtgct tctttcccgg tgccctccgt gtctccgtgg
     1501 tgaatgccga tgaagaaata ccgcctcggc cagagccggg aggcccagga tctggaccac
     1561 cgggaggcct attccggcga gcggacggcg gacagcaagc ggcgccagcg ccacgccgaa
     1621 cggctggaga ccggcatcga atcccacgat cccgaatccc tgctgcgcct gccggacccc
     1681 gcgccctgga tgcacctgcc cgaggccacc ctcatccagc gccacagcca gtgggtggat
     1741 ctggagctgg cggatcgcac cgtgatgcgg gccaccctgg gcggcaagct caagggcgtg
     1801 cgcctggtct gcggcgaccg cgtgcgctac tcggccgtcc ccgtggagcc ggatgatccc
     1861 aggttcccgg cgaccctctt cccgcggggc gaggggggtt cccccgaggc ccaggtggtg
     1921 gcggtcatgc cgcggaaaac cctgctcaag cggggcggca gcgatgaccg ggaaccctgg
     1981 cagctcatct gcgccaatgc ggacgaactc tggatctgcg cggcggtggt ggatcccccc
     2041 ctgcgcccgg gcctgctgga acggggccag gtgctcgcgc tggatgcggg gctcaccttc
     2101 cgcgtcctca tcaccaagcg cgaccgggct tcgaagaagg acaccctgcc ggagttggat
     2161 cccctgcgcg ggcagggcgt ggccatccac gagacctcgg ccctgaaggg cgagggcctc
     2221 gaccccctgc gcggcctcct gcaggggaag gtcgtggtgc tggtgggcca cagcggcgtg
     2281 ggcaagagca cgctggtgaa tgccctccac cccgagatgg ccctgaagac cggcggcctc
     2341 acgcggttcg gcacgggcaa gcagaccacc accgccgccc gctggctggc cctcgcttcc
     2401 ggcggcaccc tggtggacac ccccggcatc cgcaccctca gcgtccgggg catcagccgc
     2461 gccctgctgg gccc
//
LOCUS       DASUDT010000454         5343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2097629, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000454 DASUDT010000000
VERSION     DASUDT010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097629"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1503)
                     /locus_tag="VFV26_09340"
     CDS             complement(94..1503)
                     /locus_tag="VFV26_09340"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: protein motif:HMM:NF015406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003904 - deoxyribodipyrimidine
                     photo-lyase activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEX4846410.1"
                     /translation="MRSIVWFRGKDLRVADHGPLAEAAAAGEVVPLFVLDPFFFAPQR
                     ARELPHRLQFLLASLKALEAELLRLGSRLLVVSGRSVDVVPRLAAQWQADRVLAHRWV
                     EPFGRERDRRVGEALERQGVAFRLFEGETLLPPGSLRNGQGGMFRVFTPFARACGARL
                     DLEPALAAPRALPPLPAGLGGETVPVPSPENLGLVPNPRLLGGGEAEAQRRLGAFTAG
                     PIADYGTDRDRMDRPGTSRLGADLKFGTLSVRSVWQAAAASGGGESVRRYLNELLWRE
                     FSHHLLWEWPELLERPFRPAFEGFPWREDEAAWEAWTEGRTGYPVVDAAARQLKAEGF
                     VHNRARMVAASFLTKHLLMDYRRGEAHYLRWLTDGDWAANNAGWQWSAGCGCDAQPWF
                     RIFNPVAQGLKFDPDGAYVRRWVPELADCPGAFIHEPWKAPEALRARLDYPGPIVDHA
                     FARARFLAVAKGHLGQGAP"
     gene            complement(1581..2192)
                     /locus_tag="VFV26_09345"
     CDS             complement(1581..2192)
                     /locus_tag="VFV26_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846411.1"
                     /translation="MFRGLLLAAGILRSLAAGTPEAVFTTAALAKDGRIFVSTVTRRP
                     GWEPRAGLFAIHPDTLKRRRIPVPVDLSGRELWALIPLGSGRLLVVSQQTPEDGDALQ
                     VHQVDPGTGLWLRLAILPACVSATEIRLERRRLVFLCEAGGAAPLQEEAVPLPEEAPA
                     PGRLAPEAVEAQAGATRIRFTGLPFAWERLEVVRHGTVRRFRP"
     gene            complement(2204..2716)
                     /locus_tag="VFV26_09350"
     CDS             complement(2204..2716)
                     /locus_tag="VFV26_09350"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX4846412.1"
                     /translation="MVYEAPCLLVASPALLDPNFLHAVVLIVEHDEEGALGIILNRPL
                     PLALAQVSEEGGLDYEGSDEATAWRGGPVDPQRGILLVQGGLPEEEDTVVDLTHFVSH
                     RKDLLESLLNDPQARYRLFLGYAGWSPGQLDQELEAGAWTRRPLVSEWLLHPDPTGLW
                     QVALGSGASG"
     gene            2773..3507
                     /locus_tag="VFV26_09355"
     CDS             2773..3507
                     /locus_tag="VFV26_09355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846413.1"
                     /translation="MRTPPPSHLGALREGFSLLRRHPGLSLGLTLLAMLLAELAPALE
                     LAAGVRPSLLIQALFGFVGMLPLEMYFIPRMQAQLDGETLNHPGNPSATWQTVFDGRW
                     LKAFLARLGLSVAIGLGLVAFLIPGILVLTLFGWGPMRMLLRGDSILESLRWSQAAMA
                     RHWPRVVQAVLAMLLVVVTYQMAAGWALDRLFPNLDPALGPGALLRLKHPAFWVFNLL
                     GGALNLWLSCALLALYHRLETSVQKA"
     gene            complement(3515..4579)
                     /locus_tag="VFV26_09360"
     CDS             complement(3515..4579)
                     /locus_tag="VFV26_09360"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HEX4846414.1"
                     /translation="MTETQQILSTLSRLVGCTPLLALDVRYRGQARRIYAKAENFNFT
                     GSIKDRMALHILRKAHETGALKPGAPIAEATSGNPGISFAALGRALGHPVTIFMPDWM
                     SQERKDLIRSFGAQIRLVSAAEGGFLGSIQLSEAWAAETPGAFLPCQFANAANVEAHA
                     ATTGPEILAQLASMGLKPQAFVAGVGTGGTVMGVGRCLKALDPGVRIHPVEPSNSPTL
                     HTGHKVGKHRIQGISDEFIPAIVKLDQLDSILSVDDGDAILMAQKLAHRGLGVGISSG
                     ANFLAALQAQDQLGPDAVVVTVFSDSNKKYLSTDLMKAEAVKEGFLSPEVELLGIGQA
                     IRVCGICVQGGPRVRDCGCC"
     gene            complement(4667..4882)
                     /locus_tag="VFV26_09365"
     CDS             complement(4667..4882)
                     /locus_tag="VFV26_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846415.1"
                     /translation="MKVWARINHVGWVHLWRREEDFLAAEPSAHFLNGRTDPRWAEAP
                     LTPEQRGRLEAGDLVEIEDPGFFEDED"
     gene            complement(4879..>5343)
                     /locus_tag="VFV26_09370"
     CDS             complement(4879..>5343)
                     /locus_tag="VFV26_09370"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HEX4846416.1"
                     /translation="TLSDRASRGEYQDQSTPLLTSWLKGQGVKAVTASLMPDDPEALE
                     ADLRAAVASGAPLVLTCGGTGFGPRDTTPEATRRVMEREAPGVCELIRAKGGHPLAFA
                     SRAVCGIAGRTVILNLSGRPAAALEQIQLAWPLLRHAVSVLRKEGEAGGPCT"
BASE COUNT          784 a         1970 c         1831 g          758 t
ORIGIN      
        1 ggtttcttgc cgtcgaagcg gatggtgtgc atgcaatacc cataagtcaa taaagcaaaa
       61 gggatacgat caaaaccggc tcccttcact gtatcagggc gccccctgcc ccagatgccc
      121 tttcgccacc gccaggaagc gcgcccgggc gaaggcgtgg tccacgatgg gcccggggta
      181 gtcgagccgg gcgcgcaggg cctccggcgc cttccagggc tcatggatga aggcgccggg
      241 acagtccgcc agctcgggca cccagcgcct cacgtaggcg ccgtcgggat cgaacttcag
      301 cccctgggcc acggggttga agatgcggaa ccagggctgg gcgtcgcagc cgcagcccgc
      361 gctccactgc cagccggcgt tgttcgcggc ccagtcgccg tccgtgagcc agcgcaggta
      421 gtgggcttcg ccgcgccggt agtccatcag caggtgcttg gtgaggaagc tggccgccac
      481 catgcgggcc cggttgtgga cgaagccctc ggctttcagc tgccgggcgg ccgcgtccac
      541 cacggggtag cccgtgcggc cctcggtcca ggcttcccag gcggcctcgt cctcgcgcca
      601 ggggaagccc tcgaacgcgg gccggaaggg ccgctccagc agctccggcc attcccacag
      661 caggtggtgg ctgaactccc gccacagcag ctcgttgagg tagcgccgca cggattcccc
      721 acccccggaa gcggcggcgg cctgccagac gctgcgcacc gacagtgtgc cgaacttcag
      781 atccgcgccg agccgcgagg tgccgggccg gtccatgcgg tcccggtccg tgccgtagtc
      841 cgcgatgggg cccgccgtga aagcccccag ccggcgctgg gcctcggcct ccccgccccc
      901 cagaagccgc ggattgggga caagccccag gttctccggt gagggcaccg gcaccgtttc
      961 cccgccgaga ccggccggca ggggcggaag ggcgcgcggc gcagccaggg ccggctccag
     1021 gtccagcctg gccccgcagg ccctggcgaa gggcgtgaac acccggaaca tgccgccctg
     1081 gccgttccgc agggagcccg gcggcagcag ggtctccccc tcgaacagac gaaaggccac
     1141 gccctggcgt tccagggcct cgcccacgcg ccggtcccgc tcgcggccaa agggctccac
     1201 ccaacgatgg gccagcacgc gatccgcctg ccactgggcc gccaggcgcg gcaccacgtc
     1261 cacgctgcgg cccgacacca ccagcagccg cgagcccagg cggaggagct ccgcctccag
     1321 ggccttcagc gacgccagca ggaactgcag gcggtgcggc agctcccggg cccgctgcgg
     1381 cgcgaagaag aagggatcca gcacgaagag cggaaccacc tcccccgcgg ccgccgcctc
     1441 cgccagcggc ccgtggtccg ccacccgcag gtccttgccc cggaaccaca cgatggaacg
     1501 catgggatga gcctacatcc cgcaaccggg gcgaccctcg ggagaaacct ggacgcgggc
     1561 ctccgcctcc ggagagcttc tcagggcctg aacctcctga cggtcccgtg gcggaccacc
     1621 tccagccgtt cccacgcgaa ggggaggccc gtgaaccgga tccgggtggc ccccgcctgg
     1681 gcctcgaccg cttcgggagc caggcgtccc ggggccgggg cctcctccgg gagggggacc
     1741 gcctcctcct ggaggggggc tgccccaccg gcttcgcaca ggaacacgag ccgcctccgc
     1801 tccaggcgaa tctccgttgc ggagacgcag gcgggcagta tcgccaggcg gagccacagg
     1861 ccagtcccgg ggtccacctg atggacctgg agcgcatccc catcctcggg ggtctgctgg
     1921 ctgacaacca ggagccgccc actccccagg gggatgaggg cccacagttc ccggccggac
     1981 aggtccacgg gaacgggtat gcggcggcgc ttcaaggtgt ccgggtggat ggcgaagagg
     2041 cccgctctcg gttcccagcc aggtctgcgg gtgacggtgg agacgaagat ccggccgtcc
     2101 ttcgccaggg ccgcggtagt gaataccgcc tccggggtgc cggccgccag gctccgaagg
     2161 attcccgcgg ccagcaggag ccccctgaac aagccaggtc ccctcatccg ctggctccgc
     2221 ttcccagcgc cacctgccac aggcccgtgg gatcgggatg gagcagccac tcggacacca
     2281 ggggccgacg cgtccaggcg cccgcctcca gctcctggtc cagctggccc gggctccagc
     2341 ccgcgtagcc cagaaagagg cggtagcggg cctgggggtc gttcagcagg gactccagca
     2401 gatccttgcg gtggctcacg aaatgggtga gatccaccac ggtgtcctcc tcctcgggca
     2461 ggccgccctg caccaggaga atgccccgct ggggatccac ggggccgccg cgccaggccg
     2521 tggcctcgtc ggaaccctca tagtccaggc cgccctcctc gctgacctgg gccagggcca
     2581 agggcagcgg acggttgagg atgatcccca gggccccctc ctcgtcgtgc tcgacgatca
     2641 gcaccaccgc gtggaggaag ttggggtcca ggagcgcagg actggccacc aggaggcagg
     2701 gggcttcgta caccatgatg ccgacgatga tagcccaccg ccttcatccg cgggcccgga
     2761 tagcctggaa ggatgcgcac gcccccgccc tcccacctcg gcgccctccg cgaaggcttc
     2821 tccctgctcc gccgccaccc gggcctcagc ctcggcctga ccctgctggc catgctcctg
     2881 gcggaactcg ccccggccct ggaactggcg gctggcgtga ggcccagcct gctgatccag
     2941 gccctgttcg gcttcgtggg catgctcccc ctggagatgt atttcatccc ccggatgcaa
     3001 gcccagctcg acggggagac cctcaatcac cctggcaacc cctcggccac ctggcagaca
     3061 gtcttcgacg gacgctggct caaggccttc ctcgcccgcc tgggcctcag cgtggccatc
     3121 gggctgggcc tggtggcctt cctgatcccg ggcatcctcg tcctcaccct gttcggctgg
     3181 ggccccatgc gcatgctgct ccggggcgat tccatcctgg aatccctgcg ctggagccag
     3241 gccgccatgg cccggcactg gccgcgggtg gtccaggcgg tgctcgccat gctgctggtg
     3301 gtggtgacct accagatggc cgcgggctgg gcgctggacc gcctcttccc caatctggat
     3361 cccgccctgg ggccaggggc gctcctccgc ctgaagcacc cggccttctg ggtcttcaac
     3421 ctgctgggcg gggccttgaa cctctggctc agctgcgccc tgctggccct ctaccaccgg
     3481 ctggagacgt ccgtccagaa ggcctagacc ggccctagca gcagccgcag tcccggaccc
     3541 tcggcccgcc ctggacgcag atcccgcaga cccggatggc ctgcccgatg cccagcagct
     3601 ccacctccgg gctgaggaag ccctccttca cggcctccgc cttcatgagg tccgtggaga
     3661 ggtacttctt gttgctgtcg ctgaagaccg tcaccaccac ggcatcgggg cccagctgat
     3721 cctgggcctg gagggccgcc aggaagttcg cgccgctgct gatgcccacg cccaggccgc
     3781 ggtgcgccag cttctgggcc atgaggatgg catcgccgtc gtccacggag aggatgctgt
     3841 ccagctggtc cagcttcacg atggcgggaa tgaattcgtc ggagatgccc tggatgcggt
     3901 gcttcccgac cttgtggccc gtgtgcaggg tgggcgaatt cgagggctcc acgggatgga
     3961 tccggacgcc cggatccaag gctttgaggc agcggcccac ccccatcacc gtgccgccgg
     4021 tgcccacgcc cgccacgaag gcctggggct tcaggcccat ggaggccagc tgggccagga
     4081 tctccggccc cgtggtggcg gcgtgggcct ccacattggc cgcgttggcg aactggcagg
     4141 gcaggaaggc gccgggcgtc tccgcggccc aggcctcgct gagctggatg gaacccagga
     4201 agccgccctc ggcggcgctc accaggcgga tctgggcgcc gaaggagcgg atcaggtcct
     4261 tgcgctcctg gctcatccag tcgggcatga agatggtcac gggatgcccc agggcccggc
     4321 ccagggccgc gaaggagatg cccgggttgc cgctggtggc ctcggcgatg ggcgcccccg
     4381 gcttgagggc ccccgtctcg tgggccttcc gcaggatgtg cagcgccatg cggtccttga
     4441 tgctgcccgt gaagttgaag ttctcggcct tggcgtagat gcgccgggcc tggccgcggt
     4501 accggacatc cagcgccagg aggggcgtgc agcccaccag gcggctcagg gtgctcagga
     4561 tctgctgggt ctcggtcatg cggtcggcct catcatgggg ttggcctcaa acatcgcatg
     4621 gcgaggcgtc cctgcccaga ccgaaccccc atgaacctgg ccggtttcaa tcctcatcct
     4681 cgaagaagcc gggatcctcg atctccacca ggtcgcccgc ttccaggcgt ccccgctgct
     4741 ccggcgtcag gggcgcctcg gcccagcgcg gatccgtacg gccattgagg aagtgggccg
     4801 agggctcggc ggcgaggaaa tcctcctccc ggcgccagag gtgcacccag cccacgtggt
     4861 tgatgcgcgc ccagaccttc acgtgcaggg gcccccggcc tcgccttcct tgcgcagcac
     4921 ggacacggca tgcctgagca ggggccaggc cagctggatt tgctccaggg cggcggcggg
     4981 ccggcccgac aggttcagga tcaccgtgcg cccggcgatg ccgcataccg cccggctggc
     5041 gaaggccaag gggtgcccgc ccttggcccg gatgagctcg cagacgcccg gggcttcgcg
     5101 ttccatgacc cggcgcgtgg cctccggcgt ggtgtcccgg gggccgaagc ccgtgccgcc
     5161 gcaggtcagc accagggggg ccccagaggc cacggcggcc cgcagatccg cctccaacgc
     5221 ctcaggatcg tccggcatca acgaggccgt tacggccttc acgccctggc ccttgagcca
     5281 ggaggtcagc aggggcgtgg actggtcctg gtactcgccc cgggaggcgc ggtccgacag
     5341 cgt
//
LOCUS       DASUDT010000455         9172 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_683605, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000455 DASUDT010000000
VERSION     DASUDT010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 9172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9172
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683605"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VFV26_09375"
     CDS             complement(<1..563)
                     /locus_tag="VFV26_09375"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX4846417.1"
                     /translation="MTSLFDAHSHLPKPGSAEDLASLRVVCGTCESDWEAVLAHADGD
                     GRVLPMLGLHPWFVAEASPSWALRLESLLRSRPAGVGECGLDFAREGADREGQAAAFR
                     LQLRLAHQLRRPVAMHVVKAWGPLLELLREEGVPPAGALVHAYSGSPETAQTLQAMGV
                     LLSFSGDLRHPDRSKPREALRVVDSSHL"
     gene            667..743
                     /locus_tag="VFV26_09380"
     tRNA            667..743
                     /locus_tag="VFV26_09380"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:701..703,aa:Arg,seq:cct)
     gene            complement(839..1915)
                     /locus_tag="VFV26_09385"
     CDS             complement(839..1915)
                     /locus_tag="VFV26_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846418.1"
                     /translation="MKWRLLALLAVFALDSFAPLHGQGWDPTRTAGGWAFQEVDGSLV
                     FFDPAARSLRTWMKGSGLLATLPVALPEVRKAAPAARSATVAPPRATSDYDAAGALLY
                     GIPRRQRAQPAAVAPAVKEAPEAAASEALPERWVIDSYSRTWMVCDGRLVVFSKDGQI
                     ENALALPAAVEDMAVGREGILILYRTAKPCLEKRDLRTGAVVWSYGDRDQLKEASAQP
                     LLVPLNRMALGMDGTVYVAEGASLAFTVLDPIKGPRDPGQTFFTCQDAIPGRAALGRV
                     GRGPLLSWAGKDVIFGVFTPSQVKSCGAPESKGLVLARFDLMNGALEWLPTPLAEGHR
                     LVGLLDHEAVFLAPGGGLAYAPIR"
     gene            2077..2514
                     /locus_tag="VFV26_09390"
     CDS             2077..2514
                     /locus_tag="VFV26_09390"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
                     /protein_id="HEX4846419.1"
                     /translation="MAVIRSQLKDEVFMNMALELSRLGTCCRLQVGAVLLRADGGIAA
                     AGFNGALPGMPHCTPETCRPGQRCLHTSHAEENALGFCDGPVATAYVTHEPCLICCRA
                     LVRRGVRRVVFRHPYSSIAEQERAERQHILEHFGVRWEQHAEA"
     gene            2570..5260
                     /gene="fdhF"
                     /locus_tag="VFV26_09395"
     CDS             2570..5260
                     /gene="fdhF"
                     /locus_tag="VFV26_09395"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEX4846420.1"
                     /translation="MTGTLIRLRVNGRDVVSAQGTMLLESCRQNGIEIPTLCSDPRLK
                     PASSCRLCEVEVAGRERPPCACATPVEEGMVVETHTADLEAFRRTMLERLAAGIPAED
                     PARLAGKPFRRLLEAYGVEPSGARRPEAQHPVHPYLDVDLSWCVACGRCVRICGEVQG
                     QDVWTFTGRGDGLGVAPQLASGLRASDCVSCGACADTCPTGAIEDVSRRLAGLPDRWV
                     RTTCPYCGTGCEMKVGVKDGRISEARPVLEAPVSRGHLCVKGRYGWGFNDAPDRITEP
                     MIRRGGAWKAATWDEALAAAASAFRRARAEGGPGAVGVLASSRSTNEENYLTQKFARL
                     ALGTHNVDCCARVCHAPSAAGLGQAFGTGAATNSYDDIERAALFLVVGANPTENHPIV
                     GTRIRQRVRAGVPLIVIDPRRTELAELATVHLALRPGTNLPLLQAMANLILAEGLADM
                     AFLAARTEGLESFAASLREWTPERAGALCGIEPEAIRTAARLYATSGPAMIFHGLGIT
                     EHRQGTDGVTALAHLALLTGNVGIPGAGVNPLRGQNNVQGSAQMGCEPSRLTGYQKVA
                     QARDIHARVWGAALPEGPGLNALEMIDAAGAGRLKALLVIGYDPLLSHPEARETAQNL
                     NGLDALVVVDLFLTETAKAFGTVFLPAASPFEKEGTFMNGERRVQRVRQVVPPKEGSR
                     TDMAILAALAERLGAGPHFRHPDASAVWDEARQVWPAIAGISHARLDRDGGLQWPCPR
                     EDHPGTAVLHGEGFAAGRAAFRPLAWTPSLEGTDDEYPFLLNTGRSLFHFNAATMTSR
                     TRNRDLRADDELELHPEDAAELGIAAGAPVHVQSRHGSFTLRARLTDRVRRGEPFATF
                     HAVAAFVNQATGPGRDAVTGTPEYKVTAVNLRVAAPAEVR"
     gene            5269..5919
                     /locus_tag="VFV26_09400"
     CDS             5269..5919
                     /locus_tag="VFV26_09400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HEX4846421.1"
                     /translation="MLSHATSPDPRPFRGNRFLQVLCGLYALVWAVTAIRPLYPGDWL
                     MENLLVVLAVGGLAWTHRRFPLSDLSYLLIALFLALHAVGAHYTYSNVPLGFWMKAQW
                     GLARNPFDRIVHFSFGLLLAYPVREVFMRVAHTRGFWNYYLPLDVVLAASAVYEIIES
                     TTARLSAPELGDAFLGTQGDIWDAQKDMTAAAAGALLTMLVVALARRLNRMPEPQG"
     gene            complement(5922..6875)
                     /locus_tag="VFV26_09405"
     CDS             complement(5922..6875)
                     /locus_tag="VFV26_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846422.1"
                     /translation="MSMDAWILGAPLKVLRREDHPYRETTLATLGRHELGLSRRQTPA
                     AQPGCEIFLDGRSIFLPGAPAPDRAWFDLCRELGYEPAHHWDWDPALILFQQVLPVLA
                     ADWHEPPLDLDAQGLPEGVLSLAGLRQVFAEAVSGLRRDGLSPVGAKVAETFEWLPLR
                     AVVFHDDAQLPLDFEGSGPCGRVSLWLGIHRDRAVALDGPAPGGTGQRRWVPGSSETL
                     PPARAFLTAAGLDPEPPKGFEPAFESALHHLCHQLEGPLDAYRRTYPVGIPWHRDRRE
                     RLLGRTIVDVRAGDPPMLVLDDGTEVALDPGPVPSWEHGGI"
     gene            complement(6952..9060)
                     /locus_tag="VFV26_09410"
     CDS             complement(6952..9060)
                     /locus_tag="VFV26_09410"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HEX4846423.1"
                     /translation="MKPFLLPALVLSLASAHAAQPPLRIGLDTQATEWIVSLEGGGQV
                     CDRAGRPLLKLAPDEKLRIWWDSRGVSDPTSEYRVQVGRPHTAAEAAALMKRLKALGE
                     APDRVKVPDAETWRVLTGHFAAAQEAEPVLQKLQDLGFDELWVASESRGAAPRKGRAL
                     YAITDRYERRALPQDGLWLKPTGELTSLQGKGRYRGKVEIFPNAQGRLTVVNTLDLET
                     YLRGVVPKEMGAWEFPSLEALKAQAVAARTYAVANRGKRAADGFDMGDTVADQVYGGR
                     DGEQALTDRAIQETEGLFATYGGKPILALFMANCGGHTVDVAHVFGGDAPYLKAAPCY
                     PANPLTLPFASGVPVTAEAQQPWLTWDLLRLAAGIVPVEWLSGERLARPATAEDLSIP
                     LRALQERLGIEPAPLARDGGLTLALARALGFHRVVEGQERPQDAAYFLPPGVPAGDRL
                     LAAFLTRRGIVPPALWAAREPLTLRQALAALGRLWNDLDPLVPGEGSLLMDRQVRRKR
                     GGPEPLPLSPNLLLAEEAPDGSLRLLPKAPIQVGDRLRWIPAEDGSAAVLVRRLDPDG
                     AAWDRYNPTAHWRVEYAEADLLALVRRRIKVAGIRELRAQYNEEGRVLDLTLVDSQGA
                     PHRVRGMHIRGLLGLKDNVFRWITLGRGDQRRWVFYGRGWGHGVGMCQTGAYGMALEG
                     ATFQQILAHYYPGTDLRRTD"
BASE COUNT         1354 a         3146 c         3369 g         1303 t
ORIGIN      
        1 agatggctgg aatccacgac ccgcagggcc tcccgcggtt tcgagcggtc cgggtgccgg
       61 aggtcgccgg agaaggagag gaggacgccc atggcctgga gcgtctgggc ggtttccggg
      121 ctgcccgagt aggcgtggac cagggcgccc gcgggcggca cgccctcctc gcgcagcagc
      181 tccagcaggg ggccccaggc cttcaccaca tgcatggcca cgggccgccg cagctggtgg
      241 gccaggcgca gctgcaggcg gaaggccgcg gcctggcctt cccggtcggc gccttcccgg
      301 gcgaagtcca gcccgcattc cccgacaccc gccgggcggg accgcaggag agactccagc
      361 cggagcgccc agctcggcga ggcctccgcc acaaaccagg ggtgcaggcc cagcatgggg
      421 agcacccggc catcgccgtc cgcatgggcc aggaccgcct cccagtccga ttcgcaggtg
      481 ccgcagacga cgcggaggct ggccaggtct tcagcgctgc cgggtttcgg cagatggctg
      541 tgggcgtcga agagggacgt catggggctg agtctagacc gggatggcag gccgtggggc
      601 acccgcgcgg gaggggaggc cacagccggg gcacaactgc taatctggaa gctgctaagt
      661 gccgtgggtc ccgtagctca gctggataga gcagctccct cctaaggagc aggtcgtgcg
      721 ttcgaatcgc atcggggcca ccatttgggt tggttcttct cccttctttt cacgtccgaa
      781 cagaagctcc tcggagcttc tgttcgcatg cggaaaagat ggaagggacc tggtgcgatc
      841 agcggatggg ggcgtaggcc aggccgccgc cgggggcgag gaagacggct tcgtggtcga
      901 ggaggccgac gaggcgatgg ccttcggcga ggggtgtcgg cagccactcc agggcgccgt
      961 tcatcaggtc gaagcgggcc agcacgaggc ccttggattc gggcgcgccg caggacttga
     1021 cctggcttgg ggtgaagacg ccgaagatca cgtctttgcc ggcccaggag agcagggggc
     1081 cccggcccac ccgtcccagt gcggcgcggc ccgggatggc gtcctggcag gtgaagaagg
     1141 tctggcccgg gtccctgggg cccttgatgg ggtcgagcac cgtgaaggca aggctggcgc
     1201 cctcggcgac atagaccgtc ccatccatgc ccagggccat gcggttgagg ggcaccagca
     1261 ggggctgggc cgaggcctcc ttcagctggt cgcggtcgcc gtaggaccag accacggcgc
     1321 cggtgcggag gtcccgcttc tccaggcagg gtttggcggt gcggtagagg atgaggatgc
     1381 cttcccggcc cacggccata tcctcgaccg ccgcgggaag ggccagggcg ttctcgatct
     1441 ggccgtcctt gctgaatacc accaggcgcc catcgcagac catccaggtc cggctgtagg
     1501 aatcgatcac ccagcgttcg ggcagggcct cgctggcggc ggcctccggg gcctccttga
     1561 cagcgggggc cacggcggcg ggctgggctc gctggcggcg cggaatgccg taaagcagcg
     1621 cgccggccgc atcgtagtcc gaggtggcgc gaggcggggc gacagtcgcg gacctagccg
     1681 ccggggcggc cttccggacc tcgggaaggg ccacgggcag cgtcgccagc aggccgctgc
     1741 ccttcatcca ggtccgaagg gaccgggcgg ccggatcgaa gaagaccaga gacccatcca
     1801 cttcctggaa ggcccatcct cccgccgtgc gggtgggatc ccagccctgg ccgtgcaggg
     1861 gagcgaagct gtcgagggcg aagaccgcaa ggagggccag aaggcgccat ttcatatatc
     1921 acctgcctat attttattat gcgcattcag gacttccaca aaacccttca tgctgtgact
     1981 gggagcacga tttattccaa ggacatctgt gtccattgag ttacccccga ggggggcagg
     2041 accccgggat tcttgcgatg atggagccat cccgaggtgg ccgtgatccg atcgcagttg
     2101 aaggacgaag tcttcatgaa catggcgctg gaactcagcc gcctggggac ctgctgccgc
     2161 ctccaggtgg gagcggtgct gctgcgggcc gatggcggca tcgcggcggc gggcttcaac
     2221 ggggcgctgc cgggcatgcc ccactgcacg ccggagacct gcaggccggg ccagcgctgc
     2281 ctgcacacga gccatgcgga ggagaacgcg ctgggcttct gcgacggccc cgtggccacg
     2341 gcctacgtca cccacgagcc ctgcctcatc tgctgccggg ccctcgtgcg ccggggcgtg
     2401 cggcgggtgg tgttccggca tccctacagc agcatcgcgg agcaggagcg cgccgagcgc
     2461 cagcacatcc tggaacactt cggcgtgcgc tgggaacagc acgcggaggc ttgaagtcgg
     2521 gaaggggagg cgcatactgc ggagcgccct tcctgttgga gacaagccgg tgactggaac
     2581 cctcatccgc ctgcgggtga atggccgcga tgtcgtgtcg gcccagggga ccatgctgct
     2641 ggagtcctgc cgccagaacg gcatcgagat tcccaccctg tgttcggacc cgcggttgaa
     2701 acccgcctcc agctgccgcc tgtgcgaggt cgaggtggcg ggccgggagc gccccccctg
     2761 cgcctgcgcc acgccagtgg aggaggggat ggtggtggag acccacaccg ccgatctgga
     2821 ggccttccgc cgcaccatgc tggaacggct cgccgccgga attcccgcgg aagatccggc
     2881 ccggctggcg ggcaagccct tccgccggct gctggaggcc tacggcgtgg agccctcggg
     2941 cgcgcggcgg ccggaggcgc agcacccggt ccatccgtac ctggacgtgg acctgtcctg
     3001 gtgcgtggcc tgcggccgtt gtgtgcgcat ctgcggcgaa gtgcaggggc aggatgtctg
     3061 gaccttcacc gggcgcggag acgggctggg ggtggcgccg cagttggcgt cggggttgcg
     3121 ggccagcgac tgcgtgagct gcggggcctg cgcggacacc tgccccacgg gcgccatcga
     3181 ggatgtctcc cggcggttgg cgggccttcc ggatcgctgg gtgcgcacca cctgccccta
     3241 ctgcggcacc ggctgcgaaa tgaaggtggg cgtcaaggac ggccgcatct cggaagcgag
     3301 gcccgtcctg gaggccccgg tgagccgcgg ccacctctgc gtgaagggcc gctacggctg
     3361 gggcttcaat gacgcgccgg accgcatcac ggaacccatg atccgccgcg gcggggcctg
     3421 gaaggccgcc acctgggatg aggcgctggc ggcggcggcc tcggcgttcc ggcgggcccg
     3481 cgcggaaggc ggccccggcg ccgtgggcgt gctggcctcc agccgttcca ccaatgagga
     3541 gaactacctg acgcagaagt tcgcgcgcct ggcactgggc acccacaacg tggactgctg
     3601 cgcccgggtc tgccatgcgc cgagcgcggc gggcctgggc caggcctttg gcacgggcgc
     3661 ggccaccaac agctacgacg acatcgaacg ggccgcgctg ttcctggtgg tgggcgccaa
     3721 tcccacggag aaccatccca ttgtgggaac gcggatccgc cagcgggtgc gggcgggcgt
     3781 gccgctcatc gtgatcgatc cccggcgcac ggagctggcg gagctggcca cggtccacct
     3841 ggccctgcgg cccggcacga acctgcccct gctccaggcc atggcgaacc tgatcctggc
     3901 cgaggggctg gccgacatgg ccttccttgc ggcccgcacc gaggggctgg agtccttcgc
     3961 cgcctcgctg cgggaatgga cgccggagcg ggcgggcgcc ctctgcggga tcgagccgga
     4021 ggccatccgc accgcggcgc ggctctacgc cacctcgggg cccgccatga tcttccacgg
     4081 cctgggcatc accgagcacc gccagggcac ggacggcgtg actgccctgg cccatctcgc
     4141 gctgctcacc gggaacgtgg gcattcccgg cgccggcgtg aatccgctgc gaggccagaa
     4201 caacgtccag ggcagcgccc agatggggtg cgaaccgtcg cggctcacgg gctaccagaa
     4261 ggtggcccag gcccgggaca tccatgcgcg ggtctggggc gcggcgctgc ctgaagggcc
     4321 gggcctcaat gccctggaga tgatcgatgc cgcgggtgca ggacggctga aggcgctgct
     4381 ggtgatcggc tacgatcccc tgctgagcca cccggaggcc cgggagacgg cgcagaacct
     4441 gaacgggctc gatgccctcg tggtggtgga cctcttcctc acggaaaccg cgaaggcctt
     4501 cggcacggtc ttcctgcctg ccgccagccc cttcgagaag gagggcacct tcatgaacgg
     4561 cgagcggcgc gtccagcgag tccgtcaggt ggtgccgccg aaggagggga gtcgcacgga
     4621 catggccatc ctcgccgcgc tggcggaacg gctgggcgcg ggcccgcatt tccgccaccc
     4681 ggatgcctcg gcggtgtggg acgaggcccg ccaggtctgg cccgccatcg cgggcatcag
     4741 ccacgcccgc ctggatcggg acgggggcct ccagtggccc tgtcccagag aggaccatcc
     4801 cggcaccgcc gtgctgcacg gggagggctt cgccgcgggc cgggcggcct tccgccccct
     4861 ggcctggacg cccagcctcg aagggaccga cgacgaatac cccttcctgc tgaacaccgg
     4921 gcgcagcctc ttccacttca acgccgccac catgaccagc cggacccgga accgcgatct
     4981 gcgggcagac gacgagctgg agcttcaccc ggaggatgcg gcggaactgg ggatcgccgc
     5041 aggggcgccg gtgcacgtgc agagccgcca cggatccttc accctccgcg cccgcctcac
     5101 ggaccgggtg cggcggggcg aacccttcgc cacgttccac gccgtggcgg ccttcgtgaa
     5161 ccaggccacg gggccgggcc gggatgcggt cacgggcacg ccggaataca aggtcacggc
     5221 ggtgaacctc cgcgtcgcgg cccctgcgga ggtccgataa cctggggcat gctcagccat
     5281 gcgaccagcc ctgatccccg gcccttccgc ggaaaccggt tcctccaggt tctgtgtggc
     5341 ctctatgccc tcgtctgggc ggtgacggcc atccggcccc tctatccggg tgactggctc
     5401 atggagaacc tgctggtggt cctggcggtc gggggcctgg cctggaccca ccgccgcttt
     5461 ccgctgtcgg acctgagcta cctgctgatc gcgctgttcc tggccctgca tgcggtgggg
     5521 gcccactaca cctactccaa cgtgcccctg ggcttctgga tgaaggccca gtgggggttg
     5581 gcgcggaatc ccttcgaccg catcgtccac ttcagcttcg gtctgctgct ggcctatccg
     5641 gtgcgggaag tgttcatgcg ggtggcccac acccgcggtt tctggaacta ctacctgccc
     5701 ctggacgtgg tgctggcggc ttccgccgtc tacgagatca tcgaaagcac cacggcccgc
     5761 ctcagcgcgc cggagctggg ggatgccttc ctgggtaccc agggggacat ctgggatgcc
     5821 cagaaagaca tgaccgccgc ggcggccggg gccctgctca ccatgctggt ggtggccctg
     5881 gcgcggcggc tgaaccggat gccggaaccc cagggctgag ttcagatccc gccgtgctcc
     5941 caggagggca cggggcccgg atccagggcc acctcggtgc cgtcgtccag caccagcatg
     6001 ggcggatcgc ccgcgcgcac gtccacgatg gtgcggccca ggaggcgctc ccgtcggtcc
     6061 cggtgccagg ggatgcccac ggggtaggtg cggcggtagg cgtccagggg gccttcgagc
     6121 tggtggcaga ggtggtggag cgccgattcg aaggcgggtt cgaagccctt gggcggttcg
     6181 ggatccaggc ccgcggccgt gaggaaggcc ctggccgggg gcagggtttc agaactgccg
     6241 ggcacccagc gccgctggcc cgtcccgccc ggcgcgggcc catccagggc cacggcccgg
     6301 tcccggtgga tgcccagcca gagggaaacc cgcccgcagg gcccggagcc ctcgaaatcc
     6361 aggggcagct gggcgtcgtc atggaatacc acggcgcgga ggggcagcca ttcgaaggtc
     6421 tcggccacct tggcgcccac ggggctgagg ccgtcgcggc gcaggccgga gacggcctcg
     6481 gcgaagacct gccgcaggcc tgccaggctc aggacgcctt cgggaaggcc ctgggcatcc
     6541 aggtccaggg gcggctcgtg ccagtccgcc gccagcaccg gcagcacctg ctggaagagg
     6601 atcagggccg gatcccagtc ccagtggtgg gccggttcgt agcccagctc ccggcagagg
     6661 tcgaaccagg cccggtccgg cgccggggcc ccgggcagaa agatcgaacg gccatcgagg
     6721 aagatctcgc aacccggctg ggccgcaggg gtctgccgcc ggctcagtcc cagttcatgg
     6781 cgcccgaggg tggccagggt ggtctcgcgg tacgggtgat cctcccgccg cagcaccttc
     6841 agcggcgcgc cgagaatcca cgcatccatg gacatgggtc ctcccaggta ggccaacctg
     6901 gggcggatgc gggatgccgt caatccccga atgggatttg atggtgaaat atcaatcggt
     6961 tctgcgcaga tcggtgccgg ggtagtagtg ggcaagaatc tgctggaagg tcgccccctc
     7021 gagggccatg ccgtaggccc cggtctggca catgcccacg ccgtggcccc agccccggcc
     7081 gtagaacacc cagcgccgct ggtcgccgcg gcccagggtg atccagcgga agacgttgtc
     7141 cttgaggccc agcaggcccc ggatgtgcat gccccggacc cggtgcggcg cgccctggct
     7201 gtccaccagg gtgaggtcca gcacgcggcc ctcctcgttg tactgggccc tgagctcgcg
     7261 gatgccagcc accttgatgc gcctgcgcac cagggccagc agatcggcct ccgcgtattc
     7321 cacccgccag tgggcggtgg gattgtaccg gtcccaggcg gcgccatcgg gatccagccg
     7381 gcgcaccagc accgcggcgg agccgtcctc ggcggggatc cacctcagcc ggtcgcccac
     7441 ctggatgggg gccttgggca gcaggcggag gctgccgtcc ggggcctctt ctgccagcag
     7501 caagttagga gaaaggggca gcggctcggg accaccccgc ttccggcgca cctgccggtc
     7561 catcagcagg ctgccttcgc ccgggacgag ggggtcgagg tcgttccaca ggcgtcccag
     7621 ggccgcgagg gcctggcgga gtgtgagcgg ttcccgggcg gcccagaggg ccggggggac
     7681 gatgccccgc cgggtgagga aggcggccag caggcggtcg cccgcgggca cacccggagg
     7741 caggaagtag gcggcgtcct ggggcctctc ctggccctcc accactcgat ggaaacccag
     7801 ggcgcgggcc agggccaggg tcagtccgcc atcccgggcc agcggcgcgg gttcgatgcc
     7861 gaggcgctcc tggagcgcac gaagggggat ggagaggtcc tcggccgtgg cgggccgggc
     7921 cagccgctca ccgctgagcc actccaccgg gacgatacca gcggcgagcc gcagcaggtc
     7981 ccaggtgagc cagggctgct gggcctcggc ggtgacaggg acacccgaag cgaagggcag
     8041 cgtgagcggg ttggccggat agcagggcgc ggctttcaga tacggggcgt caccgccgaa
     8101 gacgtgcgcc acatccaccg tatgaccgcc gcagttcgcc atgaacaggg ccaggatggg
     8161 ctttccaccg taggtggcga agaggccttc cgtctcctgg atggcccggt ctgtgagggc
     8221 ctgctccccg tcgcggccgc cgtagacctg gtcggccacg gtgtcgccca tgtcgaagcc
     8281 gtccgccgcg cgcttgccgc ggttggccac cgcataggtg cgggccgcca cggcctgggc
     8341 cttgagggcc tcgaggctgg ggaactccca ggcgcccatc tccttgggca ccacgccgcg
     8401 caggtaggtt tccagatcca gcgtgttcac caccgtcagg cggccctggg cattggggaa
     8461 gatctcgacc ttgccgcggt agcggccctt gccctggagg gaggtcagct cgcccgtggg
     8521 cttcagccac aggccgtcct ggggcagggc ccggcgttca tagcggtccg tgatggcata
     8581 gagggcccgg cccttgcggg gcgcagcccc gcgcgattca gaggccaccc acagttcgtc
     8641 gaaacccagg tcctggagct tctggagcac cggctccgcc tcctgggccg cggcgaagtg
     8701 gcccgtcagc acacgccagg tctcggcatc cgggaccttc acccggtccg gcgcctcgcc
     8761 cagcgccttc aggcgcttca tgagggcggc ggcttcggcg gccgtgtggg gccggcccac
     8821 ctggacgcgg tactcgctgg tgggatcgga cacgccgcgg ctgtcccacc agatgcgcag
     8881 cttctcgtcc ggcgccagct tcagcagcgg cctgcccgcg cggtcgcaga cctggccgcc
     8941 accctccagt gacacgatcc attccgtggc ctgggtgtcg aggccgatcc tcagcggggg
     9001 ctgggcggcg tgggcggaag cgagcgacag gaccagggcg ggaaggagga agggcttcat
     9061 ccggcccatt gtcccacgaa tcgcgccagg gcctgccagc ggcgggcgcg gagcgcctcc
     9121 gcgtccagca gttcacccgc gggcccacgc cgatggatca gcagggccag gc
//
LOCUS       DASUDT010000456         2074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1214052, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000456 DASUDT010000000
VERSION     DASUDT010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214052"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFV26_09415"
     CDS             <1..235
                     /locus_tag="VFV26_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846424.1"
                     /translation="KASDAGKVQIGSMRSDGTHAVSGWMETRPRIVMKAPKPGSVLLI
                     QAEDPGTGWKGETRLLLDAPWKTFAFRMEKPKP"
     gene            complement(298..498)
                     /locus_tag="VFV26_09420"
     CDS             complement(298..498)
                     /locus_tag="VFV26_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846425.1"
                     /translation="MHMDTSVRQHNPAFWTTAERLHEVFNQLERQMSASPRGLAVLRQ
                     VQALEAELEAEVMHRSRRVHAA"
     gene            complement(665..1180)
                     /gene="ruvC"
                     /locus_tag="VFV26_09425"
     CDS             complement(665..1180)
                     /gene="ruvC"
                     /locus_tag="VFV26_09425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX4846426.1"
                     /translation="MIVAPSPVRCLGVDPGSLACGWAVVERFGSRMSLVEAGVIRNPR
                     GADFDQRALRIHERLAEAIAAHQPGFMAVESPFVEKNAATALKLGQIRGGILLTAALH
                     GLPVGDYNPMQVKKAVSGYGWADKHQVGKMVMTLLNLKEELPSDAADAAAVAIGHLLA
                     SRGLSKAPGRA"
     gene            complement(1177..>2074)
                     /locus_tag="VFV26_09430"
     CDS             complement(1177..>2074)
                     /locus_tag="VFV26_09430"
                     /inference="COORDINATES: protein motif:HMM:NF012975.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEX4846427.1"
                     /translation="RTFGLLKPKETPTPEHLNAMLDKTRGGPLEAMINTLLLRSLKRA
                     EYSAENIGHSGLALQDYLHFTSPIRRYPDLIVHRLLRKVLRGERLPEALQSHLAVLAK
                     GASDAEQKATEAERENDKWKACLLMKSRIGQRFRGRIQGFSARVAFITLDAPFVEVGV
                     PLAALGGNFWIDEHRTKATGLRGTVVLTIGDAVEVEITAADEELRRVSGWLTEAKAQD
                     GQGKAFQFVPTLAAPATLREGDLEKPRKGRSQAQEQRGRRDPAPKGRPPKKAREAGGK
                     SREAHPKPPKGSVRGTGKRKGR"
BASE COUNT          301 a          672 c          747 g          354 t
ORIGIN      
        1 caaggccagc gatgcgggga aggtccagat cggttcgatg cggtcggatg ggacccatgc
       61 ggtgagtggg tggatggaga cccggcccag gatcgtgatg aaggccccga aaccgggttc
      121 cgtgttgctg atccaggccg aggatcccgg cacgggctgg aagggcgaaa cgcggctgct
      181 gctggacgcc ccctggaaga ccttcgcctt ccggatggag aagccgaagc cctgagtccg
      241 ggacggtacg cagaaaggcc cggcaacgcc gggcctttct gcgtacggag aatcggatca
      301 ggcggcgtgg acgcgccggc tgcggtgcat gacctcggct tcgagctcgg cctccagggc
      361 ctgcacctgg cggaggacgg cgagaccgcg cggggaggcg ctcatctggc gctccagctg
      421 gttgaagacc tcatggagcc gctcggcggt ggtccagaag gccgggttgt gctgtcgaac
      481 gctggtgtcc atgtgcatgg cagctccaga tgtttcctgg acatcatcat cgtctttgcc
      541 gatgaccaat gctagtgatg gacatcacaa gaaatgtcac gagttacgcg tgattttgtc
      601 atgggatgcg tgacaatccg acgaggcccc gaaaaacatg acattcaggt cgtgatccat
      661 ggggtcaggc ccgccccggg gccttcgaca gcccccggct ggccaggagg tggccgatgg
      721 ccacggcggc ggcgtcggcc gcatccgagg gcagttcctc cttcaggttc agcagggtca
      781 tcaccatctt ccccacctgg tgcttgtcgg cccagccgta gccgctgacg gccttcttca
      841 cctgcatggg gttgtagtcg cccacgggca gcccgtggag ggccgccgtg agcaggatgc
      901 cgccccggat ctgccccagc ttcagggcgg tggcggcgtt cttctccacg aagggggatt
      961 ccacggccat gaagccgggc tggtgggcgg cgatggcctc ggccaggcgc tcatggatgc
     1021 gcagggcccg ctggtcgaag tcggccccgc ggggattgcg gatgaccccg gcctccacca
     1081 gggacatgcg ggagccgaag cgctccacca cggcccagcc gcaggccagg gagcccgggt
     1141 ccacgcccag gcagcgcacg ggcgagggcg cgacgatcat cggcccttcc gcttcccggt
     1201 accccggacg ctgcctttgg ggggcttagg atgggcttcc cgggacttcc cgcccgcttc
     1261 gcgggccttt ttgggtgggc gccccttcgg cgccgggtcc cggcgtcccc gctgctcctg
     1321 cgcctgggat cgtcccttcc ggggtttctc cagatcccct tctcgcagcg tcgcaggcgc
     1381 tgcgagcgtc ggcacgaact ggaaggcctt cccctgccca tcctgggcct tcgcctccgt
     1441 gagccagccg ctgacgcggc gcagctcctc gtccgcggcg gtgatctcca cctccacggc
     1501 atcgccgatg gtgagcacca cggtgccgcg gagaccggtg gccttggtgc ggtgttcgtc
     1561 gatccagaag ttgccgccca gggccgccag cgggacgccc acctccacga agggggcatc
     1621 gagggtgatg aacgctaccc gggcggaaaa accctggatg cggccccgga agcgctggcc
     1681 gatgcgggac ttcatcagca ggcaggcctt ccacttgtcg ttctcgcgct cggcttccgt
     1741 ggccttctgc tcggcgtcgc tggcgccctt ggccagcacg gccaggtggc tctggagggc
     1801 ctcgggcagg cgctcgccgc gcaggacctt gcgcagcagg cgatggacga tcaggtcggg
     1861 gtagcggcgg atggggctgg tgaagtgcag gtagtcctgg agcgccaggc ccgaatggcc
     1921 gatgttctcg gcgctgtact cagcccgctt gaggctgcgc agcagcaggg tgttgatcat
     1981 ggcctccagg gggccgcccc gggtcttgtc gagcatggcg ttgaggtgct cgggcgtggg
     2041 cgtctccttg ggcttgagca ggccgaaggt gcgg
//
LOCUS       DASUDT010000457         8296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1435212, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000457 DASUDT010000000
VERSION     DASUDT010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 8296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8296
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435212"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2739)
                     /locus_tag="VFV26_09435"
     CDS             complement(<1..2739)
                     /locus_tag="VFV26_09435"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX4846428.1"
                     /translation="MLRFRVSALAFVAFALVAQDRAPRFVSSPDVHGDRVVFTWEDDL
                     WLGSLKGGPARRMTTHPGLETSARFSPDGRWIAFNAQYDGATEAYLMPVEGGVPKRLT
                     WAGFVSVQGWAPDSAKVLFKTISDHDFRPIERLFTVDLAGHEPEAVAVPRGVQGSLGP
                     DGRLAYSTKGVVEYYWKRYKGGRHQDLWLADLKTGGFTKLTDYVGRNGAPIWAGGKVL
                     FESDRGANGITNLYAVDPATRAVEQLTDLKDFDVQQPSTDGRTVVFVQGGHLQALDLA
                     TRAVRPVPVTTASDGWKAAPRPVNPREWIQAMSLMGGTAVLEARGEVFLLPTDAAKPA
                     KNLTQTPGTRERFPRLSPDGKRVAYFSDASGDYDLYLQPAEGGAAERIPTGLKTALYH
                     LEWSPDGTKLLFGDKSFALYVMDVAAKKLTKVDESRELKNDQFTWEVSDYAWAPDSQW
                     IAYSFVEPSRNGRIHLFNLATKQKVALTDGFYDCVNPRFDLDGSTLYFLSYSNFHTKL
                     DPGQDNHIQSEPVQVMAVKLKAGEDKVSPGSSSAPAFRIDVAGLADRVAPLPVKAGNL
                     FHLKAGRGIVGWDEVEGWDDNVVEELYSPRGAAKWKLHLYDAAAKKDKEVVLNDLVSD
                     WTFDAEGRRLLIRKGADFHAGEAAAAFTSKALPEKLDLERLTMTADPRAEWKQIFEDT
                     WRWYRDFFWSPTMNGNDWEAIGAKFRAWLPDLNSRQELNWLLSQMVGELNVSHTYVSG
                     GDFGPARPAPSPVRTGLLGADFRAENGFYRFATVYGPTAIARDLKAPLADPAPRVKEG
                     EYLLAIDGKPLRAPEAIASRLQVIKGQKVTLTVNAKPTMEGARTFEVEPVASDWNLRY
                     ERWVADNIAAVDKASNGQLGYMHITAMGDQNIGQFDKYWRAFRYKKGIVIDVRGNGG"
     gene            complement(2875..3573)
                     /locus_tag="VFV26_09440"
     CDS             complement(2875..3573)
                     /locus_tag="VFV26_09440"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005034193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEX4846429.1"
                     /translation="MLLLPEDLVAPDRAVLTGRRLAHVREVHRAGLGDDLTVGLLDGA
                     MGRGRVLRLDEEALELALSLDQAPPPKLPLTLVIAVPRPKVLNRVVAAAASLGAARLV
                     LLNAWKVEKAYWASPKMKPESLREQLILGLEQAKDTVLPELRLARLFRPFVEDELPGL
                     LAGGTGLLAHPGAGGAGPEVLAAPVTLAIGPEGGWIDAEVQSLLKAGLQPLDLGPRIL
                     RTETALAALVGKLF"
     gene            complement(3579..4100)
                     /locus_tag="VFV26_09445"
     CDS             complement(3579..4100)
                     /locus_tag="VFV26_09445"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4846430.1"
                     /translation="MAALAIRPATLEDAALLADLGARTFRETFEAISSAQDMDAFLAQ
                     AYGEAIQRAELADPSRPARVLEIEGVPSGFLQLRLGHREPGVPGERPVELQRIYLLRA
                     AQGSGGGAALMAEAVDLAVAWGADILWLGVWENNHRALAFYARSGFREVGEHIFKIGE
                     QVDRDLILARDLP"
     gene            complement(4106..4450)
                     /locus_tag="VFV26_09450"
     CDS             complement(4106..4450)
                     /locus_tag="VFV26_09450"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEX4846431.1"
                     /translation="MAVSVSFRTYLLEQMGQIRPVTTRPMFGGLTFFAEGRAFALADD
                     GVVYFKVDDSNRGDFEAAGTGPFLPFGDPARPMQYYEVPADVLEDPEQLGAWMAKAIA
                     VAARVKPKARRK"
     gene            4513..5415
                     /locus_tag="VFV26_09455"
     CDS             4513..5415
                     /locus_tag="VFV26_09455"
                     /inference="COORDINATES: protein motif:HMM:NF006045.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional enoyl-CoA hydratase/phosphate
                     acetyltransferase"
                     /protein_id="HEX4846432.1"
                     /translation="MRINTLDALLHAVKDRPRKRLAVAWANDDHTLEAVNAAVEAGLV
                     EAILVGDEAIMRQVCADHALPVERFRLVHAATDTEAAAKAVALVRSGEADLLMKGLLS
                     TDKYMKAILSKEQGLLDPGAILSHVTVMEHPGHSKLLIAGDVAVIPEPEIKEKLAILG
                     YLVKTARALGIEVPKVAVLAASEQVQPKLRSSVEAAMLSKMADRGQIKGALVDGPMAL
                     DGAVDPESARIKGMGGPVAGDADCLLFPNLEAGNTFYKTGTKLGGAEIAAVVAGARVP
                     CVLSSRGDSAKTKLSSIALAALLA"
     gene            complement(5533..7743)
                     /gene="buk"
                     /locus_tag="VFV26_09460"
     CDS             complement(5533..7743)
                     /gene="buk"
                     /locus_tag="VFV26_09460"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002834.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047761 - butyrate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HEX4846433.1"
                     /translation="MFDIEASLDSRLLAEPRNRPTVMFPEALDPRTLEAACFLGRFIR
                     PVFLAPEAEVRALAAQRLGHLGADRVAYTLSESAFVTPESRPDMVEAFAAACVAFGET
                     HGRPLGLAEARALVSEPGRFGIWAVKLGHADMVVGGAIHEPKAFFRPMVDILAQRSVA
                     CEAGIFVLPDSHPDDVYPHNIVVFGDVGVNASMSPRTLAEVAVGTCAVARDLIPEDVL
                     PEIRCAMVSYSNRGSDEGPSPQLVRQAAELVPEILAERVAHSPRYASIHIRGEIKVSV
                     ALSRRSADLYHADGLPWEGGPNVIVCPNLDMGNLLYHLYATRFPEAKKFPVMFGLWFQ
                     GVDLPMDCTPEDIRLAVKASVMRLHAYGEWKRTPKDTFFRRHRVLVLNPGSTSTKTSI
                     FEGDEERFTEEIQHPAEAMKPFEGKPITGQFAFRKEAVLRFLADKGLGLGDLDAVAGR
                     GGLLRPIPHGTWKVGPAMLEDLKAGQRGEHASNLGALIAAELVAGTATPAYIVDPVVV
                     DEADPKVKISGLKELPRRVISHALNQIATARRYAEEHETFYERINVIVAHMGGGITVG
                     AHRKGRYIDVNNGLDGEGPFSPQRTGTLPAGQLIELCFSGKYTKAELKLLNKGRGGIM
                     DLLGTTDMREVERRVEAGDAEAALVYEAMIYQIAKAITALVPAFDGAPMDAILLTGGM
                     ARSPKLVAELRRLTAALGCPVEVYPGENEMAALAKGALRVLSGRETAKDYPPQG"
     gene            complement(7831..>8296)
                     /locus_tag="VFV26_09465"
     CDS             complement(7831..>8296)
                     /locus_tag="VFV26_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846434.1"
                     /translation="AKPWVFRNHTLTPLAVFEIQARVLGAERYRFDRAAELSPVDLAL
                     GWGPMSDSRVLDAFRIDQRDRWYFWRATQMPIQEGEVIRHSANMHMIPASEAIGRRLK
                     AARVGQVVRLKGKLVRADGRDGWHWASSLTRADTGDGSCEVIWVESVQVTDR"
BASE COUNT         1214 a         2849 c         2956 g         1277 t
ORIGIN      
        1 gccgccgttg ccgcgcacat cgatgacgat gcccttcttg tagcggaagg cgcgccagta
       61 cttgtcgaac tggccgatgt tctggtcgcc catggccgtg atgtgcatgt agcccagctg
      121 gccgttggag gccttgtcca cggcggcgat gttgtcggcc acccagcgct cgtagcgcag
      181 gttccagtcg ctggccacgg gctccacctc gaaggtgcgg gcgccttcca tggtgggctt
      241 cgcgttcacg gtgagcgtca ccttctggcc cttgatgacc tggagccgcg aggcaatggc
      301 ctcgggggcc ctcaggggct tgccgtcgat ggccaggagg tactcgccct ccttcacccg
      361 gggcgcgggg tccgccaggg gggccttgag gtcgcgggcg atggccgtgg gtccgtacac
      421 cgtggcgaaa cggtagaagc cgttctcggc gcggaagtcc gcccccagca ggccggtgcg
      481 cacggggctc ggcgcgggcc gggccgggcc gaagtcgccg ccgctcacgt aggtgtggct
      541 cacgttcagc tcgcccacca tctggctcag cagccagttc agctcctggc gggagttcag
      601 gtccggcagc caggcgcgga acttggcgcc gatggcctcc cagtcgttgc cgttcatggt
      661 gggggaccag aagaagtccc ggtaccagcg ccaggtgtcc tcgaagatct gcttccactc
      721 ggcccgggga tccgcggtca tggtgaggcg ctccaggtcc agcttctcgg gcagggcctt
      781 ggacgtgaac gcggccgcgg cctcgcccgc atggaagtcc gcgcccttgc ggatgagcag
      841 gcgccggcct tcggcatcga aggtccagtc gctgaccagg tcgttcagca ccacctcctt
      901 gtccttcttg gcggcggcgt catagaggtg cagcttccac ttggcggcgc cgcgggggct
      961 gtagagctcc tccaccacgt tgtcgtccca gccctccacc tcgtcccagc ccacgattcc
     1021 gcggccggcc ttcaggtgga acaggttgcc cgccttcacg ggcaggggcg cgacgcggtc
     1081 cgccaggccc gccacatcga tgcggaaggc aggcgcggag gaggaccccg gagagacctt
     1141 gtcctcgccc gccttcagct tcacggccat gacctgcacg ggttcggact ggatgtggtt
     1201 gtcctggccg ggatcgagct tcgtgtggaa gttgctgtag ctgaggaagt agagggtgct
     1261 gccatcgagg tcgaagcggg ggttgacgca gtcgtagaag ccgtccgtga gcgccacctt
     1321 ctgcttcgtg gccaggttga agaggtggat gcggccgttg cggctgggct ccacgaagct
     1381 gtaggcgatc cactgggaat cgggggccca ggcgtagtcg ctgacctccc aggtgaactg
     1441 gtcgttcttg agctcgcggg actcgtccac cttggtgagc ttcttcgcgg ccacgtccat
     1501 gacgtagagc gcgaagctct tgtcgccgaa gagcagcttc gtgccgtccg ggctccactc
     1561 caggtggtag agggcggtct tcaggcccgt ggggatgcgc tccgccgcgc cgccctccgc
     1621 gggctgcagg tagaggtcgt agtcgccgct ggcatcgctg aagtaggcca cgcgcttgcc
     1681 gtccggcgac aggcgcggga agcgctcgcg ggtgcccggc gtctgcgtga ggttcttcgc
     1741 gggcttcgcc gcgtccgtgg gcaggaggaa cacctcgccc cgggcctcca ggaccgcggt
     1801 gccgcccatc aggctcatgg cctggatcca ctccctggga ttcacgggcc gcggcgcggc
     1861 cttccagcca tcgctggcgg tggtgacggg cacggggcgc acggcccggg tggccaggtc
     1921 cagggcctgc aggtggccgc cctgcacgaa gaccacggtg cggccgtcgg tgctgggctg
     1981 ctgcacgtcg aagtccttga ggtccgtgag ctgctccacg gccctggtgg cggggtccac
     2041 cgcgtacaag ttcgtgatgc cgttggcgcc gcggtcggat tcgaagagca ccttgccgcc
     2101 cgcccagatg ggcgcgccgt tgcggcccac gtagtccgtg agcttggtga agccgccagt
     2161 cttcagatct gccagccaga ggtcctggtg gcggccgccc ttgtagcgct tccagtagta
     2221 ctccaccacg cccttggtgc tgtaggccag gcgcccgtcc ggccccaggc tgccctgcac
     2281 gccccggggc accgccacgg cctcgggctc gtgccccgcg aggtccacgg tgaagagccg
     2341 ctcgatgggc cggaaatcat ggtcggagat ggtcttgaac aggaccttgg cgctgtccgg
     2401 cgcccagccc tgcacggaga cgaaaccggc ccaggtgagg cgcttcggca cgccgccctc
     2461 cacgggcatc aggtaggcct ccgtggcgcc gtcgtactgg gcgttgaagg cgatccaccg
     2521 gccgtcgggg ctgaagcgcg ccgaggtctc caggcccgga tgggtggtca tccgccgggc
     2581 cggaccgccc ttcagggagc ccagccacag gtcgtcctcc caggtgaaca ccacgcggtc
     2641 gccatgcaca tccggcgagc tgacgaagcg gggggcgcgg tcctgggcca cgagggcgaa
     2701 ggccacgaag gcgagggcgg aaacgcggaa gcgcagcatc aaagactccg gcaacgggtg
     2761 aaccatcgta cctggtttat cgatgaatgg ctggaaccgc gaaacacgcg aatgaacgcg
     2821 aaagaaagtg gatgcaggct ttcctttcgc ggcttttcga gtctttcgcg gttcctagaa
     2881 gagcttcccc accagggccg ccagggcggt ctcggtgcgg aggatgcggg ggcccaggtc
     2941 cagtggctgc aggcccgcct tcaggaggct ctgcacctcg gcatcgatcc agccgccctc
     3001 gggaccgatg gccagggtga caggggccgc cagcacctcc ggcccggccc cgccagcgcc
     3061 gggatgggcc aggaggcccg tgccgcccgc caacaggccc ggcagctcgt cctccacgaa
     3121 gggccggaag agccgggcca gccgcagctc cggcagcacc gtgtccttgg cctgttcgag
     3181 cccgaggatg agctgctcgc gcaggctctc gggcttcatc ttcgggctgg cccagtaggc
     3241 cttctccacc ttccaggcgt tcagcagcac gaggcgcgcc gcgcccaggc tggcggcggc
     3301 ggccaccacg cggttgagca ccttgggccg gggcacggcg atcaccaggg tcaggggcag
     3361 cttgggcggc ggcgcctggt ccaggctcag cgccagttcc agcgcctctt cgtccaggcg
     3421 cagcacccgg cccctcccca tggccccgtc cagcaggccc acggtcaggt cgtcgcccag
     3481 accggcccgg tgcacctcgc gcacgtgggc cagccggcgc cccgtgagga cggcgcgatc
     3541 cggggccacc aggtcctccg gcagcagcag caccaggttc aaggcaggtc cctcgccagg
     3601 atcaggtcgc ggtcgacctg ctcgccgatc ttgaagatgt gctcgcccac ttcgcggaac
     3661 ccgctgcggg cgtagaaggc cagggccctg tggttgttct cccacacccc cagccacagg
     3721 atgtccgcgc cccaggccac ggccaggtcc acggcttccg ccatgagggc cgcgcccccc
     3781 ccgctgccct gggccgcgcg cagcaggtag atgcgctgca actcgaccgg gcgctcgccg
     3841 gggacgccgg gctcccggtg gcccaggcgc agctggagga agcccgaagg caccccctcg
     3901 atttccagga cccgggcggg ccgggagggg tccgccagct cggcccgctg gatggcctcg
     3961 ccgtaggcct gcgccaggaa ggcgtccatg tcctgggcag agctgatggc ctcgaaggtc
     4021 tcgcggaagg tgcgggcgcc caggtccgcg aggagcgcgg cgtcctccag tgtggcgggg
     4081 cggatggcga gggcagccat gtcccctact tccgccgggc cttcggcttg acgcgggccg
     4141 ccacggcgat ggccttggcc atccaggcgc ccagctgctc cgggtcctcc aggacatcgg
     4201 cgggcacttc gtagtactgc atgggccggg ccggatcgcc gaagggcagg aagggccccg
     4261 tgcccgcggc ctcgaaatcc ccgcggttgc tgtcgtccac cttgaagtag accaccccgt
     4321 cgtcggccag ggcgaaggcc cggccctcgg cgaagaaggt cagaccgcca aacatggggc
     4381 gggtggtgac cgggcggatc tgccccatct gttccaggag gtatgtgcgg aagctcacgg
     4441 aaacggccat ggggacatgc taccttccct gcggaccagc cggaggcccg gcgtcatttg
     4501 tcaggatctt ccatgcggat caacaccctc gatgccctgc tccacgccgt gaaggaccgt
     4561 ccccgcaagc ggctggcggt ggcctgggcc aatgacgatc acaccctcga agcggtgaat
     4621 gccgcggtgg aggccggtct ggtggaggcc atcctcgtgg gcgacgaggc gatcatgcgc
     4681 caggtctgcg cggaccacgc cctgcccgtc gagcgcttcc gcctggtcca tgcggccacg
     4741 gacacggaag ccgccgccaa ggccgtggcc ctggtgcgct ccggcgaggc ggacctgctc
     4801 atgaagggcc tgctcagcac ggacaagtac atgaaggcca tcctgagcaa ggagcagggg
     4861 ctgctggatc ccggcgccat cctcagccac gtgacggtca tggagcatcc cggccattcc
     4921 aagctgctca tcgcgggcga cgtggccgtg atccccgagc ccgagatcaa ggagaagctg
     4981 gccatcctgg gctacctggt gaagaccgcc cgggccctgg gcatcgaggt gcccaaggtg
     5041 gccgtgctgg cggcctcgga acaggtgcag cccaagctcc gttcgagcgt ggaggcggcg
     5101 atgctgtcca agatggccga ccgcggccag atcaagggcg ccctggtgga cggccccatg
     5161 gccctggacg gcgccgtgga tcccgaatcc gcccgcatca agggcatggg cggtcccgtg
     5221 gccggcgacg ccgactgcct gctcttcccc aacctggagg cgggcaacac cttctacaag
     5281 accggcacca agctgggcgg cgccgagatc gccgccgtgg tggccggcgc ccgggtcccc
     5341 tgcgtcctca gcagccgcgg cgacagcgcc aagaccaagc tcagctccat cgccctggcg
     5401 gcgctgctgg cctgagccca cacgatctcc gggctaccgg cctggaaaag catcctgtaa
     5461 gcggaggagc cggaggatca gaggagagcg gagaatacag cctccgctct ctgattttcc
     5521 cgtgaaccgg cctcagccct ggggcggata gtccttggcg gtctcgcgtc cggagagcac
     5581 gcgcagggcg cccttggcga gggcggccat ctcgttctcg ccggggtaga cctccacggg
     5641 gcagcccagg gcggcggtga ggcgccgcag ctccgccacc agcttcggcg accgcgccat
     5701 gccgcccgtg agcaggatgg cgtccatggg cgcgccgtcg aaggcgggga ccagggccgt
     5761 gatggccttg gcgatctggt agatcatggc ctcgtagacc agcgccgcct cggcgtctcc
     5821 ggcctccacg cgccgttcca cctcccgcat gtcggtggtg cccagcaggt ccatgatgcc
     5881 gccgcggccc ttgttcagga gcttcagctc ggccttggtg tacttgccgg agaagcagag
     5941 ctcgatgagc tggcccgcgg ggagagtgcc cgtgcgctgg ggcgagaagg gcccttcgcc
     6001 gtccaggccg ttgttcacgt cgatgtagcg gcccttgcgg tgggcgccga cagtgatgcc
     6061 gccgcccatg tgggccacga tgacattgat gcgctcgtag aaagtctcgt gctcctccgc
     6121 gtagcggcgg gccgtggcga tctggttcag cgcgtggctg atgacgcgcc ggggcagctc
     6181 cttcaggccc gagatcttca ccttgggatc agcctcgtcc accaccaccg ggtccacgat
     6241 gtaggccggg gtggccgtgc ccgccaccag ctcggcggcg atgagggcgc ccaggttgga
     6301 ggcgtgctcg ccgcgctggc cggccttcag atcctccagc atggccggcc ccaccttcca
     6361 ggtgccgtgg gggatgggcc gcagcaggcc gccgcgtccc gccacggcat cgagatcgcc
     6421 gaggcccagg cccttgtccg ccaggaagcg cagcacggcc tccttgcgga aggcgaactg
     6481 ccccgtgatg ggcttgccct cgaagggctt catggcctcg gcgggatgct ggatctcttc
     6541 ggtgaaccgc tcctcgtcgc cttcgaagat ggacgttttg gtggacgtgg agcccgggtt
     6601 cagcaccagc acgcggtgcc gccggaagaa ggtgtccttg ggcgtgcgct tccattcgcc
     6661 gtaggcgtgg aggcgcatga cggaggcctt cacggccagg cggatgtcct cgggggtgca
     6721 gtccatgggc aggtccacgc cctggaacca gaggccgaac atgacgggga acttcttcgc
     6781 ctcggggaac cgcgtggcgt agaggtggta gagcaggttg cccatgtcca ggttggggca
     6841 cacgatcacg ttggggccgc cctcccaggg caggccatcc gcgtggtaga ggtccgccga
     6901 gcggcgcgac agcgccacgc tgaccttgat ctccccccgg atgtggatgc tggcgtagcg
     6961 cgggctgtgg gccacgcgct ccgcgaggat ctccggcacc agctcggcgg cctgccgcac
     7021 cagctgcggc gaagggcctt cgtcgctgcc gcggttcgag taggacacca tggcgcagcg
     7081 gatctccggc agcacgtctt cggggatgag gtcgcgggcc acggcgcagg tgcccacggc
     7141 cacctccgcc agcgtgcggg ggctcatgct cgcgttcacg cccacgtcgc cgaagaccac
     7201 gatgttgtgg ggatagacat cgtccggatg cgaatccggc agcacgaaga tgcccgcctc
     7261 gcaggcgacg ctgcgctggg ccaggatgtc gaccatgggc cggaagaagg ccttgggctc
     7321 gtggatggcg ccgcccacca ccatgtccgc gtggccgagc ttcacggccc agatgccgaa
     7381 gcgcccgggc tcggacacca gggcccgggc ctcggcgagg cccaggggcc gcccgtgggt
     7441 ctcgccgaac gccacgcagg cggcggcgaa ggcctccacc atgtccggcc gggactcggg
     7501 ggtgacgaag gcgctctccg acagcgtgta ggccacgcgg tcggcgccga ggtggcccag
     7561 ccgctgggcg gccagggcgc gcacctcggc ctcgggggcc aggaacacgg ggcggatgaa
     7621 gcggccaagg aagcaggcgg cttcgagggt gcgggggtcc agggcttccg ggaacatcac
     7681 cgtgggacgg ttccggggct cggccagcag acggctgtcg agggacgctt cgatgtcaaa
     7741 catggggctc cagggccgtg gaaggccttc cagcgccgag tctatcaggg ggtggagccg
     7801 gagttttcca cccgccggtc acatttcgga tcagcggtct gtcacctgga ccgattccac
     7861 ccagatcacc tcgcaggatc cgtctccggt atccgcccgc gtcaggctgc tggcccagtg
     7921 ccagccgtcc cggccgtccg cccgcaccag cttccccttc aggcgcacca cctggcccac
     7981 ccgggcggcc ttcaggcgcc ggccgatggc ctcgctggcc ggaatcatgt gcatgttggc
     8041 gctgtgccgg atgacctcgc cttcctgaat gggcatctgg gtcgcccgcc agaaatacca
     8101 gcggtcccgc tgatcgatcc ggaaggcgtc gaggacccgc gagtcggaca tggggcccca
     8161 gcccagagcc aggtccacgg gcgagagctc cgccgctcgg tcgaagcggt agcgttccgc
     8221 acccagcacc cgcgcctgga tctcgaagac cgccaggggc gtgagggtgt ggttgcggaa
     8281 cacccagggc ttggcg
//
LOCUS       DASUDT010000458         2485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1191833, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000458 DASUDT010000000
VERSION     DASUDT010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1191833"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1166)
                     /locus_tag="VFV26_09470"
     CDS             complement(<1..1166)
                     /locus_tag="VFV26_09470"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX4846435.1"
                     /translation="MQEIHRGRLHPGDPLPGYRTLGERLGVSRNTVMAAYRELQAEGW
                     VVSTPGEGSVVAPDPPTRMHGQAGPSEAVRGGTAMGFDLASGRLEEAPKGAPGLLKVA
                     SGLPDPRLLPGAELARAYRRALVLNRQQNLELEDPQGHPMLRQSLARMLGESRGIAAS
                     PENILVTRGSQMALFLAGQALISPGEAVAVEALGHPGAWEAFARAGARCLPVPVDAEG
                     MRVGALAQLAESERLRAVFVTPLRQYPTLVPLSGERRARLMALAQAHRFAVIENDQDS
                     EFLFEGRPRAPLAAEDPWGVVVHVGTLSKIFSPNLRLGFVHGPAPLVARMRALRQALD
                     RQGDMVLERAFAELLDDGAIHRHLNRMQQTYRIRRDVLCRALGRALGDRLSFQVP"
     gene            1428..>2485
                     /locus_tag="VFV26_09475"
     CDS             1428..>2485
                     /locus_tag="VFV26_09475"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX4846436.1"
                     /translation="MSDIHAPSPSPARRRNRPLLALGAGLAAVLLMACGGGGGSSAPS
                     SPPPAATATLTSITLAPSGPALNVGASADIQATGHFSDGTTITPYDSEVTWTSSAPGT
                     ASVSASGLVSGVAAGTATITAAKGAIQGSATVTVNASAAILTSITLNPAAGVTLNVGQ
                     TADFTATAHWSNGTTTTPYDSTVTWTTNLPNVATVNSAGVVTAVAAGAAILTATANGL
                     NTTAAITVSASSPTLTAITLTPASSTLSVGQTVDITSAAIWSNGTGTTPYDSYLTWTS
                     SAPSVATVNAGGVVTAIAAGTATITASLGGVSRTAAITVSAGPAAALTGLSMLQSTSS
                     LQVGQSTGIVVMARWSDGT"
BASE COUNT          371 a          958 c          809 g          347 t
ORIGIN      
        1 ggcacctgga agctcaggcg atcgcccagg gcccgcccca gcgcccggca cagcacatcg
       61 cgccggatcc ggtaggtctg ctgcatgcgg ttcaggtggc gatggatggc cccatcgtcc
      121 agcagttcgg cgaaggcccg ctccagcacc atgtccccct ggcggtccag ggcctgccgc
      181 agggcgcgca tgcgggccac caggggcgcc gggccatgca cgaagcccag ccgcaggttg
      241 gggctgaaga tcttgctgag ggtgcccacg tggacgacca ctccccaggg gtcctcggcg
      301 gccaggggcg cccgggggcg gccttcgaag aggaattcgc tgtcctggtc gttctcgatg
      361 accgcaaagc gatgagcctg ggccagggcc atcaggcgcg cgcgccgctc gcccgacagg
      421 ggcaccaggg tggggtactg gcgcaggggc gtgacgaaga ccgcccgcag ccgctcggat
      481 tccgccagct gggccagggc ccccacgcgc atcccttctg catccacggg cacgggcagg
      541 cagcgcgccc ctgcgcgggc aaaggcctcc caggcgccgg gatggcccag ggcctccacg
      601 gccaccgcct cccccgggga gatcagcgcc tggcccgcca ggaacagggc catctggctg
      661 ccgcgggtga cgaggatgtt ctccggggag gccgcgatgc cccgggattc gcccagcatc
      721 cgggccagcg actggcggag catgggatgc ccctggggat cctccagctc caggttctgc
      781 tggcggttca gcaccagggc ccggcggtag gcgcgggcca gttccgcccc gggcagcagg
      841 cggggatccg gcaggccgct ggccaccttc agcaggcccg gagccccctt gggcgcttcc
      901 tccagccgtc cggaagccag gtcgaacccc atggccgttc ccccgcgaac cgcctcgctc
      961 gggccagcct gcccgtgcat ccgcgtgggc ggatccgggg ccacgacact gccctccccc
     1021 ggcgtggaca caacccagcc ctccgcctgc agctcccggt aggcggccat gaccgtattg
     1081 cggctcaccc ccagccgctc cccgagggtg cggtagccgg gcaggggatc gcccggatgg
     1141 aggcggcccc ggtggatctc ctgcatgagg gagtgggcga tctgcagata gaccggctcc
     1201 cggctctggg gatcgagaaa gacggtgggc gtccgagcgc tcagggctgg ctccggggag
     1261 ggggttccag tctacgggat ccacctgagc aaaggaatgt tgttggaacc ggagcatcgg
     1321 actggggccc ggccccctcg ggggtggccc accttctatt cccaaagcgg ccctgtcagc
     1381 ccctcaagac cgtggccaac cttcagacga ttccctggag gccacccatg tccgacatcc
     1441 acgctccttc cccatcgccg gcccggcgca gaaacaggcc tctcctggcc ctgggcgccg
     1501 gccttgcggc cgtcctgttg atggcttgcg gcgggggcgg tggcagttct gccccgtcct
     1561 cgcctccgcc ggcagccacg gcgactctga cctccatcac cctggccccc tcggggcccg
     1621 ccctcaatgt cggcgcgtcc gcggatatcc aggccacagg ccacttctcc gatggcacca
     1681 cgatcacgcc ctacgacagt gaggtgacct ggacctccag cgccccgggg acggcttccg
     1741 tttccgccag cggcctggtg agcggagtgg cggccgggac cgccaccatc accgcggcca
     1801 agggcgccat ccagggttcg gccacggtga ccgtcaatgc ctccgccgcc atcctcacct
     1861 ccatcaccct caacccggcg gcgggcgtca ccctgaatgt cggacagact gcggatttca
     1921 ccgccaccgc ccactggtcc aatggcacca ccaccactcc ctacgattcc accgtcacct
     1981 ggaccaccaa cctccccaac gtggccaccg tgaactcggc gggggtcgtc acggccgtcg
     2041 ccgcgggagc ggccatcctc acagccactg ccaacggcct caacaccacg gcggccatca
     2101 ccgtgagcgc ctccagcccc accctcacgg ccatcaccct caccccggcg agcagcaccc
     2161 tgagcgttgg gcagaccgtg gacatcacct cggccgcgat ttggtccaac ggcaccggca
     2221 ccacacctta cgattcctat ctgacttgga ccagttccgc gccctccgtg gccaccgtga
     2281 acgcaggcgg cgtggtgacc gctatcgccg ctggaaccgc gaccatcacc gcgagcctgg
     2341 gcggcgtgtc ccgcacggct gccatcaccg tcagtgccgg ccccgcagcc gccctgactg
     2401 gcctcagcat gctccagtcg accagctcgc tgcaggtggg ccagtccacc ggcattgtcg
     2461 tgatggcccg ctggtccgat ggcac
//
LOCUS       DASUDT010000459         2840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1125740, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000459 DASUDT010000000
VERSION     DASUDT010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125740"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..689)
                     /locus_tag="VFV26_09480"
     CDS             complement(<1..689)
                     /locus_tag="VFV26_09480"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4846437.1"
                     /translation="MAVPMLELAPQNAAVKTKVLEGLSGLIDRSSFILGENVKGLEAE
                     ISAYAGAAHAVAMSSGTDAQLAALMALGIGHGDEVIVPSFTFFATAGVVSRLGAKPVF
                     IDLDPATFNATGALVEAAITPRTKAIMPVHLFGQLADMPGIMAVGARHGIPVIEDACQ
                     SLGAKGWGKSAGQFGDMTAYSFYPTKNLGAFGDAGMTAIRDDAAMAARVRRIRVHGME
                     PVYMHHEVGMNG"
     gene            complement(854..2368)
                     /gene="lysS"
                     /locus_tag="VFV26_09485"
     CDS             complement(854..2368)
                     /gene="lysS"
                     /locus_tag="VFV26_09485"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX4846438.1"
                     /translation="MQPNQYRDVRLEKLEKLKALGLDAWPRKAKRTHGIAELAAAYAD
                     AEAWPNERLEGLGLTVSAMGRVLTIREMGKSVFAHLTENGEKLQAFFRKDDVAEPGWD
                     ILKLLDMGDFISVTGPLMRTKTGELSVRVKEVQFLSKALLPLPEKWHGLQDKEQRYRQ
                     RYLDLISNGDVLKTFQTRSRIVSAVRRFMEDQGYLEVETPMMQAIPGGATARPFITHH
                     NALDMELYLRIAPELYLKRLIVGGFEKVFEINRNFRNEGLSVRHNPEFTMMEFYAAGQ
                     DLRDMMALTEGLISTLARDVVGSESLPWGEQTISYAAPFRRLTMKDAIAEYGHIDRHQ
                     LEDSDSVRTLARAVHIEDADTKTVGTLLGDLFEHHAEKQLIQPTFITDYPIELSPLTK
                     TLEGDDRFVDRFELFIGGMELANAYSELNDPIDQMGRFQAQMDEREAGNDEAMLLDQD
                     FITSLEHGFPPCGGEGIGIDRLVMLLTNSASIRDVILFPLMRPTKPADVPDITE"
     gene            complement(2409..>2840)
                     /locus_tag="VFV26_09490"
     CDS             complement(2409..>2840)
                     /locus_tag="VFV26_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846439.1"
                     /translation="LPTGKQADFSGSGSTDALRGVAGWKRLGRVKVFGQAERVMLGLP
                     RHSPLRPVLGDASFNRAWASAAWLGEGPGLVGGMGLEISLGYAGSPYRTGLPRLDRAG
                     WQQHWTLRHTRLPRWRFGVSEEAGTFNAPDITAYVAYRFRD"
BASE COUNT          446 a          900 c          980 g          514 t
ORIGIN      
        1 ccgttcatgc ccacctcgtg gtgcatgtag acgggctcca tgccgtggac gcggatgcgc
       61 cgcaccctcg ccgccatagc cgcgtcgtca cggatggccg tcatcccggc atcgccgaag
      121 gcgcccaggt tcttggtggg atagaagctg taggcggtca tatccccgaa ctggcccgcg
      181 gacttgcccc agcccttggc gcccaggctc tggcaggcgt cttcgatgac ggggatgcca
      241 tgcctggcgc ccacggccat gatgccgggc atgtccgcca gctggccgaa gagatgcacg
      301 ggcatgatgg ccttggtgcg cggcgtgatg gccgcctcca ccagggcgcc cgtggcgttg
      361 aaggtggcgg ggtcgaggtc gatgaagacc ggcttggccc ccaggcgcga caccacgccc
      421 gccgtggcga agaaagtgaa gctggggacg atgacctcgt caccgtgccc gatgccgagc
      481 gccatgaggg ccgccagctg cgcatccgtg ccgctggaca tggccacggc gtgggccgcg
      541 ccggcgtagg cggagatctc cgcctccagg cccttcacgt tctcgcccag gatgaacgag
      601 gaacggtcga tgaggcccga aaggccttcc agcaccttgg tcttcacggc ggcgttctgc
      661 ggggcgagct caagcatcgg gacggccatg ggagcctcca atcagggttt tcaagtatgg
      721 cagcgggtca agcccgattc cgtcacatcg actcaacggt gttcagggct caaaagattc
      781 accaccaagg caccaaggca ccaagaactg cttttgtctt tcttggtgtc ttggtgtctt
      841 ggtggtgatc agttcattca gtgatgtcag gcacatcggc cggtttggtc ggacgcataa
      901 gggggaacag gatgacgtcg cggatgctgg cgctgttggt gagcagcatg accaggcggt
      961 cgatgccgat gccttcgcca ccgcagggcg ggaagccgtg ctccagactg gtgatgaagt
     1021 cctggtccag cagcatggcc tcgtcgttgc ccgcttcgcg ctcgtccatc tgggcctgga
     1081 agcggcccat ctggtcgatg ggatcgttca actcggagta ggcgttggcc agctccatgc
     1141 cgccgatgaa cagctcgaag cggtccacga agcgatcatc gccctccagc gtcttggtga
     1201 ggggggacag ctcgatgggg tagtccgtga tgaaggtggg ctggatgagc tgcttttccg
     1261 cgtgatgctc gaagaggtcg cccagcaggg tgcccacggt cttcgtgtcg gcgtcctcga
     1321 tgtgcacggc ccgggccagg gtccgaacgc tgtcgctgtc ctccagctgg tggcggtcga
     1381 tgtggccgta ctcggcgatg gcgtccttca tggtcaggcg gcggaagggc gcggcgtacg
     1441 agatcgtctg ttcgccccag ggcagggatt cggagcccac cacgtcccgc gcgagcgtgg
     1501 agatcagtcc ttcggtgagg gccatcatgt cccgcaggtc ctgccccgcg gcgtagaact
     1561 ccatcatggt gaactcgggg ttgtggcgga cgctgaggcc ttcattgcgg aagttgcggt
     1621 tgatttcgaa gaccttttcg aagccgccca cgatgagccg cttgaggtac agctccggcg
     1681 cgatacgcag gtagagctcc atgtccaggg cgttgtggtg cgtgatgaag ggccgggccg
     1741 tggcgccgcc gggaatggcc tgcatcatgg gcgtttcgac ttccaggtag ccctggtcct
     1801 ccatgaagcg ccggacggcg ctgacgatgc gcgaccgggt ctggaaggtc ttcagcacgt
     1861 cgccgttgga gatgagatcg aggtagcgct ggcggtagcg ctgctccttg tcctggaggc
     1921 cgtgccactt ctcgggcagg ggcaggagcg ccttgctgag gaactggacc tccttcaccc
     1981 gcacgctcaa ttccccggtc ttggtgcgca tgaggggccc ggtgacgctg atgaaatcgc
     2041 ccatgtccag gagtttgagg atatcccagc ccggctcggc cacatcgtcc ttgcggaaga
     2101 aggcctggag cttctcgccg ttctccgtga ggtgggcgaa cacgctcttg cccatttcgc
     2161 ggatggtgag cacgcggccc atggccgaca ccgtgaggcc cagtccctcc agcctctcgt
     2221 tgggccaggc ttcggcatcc gcataggcgg cggcgagctc ggcgatgccg tgggtgcgct
     2281 tcgccttccg cggccaggca tccaggccga gggccttcag cttctcgagc ttctcgaggc
     2341 gcacatcgcg gtactggttg ggctgcatgg aggctccggc acgaaccatc tagtttaccg
     2401 aagcggcctc agtctctgaa gcgataggcc acataggccg tgatatccgg ggcgttgaag
     2461 gtgcccgctt cttcgctgac gccgaaccgc cagcggggca ggcgcgtgtg ccgcagggtc
     2521 cagtgctgct gccagccggc ccggtccagg cgcggaaggc ccgtgcggta gggactgccc
     2581 gcatagccca ggctgatctc caggcccatc ccgccgacga ggcccgggcc ctcgcccagc
     2641 catgcggcgg aagcccaggc gcggttgaag gaggcatcgc ccaggaccgg ccgcaggggg
     2701 ctgtgccggg gcaggcccag catcacccgc tccgcctggc cgaagacctt gacgcggccg
     2761 aggcgcttcc agcccgccac cccccgcagg gcatcggtgc ttccgctgcc cgaaaaatcc
     2821 gcctgcttcc cggtgggcag
//
LOCUS       DASUDT010000460         5507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1964926, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000460 DASUDT010000000
VERSION     DASUDT010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5507
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964926"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..890)
                     /locus_tag="VFV26_09495"
     CDS             complement(126..890)
                     /locus_tag="VFV26_09495"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4846440.1"
                     /translation="MESGPDRYGRLAYRNLIAWPERLTREAPLLQRVLEGAPSRRVLD
                     LGCGSGEHARFLASLGYDPTGVDASASQVAAARQADPEGSYVQGSLTALADLVAPDFG
                     AAICVGNTLPHLTEEEDLRRCFEGLAGRLRPGGVFLLQTLNYDRILDRGDRTFPVMVR
                     PGEEGAETVFLRLMTPRAGGRLTFTPATLRWRPGAEPPLELISAEEIQLRGWRRAELE
                     ALLRGAGFEVREALGGMTGDPWSPASQDLVLVAAKG"
     gene            complement(895..1458)
                     /locus_tag="VFV26_09500"
     CDS             complement(895..1458)
                     /locus_tag="VFV26_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846441.1"
                     /translation="MVSLTHLWLPIVLSAVFVFAASSLIHMVLKWHASDYRALPNEEE
                     VRAALQKAAQSPGQYVIPHCGDMKDMEKPEMQQKYKDGPIGFIMLSPNGAPNMGKALG
                     MWFLYSLAVAFMAAYVASRTLGPGTHYLQVFRVVGAVSFLTYAGGSVQMGIWAGKPWR
                     SVVKDLADGLIYGLVSAGAFGWLWPKL"
     gene            complement(1520..2044)
                     /gene="tsaA"
                     /locus_tag="VFV26_09505"
     CDS             complement(1520..2044)
                     /gene="tsaA"
                     /locus_tag="VFV26_09505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEX4846442.1"
                     /translation="MESFTCRPIGFVRSPYAKRIDAPHQPTVVAGTETGAPAEATLEL
                     EAWVPETALRDLEGFERIWLIFAFHLSEGWAPLVQPPRGPKRKRGVLATRSPHRPSAI
                     GLSCVELVAIEGRTLRLRGVDLLDGTPVLDLKPYVPYADAFPGARAGWIDAVDAATGA
                     HSAPGPRKPRRPPA"
     gene            2092..3117
                     /gene="rsmH"
                     /locus_tag="VFV26_09510"
     CDS             2092..3117
                     /gene="rsmH"
                     /locus_tag="VFV26_09510"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX4846443.1"
                     /translation="MDDANTPRPRRPRYKGTHPRRFEEKYKELSPGQHAGELEKVMAR
                     GHTPAGTHRPIMVGEILAALDPKPGETALDATLGYGGHTRELLPKLLPGGRLVGLDVD
                     PIELPRTEARLRGQGFDETALTVRRTNFASLAKVAAELGPFDLVLADLGVSSMQIDNP
                     ARGFTWKAEGPLDLRLNPQKGRPAADLLATLDVPALAELLVANADEPHADAIARAAAG
                     RALRTTRELADCVRGALPGLEDDELKKALQRTFQALRIAVNDEFGVLDRFLAQLPAAL
                     RPGGRVAILTFHSGEDRRVKKAFQQGLREGAYGEIAPEPRRASPEERHANPRSTSAKL
                     RWAIRSA"
     gene            complement(3190..3645)
                     /gene="dut"
                     /locus_tag="VFV26_09515"
     CDS             complement(3190..3645)
                     /gene="dut"
                     /locus_tag="VFV26_09515"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005038042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX4846444.1"
                     /translation="MRIPVHQLPHGLGLDLPAAATAHAAGMDLRAAIPEGEVWLIAPG
                     QRRLVPTGLVMAIPQGFEGQVRPRSGLALKHGLTVLNAPGTIDADYRGEVQVLLINHG
                     EVPFELSRGERIAQLLVAPVESWTWIPEPSLEALGDTGRGGGGYGSTGR"
     gene            3852..4928
                     /locus_tag="VFV26_09520"
     CDS             3852..4928
                     /locus_tag="VFV26_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846445.1"
                     /translation="MVFVACKREDPQIRALTEKASQADEASQQLRQAWSEQFRRLGLA
                     GIRDLRSEADPLLLTEDQKKALEARVHEEKDNSRRGLLREILDKDAELRAFHDRLVDL
                     KATLPAPEIARPNDSHYGLALRFLRRQGQSDTEARRALSRVVISDRIAPGFEVYHFYA
                     NGEYGTWVSQGTASITPRSLARQNPDPLVGERNQAVAAGRRLQRELRVLESQKQSIEQ
                     EIAAIQAERRLVLEGHTRLQSENAQQLARLNSLHYLVGVQDALEREGIIEVPLFGKDQ
                     SGPTWRDAAFTQNLDLRSGHTLIIRAQDLGLRQISKVNVVPGSYTQGEHYRLTLSADR
                     QTATVELLALPRFKNDKVVFAVVE"
     gene            5085..>5507
                     /locus_tag="VFV26_09525"
     CDS             5085..>5507
                     /locus_tag="VFV26_09525"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX4846446.1"
                     /translation="MSSLFGHTLAGLTLSAAFHQGRPPRRVQVFATACAVAPDLDWFT
                     AFLGLDGTSLAHRGMSHSLPALMLLAAAAMALGFRAQLRSPRLWACMLSAALSHSLLD
                     ACTFGGTGVAFLLPFSEARFVCLWQPIFVSPIPLSGKLL"
BASE COUNT          835 a         2002 c         1880 g          790 t
ORIGIN      
        1 acaccaagac accaagaaaa ccagccactg tggctttgca gttcttggtg ccttggtgtc
       61 ttggtggtgt tccttttaaa aggcagattc gtacgcgctg gagctcaggc caaagcgggg
      121 aggaatcagc ccttcgcagc caccaggacg aggtcctgcg aggccgggct ccaggggtcg
      181 ccggtcatgc cgcccagcgc ctcgcgcacc tcgaaaccgg ccccccgcag cagggcctcc
      241 aactcggcgc ggcgccagcc gcggagctgg atctcttctg cggagatcaa ctccaggggc
      301 ggctcggcgc cggggcgcca gcgcagggtg gcgggcgtga aggtcaggcg gccaccggcc
      361 ctgggcgtca tcaggcgaag gaagacggtc tcggcgccct cctcgccggg ccgcaccatc
      421 accgggaagg tgcggtcgcc gcggtccagg atgcggtcgt agttcagggt ctggagcagg
      481 aagacgccgc cgggccgcag gcggcccgcc agcccctcga aacagcggcg caggtcctcc
      541 tcttccgtga gatggggcag cgtgttgccc acgcagatcg ccgcgccaaa atcgggcgcc
      601 accaggtccg ccagggccgt gaggctgccc tgcacatacg aaccttccgg gtccgcctgc
      661 cgggcggccg ccacctggga ggccgaggcg tccacacccg tgggatcgta gccgagggag
      721 gccaggaagc gcgcgtgttc cccgctgccg cagcccagat ccagcacccg gcgcgagggc
      781 gccccctcca gcacccgctg gagcagcggc gcctcgcgcg tcaggcgttc cggccaggcg
      841 atgaggttcc ggtacgcgag gcggccgtag cggtcgggac cggattccat gggctcagag
      901 cttcggccag agccagccga aggcgccggc gctcaccagg ccgtagatga ggccgtcggc
      961 cagatccttg accacgctgc gccagggctt gccggcccag atgcccatct gcacgctgcc
     1021 gcccgcatag gtgaggaacg acacggcgcc caccacgcgg aacacctgca ggtagtgggt
     1081 gccgggcccc agggtgcggg aggccacgta ggcggccatg aaggccacgg ccagggaata
     1141 gaggaaccac atgcccaggg ccttgcccat gttgggcgcg ccgttggggc tgagcatgat
     1201 gaagccgatg gggccgtcct tgtacttctg ctgcatctcc ggcttctcca tgtccttcat
     1261 gtcgccgcag tgcgggatca cgtactggcc ggggctctgc gcggccttct ggagggccgc
     1321 gcgcacttcc tcctcgttgg gcagggcgcg gtagtccgag gcgtgccact tgaggaccat
     1381 gtggatgagg ctgctcgccg cgaagacgaa gaccgccgac aggacgatgg gcagccagag
     1441 atgggtgagg gaaaccatgg ggggctcctg gggttggggg tgggggattg ggtagggtgg
     1501 accggggccc ggggccccgt caagcgggag gccgccgcgg cttcctcggc cccggtgccg
     1561 agtgggcgcc cgtggccgca tccacggcgt cgatccaccc ggcccgggcg ccgggaaagg
     1621 catcggcgta gggcacgtag ggcttcaggt ccagcaccgg cgtgccatcc agcaggtcca
     1681 cgccgcgcag gcggagcgtg cgtccctcga tggccaccag ctccacgcag gagagcccga
     1741 tggcgctggg ccggtggggc gagcgcgtgg ccagcacgcc ccgcttgcgc ttcgggcctc
     1801 gcggcggctg caccaggggc gcccagcctt cactcagatg gaacgcgaag atgagccaga
     1861 tgcgctcgaa gccctccaga tcccgcagcg ccgtctccgg cacccaggcc tccagttcca
     1921 gcgtggcctc cgccggggcg cccgtctccg tgcccgccac caccgtgggc tggtgcggcg
     1981 catcgatgcg cttcgcatag ggtgagcgca cgaagccgat ggggcggcag gtgaaggatt
     2041 ccatgcccga agggtagcgc cccggccccg gtctgcggcg atcatggagc catggacgat
     2101 gcgaacaccc cccgcccgcg ccggccccgc tacaagggca cccatccgcg ccgcttcgag
     2161 gaaaagtaca aggaactctc tcccggccag cacgccggtg agctggagaa ggtgatggcc
     2221 cggggccaca cgcccgcggg gacccaccgc ccgatcatgg tgggtgaaat cctggcggcc
     2281 ctcgacccca agcccggcga gacggccctg gacgccaccc tgggctacgg tggccacacg
     2341 cgggagcttc tgccgaagct gcttcccggg ggccgcctag tgggcctgga cgtggacccc
     2401 atcgaactcc cccgcaccga ggcccggctg cggggccagg gcttcgacga aaccgcgctc
     2461 acggtgcgcc gcacgaactt cgccagcctc gccaaggtgg ccgcggaact gggccccttc
     2521 gacctcgtgc tggcggacct gggcgtctcc tccatgcaga tcgacaatcc ggcccggggc
     2581 ttcacctgga aggcggaggg ccccctggat ctgcggctca atccccagaa gggacgccct
     2641 gccgcggacc tgctggccac cctcgatgtg cccgccctgg cggagctgct ggtggcgaac
     2701 gccgacgaac cccatgccga tgccatcgcc cgggccgcgg cgggccgggc gctccgcacc
     2761 acgcgggagc tcgcggattg cgtgcgcggg gccctgcccg gcctggagga cgacgagctc
     2821 aagaaggccc tccagcgcac cttccaggcc ctgcgcatcg ccgtgaacga cgagttcggc
     2881 gtgctggacc gcttcctcgc ccagctgcct gcggccctgc ggcccggcgg acgggtggcc
     2941 attctcacct tccattccgg cgaggaccgc cgggtgaaga aggcctttca gcagggcctc
     3001 cgcgaaggcg cctacgggga gatcgctccg gaaccccggc gcgcctcgcc ggaagagcgc
     3061 cacgccaatc cacgctccac cagcgccaag ctgcgctggg cgatccggtc cgcctgaacg
     3121 tcagccttcc cggccggccc ggaaggtatc cgggaagaac cccattcggg cgattcgcgg
     3181 ttctgtcttt cagcgccccg tgctgccgta gccgccgccg ccgcgcccgg tatcgcccag
     3241 ggcctcgagg ctgggctcgg ggatccaggt ccagctttcc acgggggcca ccagcagctg
     3301 ggcgatgcgc tcgccgcggc tgagctcgaa gggcacctcg ccgtggttga tgaggagcac
     3361 ctggacctcg ccgcggtagt cggcgtcgat ggtgccgggc gcgttcagca ccgtaagacc
     3421 gtgcttcagg gccagacccg agcggggccg cacctgccct tcgaagccct ggggaatggc
     3481 catcaccagc cccgtgggca ccagccgccg ctggcccggc gcgatcagcc acacctcgcc
     3541 ctcgggaatc gccgcccgga ggtccatgcc cgccgcatgg gccgtggccg ccgcaggcag
     3601 gtcgaggccg aggccgtggg ggagctggtg gacgggaatg cgcatccgaa aagagtccat
     3661 gcaagggcac ggcggtgcaa agggaaatcc gcccccctcc cctgtcgggc tccggtccct
     3721 tggcccgagc ctcccgcgtg aatacactcg atggctgtcc cgggtgtcct ggactgtcct
     3781 tgaccgggag ggtcatgatc tgcgatggcc gtcggtccct cgttgccgtt ctagggtcgg
     3841 ccgctctccc aatggtcttc gtggcctgca agcgggagga tccccagatc cgcgccctga
     3901 cggagaaggc gtcccaggcc gacgaagcct cccagcagct gcggcaggcc tggagcgagc
     3961 agttccgcag gctcggcctg gccggaatcc gggacctccg gtccgaggcc gatcccctgc
     4021 tcctgaccga agaccagaag aaggccctcg aggcgcgggt gcacgaggag aaggacaact
     4081 cccggcgggg cctcctgcgg gagatcctgg acaaggatgc ggagctgcgg gcgttccatg
     4141 accggctggt ggatctcaag gccactcttc ccgccccgga aatcgcacgg cccaacgaca
     4201 gccactacgg gctggccctg cggttcctca ggcgccaggg gcagtcggac acggaggcca
     4261 ggagggccct cagccgcgtg gtcatctcgg accgcatcgc cccgggcttc gaggtctatc
     4321 acttctacgc caacggtgag tacggcacct gggtctccca gggcacggcc tccatcaccc
     4381 cccggagcct cgcccgccag aatccggatc ccctcgttgg tgagcgcaac caggccgtgg
     4441 ccgccggccg ccggctccag cgggaactga gggttctgga gagccagaag cagagcatcg
     4501 agcaggagat cgccgccatc caggcggagc ggaggctcgt cctggaagga cacacccggc
     4561 tccagtcgga gaatgcccaa cagctggccc ggttgaactc cctgcactac cttgtcggcg
     4621 ttcaggacgc cctcgaacgg gaggggatca tcgaggttcc cctgttcggc aaggaccagt
     4681 caggcccgac ctggcgggat gcggccttca cccagaacct ggacctccgg tccggccaca
     4741 ccctcatcat ccgggcccag gacctgggct tgcggcagat cagcaaggtg aacgtggttc
     4801 ccgggtccta cacccagggc gaacactacc gcctgaccct cagtgccgac cggcagaccg
     4861 ccacggtgga actgctcgcc ctgccccgct tcaagaacga caaggtggtg ttcgcggtgg
     4921 tggagtgacc gcgctgctgg acccgttctg atgccaggga tatcatggcg gtcagcgcgt
     4981 tctgctgatc tggcatcgat ccaaggcggg tttcggccga gcgccttccg aacatgtccg
     5041 gcccccaagc ccggcctgcc cccgtactga ttcccggaac ccccatgtcc tccctcttcg
     5101 gccacaccct ggctggcctc accctcagcg cagccttcca ccagggccgg cccccccgcc
     5161 gggtccaggt ctttgcgacc gcctgcgccg tggccccgga tctggactgg ttcaccgcct
     5221 tcctggggct cgacggcacc agcctggccc accgcgggat gagccattcc ctccccgccc
     5281 tgatgctcct ggccgccgcg gccatggccc tcggattccg agcccagctc cggagccccc
     5341 gcctctgggc ctgcatgctc tccgccgccc tctcccacag cctgctggac gcctgcacct
     5401 tcggcgggac gggcgtggcc ttcctgctgc ccttctccga ggcccggttc gtctgcctct
     5461 ggcagcccat cttcgtgtcg ccgatccccc tctccggcaa gctgctc
//
LOCUS       DASUDT010000461         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_2119845, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000461 DASUDT010000000
VERSION     DASUDT010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119845"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VFV26_09530"
     CDS             complement(<1..663)
                     /locus_tag="VFV26_09530"
                     /inference="COORDINATES: protein motif:HMM:NF015859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE domain-containing protein"
                     /protein_id="HEX4846447.1"
                     /translation="MALGVLVVSLGATFLTWNTSRHNQEQRDLSRLNRFVGRTEQNLR
                     NRLGRYEDIVRGAQGFFAASQGPVTVEDWRAYVERLDLLGRHPDLSGLAFVRQVPASG
                     LEAFLRERPWLAGHYRRPTSDPLPLRGSGQDEDHLIIELCEPNPRGQAIVGVDVGASQ
                     TQRLAAERARETGEPVLSGQLHFSFTAPEGRMDAVALFMPVFAGPTRPGSAAGPQPAF
                     QGW"
     gene            833..1279
                     /locus_tag="VFV26_09535"
     CDS             833..1279
                     /locus_tag="VFV26_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846448.1"
                     /translation="MELLDEFLPYAQSCLKHPAERARLAALLTLWVAKWRGKHRVLDH
                     ARSHHGAFLHFNQLMNGKWVQAFTFVATRREGVCLRGPDPDRTRKSHKFRHNPLDAAP
                     LDALFEAWSLHPEARPAGHAVEFFLEETPDDVWAACLAEALAQLGA"
     gene            complement(1281..2267)
                     /locus_tag="VFV26_09540"
     CDS             complement(1281..2267)
                     /locus_tag="VFV26_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HEX4846449.1"
                     /translation="MSPRHLLATFLLASCLGAVPPAAVVHGGAGSPRTRMDGTDPAAA
                     KALAALKAGASALDAALEGVVVLENDPRFNAGTGANIRLDGKTIQMDAACMDGASGGF
                     GAVAAIERVKNPVLVARKVMDTPHILIVGEGATRFARAMGFPDFDPTCAENKARFQRV
                     QSILKGSDPRQIEAWKRYDWKKAWNFPTPLKEALGSPDTVGCVTRDAQGRFAAAISTG
                     GTTITFYGRVGDVPMFGAGIYAGPKGAVACTGNGEDIVKRLVAKAAYDLLAQGLSAQE
                     AVDRTLADFPATIDLGLVAVGPASTGGGCNYSPEKKAFVKDYRNQMAWSVRE"
     gene            complement(2277..>2620)
                     /locus_tag="VFV26_09545"
     CDS             complement(2277..>2620)
                     /locus_tag="VFV26_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX4846450.1"
                     /translation="RWPLEPLEDGQGAVARRWRYRDGQGELGLVASVTAPFCRGCDRA
                     RLSAEGRLYTCLFAGQGLDVRSFLRGRHSDADLAALLGFHWKRRDDRYSELRRGATPG
                     LPRVEMSRIGG"
BASE COUNT          372 a          909 c          971 g          368 t
ORIGIN      
        1 ccagccctgg aaggccggct gggggccggc ggccgatccg ggcctggtgg gaccggcgaa
       61 gaccggcatg aagagggcca cggcatccat gcgcccttcg ggggccgtga aactgaagtg
      121 gagctggccg gacagcaccg gctcgccagt ctcccgggcc cgttccgcgg ccagacgctg
      181 ggtctggctg gcgcccacgt ccacgcccac gatggcctgc ccccgggggt tcggctcgca
      241 cagctcgatg atcaggtggt cttcatcctg tcccgaaccg cggaggggca gggggtccga
      301 ggtgggccgc cggtaatgcc cggccagcca gggccgttcc cgcaggaagg cctccagtcc
      361 ggaggccggg acctggcgca cgaaggccag gccggacagg tcggggtggc gccccaggag
      421 gtccaggcgt tccacgtagg cccgccagtc ctccaccgtc acggggccct gggacgccgc
      481 gaagaatccc tgggcgccgc gcacgatgtc ctcgtagcgt cccaggcggt tccggaggtt
      541 ctgctcggtc cgccccacga agcggttgag gcggctgaga tcccgctgct cctggttatg
      601 gcgcgaggtg ttccaggtca ggaacgtggc gcccagactc accaccagca cccccagggc
      661 catcagccac ggccccctcg ggtgggggcg ggcagggacg gagggatggg gaggtgaagg
      721 catggtctgt tatttagaag ggaacccttc atggtagcgg ggtttggcgg gtgaaggact
      781 gatccggagg gaccgggcct gcggtagggt ggaatccgct ggaggcctcc ctgtggaact
      841 gctcgacgaa ttcctgccct atgcccagag ctgcctgaag caccccgccg agcgggcccg
      901 cctcgcggcc ctgctgaccc tctgggtggc caagtggcgc gggaagcacc gggtcctgga
      961 ccatgcccgc agccaccacg gggccttcct ccacttcaac cagctcatga atggcaagtg
     1021 ggtgcaggcc ttcaccttcg tggccacccg gcgggaaggc gtctgcctgc ggggccccga
     1081 tccggaccgc acccggaaat cccacaagtt ccgccacaac cccctggacg ccgctcccct
     1141 ggacgccctc ttcgaggcct ggtccctgca tcccgaagcc cgccccgccg gccacgccgt
     1201 ggagttcttc ctggaagaga cgccggatga cgtctgggcc gcctgcctgg ccgaggccct
     1261 ggcgcagctg ggggcctagg ctactcccgc acgctccacg ccatctggtt gcggtagtcc
     1321 ttcacgaagg ccttcttctc gggggagtag ttgcagccgc cgccggtgct ggcggggccc
     1381 acggccacca ggcccaggtc gatggtggcg gggaagtccg ccagggtgcg gtccacggcc
     1441 tcctgggcgg aaaggccctg ggccagcagg tcgtaggcgg ccttggccac cagccgcttg
     1501 acgatatcct cgccgttgcc cgtgcaggcc acggcgccct tggggccggc gtagatgccc
     1561 gcgccgaaca tgggcacgtc gcccacgcgg ccgtagaagg tgatggtggt gccgccggtg
     1621 ctgatggcgg cggcgaagcg cccctgggca tcccgggtga cgcagcccac ggtgtcgggc
     1681 gaacccagcg cttctttcag cggcgtgggg aagttccagg ccttcttcca gtcgtagcgc
     1741 ttccaggcct cgatctggcg ggggtccgag cccttgagaa tgctctgcac gcgctggaag
     1801 cgggccttgt tctcggcgca ggtggggtcg aagtcgggaa agcccatggc ccgggcgaag
     1861 cgggtggcgc cttcgcccac gatgaggatg tggggcgtgt ccatcacctt gcgggccacc
     1921 agcacggggt tcttcacgcg ctcgatggcg gccacggcgc cgaagccccc cgaggcgcca
     1981 tccatgcagg cggcgtccat ctggatggtc ttgccgtcca ggcggatgtt ggcgccggtg
     2041 cccgcgttga agcggggatc gttctccagc accaccacgc cctccagggc cgcatcaagg
     2101 gcggaggccc cggccttcag ggccgccagg gccttggccg cggcggggtc ggtgccgtcc
     2161 atgcgggtgc gcgggctgcc ggcgccgccg tggaccaccg ccgcgggcgg gacggcgccg
     2221 aggcaggagg ccaggaggaa ggtcgcgaga aggtggcggg gggacatgcc aagatcctac
     2281 ccgccgatgc gcgacatctc caccctgggc aggcccggcg tggcgccccg ccggagttcg
     2341 gagtagcggt catcccgccg cttccagtgg aaaccgagca aggcggccag atcggcgtcg
     2401 ctgtggcggc cccggaggaa gctgcgcaca tccagcccct gcccggcgaa gaggcaggtg
     2461 tagaggcggc cctcggcgga caggcgggcc cggtcgcagc cccggcagaa gggggcggtg
     2521 accgaggcga cgaggcccag ctcgccctgg ccgtcccggt agcgccagcg ccgcgccacg
     2581 gcgccctggc cgtcctccag gggctcgagg ggccaccgga
//
LOCUS       DASUDT010000462         2159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_485764, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000462 DASUDT010000000
VERSION     DASUDT010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485764"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1212)
                     /locus_tag="VFV26_09550"
     CDS             complement(<1..1212)
                     /locus_tag="VFV26_09550"
                     /inference="COORDINATES: protein motif:HMM:NF019353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846451.1"
                     /translation="MFALGISDFSIGEGVYPAKQLLSLARQLGYRDLVCWDRGVAGYP
                     KLRGALEWIHKSRELEGLPPDPRWTGFRLHLGSRFTWRGHAYGALPFTDAGYAALNRL
                     LSAQAHEGAVTPIPGLGEAEPPQDCVLLAEDLAGLDALLREGFYAALLGHPRRAQEAR
                     KALAAGLEVVAPQVLRFRTAEGLEMHRLKRAIDRQTTLIRTEALWDPAEAAVPRADWE
                     VRFPFCEAAVERATAAVLERLSGWNLHWGGWVLADPLGREGADLDGLLREKVQTGMMA
                     RFKDPGGEVVARMERELDLISFKGFARYFLLVEDIVRAAQGAMPRICGRGSGAASLVS
                     YALGLSNVDPLATNLMFERFLTKERKDPPDMDIDFAWDEREDVIQKVFERYGRHRVAM
                     VANHAFFKAKGA"
     gene            complement(1285..1746)
                     /locus_tag="VFV26_09555"
     CDS             complement(1285..1746)
                     /locus_tag="VFV26_09555"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEX4846452.1"
                     /translation="MSTSVHPDHPESRATHLWFERGRLVVQLQDGRELACPLTFFPRL
                     AAASAEDLADWRLIGRGTGIHWPRLDEDLSVEGLLEGRRAPEADARAKALAPRLRAAR
                     SQTGLTQAQLAQRMGRSQALVSLAERGALRIGTPYLRAVLDACGLPHDWQP"
     gene            complement(1724..1966)
                     /locus_tag="VFV26_09560"
     CDS             complement(1724..1966)
                     /locus_tag="VFV26_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HEX4846453.1"
                     /translation="MTPTIHREGPFRFFFYSHEPREPPHVHVERDDAIAKLWLHDASI
                     ADSGGFPPRDLQRAAAIVLAHRDHFLEAWHEYFGPP"
BASE COUNT          356 a          734 c          773 g          296 t
ORIGIN      
        1 ggcgcccttg gccttgaaga aggcgtggtt ggccaccatg gccacgcgat ggcggccgta
       61 gcgctcgaac accttctgga tgacgtcctc ccgctcgtcc caggcgaagt cgatgtccat
      121 gtccggcgga tccttgcgct ccttcgtgag gaagcgctcg aacatcaggt tcgtggccaa
      181 gggatccacg ttgctgagac ccagggcata gctcaccagc gacgccgcgc cactgccccg
      241 gccgcagatg cgcggcatgg cgccctgcgc ggcccgcacg atgtcctcca ccagcaggaa
      301 gtagcgggca aagcccttga aggagatgag gtccagctcc cgctccatgc gggccaccac
      361 ctcgccgccc gggtccttga accgggccat catgcccgtc tgcaccttct cccgcaggag
      421 gccgtcgagg tccgcgcctt cgcggcccag gggatcagcc aacacccatc cgccccagtg
      481 gaggttccag cccgagaggc gctccaggac ggccgccgtg gcccgttcca ctgcggcctc
      541 gcagaagggg aagcggacct cccagtcggc gcgggggacg gcggcctcgg cgggatccca
      601 cagggcctcc gtgcggatga gcgtcgtctg ccggtcgatg gcccgcttca gccggtgcat
      661 ctccaggccc tcggccgtgc ggaagcgcag cacctggggt gccaccacct ccaggcccgc
      721 cgccagggcc ttgcgggcct cctgggcgcg gcgggggtgg cccagcaggg cggcgtagaa
      781 gccttcacgc agcagagcat ccagtcccgc cagatcctcc gccaacagca cgcaatcctg
      841 cggcggctca gcttcgccca ggcccgggat gggcgtcacc gcgccctcgt gggcctgggc
      901 cgagagcagg cggttcaggg cggcgtagcc cgcgtccgtg aagggcagcg ccccgtacgc
      961 gtggccccgc caggtgaagc ggctgcccag gtgcaggcgg aagcccgtcc agcggggatc
     1021 cggcggcagg ccctccagct cgcgggactt gtggatccat tccagcgcgc cccgcagctt
     1081 cgggtagccc gccacgccac ggtcccagca gaccaggtcg cggtagccca gctgccgcgc
     1141 cagcgacagc agctgcttcg ccgggtagac accttcacca atagagaaat cggagatgcc
     1201 gagggcgaac atggggacag accagaggga aaaagggccg ccacaagagg tcatctcgtg
     1261 gggatctttt tgatggagat gggatcaggg ctgccagtcg tggggcaggc cacaggcgtc
     1321 gaggacggcc cgcaggtagg gggtgccgat gcgcagagcc ccccgttccg cgaggctcac
     1381 gagggcctgg gagcggccca ttcgctgggc gagctgggct tgagtgaggc cggtctgact
     1441 gcgggcggcc cgcaatcgcg gagccagggc cttggcccgg gcatccgctt cgggagcacg
     1501 acggccctcc aatagcccct ctacggacag atcctcgtcc aggcgcggcc aatggatgcc
     1561 cgtgccgcga ccgatgagac gccagtccgc cagatcctcg gcggaggctg ccgccaatcg
     1621 ggggaagaag gtcagcgggc aggccagctc ccggccgtcc tggagctgga cgaccaggcg
     1681 cccccgctcg aaccagaggt gcgtggcgcg ggactcggga tgatcagggt ggaccgaagt
     1741 actcatgcca cgcctctagg aaatggtcgc ggtgggcaag gacaatggcc gccgcccgct
     1801 gaagatcccg gggcggaaag ccgccggaat ccgcgatgga cgcatcgtgg agccacagtt
     1861 tggcaatggc gtcgtcgcgc tcgacatgga catggggcgg ctcgcggggt tcatggctgt
     1921 agaagaagaa ccggaagggc ccttcccggt ggatggtggg ggtcacgggg cctccatgaa
     1981 tattaggctt ttatcagctt gtttcaagac aaaccggccc catccacccc ggcaggacgg
     2041 cccggtcggg gaagcggcgg cggaggcggg caagggcggg ctcgaggcgt tcgagcttgg
     2101 cgttccgggg gtcttcgaag aggccgcgct cgcgccccag gccccaggcc aggcgcagc
//
LOCUS       DASUDT010000463         3248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1611725, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000463 DASUDT010000000
VERSION     DASUDT010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1611725"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1217
                     /gene="mnmA"
                     /locus_tag="VFV26_09565"
     CDS             84..1217
                     /gene="mnmA"
                     /locus_tag="VFV26_09565"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX4846454.1"
                     /translation="MSSLLSRAQETLMEHPTLRPGDRVLAAMSGGVDSSVMAALLHRS
                     GFEVIGISMQLFDKKTIQTSDGKCCTLDDFQDARRVAHEMGFAHYVMDFETRFRDTVI
                     EGFIQGYLDGETPSPCIRCNQHLKFSALMERAEALEAPFVATGHYATILQEDGRWRLR
                     KASDPAKDQSYFLFHHTQATLARTLFPLAHLTKPEVRSLGAELGLHLAEKPESQEICF
                     VTQDRYDAFLEAEGRDPGRGEGDIRHLDGRALGRHHGYWRHTVGQRRGLGVAHSEPLY
                     VVRVEAATNTVWVGGEGDLLGRDLVARELSWVDGPPAGPLACEARIRSRSPEAEALVI
                     PLPDGRVKVAFAEPQRAIAPGQAVVFYRDGAVLGGGWIDHRSL"
     gene            1253..1780
                     /locus_tag="VFV26_09570"
     CDS             1253..1780
                     /locus_tag="VFV26_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846455.1"
                     /translation="MLSYRLWVQAHPYLSAALQFALLGTLGEIVAASLRARRATLPCT
                     VPQLLAKALAWALLGLVIKAGFVGMRGFTRALLEHHILPAFLGSGLGWAFALSTLTNV
                     FFGPQMMLFHRLEDNLILRRRGFDGMGPALWTLVWFWIPAHTLTFSLPVDYQVGLAAL
                     WSLALGLILGLRPKA"
     gene            complement(1794..2822)
                     /gene="amrB"
                     /locus_tag="VFV26_09575"
     CDS             complement(1794..2822)
                     /gene="amrB"
                     /locus_tag="VFV26_09575"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HEX4846456.1"
                     /translation="MGIPSQGDLRGQQDAVGFASRADQMAKIWERSALGPEPELLGPR
                     PAPGVAGLISPHDDYLYAGRVYRQLLPLVKARTVLLVGVFHKYRRFGAKNALVFDAYR
                     AWHAPDGEIRVSGLREDLLARLPAADALQDAAMQDSEHSVEAIAYWLKHLNPEVEIVS
                     ILVPSASFERFQELSAHLGKALAESMKTRGWALGRDLSIVISSDGIHYGSDFKYTPHG
                     EGGVAAYTEALDRDRALLKGPLAGPVSPEKARAFFQAVVNPQNPDEYRMPWCGRFSVP
                     FGLLLLEETARNLGLAAPIGHPVVFGTSIGSPQIPVRDLGLGATAEANLFHFVSYPGV
                     AYTAGPKR"
BASE COUNT          518 a         1138 c         1076 g          516 t
ORIGIN      
        1 ctaccagacg gcctacgagc tcttcaaagc gaagaagtac aattgatgtc tccacttccg
       61 gacctgctca ggaaatccag accgtgagtt cactcctttc ccgtgcccag gaaaccctga
      121 tggagcaccc cacgctgcgg ccaggggacc gggttctcgc cgccatgtcc ggcggtgtgg
      181 acagctccgt gatggccgcc ctgctccacc ggtccggctt cgaggtcatc ggcatttcca
      241 tgcagctctt cgataagaag accattcaaa cttctgatgg aaagtgctgc acgctcgatg
      301 acttccagga cgcccgccgt gtcgcccatg agatgggatt cgcccactac gtgatggatt
      361 tcgagacccg cttccgcgac acggtcatcg aaggtttcat ccagggatat ctggatggtg
      421 aaacccctag tccctgcatc cgttgcaacc aacacctcaa gttctccgca ctgatggagc
      481 gggccgaggc cctggaggcg cccttcgtgg ccaccggcca ctacgccacc atcctccagg
      541 aggatggccg ctggcggctc cgcaaggcct cggacccggc caaggaccag agctatttcc
      601 tcttccacca cacccaggcc accctggccc ggaccctgtt ccccctggcc cacctcacca
      661 agcccgaggt ccggagcctg ggcgccgagc tggggctgca cctggcggaa aaacccgaaa
      721 gccaggagat ctgcttcgtc acccaggacc gctatgacgc attcctggag gccgaaggcc
      781 gggatccggg tcggggcgag ggcgacatcc gccacctgga tgggcgggcc ctgggccgcc
      841 accacggcta ctggcggcac accgtgggcc agcgtcgggg cctgggcgtg gcccattccg
      901 aacccctgta tgtggtccgg gtcgaagccg ccaccaacac cgtgtgggtg ggtggcgaag
      961 gggatcttct gggacgcgac ctggtggccc gggagctgag ctgggtggac ggccccccgg
     1021 cgggcccgct ggcctgcgaa gcccgcatcc gcagccgctc gccggaagcc gaggccctgg
     1081 tgatccccct gcccgacggc cgggtgaagg tggccttcgc ggaaccccag cgggccatcg
     1141 cgcccggcca ggccgtggtc ttctaccggg atggcgcggt cctgggcggc ggatggatcg
     1201 atcaccggag cctgtgatcc gggcccgccc gcgctcccgc tagccttcag ggatgctcag
     1261 ctaccgcctc tgggtccagg cccaccccta cctctctgct gccctccagt tcgccctgct
     1321 gggcaccctg ggcgagatcg tggccgccag cctgcgggcc cggcgggcca ccctgccctg
     1381 caccgtcccc cagctgctgg ccaaggccct ggcctgggcc ctgctcggcc tggtcatcaa
     1441 ggcgggattc gtgggcatgc gcggcttcac ccgggccctg ctggagcacc acatcctgcc
     1501 cgccttcctg gggtcgggcc tgggctgggc cttcgccctg tccacgctga ccaacgtgtt
     1561 cttcgggccc cagatgatgc tgttccaccg gctggaggac aacctcatcc tccgccgccg
     1621 gggcttcgac ggcatggggc cggccctctg gaccctggtc tggttctgga tccccgcgca
     1681 caccctcacc ttcagcctgc ccgtggacta ccaggtgggg ctggcggccc tctggtccct
     1741 ggccctgggc ctcatcctcg gcctgcgtcc gaaagcctga cggactccag gccttatcgt
     1801 ttcggccccg ccgtgtaggc cacgccgggg tagctcacga agtggaagag gttcgcctcg
     1861 gccgtggcgc ccaggcccag gtcccgcacg gggatctggg gagagccgat ggacgtgccg
     1921 aagaccaccg ggtgtccgat gggagcggcc agtcccaggt tccgggcggt ctcctccaac
     1981 agcagcaggc cgaacggaac ggagaagcgg ccacaccagg gcatgcggta ctcgtcgggg
     2041 ttctgcggat tcaccacggc ctggaagaag gcccgggcct tctccggaga gacgggacca
     2101 gccagggggc ctttcagcag ggcacgatcc cggtccaggg cctccgtgta ggccgcgacg
     2161 cccccttcgc catggggcgt gtatttgaag tccgaaccgt aatggatgcc atcggacgag
     2221 atgacgatgg acagatcccg ccccagggcc cagccgcggg tcttcatgct ctctgccagg
     2281 gccttcccca ggtgggctga cagttcctgg aagcgctcga acgaggcgga gggcaccagg
     2341 atggagacga tctccacctc ggggttgagg tgcttcagcc agtaggcgat ggcttcgacg
     2401 gaatgctcgc tgtcctgcat ggccgcatcc tggagggcgt ctgctgcggg gaggcgcgcc
     2461 agcagatcct cgcgcaggcc cgagaccctg atctccccgt ccggcgcatg ccaggcccgg
     2521 taggcatcga agacgagcgc gttcttagcg ccaaagcggc ggtacttgtg gaagacgccc
     2581 accagcagga cagtcctggc cttcaccagg ggcagcagct ggcggtacac gcggcccgcg
     2641 tacaggtagt cgtcgtgggg ggagatgagg cccgccacgc ccggagcagg cctgggcccg
     2701 agcagctcgg gctccggtcc cagggctgat cgctcccaga tcttggccat ctggtcggcc
     2761 ctggaggcga agcccacggc gtcctgctgg ccccgcagat ctccctggga cgggatgccc
     2821 atgcctttcc ggacctcctc caacgtgggg cgctgaagag gaacaggctg catggcgaga
     2881 gaagcctggg ccaaaaccgg cagacaggca gagaggcagg cacagagggc gggaatgcgg
     2941 accatgtggg aatctccgga accaccctaa cagcccggct cgggccattc cccggagccg
     3001 gattcagcca cgcacaaaaa agcccccttg cgggggctgg tcttggaggc gccgatcgga
     3061 gtccggttcc cgccgcgcgg ctggctgcgc acggcccttc gcgccaggaa cgccacaccc
     3121 ggtggcgtcc ctggcggggc ctacctgcgc gccatccgcg acttcgactc cggtcggcgc
     3181 aaaaaagccc ccttgcgggg gctggtcttg gaggcgccga tcggagtcga accgatgcat
     3241 acgggatt
//
LOCUS       DASUDT010000464         2623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_242200, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000464 DASUDT010000000
VERSION     DASUDT010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242200"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VFV26_09580"
     CDS             <1..362
                     /locus_tag="VFV26_09580"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX4846457.1"
                     /translation="AAEAAGADLICLCGWLKKLAVPARWEGRILNIHPGLLPRWGGAG
                     MYGMHVHRAVLAAGEAESGATVHLVDGEYDHGRILEQVRVPVLPGDAPEDLQKRVYAA
                     EMDLYPRALAAHLAERA"
     gene            410..1804
                     /locus_tag="VFV26_09585"
     CDS             410..1804
                     /locus_tag="VFV26_09585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX4846458.1"
                     /translation="MIPLLTAGEMRAAERRAIEAWGIPSLVLQEHAALGALALIPRDE
                     PVQVLAGPGNNGGDALALARLARLEGRDVAVWCPVPQPEWRGDAAHQARLWVGLGGEI
                     GTSGTPAELMRTWRGWVVDGLFGLGTTRPLEGAAAAWVHALNASGLPVLALDLPSGLD
                     PSCAEVPGAVVRATRTACFGAMKVCHGLMPAREACGEITVVPIPLDRAPEAAMQVLER
                     PALTPRAWNAHKGSFGHVVIRAGSLGMSGAAVLAALGALRVGAGLVTVLTESDVRAEI
                     AAQVPEAMVRPWQGVVPSEADVLLVGPGGIAQVPDWDGPLVLDASALKDGEGQRWMDR
                     PGTAITPHPGEFARLFGLPRPLLMDERLAQARQVSSGRPGVLLLKGAQSVLAGGACDE
                     LWINPTGHPGMATGGSGDLLAGMVAGFRAQGLPMREAVAAAAWFHGAAGDRLPGPGLV
                     PRDLADQLPELLRG"
     gene            1797..2219
                     /gene="tsaE"
                     /locus_tag="VFV26_09590"
     CDS             1797..2219
                     /gene="tsaE"
                     /locus_tag="VFV26_09590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX4846459.1"
                     /translation="MAERFLADDAATEALGEALARLTPPGGTWLLRGELGAGKTTWTR
                     GFLRGLGGDPDEVASPTYAVLHRYGLPEGRLFHLDLYRPGPEGAWALGLEEAIEPGDR
                     LVVEWAGQDGPWPSDWVAGLTLSAEGGGRRAEWTLPGE"
     gene            2239..>2623
                     /locus_tag="VFV26_09595"
     CDS             2239..>2623
                     /locus_tag="VFV26_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846460.1"
                     /translation="MSLSLIAILLACLGAVLALWAALRKDPAPFEALRRHAEELASRN
                     RAESHQALVSQLQPLAADLGQLRTAQAEKLGEGFRQLTGAVQEALRASRSEQAAQLAL
                     VQQQVQQRLEAIQASTEARLEQMRRT"
BASE COUNT          316 a          913 c         1040 g          354 t
ORIGIN      
        1 gggccgccga ggccgcaggc gcggacctga tctgcctgtg cggctggctg aagaagctgg
       61 cggttccggc gcgctgggag ggccgcatcc tcaacatcca tccgggcctg ctgccccgct
      121 ggggcggcgc gggcatgtac ggcatgcacg tccaccgggc cgtgctggcg gcgggcgagg
      181 cggaatccgg cgccacggtg catctggtgg acggggaata cgaccacggg cgcatcctgg
      241 agcaggtgcg ggtgcccgtc ctccccggag acgccccgga ggacctccag aagcgggtct
      301 acgcggccga gatggacctg tacccgagag ccctggctgc ccatctggcc gaacgggcct
      361 agactgtccg catgagcatg aagcaggatg cgacaggcgg aggtgccgcg tgatccccct
      421 cctcaccgcg ggcgagatgc gggctgcgga gcgccgggcc atcgaggcct ggggcatccc
      481 gtccctggtg ctccaggagc acgccgccct gggggccctg gccctgatcc cccgagacga
      541 gcccgtgcag gtgctggcgg gcccgggcaa caacggcggc gatgccctgg ccctggcccg
      601 gctggcccgg ctggaaggcc gtgatgtggc cgtgtggtgc ccggtgccgc agcccgagtg
      661 gcgcggagat gccgcccacc aggcccggct gtgggtgggc ctcggcgggg agatcggcac
      721 ttccggaacc ccggcggagc tgatgagaac ctggcgcggc tgggtggtgg acggcctctt
      781 cggcctgggc accacgcggc ccctggaggg cgcggcggcg gcctgggtcc acgccctgaa
      841 cgcctccggc ctgccggtgc tggccctgga cctgccatcg ggattggacc ccagctgtgc
      901 cgaggttccg ggcgcggtgg tgcgggccac gcggaccgcc tgtttcggcg cgatgaaggt
      961 ctgccacggt ctgatgcccg cccgggaagc ctgcggggag atcaccgtgg tgcccatccc
     1021 cctcgaccgg gctcccgaag ccgccatgca ggtcctggag cgcccggctc tgacccccag
     1081 ggcctggaac gcgcacaagg gcagtttcgg ccatgtggtc atccgcgccg gcagcctggg
     1141 catgagcggg gccgcggtgc tggcggccct gggggcgctg cgggtgggcg ccggcctggt
     1201 gacggtgctg acggaatccg acgtgcgggc tgagatcgcc gcgcaggtcc ccgaggccat
     1261 ggtgcggccc tggcagggcg tggtgccctc ggaagctgac gtgctgctgg tgggcccggg
     1321 tgggattgcc caggtgccgg attgggacgg cccgctggtg ctggacgcct cggccctgaa
     1381 ggatggggag gggcagcgct ggatggaccg gcccggcacc gccatcacgc cccaccccgg
     1441 tgaattcgcg cggctgttcg ggctgccccg ccccctgctg atggacgagc gtctggccca
     1501 ggcccggcag gtctcgtccg ggagaccggg agtgcttctg ctcaaggggg cccagagcgt
     1561 cctggcgggg ggcgcctgcg atgagctgtg gatcaacccc acgggccatc cgggcatggc
     1621 cacggggggc agcggcgacc tgctggcggg gatggtggcc ggcttccgcg cccagggcct
     1681 gcccatgcgc gaggccgtcg ccgcggcggc ctggttccat ggcgccgccg gggaccgtct
     1741 gcccgggccc ggcctggtgc cgcgggatct ggcggatcag cttccggagt tgctgcgtgg
     1801 ctgaacggtt cctggcggat gatgccgcca ccgaggccct gggcgaggcc ctggcccggc
     1861 tcacgccgcc cgggggcacc tggctgctgc ggggagaact gggtgccggc aagaccacct
     1921 ggacccgggg cttcctgcgg ggcctggggg gcgatcccga tgaggtggcc tcgcccacct
     1981 atgccgtgct ccaccgctac ggcctgccgg agggccgcct cttccacctg gacctctacc
     2041 gtcccggccc ggagggggcc tgggcgctgg gtctggagga ggccatcgag cccggggacc
     2101 gcctggtggt cgaatgggcg gggcaggacg ggccctggcc ctcggactgg gtggccgggc
     2161 tgacgctgtc cgccgagggc gggggccgcc gggcggaatg gacactgcct ggcgaatgaa
     2221 aggcctgatc atgggggcat gagcctctcc ctgatcgcga tcctgctggc ctgcctcggg
     2281 gcggtcctgg ccctctgggc cgcgctgcgg aaggacccgg cgcccttcga ggccctgcgg
     2341 cgccacgcgg aggagctggc ctccaggaac cgggccgaat cccaccaggc cctcgtctcc
     2401 cagctccagc ccctggcggc ggacctgggc cagctgcgca cggcccaggc ggagaagctg
     2461 ggggagggct tccgccagct caccggggcg gtgcaggagg cgctccgggc ctcgcggtca
     2521 gagcaggccg cccagctggc cctggtgcag cagcaggtcc agcagcggct cgaggccatc
     2581 caggcctcca cggaggccag gctcgaacag atgcgccgca ccg
//
LOCUS       DASUDT010000465         3929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1170253, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000465 DASUDT010000000
VERSION     DASUDT010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3929
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1170253"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /locus_tag="VFV26_09600"
     CDS             complement(<1..834)
                     /locus_tag="VFV26_09600"
                     /inference="COORDINATES: protein motif:HMM:NF019931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueG-associated DUF1730 domain-containing
                     protein"
                     /protein_id="HEX4846461.1"
                     /translation="MPVEHLDPLAFKAWLRTEALSAGFAAAGFAPCGPFEAEEGRVRD
                     WFDTGRGALLPYLDPAALLDPRSVFPQARTALVGFFPYARPEAVPGAAPGSLKLSRYL
                     WGPDYHMILKPRLARLLEAAQARWPGLEGRVCVDTAPLLERQLAARAGLGWQGKHTLL
                     IAGKDGSWGFLGVLLLSVDLPVDEPVATEFCGTCTTCLEACPSGALEPFLLDPARCLT
                     TYTIETEAEPPAGVAAAMADSRWAAGCDACQEACPWNRAPVWGDPALWGGPSPLHTRP
                     AG"
     gene            851..1426
                     /locus_tag="VFV26_09605"
     CDS             851..1426
                     /locus_tag="VFV26_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846462.1"
                     /translation="MDILTLELLDVTVFQALLELRSQMAEHPGEALRVRGEDEMLRIN
                     VAGFLEKQGRPARLIQQGSQWELQVPPVSGAAPGRIPPVVAPPGPRPVLLLRSAFAPG
                     DRALGRRLLLETLAHLQPGTPWLCLAHQAIELLEDPLAVAALEALLNRGIPVRVSATS
                     LAHLGLGPLGFAPVPDTEWQKLLAQGGVNVL"
     gene            1453..2100
                     /gene="pgsA"
                     /locus_tag="VFV26_09610"
     CDS             1453..2100
                     /gene="pgsA"
                     /locus_tag="VFV26_09610"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX4846463.1"
                     /translation="MNLPNFLSLARILMVPVLVVVLMTKVTNHEVIGVVVFWVASITD
                     ALDGYLARRWKQVTTLGKLLDPLADKLLVAGALISLVELNLAPAWMTFIILSREFAVT
                     GLRGIASEEGLTIPAGTVGKWKMGFQVAAISCLILGPRLDYWLYEWTHKDIFHFFIQL
                     NRPYSFFWGMGVLLLWGAVILAIWSAISYFRGFWKVVGPSIMSEGGRLTGHKDSE"
     gene            2097..2711
                     /locus_tag="VFV26_09615"
     CDS             2097..2711
                     /locus_tag="VFV26_09615"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEX4846464.1"
                     /translation="MIRKYLVAGLFTLLPLVVTVWILKGIFTTLVGIFRAPLTWLAHM
                     VRVPDPPIWALALLSALATLLLLLLAGALVGNFVGRQLLAWLDDLMLQVPVVKTIYGA
                     TRQLMGAIQSGQGGSFKEVVLVEWPHPGSFTLGFVAQRDCSWAVPGGEEMLAVYVPTS
                     PNPTSGYVVMIEASRVRPLDVSADQALTWAVSGGVVVPGGHGPR"
     gene            2773..3195
                     /locus_tag="VFV26_09620"
     CDS             2773..3195
                     /locus_tag="VFV26_09620"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEX4846465.1"
                     /translation="MSVLVWNPDWETGIRIVDDQHRELFRRIEQLMAAVHDGQAQALV
                     PAAMAFLAQYVDQHFRSEELEMEGSGYPGFAAHRAIHEDMRGHVAHLLELCRSDPSAV
                     IDPMIDFMTDWLIQHINSEDRRMARYLHAASGPPGALA"
     gene            3230..>3929
                     /locus_tag="VFV26_09625"
     CDS             3230..>3929
                     /locus_tag="VFV26_09625"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4846466.1"
                     /translation="MTAGLAGRRILVTGAGSGIGRAAARLFKDRGADLVLAGRRLAAL
                     QETLPDAVHVVLDHSDDAAVAAFARQCPELDGMFLNAGELRLGSVASTPISDFDSVMA
                     ANLRGPWLMAHHLGGRLKEGASVVLVGSNIGLRAIPDSAAYSVAKAGIHMLAKVLALE
                     WAPRRIRCNAIAPGPVRTAMVESRLASSADPEGDLARLAGVNPLHRLGTEAEVAALAA
                     HLLSGESGWTTGAVI"
BASE COUNT          558 a         1323 c         1403 g          645 t
ORIGIN      
        1 tcctgcggga cgggtgtgca ggggactggg gccgccccag agggccgggt cgccccagac
       61 cggcgcccgg ttccaggggc aggcctcctg gcaggcatcg cagcccgcgg cccagcggct
      121 gtcggccatg gccgccgcca ccccggcggg cggttccgcc tcggtttcga tggtgtaggt
      181 ggtgaggcag cgggccgggt ccaagagaaa gggctccagg gccccggagg gacaggcctc
      241 caggcaggtg gtgcaggtgc cgcagaattc ggtggccacc ggctcgtcca cgggcagatc
      301 cacggacagc agcagcacgc cgaggaaacc ccaggagcca tccttgccgg cgatgagcag
      361 ggtgtgcttg ccctgccatc ccagccccgc ccgggccgcc agctggcgtt ccagcagggg
      421 ggccgtgtcc acgcagaccc ggccctccag gccgggccac cgggcctggg ccgcctccag
      481 cagccgggcc agccggggct tgaggatcat gtggtagtcg ggcccccaga gataccggct
      541 cagcttgagg ctgcccggag ccgctccggg cacggcttcg ggccgggcat aggggaagaa
      601 gcccaccagg gccgtgcggg cctgggggaa gaccgaccgg gggtcgagga gggcggccgg
      661 atccagatag ggcaggaggg cgccccggcc ggtgtcaaac cagtccctta cgcggccttc
      721 ctctgcctcg aaggggccgc agggggcgaa tcccgcggcg gcgaagccgg cggaaagggc
      781 ttcggtgcga agccaggcct tgaacgccaa tggatccagg tgttcaactg gcatttgaag
      841 gccgcctccc atggatatcc tcaccctcga actgctcgat gtcacggtct tccaggcgct
      901 tctggaactg cggtcccaga tggccgaaca ccctggcgaa gccctgcggg tccgcggcga
      961 ggacgagatg ctgcggatca atgtggcggg attcctggaa aaacaggggc gcccggcgcg
     1021 gctgatccag cagggcagcc agtgggagtt gcaggtgccg cctgtgtccg gcgcggcgcc
     1081 cgggcggatt ccgccggtcg tggcaccgcc cggcccccgg cccgtgctcc tgctccgcag
     1141 cgccttcgcc cccggggacc gcgccctggg ccggcgcctg ctgctggaga ccctggcgca
     1201 cctgcagccc ggcaccccct ggctttgcct ggcccaccag gccatcgaac tgctggagga
     1261 tcccctggcg gtggcggccc tggaggcgct gttgaaccgg ggcatccccg tccgggtttc
     1321 cgcgacgagc ctcgcccacc tgggcctggg ccctctgggc tttgcgcccg ttcccgacac
     1381 cgagtggcag aagctcctgg cgcagggcgg cgtgaacgtg ctgtaggctg gagtcggagc
     1441 cgcacgcccc ccatgaacct acccaacttc ctgtcgcttg cacggatcct catggtcccg
     1501 gtcctggtcg tggtgctcat gaccaaggtg acgaaccacg aagtcatcgg cgtcgtggtc
     1561 ttctgggtgg cttccatcac ggatgccctg gacggctacc tggcccgccg ctggaagcag
     1621 gtgacgaccc tgggcaagct gctggatccc ctggcggaca agctgctggt ggccggggcc
     1681 ctgatctccc tggtggaact gaacctggct cccgcctgga tgaccttcat catcctctcc
     1741 cgcgaattcg ccgtgacggg cctgaggggc atcgccagtg aagaggggct gaccattccg
     1801 gcgggcaccg tcggcaagtg gaagatgggc ttccaggtgg cggccatctc ctgcctcatc
     1861 ctcggtccgc gcctcgacta ctggctctac gaatggaccc acaaggacat cttccatttc
     1921 ttcatccagc tcaaccgtcc ctacagcttc ttctggggca tgggcgtgct gctgctgtgg
     1981 ggcgccgtga tcctggccat ctggagcgcg atctcgtact tccgcgggtt ctggaaggtc
     2041 gtcgggccga gcatcatgtc cgaggggggc cgcctcaccg gccacaagga ttcggaatga
     2101 tccgcaaata cctcgtcgca ggcttgttca cccttctgcc cctggtggtg acggtctgga
     2161 tcctcaaggg catcttcacc acgctggtcg gcatcttccg ggcgcctctc acctggctgg
     2221 cccacatggt ccgggtgccg gatccgccga tctgggcgct ggcgctgctt tccgccctgg
     2281 caacgctgct gctgctgctg ctggcgggcg cgctggtggg caacttcgtg gggcgccagc
     2341 tgctggcctg gctggacgat ctgatgctcc aggtgcctgt cgtgaagacc atctacggtg
     2401 ccacccgcca gctcatgggg gccatccagt cggggcaggg gggcagcttc aaggaggtgg
     2461 tcctggtgga gtggccccac ccgggatcct tcaccctggg cttcgtggcc cagcgggact
     2521 gctcctgggc cgtgcccggg ggcgaggaga tgctcgccgt ctatgtgccc acgtcgccca
     2581 acccgacctc cgggtacgtg gtgatgatcg aggcttcgag ggtccggcct ctggatgtga
     2641 gcgcggacca ggccctgacc tgggcggtca gcggcggcgt ggtggtgccc gggggccatg
     2701 ggccgcggtg aacctccggc gggggatgag gctatactcc cccacgcctg cgggcgcatg
     2761 gaggggcttc ctgtgagcgt gctcgtgtgg aatccggact gggagactgg catccggatc
     2821 gtcgatgatc agcaccgcga gttgttccgg aggatcgaac agctcatggc ggcggtccat
     2881 gacggccagg ctcaagcgct ggttcctgcc gcgatggcgt tcctggctca gtacgtggat
     2941 cagcacttcc gcagcgagga gcttgaaatg gaaggctccg gctatccggg gttcgccgcc
     3001 catcgggcca tccatgagga catgaggggg cacgtggccc atctgctgga gctgtgccga
     3061 agcgatccat cagcagtcat cgatccgatg atcgatttca tgacggactg gctcatccag
     3121 cacatcaaca gcgaggaccg gcgcatggcc aggtacctgc acgccgcttc cggcccgccg
     3181 ggggccctcg catgagtccg aggatccttt ctcaccggag aggtgcggca tgacggctgg
     3241 gctggcgggc agacgcatcc tcgtgaccgg cgcgggcagt ggcatcggcc gggccgcggc
     3301 gcggctcttc aaggaccgcg gggccgacct ggtcctggcg ggccggcgcc ttgccgcgct
     3361 ccaggagacc ctgccggacg cggtccatgt ggtgctggac cattcggacg atgcggccgt
     3421 ggcggccttc gcccggcaat gccccgagct ggacggcatg ttcctgaacg cgggggagct
     3481 gcggctgggt tccgtggcct ccaccccgat ctcggatttc gactcggtga tggcggcgaa
     3541 cctccgcggt ccctggctca tggcccacca cctggggggc cgcttgaagg agggcgccag
     3601 cgtggtgctg gtgggctcca acatcggcct ccgggccatc cccgacagcg cggcctacag
     3661 cgtggccaag gccggcatcc acatgctggc caaggtgctg gccctggagt gggccccccg
     3721 gcgcatccgc tgcaacgcca tcgcgccggg cccggtccgc acggccatgg tggagtcgcg
     3781 cctggcttcg agcgcggacc ccgaggggga tctggcccga ctggcaggcg taaatccact
     3841 tcaccggctg ggcacggaag cggaagtcgc cgccctggcg gcccacctgc tgagtggtga
     3901 gagcggatgg acgacggggg ccgttattc
//
LOCUS       DASUDT010000466         3575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1877418, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000466 DASUDT010000000
VERSION     DASUDT010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1877418"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1326
                     /locus_tag="VFV26_09630"
     CDS             169..1326
                     /locus_tag="VFV26_09630"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEX4846467.1"
                     /translation="MLHLPPLYPITDATLAEPLSAQIRRLGEAGFPLVQFRGKPLEAP
                     AQWAELRKSLEESRANGGWPLICLNDRADLAVLAAREGLTPWGLHLGQDDLPATEARR
                     LPGLAAVHIGTSTHEPGEWGGVDSACDHAGIGPFRGTATKPDHAEPVGLDGLRAGSMV
                     LRERDLAPIAIGGLRLADAASCFEAGAESLAMVGEIHRAADPAALGWEAQRVRWRARP
                     PFAPGQGLVLLGGSGAGKSTLGRTLAWRLNLPFHDLDLVIEEDQGFPVGAIFAEGGEA
                     AFRALESALLPALLARPAVVALGGGAWEAPANRRAVAEAGFAPLWLAESPARAWERVG
                     RDPRRPLAQDRGAFMARCAARTPAWSQAPMVLPFGHSSRDLASALLGSVSK"
     gene            1438..2178
                     /locus_tag="VFV26_09635"
     CDS             1438..2178
                     /locus_tag="VFV26_09635"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX4846468.1"
                     /translation="MDLILSDLHANLHALRAVLRFARRRAIHRFVLLGDLVGYGANPN
                     QLLDKVRELRPRFMVRGNHDKVCAGLEPDNAFSLPARQAADWTREKLRQDNWRFLADL
                     PVGPLWVGEDYQIAHGSPVDEDAYLLHMREISLAFDAFEGPLCFFGHTHLPGCFELDE
                     ALGRLNWICLQPGVWFEMQPHCRYLVNPGSVGQPRDRDPRLSFMTFDPARKRLRLHRL
                     EYDVKGAAKAILAAGLHRNLADRLGQGI"
     gene            2210..2890
                     /locus_tag="VFV26_09640"
     CDS             2210..2890
                     /locus_tag="VFV26_09640"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4846469.1"
                     /translation="MSAPVLEQFLIQARLTGAVASLRLQGAPARLLGDLRIHAFRTGS
                     ALELAGLHVRDAMPVEGTTVTLTVLLGEEVLTLESTLLPSTRAEDGDTLLRLAWPHES
                     ARLHRRRDMRVAAPEQSPLKARVSLEGRSLEALLVNLTETGVGLAFKEVLMVDLHAAV
                     EIDAELPDGAVLRCPGEVRHLTYLEGQDYPTRLGVVLHPAPGADLGPIHRFIQARRTD
                     RSQGFRQG"
     gene            complement(3161..>3575)
                     /locus_tag="VFV26_09645"
     CDS             complement(3161..>3575)
                     /locus_tag="VFV26_09645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846470.1"
                     /translation="DKKAVYMGYAFLYGVIGSLIGSSLGGMLYGSMLKPLVGQAGGPA
                     AARTFWLIFVALNIVAAVGLILYDRKFAADTPETNEKARKVMLGIYLLLLAAGLLFVW
                     SAVFGGPVVSYKTLVQAVIMLLLGAGGTIVSLRKG"
BASE COUNT          523 a         1317 c         1183 g          552 t
ORIGIN      
        1 tccggagata ctgcttcttg ctgcggcgcc atgcgccgcg tcgatccttg agatcggcac
       61 cgtcccaacg aatctgcctc gcccaacctc aaaagccgtc gccaccgaag gcggccacag
      121 ggatccgtac ctccagactc cggactccag tctgtagact ggatccccat gctccacctg
      181 ccccccctct accccatcac cgatgccacc ctcgcggagc cgctctccgc gcagatccgg
      241 cggctggggg aggcgggctt tcccctggtg cagttccggg gcaagcccct ggaggccccg
      301 gcccagtggg ccgaactccg gaagagcctc gaagagtcgc gcgcaaatgg gggctggccc
      361 ctaatttgcc tcaacgacag ggccgacctg gccgtgctgg ctgcccggga gggcctcacg
      421 ccctggggcc tgcacctggg ccaggatgat ctgcctgcaa ccgaggccag gcggctcccg
      481 ggactggcag ccgtccacat cggcacctcc acccacgagc ccggtgaatg gggcggcgtg
      541 gactctgcct gcgaccacgc gggcatcggc cccttccgcg gcacggccac caagcccgac
      601 cacgccgagc cggtcggcct tgatggcctg cgggcgggct ccatggtgct gcgggagcgg
      661 gatctcgccc ccatcgccat cggcggcctg aggctcgcgg atgcggcctc ctgcttcgag
      721 gcgggcgccg aatccctggc catggttggc gagatccacc gggccgccga tcccgcggcc
      781 ctgggctggg aggcccagcg agtgcgctgg cgcgcccgcc cacccttcgc ccccggacag
      841 ggcctcgtgc tcctgggcgg cagcggcgcc gggaaaagca ccctcggccg gaccctcgcc
      901 tggcggctga acctgccctt ccacgatctg gatctggtca tcgaggagga tcagggattc
      961 ccggtgggtg ccattttcgc cgaggggggc gaggccgcct tccgggccct ggaatcggcc
     1021 ctcctgcccg ctctgctggc cagacccgcg gtggtggccc tggggggcgg cgcctgggag
     1081 gcccccgcca accggcgggc ggtggccgag gccggattcg cgcccctctg gctggccgaa
     1141 tccccggccc gggcctggga acgggtgggc cgggaccccc ggcgtcccct ggcccaggac
     1201 cgcggggcct tcatggcccg ctgcgcggcg cggaccccag cctggtccca ggcgcccatg
     1261 gtcctcccct ttggccacag ttcccgggac ctggcctccg ccttgttggg atccgtttcg
     1321 aaataaccag tgctttctgg tggtttcgtt agggatcctg atgccgtcct gctcgccagg
     1381 atgaatagga attttgaaaa tgacggccta gactgatagc ccctccccgg acatccagtg
     1441 gacctgatcc tctccgatct gcacgcgaac ctgcacgccc tccgggccgt gctgcggttc
     1501 gcccggcggc gggccatcca tcgcttcgtg ctgctgggcg acctggtggg gtacggagcc
     1561 aaccccaacc agctgctgga caaggtgcgg gagttgcgac cccgtttcat ggtgcggggc
     1621 aatcacgaca aggtctgcgc gggcctggag cccgacaacg ccttcagcct gcccgcccgc
     1681 caggccgcag actggacgcg ggagaagctg cggcaggaca actggcgttt cctggcggac
     1741 ctgcccgtgg ggcccttgtg ggtgggcgag gactaccaga tcgcccacgg atcccctgtg
     1801 gacgaggatg cctatctgct gcacatgcgc gagatcagcc tggccttcga cgcattcgaa
     1861 gggcccctct gcttcttcgg ccacacccac ctgcccggct gcttcgagct ggacgaggcg
     1921 ctggggcggc tgaactggat ctgcctccag cctggcgtat ggttcgagat gcagccgcac
     1981 tgccgctacc tggtgaatcc ggggtccgtg ggccagcccc gggaccgcga tccgcggctc
     2041 tccttcatga ccttcgaccc cgcgcggaag cgcctgcgcc tccaccgtct ggaatacgat
     2101 gtcaagggcg ccgccaaggc catcctggcc gccggattgc accgcaacct ggcggaccgg
     2161 ctgggccaag gcatctgaaa ggcaccaccc catgggacat tcctccacct tgtccgcccc
     2221 cgtcctggag cagttcctca tccaggcccg cctcaccggg gcggtggcca gcctcaggct
     2281 ccagggcgcc ccggcccgcc tgctgggcga cctccgcatc cacgccttcc gcaccggctc
     2341 ggccctggag ctggccggcc tccacgtgcg cgatgccatg cccgtcgaag gcacgaccgt
     2401 caccctcacc gtgctgctgg gggaggaggt cctcaccctg gaatccaccc tcctcccctc
     2461 gacccgcgcc gaggacgggg acaccctcct gcgcctggcg tggccccacg aatccgcccg
     2521 cctgcaccgg cgccgggaca tgcgcgtggc cgcgccggaa cagtccccac tgaaggcccg
     2581 ggtcagcctg gagggtcgga gcctcgaggc cctgctggtg aacctcacgg aaaccggcgt
     2641 ggggctcgcg ttcaaagagg tcctgatggt ggacctgcac gcggccgtgg agatcgatgc
     2701 ggagctgcct gatggcgccg tcctccgctg ccccggcgaa gtgcggcacc tcacctacct
     2761 ggaaggccag gactacccca cccgcctcgg cgtggtcctg catcccgccc cgggcgccga
     2821 cctggggccc attcaccgct tcatccaggc gcggcgcacg gaccggtccc aggggttccg
     2881 gcaaggctga ggcaggcctc gcacggcccc tgggtggcct catacccatt gacgttcaat
     2941 cgtaaaagaa tccaccacgg agacacagag catgggcaca cgggagacgc cgggtccgga
     3001 tctcctcgat aggatccggg cccggcgtct cccgtggctt ccggccatgc cggaagcggc
     3061 ctctggcctg cccatgacgg aggaacacgg agggctccgt gccccctctg tggcctcggt
     3121 gtctccgtgg tgaatctcta tctttgaacg cggcttggcc tcagcccttg cggaggctga
     3181 cgatggtgcc acccgcgccc agcagcagca tgatcacggc ctggaccagg gtcttgtagg
     3241 acaccacggg gcccccgaag accgccgacc agacgaagag caggcccgcg gccagcagca
     3301 ggaggtagat ccccagcatg actttccggg ccttctcgtt ggtctccggg gtgtccgcgg
     3361 cgaacttccg gtcgtagagg atgaggccca cggcggcgac gatgttcagc gccacgaaga
     3421 tcagccagaa cgtccgggcg gccgcggggc cgccggcctg gcccaccagg ggcttcagca
     3481 tggagccgta gagcatgccg cccaggctgg agccgatgag gctgccgatg acgccgtaga
     3541 ggaaggcgta gcccatgtag acggccttct tgtcc
//
LOCUS       DASUDT010000467         5213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_352680, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000467 DASUDT010000000
VERSION     DASUDT010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 5213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5213
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352680"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..925
                     /locus_tag="VFV26_09650"
     CDS             <1..925
                     /locus_tag="VFV26_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846471.1"
                     /translation="QQALSLAPGHPAVLEGLERCRRPRSAPSPSPAMESIFDPQGRIA
                     MVEEEPTLIMVQPAPVEPPASLTKAAPAAREGLSLPDRFQGASTRLPWLREPKVWVWA
                     GSAALSLAVGLYALHTYRKDQELKEAVKAARAAAVAPVLQQAQAPDLAESPADILQEA
                     ETALGTDPLHAYLRVQALLALSPGDAAGAQLLEKARLGLPGGVAGASLPEFQKHLQNG
                     DLEAAAKVMDALLRAQPDDPGLRARAARMHLALCSAHASQARWIEAAGDLRRGRALFP
                     ADKTWQTRLRLLDRVKTLPRAEQAAWLPLLG"
     gene            complement(1170..2324)
                     /locus_tag="VFV26_09655"
     CDS             complement(1170..2324)
                     /locus_tag="VFV26_09655"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846472.1"
                     /translation="MNDLFAFDDATCQRLAEGHGTPCFAYSAAVAAEQFTALRQVLPS
                     RVRLAYAVKANPHPDLLTCFASLGASFDCASIGELGRVEALGLPMGRTFFAGPGKREA
                     ELEKALAMGVRVQAEGWEDLARIDALVDRETAVNLRVHPAFDIDEGSRIIGGSGPSAF
                     GVDEEAVPALLERAAGLRHVRIRGLHVFAASNQRDAAKLRAIHGAVLDLARRLHEAHG
                     LVLEQIDLGGGLGVPYAPEETPLDLKAFGQGLSDLMARHPWFTGELILEPGRFLAGPC
                     GVYLARVVRIKESRGTRFAILEGGINHLIRPLLTGQPFPVKAVGKGAGELSYTLAGPL
                     CTSLDRLGEARLPVLAAGDLLAFGTTGAYGLNEGMTHFLSHPVPPEVWVD"
     gene            complement(2332..3447)
                     /locus_tag="VFV26_09660"
     CDS             complement(2332..3447)
                     /locus_tag="VFV26_09660"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX4846473.1"
                     /translation="MRPASRLSLLKPSPIRAITDGTPPGAIPLGLGEPTWDLPEVARK
                     ALLREPGPCAYVPHVGLLQLRKAVAAFHGAHVDEVLVTTGSQGALFSLFQAWVEPGTK
                     VLMPDPGFVAYPALARMAGAEPVTYPLSKDRFRLDADALIRVLDATPDASAVILNLPS
                     NPTGGGGGLAALKRVAEACVARGVLLISDEVYRDLHFGSRCPSLRDVTDRGVVTSSVS
                     KGWGAPGLRVGWAVGDPAWLASARVVHGYAVTGTATPAQWAALALIEHSEAILAEARA
                     AVGERWEALAAALRDELGQTVAPPDGTFYHFMALPEAAHADPLAFCLKLRDEAKVVLI
                     PGLAFGEGGRGHARLSFAATPEQLREGVRRLAPYWKA"
     gene            complement(3619..4440)
                     /locus_tag="VFV26_09665"
     CDS             complement(3619..4440)
                     /locus_tag="VFV26_09665"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEX4846474.1"
                     /translation="MTVDIETIHRFFSRGPEALATDPEAPAMHQVLLVALETGAIRAA
                     ERLDDGTWRTNAWVKQAILCGFRRTSLAEMPGPGYPTFDKTAYPPRHFGLEDAVRLVP
                     GGSAVRRGAHIARSVVLMPPAYVNVGAFVDEGTMVDSHALVGSCAQIGKRVHLSAAAQ
                     IGGVLEPAGAQPVIVEDDAFVGGLVGLFEGIVVRRRAVLASGVVITGSTVIYDLVHGR
                     ELRQEVPEGAVVVPGSRPASGDYAKARGLQVSAPCIVKYRDDRTDAATALEQALR"
     gene            complement(4440..>5213)
                     /gene="dapA"
                     /locus_tag="VFV26_09670"
     CDS             complement(4440..>5213)
                     /gene="dapA"
                     /locus_tag="VFV26_09670"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX4846475.1"
                     /translation="PLGSTGEAATILDAERDAIISACLEEAGGRPVVVGTGHNATVQA
                     AALTKRAQALGAQGALVVTPYYNKPTPAGLVAHFAAVAEAAPGLPLIAYNVPGRTGLN
                     LTPTVLARLWENPQVVAVKESSGNLAQIAEIARQLPEGKLLLSGDDNLALASLAVGAS
                     GLVSVLGNVLPRETAILVAAARRGHAAEALRLHQQLLPLMDALFLESNPIPLKAALNL
                     LGLCGDGLRLPLIPASAATRTRLAEALCQSTEGTLPGVN"
BASE COUNT          762 a         1881 c         1879 g          691 t
ORIGIN      
        1 ccagcaggcc ctgagtctgg cccccggcca tcccgccgtg ctggagggcc tggagcgctg
       61 ccgccggccc cggtcggccc cgtcgccatc tccggcgatg gaatccatct tcgatcccca
      121 aggccgcatc gccatggtcg aagaggaacc caccctgatc atggtccaac ctgcccccgt
      181 ggagccaccg gcctccctca ccaaggcggc cccggccgcc cgcgagggcc tcagcctgcc
      241 cgaccgcttc cagggggcct ccacccgctt gccctggctg cgggagccca aggtctgggt
      301 ctgggccggg agtgccgccc tgtcgctggc cgtgggcctc tacgccctcc acacctaccg
      361 caaggaccag gaactgaagg aagccgtcaa ggccgcccgg gccgccgccg tggcccccgt
      421 gctccagcag gcccaggcgc cggatctggc ggagtccccc gcggacatcc tgcaggaggc
      481 cgaaaccgcc ctgggaacgg atccgctgca cgcctacctt cgcgtccagg cgcttctggc
      541 cctgagtccg ggggatgccg cgggcgccca gctgctggaa aaggcccgcc tcggccttcc
      601 cgggggcgtc gcgggcgcca gcctccccga gttccagaag caccttcaga acggcgatct
      661 ggaagccgcc gccaaggtca tggacgccct gctccgcgcc cagcccgatg accccggcct
      721 gcgggcccgc gccgcccgga tgcacctggc cctctgctcg gcccatgcct cccaggcccg
      781 gtggatcgaa gccgccgggg atctgcggcg gggccgggcc ctgttccccg ccgacaagac
      841 ctggcagacc cgcctccgcc tgctggaccg cgtgaagacc ctccccaggg ccgagcaggc
      901 ggcctggctg cccctgctgg ggtagggcct cataccaagc cgccaccaat gatagagatt
      961 caccacggag tcacggaagc cacggtggag gcacagaggc ctccctgttc ctccgccatg
     1021 ggcaggccga aggccgcttc cggccaggcc ggaaaccacg ggaggcgccg ggcccggatc
     1081 cttttgaggc gatccggatc cggcgcctcc cgtgtgccca tgctctggtt ctccgtggtg
     1141 gatccttaac gattgaacgc gaaaccgtat caatccaccc agacctccgg cggcacggga
     1201 tggctcagga agtgggtcat gccctcgttg agcccgtagg cccccgtggt gccgaaggcc
     1261 agcaggtccc ctgcggccag gaccggcagg cgcgcctcgc ccaggcggtc caggcttgtg
     1321 cagaggggcc ccgccagcgt gtacgagagc tcgccagccc ccttgcccac ggccttcacg
     1381 gggaagggct gccccgtgag gagcgggcgg atcaggtggt tgatgccgcc ctccaggatg
     1441 gcgaagcggg tgccgcggct ttccttgatg cgcacgaccc gggccaggta gacgccgcag
     1501 ggccccgcca ggaagcggcc tggctcgagg atcagctcgc ccgtgaacca gggatggcgg
     1561 gccatcagat cggacagtcc ctgtccaaaa gccttcagat ccaggggggt ttcctctggc
     1621 gcgtagggca cgcccagccc gccgcccagg tcgatctgct cgagcaccag accgtgggct
     1681 tcgtgaaggc gtctggccag gtccagcacg gcgccatgga tggcccgcag cttcgcggcg
     1741 tcccgctggt tgctggcggc gaagacatgc aggccgcgga tgcggacgtg gcgcaggccc
     1801 gcggccctct ccagcagcgc gggcaccgcc tcctcatcca ccccgaaggc cgaaggtccg
     1861 ctgcccccga tgatgcggct gccctcgtcg atgtcgaagg ccgggtgcac ccgcaggttc
     1921 acggcggtct cgcggtccac cagcgcatcg atccgcgcca ggtcctccca gccttccgcc
     1981 tgcacccgca cgcccatggc cagagccttc tccagctcag cctcccgctt gccgggcccc
     2041 gcgaagaagg tgcgccccat cggcaggccc agcgcctcca cccgccccag ctcgccgatg
     2101 gaggcgcagt cgaagctggc gcccagggac gcaaagcacg tcagcagatc cggatggggg
     2161 ttggccttca ccgcgtaggc gaggcgcacc cgggagggga gcacctgacg cagggccgtg
     2221 aactgctccg ccgcgaccgc ggcggagtag gcgaagcagg gcgtgccgtg gccctcggcc
     2281 agtcgctggc aggtggcgtc gtcgaaggcg aagaggtcat tcatgggcgg ctcaggcttt
     2341 ccagtagggc gccagccgcc gcacgccttc ccgcagctgc tcgggggtgg cggcgaagct
     2401 gaggcgggcg tggccgcggc ccccttcgcc gaaggcgagg ccggggatga gcaccacctt
     2461 ggcctcgtcg cggagcttca ggcagaaggc caggggatcc gcgtgggcgg cctccggcag
     2521 cgccatgaag tggtagaagg tgccgtcggg gggcgccacg gtctggccca gctcgtcgcg
     2581 cagggccgcg gccagggcct cccagcgctc gcccacggcg gcccgggcct cggccaggat
     2641 ggcctcggag tgctcgatga gcgccagggc cgcccactgc gcaggcgtgg ctgtgccggt
     2701 cacggcgtag ccatggacca cgcgggccga tgccagccag gcgggatcgc ccacggccca
     2761 gcccacccgc aggcccggcg cgccccagcc cttgctcacg gagctggtga ccacgccgcg
     2821 atcggtgaca tcccgcaggc tggggcagcg cgatccgaag tgcaggtcgc ggtagacctc
     2881 gtcggagatg agcagcacgc cccgggccac gcaggcctcc gccacgcgct tcagcgcggc
     2941 caggccgccc ccgccgcccg tggggttgga gggcaggttg aggatcaccg cggaggcatc
     3001 gggcgtggcg tccagcacgc ggatcagcgc gtccgcatcc aggcggaacc ggtccttgga
     3061 cagcgggtag gtcaccggct cggcgcccgc catgcgggcc agggccggat aggccacgaa
     3121 gcccggatcg ggcatcagca ccttcgtgcc gggctccacc caggcctgga acagggagaa
     3181 caaggcgccc tgggagccgg tggtgacgag gacttcatcg acatgggcgc catggaaggc
     3241 ggccacggcc ttgcgcagct gcagcaggcc cacgtggggc acgtaggcgc aggggccggg
     3301 ttcgcggagc agggccttcc gcgccacctc cggcaggtcc caggtgggct cgcccagccc
     3361 cagggggatg gccccgggcg gggtgccgtc cgtgatggcg cggatgggcg aaggcttcag
     3421 cagagacagg cgggaggcgg gtcgcacgga gtcctcagga aaaagatcaa aagcatatag
     3481 atcaccacca gatgttagtt tgtctcgcgt atccgcggcg cggataccga gaggacacca
     3541 agacaccaag taaagacaaa tggtttttgc agttcttggt gccttggtgc cttggtggtt
     3601 tgcatttcgt cgaaaaccct accgcagcgc ctgttccagc gccgtggcgg cgtcggtccg
     3661 gtcgtcgcgg tacttcacga tgcagggggc cgagacctgg agtccgcggg ccttcgcgta
     3721 gtcgcccgaa gcgggccgcg atcccggcac taccacggcg ccctcgggca cctcctggcg
     3781 cagttcgcgg ccatgcacca ggtcgtagat cacggtgctg cccgtgatga ccacgcccga
     3841 ggccagcacg gcccgccgcc gcaccacgat gccctcgaag aggcccacga ggccccccac
     3901 gaaggcgtcg tcctcgacga tcaccggctg ggcccccgcg ggctccagca cgccgccgat
     3961 ctgggccgcc gcggacaggt gcacgcgctt gccgatctgg gcgcagctgc ccaccagggc
     4021 gtggctgtcc accatggtcc cctcgtccac gaaggcgccc acgttcacgt aggccggggg
     4081 catgagcacc acgctgcggg cgatgtgggc gccgcggcgc acggcggaac cgccgggcac
     4141 caggcgcacg gcgtcctcca ggccgaaatg gcggggcggg taggcggtct tgtcgaaggt
     4201 gggatagccg ggtcccggca tctccgcgag gctggtgcgc cggaagccgc agaggatggc
     4261 ctgcttcacc caggcgttgg tccgccaggt gccgtcgtcc aggcgctcgg cggcgcggat
     4321 ggcgccggtc tccagggcca ccagcagcac ctggtgcatg gccggagcct cggggtccgt
     4381 ggccagggcc tccgggccgc ggctgaagaa gcggtggatg gtctcgatgt cgacggtcat
     4441 cagttcactc cgggaagggt gccttccgtg gactggcaga gcgcctcggc aagccgggtg
     4501 cgcgtggcgg ccgaggccgg gatcaggggc aggcgcagcc cgtccccaca gaggcccagc
     4561 aggttcaggg cggccttcag gggaatgggg ttgctttcga ggaagagggc gtccatcagg
     4621 ggcagcagct gctggtgcag gcgcagggcc tcggcggcat ggccccggcg ggcggcggcc
     4681 accaggatgg cggtctcccg gggcaggacg ttccccagca cggacaccag gcccgaagcg
     4741 cccacggcga gggaggccag ggccaggttg tcgtcgccgg acagcaggag cttgccctcg
     4801 ggcagctggc gggcgatctc ggcgatctgg gccaggttcc cgctgctctc cttcaccgcc
     4861 accacctggg ggttctccca gagccgggcg aggaccgtcg gcgtgaggtt gaggcccgtg
     4921 cggcccggca cgttgtaggc gatgagcggc aggcccggcg ccgcctcggc cacggccgcg
     4981 aagtgggcca ccaggccggc cggcgtgggc ttgttgtagt agggcgtcac caccagggcc
     5041 ccctgggccc ccagggcctg ggcccgcttc gtcagggccg ccgcctggac cgtggcgttg
     5101 tgtcccgtgc ccaccaccac gggccgtccc ccggcctcct cgaggcaggc cgagatgatc
     5161 gcgtcgcgct cggcatccag gatggtggcg gcctcccccg tggagccgag ggg
//
LOCUS       DASUDT010000468         2014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_927348, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000468 DASUDT010000000
VERSION     DASUDT010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927348"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..1500)
                     /gene="sufB"
                     /locus_tag="VFV26_09675"
     CDS             complement(61..1500)
                     /gene="sufB"
                     /locus_tag="VFV26_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX4846476.1"
                     /translation="MTSTFNVVTSQEYKYGFVTDIEADSVAPGLNEEVIRFISAKKGE
                     PDWLLEFRLKAYRHWLTMTEPDWAKVDYPKPDFQKIVYYSAPRAKAPKYASMDEVDPE
                     LKRTFEKLGVPIHEQEALAGVAVDVVFDSVSVTTTYKEKLKAVGIIFCSFSEAVKEYP
                     DLIKQYLGSVVPSSDNFYAALNSAVFTDGSFVFIPKGVACPMDLSTYFRINNKESGQF
                     ERTLIVAEEGASVSYLEGCTAPQFDTNQLHAAVVELVALDHASIKYSTVQNWYAGDKD
                     GVGGIFNFVTKRGICKGKASRISWTQVETGSAITWKYPSCILLGDDSIGEFYSVALTN
                     HKQQADTGTKMIHIGRNTKSTIISKGISAGDSSNSYRGLVKVQPKAEGARNFSQCDSM
                     LIGQSSSASTFPYIEVQNRSARVEHEATTSKIGEEQLLYFQQRGIPAEEAISMIINGF
                     CKDVFRELPMEFAVEATRLLSLKLEGSVG"
     gene            complement(1571..>2014)
                     /locus_tag="VFV26_09680"
     CDS             complement(1571..>2014)
                     /locus_tag="VFV26_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846477.1"
                     /translation="ARALDAFLTRHPKSTGAWEAALMREAYRLMNGQATEQDLIEVRR
                     LHTHPLPGLEPRARTLLGQYLLALKRHQDVLDLLDPLLEKEPTLINHFQLGAALAGLG
                     EREEARALLRAGLDADPGDLNDSQAKGVKTQIRGLLKELDAPPEA"
BASE COUNT          297 a          591 c          701 g          425 t
ORIGIN      
        1 acagatgaag tgaggatcag gcggctatcc gtgttgatcc gagttcatct gtggcgaatc
       61 tcatcccacg ctcccttcga gtttcaggga gagcaggcgg gtggcttcga cggcgaactc
      121 catgggcagc tcgcggaaga cgtccttgca gaagccgttg atgatcatgc tgatggcttc
      181 ctcggcgggg atgccgcgct gctggaagta gagcagctgc tcttcgccga tcttgctggt
      241 ggtggcctcg tgttccaccc gggcgctgcg gttctgcacc tcgatgtagg ggaaggtgct
      301 ggcgctgctc gactggccga tgagcatgga atcgcactgg ctgaagttgc gggcgccctc
      361 ggccttcggc tgcaccttca ccaggccgcg gtagctgttg gagctgtcgc cggcgctgat
      421 gcccttgctg atgatggtgc tcttggtgtt gcggccgatg tggatcatct tggtgccggt
      481 gtcggcctgc tgcttgtggt tggtgagggc cacgctgtag aactcgccga tgctgtcgtc
      541 gcccagcagg atgcagctgg ggtacttcca ggtgatggca ctgccggtct ccacctgggt
      601 ccagctgatg cgcgaggcct tgcctttgca gatgccgcgc ttggtgacga aattgaagat
      661 gccgcccacg ccgtccttgt cgccggcgta ccagttctgc acggtgctgt acttgatgga
      721 ggcgtgatcg agggccacca gttccaccac ggcggcgtgc agctggttgg tgtcgaactg
      781 gggcgcggtg cagccctcca ggtagctcac gctggcgcct tcctcggcca cgatgagggt
      841 gcgctcgaac tggcccgatt ccttgttgtt gatgcggaag taggtgctca ggtccatggg
      901 gcaggccacg cccttgggga tgaacacgaa gctgccgtcc gtgaacaccg cgctgttgag
      961 ggccgcgtag aagttgtcgg aggagggcac cacgctgccg aggtactgct tgatcaggtc
     1021 gggatattcc ttcaccgcct cgctgaagct gcagaagatg atgccgacgg ccttcagctt
     1081 ctccttgtag gtggtggtga cgctcacgga atcgaagacc acgtccacgg ccacgcccgc
     1141 cagagcctcc tgctcgtgga tgggcacgcc cagcttctcg aaggtgcgct tcagctccgg
     1201 gtccacctcg tccatggagg cgtatttggg ggccttggcc cggggggcgc tgtagtagac
     1261 gatcttctgg aagtcgggct tcgggtagtc caccttggcc cagtccggct cggtcatggt
     1321 cagccagtgg cggtaggcct tgaggcggaa ttccagcagc cagtcgggtt cgcccttttt
     1381 cgccgagatg aagcggatga cctcttcgtt caggccgggc gcgacactat ccgcctcgat
     1441 gtccgtcacg aagccgtact tgtattcctg gctggtgacc acattgaagg ttgaggtcat
     1501 acaccactcc cgagacgttc cattctggaa tctcgactaa aattgtcaac ttaataagct
     1561 gtggccctgg tcacgcttcc gggggcgcat ccaattcctt gagcaggccc cggatctggg
     1621 ttttcacgcc cttggcctgg gaatcgttga ggtcgccggg atcggcgtcc agcccggccc
     1681 gcagcagggc ccgggcctcc tcccgctcgc ccaggcccgc cagggcggcg cccagctgga
     1741 agtggttgat gagggtgggc tctttttcca ggagggggtc cagcaggtcc agcacgtcct
     1801 ggtggcgctt gagggccagg aggtactggc ccagcagggt gcgcgcccgg ggctcgaggc
     1861 ccggcagggg gtgggtgtgg aggcggcgga cttcgatgag gtcctgctcc gtggcctggc
     1921 cgttcatgag gcggtaggcc tcgcgcatga gggcggcctc ccaggccccg gtgctcttgg
     1981 ggtgccgggt gaggaaggcg tccagggccc gggc
//
LOCUS       DASUDT010000469         3119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_264499, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000469 DASUDT010000000
VERSION     DASUDT010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264499"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VFV26_09685"
     CDS             <1..693
                     /locus_tag="VFV26_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846478.1"
                     /translation="GRDLGLGFRLEGRGDLEYDGYSEGDDRYRTPGYVLPPSGLTRMG
                     TLQGSWLFRGFQLRAYHGWGQRPEGVYGTAAAPLAVPENGDFRRWGGSLGLDREVSPG
                     FWFHGEAGWASGRAFDRFKALDVGGMGGAVSIAGIRSNAISADRVAYAKASMAIPTGP
                     SLRLSLSLEHARARSLDDQKTYGMSGVGITGDLPGFWLFTAVRVDLGVGVQSDIDGVK
                     AVNGYVALLRVF"
     gene            924..1976
                     /locus_tag="VFV26_09690"
     CDS             924..1976
                     /locus_tag="VFV26_09690"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEX4846479.1"
                     /translation="MNVRLVDGPIAGYQEINVNIQSVEISGNGGWITLGTPNKTLNLL
                     DLVGGVSETLAMGATLPAGHYQQMRLVLGSGNTVKLADGTLHGLTVPSGLQSGIKLIV
                     SFDVAAGTTKDVWIDFDAARSIQVVQAGASGQYILRPTVRAYDKVATGSISGILSDAA
                     TASGLAGVMVYAETLDGAGNAIISRSTVTDANGAYTLDLLPVGSTYHVVSQPLTGTTT
                     LKAYDAKASDGFALSAAMPVFTYSAAFTASAATGGISGGLTPMAASNQSDQVHLLQSL
                     ATASGSRSFIVRTAMATMGASTETYGFANVPVGAYTTQAVRTTLNPDGTSTRSTSAAT
                     AATVAAGLTLTVNLSL"
     gene            complement(2008..>3119)
                     /locus_tag="VFV26_09695"
     CDS             complement(2008..>3119)
                     /locus_tag="VFV26_09695"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX4846480.1"
                     /translation="ASTIASRFHYTIGDQQIPGIPPLPPLPVVPWHQGDHPFTLDYAT
                     IRELLPSAFAIAMLGAIESLMSAVVADGMSGSTHDPNSELIALGIANIVCPFFGGIAA
                     TGALARTATNIRAGARSPFAAAMHSVFVLACTIALAPLVSYLPMAALAALLIIVARNM
                     SEARHFFRLARIAPKHDVIVMMTCFILTVVFDMVIAVTVGIMLASLLFMRRMAGLSGG
                     RLTHPDHRALPGPLPEGVVIYDLAGPLFFGAAERAMNAMRAIGAEVRVVIFRMEQVPS
                     ADVTGLVAMEGVLREMARQGIKAIFVGLHGQAREVFERGGIREKAGELAVCDTMVEAF
                     HVMDAKLHTYHRSGLGPIRFQILHREKAKIRKAPK"
BASE COUNT          492 a         1059 c         1079 g          489 t
ORIGIN      
        1 ggccgggacc tgggcctggg tttccgcctg gagggccggg gcgacctcga atacgacggc
       61 tacagcgaag gcgatgacag gtaccgcacc ccgggctatg tcctgccgcc ctcggggctc
      121 acccgcatgg gcaccctcca gggctcctgg ctgttccggg gcttccagct gcgggcctac
      181 cacggctggg gccagcgccc cgaaggcgtc tacggcaccg cggcggcccc gttggccgtg
      241 cccgagaacg gggacttccg ccgctggggc ggcagcctcg gcctcgatcg cgaggtgagc
      301 cccggcttct ggttccacgg ggaggcgggt tgggcctccg gcagggcctt cgaccgcttc
      361 aaggccctgg acgtgggggg catgggcggc gccgtcagca tcgcgggcat ccggtccaac
      421 gccatctccg cggaccgtgt ggcctacgcc aaggcctcca tggccattcc cacggggccc
      481 agcctgcgcc tgtccctcag cctcgaacac gcccgcgccc gcagcctgga cgatcagaag
      541 acctacggga tgagcggggt cggcatcacc ggcgatctgc cgggcttctg gctcttcact
      601 gccgtgcggg tggacctggg tgtgggggtg caaagcgata tcgacggggt gaaggccgtg
      661 aatgggtacg tggcgctgct tcgggtgttc taggcagcct agatacaaag atctatgtat
      721 ttatatgatt gattttatat gtcgtctttt ccgttgcgca gcccgtcctg gcggcggaag
      781 atgtctgtcc tgacgcctgc tttctgggcg atggttcgga ggtggacatg ttgaattggc
      841 gcacaccttt ttcgttggcg gcgagtctgg gcctcgccct cctgatggcc tgcggcggct
      901 ccgattccgg gggcagtgga cgcatgaacg tgcgtctggt ggacggcccc atcgccggct
      961 accaggagat caatgtgaac atccagtccg tggagatcag cggcaatggc ggctggatca
     1021 ccctcggaac gcccaacaag accctcaacc tgctggacct cgtgggcggc gtgagcgaga
     1081 ccctcgccat gggggccacg ctgccggcgg gccactacca gcagatgcgc ctggtgctgg
     1141 gatccggcaa caccgtgaaa ctggcggatg gcaccctgca tggcctgacc gtgccctcgg
     1201 ggctccagag cggcatcaag ctgatcgtga gcttcgacgt ggcggcgggc accacgaagg
     1261 acgtgtggat cgacttcgat gcggcccgct ccatccaggt ggtgcaggcc ggagcctcgg
     1321 gccagtacat cctccggccc acggtccggg cctacgacaa ggtggccacg ggttccatct
     1381 ccgggatcct cagcgatgcc gcgacggcca gcggtctggc gggcgtcatg gtctacgccg
     1441 agaccctcga tggcgcgggc aatgccatca tctcgcgcag cacggtgacg gacgccaacg
     1501 gtgcctacac cctggacctg ctccccgtgg ggtccaccta ccacgtggtg agccagcccc
     1561 tgaccggcac cacgaccctg aaggcctatg acgccaaggc cagcgatggc ttcgccctga
     1621 gcgccgccat gccggtgttc acctacagcg ccgcgttcac ggccagtgcc gccacgggcg
     1681 gcatctccgg tggcctcacg cccatggccg ccagcaacca gagcgaccag gtccacctgc
     1741 tgcagtcgct ggccaccgct tctggaagcc gcagcttcat cgtgcggacg gccatggcca
     1801 ccatgggcgc ctccacggaa acctacgggt tcgccaatgt gccggtcggc gcctacacca
     1861 cccaggcggt gcgcaccaca ctgaaccccg atggcaccag cacccggtcc acgtcggccg
     1921 ccaccgccgc caccgtggcc gcgggcctca ccctgaccgt gaacctgagc ctctgagcct
     1981 cggccgtcca gagatccgga agaccctcta cttcggggcc ttccggatct tcgccttctc
     2041 ccggtgcagg atctggaagc ggatgggccc gaggccggag cggtggtagg tgtggagctt
     2101 ggcgtccatc acgtggaagg cctcgaccat ggtgtcgcag acggccagct cgccggcctt
     2161 ctcccggatg ccgccccgct cgaacacctc ccgcgcctgg ccgtggagcc ccacgaagat
     2221 ggccttgatg ccctgccgcg ccatttcgcg caggacgccc tccatggcca cgagccccgt
     2281 cacatccgcg ctgggcacct gctccatgcg gaagatgacc acccggacct cggcgccgat
     2341 ggcccgcatg gcgttcatgg cccgctcggc ggccccgaag aagaggggcc ccgccagatc
     2401 gtagatgacc acgccttcgg gcaggggccc cggcagggcg cggtggtccg gatgggtgag
     2461 ccggcccccg gacaggccgg ccatgcgtcg catgaagagc agcgaggcca gcatgatgcc
     2521 gacggtgacg gcgatgacca tgtcgaagac gacggtcagg atgaagcacg tcatcatgac
     2581 gatgacgtcg tgcttcggcg cgatgcgcgc gaggcggaag aagtggcgcg cctcggacat
     2641 gttgcgcgcg acgatgatga gcaacgcggc gagtgccgcc atcggtaagt acgagacgag
     2701 cggtgcgagt gcgatcgtgc acgcgagtac gaagaccgag tgcatggccg cggcgaacgg
     2761 cgagcgcgcg cctgcgcgga tgttcgtggc ggtgcgcgcg agggcgcccg tcgcggcgat
     2821 gccgccgaag aacgggcaca cgatgttcgc gatgccgagc gcgatcagct cggagttcgg
     2881 atcgtgcgtg ctgccgctca tgccgtcggc gacgaccgcg gacatcagcg actcgatcgc
     2941 gccgagcatc gcgatcgcga acgccgacgg cagcagctcg cggatcgtcg cgtagtcgag
     3001 cgtgaacggg tgatcgccct ggtgccacgg caccacgggg agcggcggca gcggcgggat
     3061 gcccgggatc tgctggtcgc cgatcgtgta gtggaaccgc gacgcgatcg tgctcgcgt
//
LOCUS       DASUDT010000470         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_396914, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000470 DASUDT010000000
VERSION     DASUDT010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396914"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VFV26_09700"
     CDS             <1..572
                     /locus_tag="VFV26_09700"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4846481.1"
                     /translation="GKVPVALSDCDAAVFSGHKVGGPRGAALLWMRPGLPWEALMEGP
                     QERRRRGGTEDLPAILGLAAAVRHLTERQSLNAALAAVRDAFETEVTSWGRGIEVIGQ
                     EAPRLPNTSCVLFRGRNGEALHAALDLAGFAVSTGSACHSGAVKPSHAITTLGYGLDD
                     ARSVLRFSMLPDVQTSEVEALAAAIKRLT"
     gene            605..2287
                     /locus_tag="VFV26_09705"
     CDS             605..2287
                     /locus_tag="VFV26_09705"
                     /inference="COORDINATES: protein motif:HMM:NF018530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine exchanger family transporter"
                     /protein_id="HEX4846482.1"
                     /translation="MLENILFFFAHNPLLMLFAVVALGYPISKIRIAGASFGIASILF
                     AGIALGALVMAPGLDPGLKKDISKEMKLVYELGLAVFVYGMGLSISHSFWAAFSREGM
                     KKNAVVLLVMLASTAFVVVLAKAMGFNARYASGLLTGSFTNMPALAGVIERVKSLGAG
                     PVELAQPTVASAIAYPIGVLVPMLIILVSSKVFRVDLRAEADGLKDYQAGHQKLEVWT
                     VRVTKPEAESLTKREIRAAGRFQVVFGRVLRKAELLLPGPEFRLKLDDLVTVVGSPDD
                     LAQVQALIGERSHVELDRDQSALDATRVFVSHPDVVGVPLGKLDLVNRHQAIITRVRR
                     GDLWFVPDGDTVLELGDRVRVTTRRDNIEAIEAFFGDSYRDLSEVSFLTFAMGLAAGL
                     ALGQLPIPLGHGIVFKLGFAGGPLAVALVLGRFHRIGPLVWNFPYSANHTIRQFGLVL
                     FAAGIGVISGEGFRAIVSKDASVLPLFLGAAFLVCFVADSLTMLLGHKLFGIPLNIMF
                     GILAGTHTQPVVLGYANHHTGNDLPNVGFATVYPLATILKIVLAQVLLVLIP"
BASE COUNT          329 a          814 c          795 g          405 t
ORIGIN      
        1 ggggcaaggt gcccgtggct ctctcggact gcgatgccgc ggtgttcagc ggccacaagg
       61 tgggcggtcc ccggggggcc gccctgctgt ggatgaggcc gggcctgccc tgggaggccc
      121 tgatggaggg cccgcaggag cgccgccgcc gcggcggcac cgaggatctg ccggccatcc
      181 tgggcctggc ggcggccgtg cgccatttga cggaacgtca aagcctgaac gctgcgctgg
      241 cggcggtgcg cgatgcattc gagaccgaag tcacatcctg gggccgcggc atcgaggtca
      301 tcggccagga ggcgccacgc ctgcccaata ccagctgtgt cctgttccgg ggccgcaacg
      361 gcgaggcttt gcacgccgcc ctggacctgg ccggcttcgc cgtcagcacc ggcagcgcct
      421 gccacagcgg ggcggtgaaa cccagccacg cgatcacgac cctgggatat ggtttggacg
      481 acgcccgatc ggtgcttcgc ttttcgatgc tccccgacgt gcagaccagc gaggtggaag
      541 ccctggcggc ggccatcaag cgattgacat gaccccctga tttcccggcc gcgtggaggg
      601 acccttgctc gagaacatcc tcttcttctt cgcgcacaat ccgctcctga tgctcttcgc
      661 ggtggtggcc ctgggctacc ccatcagcaa gatccgcatc gcgggggcct ccttcggcat
      721 cgccagcatc ctcttcgccg gcatcgccct gggggcgctg gtcatggcgc cgggcctgga
      781 ccccgggctc aagaaggaca tctccaagga gatgaagctg gtctacgagc tgggcctggc
      841 ggtgttcgtc tacggcatgg gcctctccat ctcccacagc ttctgggccg ccttcagccg
      901 cgagggcatg aagaagaacg ccgtggtcct cctggtgatg ctcgcctcca cggccttcgt
      961 ggtggtgctg gccaaggcca tgggcttcaa cgcccgctac gcgtcgggcc tgctcacggg
     1021 cagcttcacc aacatgcccg ccctggcggg cgtcatcgag cgcgtgaagt cgctgggggc
     1081 gggccccgtg gaactggccc agcccaccgt ggcctcggcc atcgcctatc ccatcggcgt
     1141 gctggtgccc atgctgatca tcctcgtcag ctcgaaggtc ttccgcgtgg acctgcgggc
     1201 ggaggcggac ggcctcaagg actaccaggc gggccaccag aagctggagg tctggacggt
     1261 gcgggtgacg aagcccgagg ccgaatccct gaccaagcgg gagatccgcg ccgcgggccg
     1321 cttccaggtg gtcttcgggc gggtgctgcg caaggcggaa ctgctgctgc cggggccgga
     1381 attccgcctg aaattggacg acctcgtgac ggtggtgggc tcgccggacg acctggccca
     1441 ggtgcaggcc ctcatcgggg agcgcagcca tgtggaactg gatcgcgatc agagtgccct
     1501 ggatgccacc cgggtcttcg tgtcgcaccc ggatgtggtg ggcgtccccc tcggcaagct
     1561 cgatctggtg aaccggcacc aggccatcat cacccgcgtc cgccggggcg atctctggtt
     1621 cgtgccggat ggcgacacgg tgctggagct gggcgaccgg gtgcgcgtca ccacccgccg
     1681 ggacaacatc gaagccatcg aggcgttctt cggggacagc taccgcgacc tcagcgaggt
     1741 gagcttcctc accttcgcca tgggcctggc ggcggggctg gccctgggcc agctgcccat
     1801 ccccctgggt cacggcatcg tcttcaagct gggcttcgcg gggggccccc tggcggtggc
     1861 gctcgtcctg ggccgcttcc accgcatcgg ccccctggtg tggaacttcc cctacagcgc
     1921 caaccacacc atccgccagt tcggcctggt gctgttcgcc gcgggcatcg gcgtgatctc
     1981 cggcgaaggc ttccgggcca tcgtgtcgaa ggacgcctcc gtgctgccct tgttcctggg
     2041 cgcggccttc ctggtctgct tcgtggcgga ttccctgacc atgctgctgg gccacaagct
     2101 gttcggcatc ccgctcaaca tcatgttcgg catcctggcg ggcacccaca cgcagcccgt
     2161 ggtgctgggt tacgccaacc accacaccgg caacgacctg cccaacgtgg ggttcgccac
     2221 ggtctatccg ctggccacca tcctcaagat cgtcctggcc caggtgctgc tggtgctgat
     2281 cccgtagggg ttcagcgtcc gggaagcagc ctgtccaaag gccgcccgtc tggagcctgg
     2341 gcc
//
LOCUS       DASUDT010000471         2877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_1965622, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000471 DASUDT010000000
VERSION     DASUDT010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1965622"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VFV26_09710"
     CDS             <1..361
                     /locus_tag="VFV26_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4846483.1"
                     /translation="PEDRWWHILAPPIGALASQAAGRLGGYDPADTDLLRRTDGLRFA
                     TPSLCFLATQDRLAPPQVQRTLAARFRSGRVIEVPTWHLHCAEVLGPAYAQAIQEATS
                     RWFPDTKRGPGGPPADT"
     gene            complement(374..1114)
                     /locus_tag="VFV26_09715"
     CDS             complement(374..1114)
                     /locus_tag="VFV26_09715"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEX4846484.1"
                     /translation="MRFRKLLLALLAAFAVATPALAQKKMSKEERAKLPRIAILEFKA
                     APDAWHGWRHGGWGNQMGTISNQLRDLFTTEIMEKGRNKIRVVERERLSEIREELNFQ
                     QSGEVDTATVQKIGKLLGVKYVMTGKVTRFAYKEGGFATGWGVGALVSKVTGDGMAGA
                     VAGSVNVKKASFTGRLDIRLIEVETGEILGAWKEEDKVSDTSVKVAGTGAEVQYDEEL
                     VNKVFEPIVQRITPKLLRATVAANEDEE"
     gene            complement(1144..1431)
                     /locus_tag="VFV26_09720"
     CDS             complement(1144..1431)
                     /locus_tag="VFV26_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX4846485.1"
                     /translation="METLTKADLSRHLMERLELGKKDADLLVNTFLESIIESLKTGEG
                     VELRGFGSFRLRDRRARQGRNPRSGESIQVPPKRVVYFKLGKELRSKLIDE"
     gene            complement(1587..>2877)
                     /locus_tag="VFV26_09725"
     CDS             complement(1587..>2877)
                     /locus_tag="VFV26_09725"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002073.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX4846486.1"
                     /translation="PNGVKESRWMVLVGLGDEEKVTLNKIRKAVGTAGRFCLKKKWKK
                     IGVLSPSTSTLDHDAVQVAVAEGALLANYDLVAFKGGKQEPKQFASVEIFTNGDDTRK
                     ARRKLPVIEAGVAACHRVRDLANTPAGDLYPEVFADMAVKLAKQHKLHCEVLDVPALE
                     KGGFRSVLAVGQGSARPPRVVKLEYKPKEKPKKHVVLVGKGVCFDSGGLSLKDGSSME
                     TMKDDMTGAAIVLATLAACAQLEVPVQVTGLMGLVENMPSGTSYKPGDVLRSRSGKTI
                     EVLNTDAEGRLVLADLLHYAGELGADHVVDLATLTGAALVAMGDGVSAVMGTDQKLVD
                     RLLDSGNAVGEYLWQLPLVEEYAELLKSPLADLKNITGIRWGGTITAGLFLREFVDGA
                     SWAHVDLSGGWSGKERDYRTHGGSGEGPRFLLEWLMD"
BASE COUNT          448 a         1016 c          893 g          520 t
ORIGIN      
        1 ccccgaggac cgctggtggc atatcctcgc gccacccatc ggggccctgg ccagccaggc
       61 ggcgggccgc ctgggcggct acgaccccgc ggacaccgat ctgctgcggc ggaccgacgg
      121 cctccgcttc gccacgccca gcctctgctt cctggccacc caggaccggc tggcccctcc
      181 acaggtccag cggaccctgg cggcccggtt ccgttcgggc cgggtgatcg aagtgccgac
      241 ctggcacctg cactgcgccg aggttctggg cccggcctat gcccaagcca tccaggaggc
      301 cacaagccgc tggttcccag acacgaagag gggccccgga gggccccccg ccgatacctg
      361 aatcaacccg ggcctattct tcgtcctcgt tggccgcgac ggtggcccgc aggagcttgg
      421 gcgtgatgcg ctggacgatg ggttcgaaga ccttgttcac cagttcctcg tcgtactgga
      481 cctcggcgcc agtgcccgcc accttcacgc tggtgtcgga aaccttgtcc tcttccttcc
      541 aggcgcccag gatctcgcca gtctccacct cgatgaggcg gatatccagg cggcctgtga
      601 aggaagcctt cttgacattc acgctgcccg ccacggcgcc ggccatgccg tcgcccgtga
      661 ccttgctcac cagggcaccc acaccccagc ccgtggcgaa tccgccctcc ttgtaggcga
      721 agcgggtgac cttgccggtc atgacgtact tcacgcccag cagcttgccg atcttctgca
      781 ccgtggccgt atccacctcg ccgctctgct ggaagttcag ctcctcgcgg atctccgata
      841 accgttcgcg ctcgacgact cggatcttgt tccgcccctt ctccatgatc tcggttgtga
      901 agagatcccg gagctggttg gagatggtgc ccatctggtt gccccacccg ccgtggcgcc
      961 agccatgcca tgcatccggc gcggccttga actcgagaat ggcgatgcgc gggagcttcg
     1021 ccctctcctc cttggacatc ttcttctggg cgagggccgg tgttgcaaca gcgaaggcgg
     1081 ccagcagggc caggagcagc ttgcggaaac gcatgagaac tccctgggtg gtgggttgaa
     1141 cggctattcg tcgatcagct tgctgcgaag ttccttgccc agcttgaaat agaccacccg
     1201 cttggggggg acctggatgc tttcgccact gcggggattg cgcccctggc gggcgcgccg
     1261 gtcccgcagg cggaagctcc cgaacccgcg gagttccacg ccctcaccgg tcttgaggga
     1321 ctcgatgatg ctctccagga aggtgttcac caggagatcc gcatccttct tccctagttc
     1381 gagccgctcc atcaggtgcc gggagaggtc agccttggtg agggtctcca tcgcttccat
     1441 gggaactcca aaggggtggg ggctcggtgc attgagggca gtcctcaata aatccccatc
     1501 cgtgccctga ggtcaagagg gatatcccca tccatttgaa aaaaaggggg gcaggcgccc
     1561 ccctttgatc cggaccggca ggtccctcaa tccatgagcc actccaggag gaaccggggc
     1621 ccttctccac tgccgccgtg ggtgcggtag tcccgttcct tgcccgacca gccgccggag
     1681 aggtccacat gggcccagga ggcgccatcc acgaactcgc ggaggaagag cccggcggtg
     1741 atggtgccgc cccagcggat gcccgtgatg ttcttcaggt ccgcgagggg gctcttcagc
     1801 agctcggcgt attcctccac caggggcagc tgccagaggt actcgcccac ggcatttccc
     1861 gaatccagca gccggtccac cagcttctgg tcggtgccca tgaccgccga gaccccatcg
     1921 cccatggcca ccagggccgc ccccgtgagg gtggccaggt ccaccacgtg gtcggcaccc
     1981 agctctccgg cgtagtggag caggtccgcc agcaccagcc gcccctcggc gtccgtgttg
     2041 agcacctcga tggtcttgcc gctgcggctg cggaggacgt caccgggctt gtagctggtg
     2101 cccgaaggca tgttctccac caggcccatg agccccgtca cctgcacggg gacctccagc
     2161 tgggcgcagg cggccagggt ggccagcacg atggccgccc cggtcatgtc gtccttcatg
     2221 gtctccatgc tggagccgtc cttcagggac aggccccccg agtcgaagca gacgcccttg
     2281 cccacgagca ccacatgctt cttgggcttc tccttgggct tgtactcgag cttcaccacc
     2341 cggggcggcc gggcgctgcc ctggcccacg gcgagaacag aacggaagcc acctttctca
     2401 agggccggca catccagcac ctcgcagtgg agcttgtgct gcttggccag cttcacggcc
     2461 atgtcggcga acacttccgg atagagatcg cccgcggggg tgttggccag gtcgcggacg
     2521 cgatggcagg cggccacgcc ggcttcgatg acaggcagct tgcgccgcgc cttccgcgta
     2581 tcgtcgccat tggtgaagat ctcgacggag gcgaactgct tcggctcctg cttcccgccc
     2641 ttgaaggcca ccaggtcgta gttcgccagc agcgcgccct cggccaccgc cacctgcacg
     2701 gcatcgtggt ccagggtgga ggtggaaggc gacagaacgc cgatcttctt ccacttcttc
     2761 ttgaggcaga agcggccagc ggtacccacg gccttgcgga tcttgttgag cgtcaccttc
     2821 tcttcgtcgc cgaggccgac cagaaccatc cagcggctct ccttcacgcc attgggg
//
LOCUS       DASUDT010000472         2722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_728855, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000472 DASUDT010000000
VERSION     DASUDT010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728855"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /locus_tag="VFV26_09730"
     CDS             complement(<1..479)
                     /locus_tag="VFV26_09730"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX4846487.1"
                     /translation="MNLKETGILARIRDLLPGGGGLTDDCGALPPTPAGQTLLVTTDL
                     MESGQHFRLDWHPPDLLARKLLMANLSDLDASGARPFGYTLTLALGPEIDGPWLDRFL
                     EGLASASRETGVQVLGGDTVGRPAGLGLGLTAFGFAARWLRRDGLEPGDRIYVDQRPG
                     "
     gene            613..867
                     /locus_tag="VFV26_09735"
     CDS             613..867
                     /locus_tag="VFV26_09735"
                     /inference="COORDINATES: protein motif:HMM:NF024851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEX4846488.1"
                     /translation="MAITKVWIEEGCIVCNACEAECPDVFHVTDTSCNINGSVREDGQ
                     DTENRDEMSPLSGSFGTDLEAAIEAAAAGCPVEVIKFEKA"
     gene            complement(960..1421)
                     /locus_tag="VFV26_09740"
     CDS             complement(960..1421)
                     /locus_tag="VFV26_09740"
                     /inference="COORDINATES: protein motif:HMM:NF025070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HEX4846489.1"
                     /translation="MNVAFINPFIEATLRSLEMMAGLTAEKTGLAVKEDLITTYDISA
                     IIGITGDTSGSIILSFPAPLACRIASNMLMEEIADLNQSVEDAVGEIGNIVVGDARRL
                     LIQDGFSLSISVPTVVVGKGHKISRSGDVPCIAIPFKTPFGEFEVNVGLKE"
     gene            1469..1987
                     /locus_tag="VFV26_09745"
     CDS             1469..1987
                     /locus_tag="VFV26_09745"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX4846490.1"
                     /translation="MGMISGGELGGNCVTMGVSQEVPVLVRLQADLKTAMLARDAART
                     GVLRMALAAYKNEAVAKGLSPQGTLDEADALAVLKRLVKSREDSIAQFEKVGQADRAA
                     QERAEIEILKPYLPALIEGPALEAAVKAAIAQSGATAKKDMGLVMKALQAAHGGAFDG
                     KAASSLVQGLLA"
     gene            2177..>2722
                     /locus_tag="VFV26_09750"
     CDS             2177..>2722
                     /locus_tag="VFV26_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl--tRNA ligase-related protein"
                     /protein_id="HEX4846491.1"
                     /translation="MKQSKLLIQTLRETPRDADVVSQQLMMRAGMIQKVAAGIYSYLP
                     LAFRSIRKFEEIVREELAKDGCQELLMPAVLPAELWQESGRWKFYGDELLRFCDRKAK
                     AELAERRARGEKPDEREFYNFCLGPTHEEVITDIVRKNVRSYKQLPMNLFQIQTKFRD
                     ERRPRFGLMRGREFTMKDGYSF"
BASE COUNT          470 a          874 c          944 g          434 t
ORIGIN      
        1 ccgggccgct ggtccacgta gatccggtcg ccgggctcca gcccgtcccg tcggagccag
       61 cgggcggcga agccgaaggc ggtgagtccg agccccaggc ccgcgggccg gcccaccgta
      121 tcgccgccca gcacttggac gcccgtttcg cgggaggccg aagccaggcc ttccaggaag
      181 cggtccagcc aggggccgtc gatctccggg cccagggcca gggtgagggt gtagccgaag
      241 ggccgggcgc cggaggcgtc gagatccgac aggttcgcca tcaggagctt gcgggccaac
      301 aggtccggcg gatgccagtc caggcggaag tgctggccgg attccatgag gtccgtggtg
      361 accagcagcg tctgccccgc gggggtgggg ggcagggcgc cgcagtcgtc cgtgaggccg
      421 cccccgccgg gcagcaggtc ccggatccgg gcaagaattc ccgtctcctt caggttcatg
      481 ggcggatctc cgtcacaagt ccagtctccc acgccccagg gggccagggg gtgcttggtc
      541 cgcggccccc ggaatgctag gttggttggg ttcgcccatc gccgggccca agagaatctt
      601 caggagacga ccatggccat taccaaagtc tggatcgaag aaggctgcat cgtgtgcaat
      661 gcctgcgagg ccgagtgccc cgacgtgttc cacgtcaccg acaccagctg caacatcaac
      721 ggctcggtcc gcgaggatgg ccaggacacc gagaaccgcg acgagatgag ccccctctcc
      781 ggcagcttcg gcaccgacct ggaggccgcc atcgaggccg ccgccgctgg ctgccccgtg
      841 gaagtcatca agttcgagaa ggcctaggca ctgctgaaac ggcttcgccg tttcagatcg
      901 aaaagggcgc cttgggcgcc cttttcgcat tcaggaaggc cggttggaac cggggacgac
      961 tactccttca ggcccacgtt gacttcgaac tcgccgaagg gggtcttgaa ggggatggcg
     1021 atgcagggga catcgccgct gcggctgatc ttgtggccct tgcccaccac caccgtgggc
     1081 acggagatgg agaggctgaa gccgtcctgg atgagcaggc ggcgggcgtc gcccaccacg
     1141 atgttgccga tctcgccgac ggcatcctcc acgctctggt tgaggtccgc gatctcctcc
     1201 atgagcatgt tgctggcgat tcggcaggcc aggggcgcgg ggaagctgag gatgatggac
     1261 ccggaggtgt ctccggtgat gcctatgatg gcggagatgt cgtaggtggt gatgaggtcc
     1321 tctttcacgg ccagacccgt cttctccgcc gtgagcccgg ccatcatctc caggctgcgg
     1381 agggtggctt cgatgaaggg attgatgaag gcgacgttca tggggccccg tccgtgcaag
     1441 acatgacctc atttcggccg gggcctccat gggcatgatt tctggcggag agctgggcgg
     1501 gaactgcgtc accatggggg tttcccagga ggtccccgtg ctcgtccgtc tgcaggctga
     1561 tctgaaaacc gccatgctgg cccgggatgc ggcccggacc ggggtgctgc gcatggccct
     1621 ggccgcctac aagaacgagg ccgtggccaa ggggttgagc ccccagggca ccctggacga
     1681 ggccgatgcc ctggccgtcc tcaagcgcct ggtgaagtcc cgggaggaca gcatcgccca
     1741 gttcgagaag gtgggccagg cggaccgggc cgcgcaggag cgggcggaaa tcgagatcct
     1801 gaagccctac ctgcccgcct tgatcgaagg cccggccctg gaggcggccg tgaaggccgc
     1861 catcgcccag agcggcgcca cggccaaaaa ggacatgggc ctggtcatga aggccctgca
     1921 ggcggcccac ggcggagcct tcgacggcaa ggccgccagc tcgctggtgc agggcctgct
     1981 ggcctgaaac cgcgaatgac gcgaatgggc gcgaataact gatctagatg cgctcggaag
     2041 cccagtggcc cctttccgtc ctggggtttc cttttcattc gcgtgcccga agggcgattc
     2101 gtgccattcg cggttggctt ttcatctcgc gggattaggc ctgggcctgg gttagactaa
     2161 aaagttcgag gcccccatga agcagtcgaa gctcctgatc cagaccctgc gcgagacgcc
     2221 gcgcgatgcc gacgtggtga gccagcagct catgatgcgc gccggcatga tccagaaggt
     2281 ggccgcgggc atctacagct acctgccgct ggccttccgg agcatccgca agttcgagga
     2341 gatcgtccgc gaggaactgg ccaaggacgg ctgccaggaa ctgctcatgc ccgcggtgct
     2401 gcccgcggag ctgtggcagg agagcggccg ctggaagttc tacggcgacg agctgctgcg
     2461 cttctgcgac cgcaaggcca aggccgagct ggccgagcgc cgggcccggg gcgagaagcc
     2521 cgacgagcgc gagttctaca acttctgcct ggggcccacc cacgaggaag tgatcaccga
     2581 catcgtccgc aagaacgtgc gcagctacaa gcagctgccc atgaacctct tccagatcca
     2641 gaccaagttc cgcgatgagc gccgcccccg cttcggcctc atgcggggcc gcgagttcac
     2701 catgaaggac ggctattcct tc
//
LOCUS       DASUDT010000473         3774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Geothrix sp. isolate SMAG_U1333 k141_596221, whole
            genome shotgun sequence.
ACCESSION   DASUDT010000473 DASUDT010000000
VERSION     DASUDT010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37961486
            Sequence Read Archive: SRR25158408
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Geothrix sp. (soil metagenome)
  ORGANISM  Geothrix sp.
            Bacteria; Acidobacteriota; Holophagae; Holophagales; Holophagaceae;
            Geothrix.
REFERENCE   1  (bases 1 to 3774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/11/2024 04:58:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,954
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,931
            CDSs (with protein)               :: 1,931
            Genes (RNA)                       :: 22
            tRNAs                             :: 21
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 0 of 1
            Pseudo Genes (incomplete)         :: 1 of 1
            Pseudo Genes (internal stop)      :: 1 of 1
            Pseudo Genes (multiple problems)  :: 1 of 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3774
                     /organism="Geothrix sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596221"
                     /isolate="SMAG_U1333"
                     /isolation_source="soil"
                     /db_xref="taxon:1962974"
                     /environmental_sample
                     /country="China"
                     /lat_lon="28.61222222 N 115.8344444 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /locus_tag="VFV26_09755"
     CDS             <1..887
                     /locus_tag="VFV26_09755"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4846492.1"
                     /translation="MTWGNAEADLEMMHQMARGEGFGKIAGLGVKKMKEHFIKNGWGD
                     PQLINDIGMENKGLEYSQYMSKESLAQQGGYALTNKGPQHDEAWLIFMDMVNKQLPTF
                     EDKAEALYYFPLFRTWFGLNGFCKLPWNDVVPADNASHPEPHKVPEHVQNYVDLFSAT
                     TGIQITKEDLIVQSAKVYNFQRVFNIRMGKGLRLHDAAPYRSLGPVTKEEYESRAERY
                     DQQIVTEMGLDPAGKSTEEKMALHREWRTGRFSKLMDSVYTRRGWTLDGVPTLARLKE
                     LGLDAFPEVVEVVKQHLG"
     gene            938..1135
                     /gene="thiS"
                     /locus_tag="VFV26_09760"
     CDS             938..1135
                     /gene="thiS"
                     /locus_tag="VFV26_09760"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEX4846493.1"
                     /translation="MILVNEDPLDWHVGMTVRDVLRAKNYRFPMLVIHLNDVLVQKKD
                     YDTTAIPDEAVLKVIHLISGG"
     gene            complement(1069..2700)
                     /locus_tag="VFV26_09765"
     CDS             complement(1069..2700)
                     /locus_tag="VFV26_09765"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4846494.1"
                     /translation="MQEVLKSLGISEVNPGGFAGAWTGSGKAQAVASPIDGSALATVM
                     NVTPQEFDAILARSHAAFASWKLVPAPKRGEVVKALGDELRRNKAALAELVTLEMGKT
                     LREGLGEVQEMIDICDFAVGLSRQLYGLTMPSERRMHRLQEQWHPLGVVGVITAFNFP
                     VAVWSWNTALALVCGDTVLWKPSSKTPLTAIACTKIAEKVLRDFGYDPAICSLAIGKG
                     SDIGDLINTDPRVALVSYTGSVPGGRHVGKLVQERFGRHILELGGNGAVIVSEKGDLD
                     IALRSVYFGAIGTSGQRCTSTRRVIVHESIYGTFRDRLLDLYRRTPIGDPREDEILMG
                     PLVDAGAVETMLAAIGTVKAEGGKILFGGEKLPNPGGCYITPCIAEVPGNLAIVREET
                     FAPVLYLMPYRTIEEAIALQNGVPQGLSSAIITNDQGESELFLSAAGSDCGLANVNTG
                     TSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRQTSAINFSGKVDWPRASRWSFDSVR
                     AMRRRPPPGGLLSVQPPLMRWMTFSTASSGMAVVS"
     gene            2784..3695
                     /locus_tag="VFV26_09770"
     CDS             2784..3695
                     /locus_tag="VFV26_09770"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4846495.1"
                     /translation="MNMDANLDLSQLRTFFTLAQAGSFTACARRLNRTQSAVSHAMAK
                     LESLAGVPLLDRRGRSLSLTEEGRRLYQACEQAFATLDAAAEDLKRHQTQARGRLRVG
                     ATVEFGSSILMRHMQPFLAAHPDLEIDFTLSQDLLSPLLRDDLDLIIDCQEHPLPALR
                     KSPLFRETYVVTCAPGLRKSHRLRVPADLTRCPILSLDKAGTWWNRFLMAVPDREQPH
                     LDRFIAVDHIRAMIHAAVEGMGAVLVPRYSVLGELERGDLVALFPAIRPAEDRFSIYQ
                     KKVKAAQEKQKLLTRYLQSLSPAEFGS"
BASE COUNT          655 a         1329 c         1184 g          606 t
ORIGIN      
        1 agatgacctg gggcaacgcc gaggccgacc tggagatgat gcaccagatg gcgcgcggcg
       61 agggcttcgg caaaatcgcc ggcctgggcg tgaagaagat gaaggagcac ttcatcaaga
      121 acggctgggg cgacccgcag ctcatcaacg acatcggcat ggagaacaag ggcctcgaat
      181 actcccaata catgtccaag gagtccctgg cccagcaggg cggctatgcg ctcaccaaca
      241 agggccccca gcacgacgaa gcctggctga tcttcatgga catggtgaac aagcagctgc
      301 ccaccttcga ggacaaggcc gaagcgctct actacttccc cctgttccgc acctggttcg
      361 gcctcaacgg cttctgcaag ctgccctgga acgacgtggt ccccgcggac aacgcctccc
      421 atcccgagcc ccacaaggtg cccgagcacg tgcagaacta cgtggacctc ttcagcgcca
      481 ccacgggcat ccagatcacc aaggaggacc tgatcgtcca gtccgccaag gtctacaact
      541 tccagcgcgt gttcaacatc cgcatgggca agggcctgcg cctgcacgac gccgcgccct
      601 accggtcgct gggcccggtg acgaaggaag aatacgaatc ccgcgccgaa cgctacgacc
      661 agcagatcgt caccgaaatg ggcctcgatc ccgccggcaa gagcaccgag gagaagatgg
      721 ccctccaccg cgagtggcgc acgggccgct tctccaagct catggacagc gtctacaccc
      781 gccggggctg gaccctggac ggcgtgccca ccctggcgcg cctgaaggag ctgggcctcg
      841 acgccttccc tgaggtggtg gaagtcgtga agcagcatct cggttgacct gctccggccg
      901 cgtcgcggcc ggagtatgga actgcataag gatggccatg atcctggtga acgaagaccc
      961 cctcgactgg cacgtgggca tgaccgtccg ggacgtgctt cgggcgaaga actaccgctt
     1021 ccccatgctg gtcatccacc tgaacgacgt gctggtgcag aagaaggact acgacaccac
     1081 ggccatcccc gacgaagccg tgctgaaggt catccacctc atcagcggag gctgaacgga
     1141 aagaaggccg cccggaggcg gccttcttcg catggcccgg acgctatcaa agctccagcg
     1201 tgatgccctg ggccagtcca ccttgccgct gaagttgatg gcgctggtct ggcggcgcat
     1261 gtaggccttc caggcgtcgg agccgctctc gcggccgccg ccggtctcct tctccccacc
     1321 gaaggcgccg ccgatctcgg ccccgctggt gcccgtgttc acgttggcca ggccgcagtc
     1381 gctgcccgcc gccgacagga acagctcgct ctcaccctgg tcgttcgtga tgatggcgct
     1441 ggaaaggccc tggggcacgc cattctggag ggcgatggcc tcctcgatgg tgcggtacgg
     1501 catcaggtag agcaccggcg cgaaggtctc ctcccgcacg atggccaggt tccccggcac
     1561 ctccgcgatg cagggcgtga tgtagcagcc gccggggttg ggcagcttct ccccgccaaa
     1621 gaggatcttc cccccttcgg ccttcacggt cccgatggcc gccagcatgg tctccacggc
     1681 gcccgcatcc accagggggc ccatgaggat ctcgtcctcg cgggggtcgc cgatgggggt
     1741 cctgcggtag aggtccagca ggcggtcccg gaaggtgccg tagatggact cgtggacgat
     1801 gacgcggcgg gtggaggtgc agcgctggcc ggaggtgccg atggcgccga agtagacgga
     1861 gcgcagcgcg atgtccaggt cgcccttctc gctgacgatg accgcgccgt tgccgcccag
     1921 ctccaggatg tggcgaccga agcgctcctg caccagcttc ccgacatggc ggccgcccgg
     1981 gaccgagccc gtgtaggaca ccagggccac gcgggggtcc gtgttgatga ggtcgccgat
     2041 gtcgctgccc ttgccgatgg ccaggctgca gatggcggga tcgtagccga agtcccgcag
     2101 caccttctcg gcgatcttcg tgcaggcgat ggcggtcagc ggcgtcttgg aggagggctt
     2161 ccacagcacc gtgtcgccgc acaccagggc cagggccgtg ttccagctcc acacggccac
     2221 ggggaaattg aacgcggtga tgacgcccac cacgcccagg gggtgccact gctcctggag
     2281 ccggtgcatg cgccgctcgc tgggcatggt gaggccgtag agctggcggg acaggcccac
     2341 ggcgaagtcg cagatgtcga tcatctcctg gacttcgccc aggccctcgc gcagggtctt
     2401 gcccatctcc agcgtgacca gctccgccag ggccgccttg ttccggcgca gttcgtcgcc
     2461 cagggccttc accacctcgc cgcgcttggg ggcgggcacc agcttccagg aggcgaaggc
     2521 cgcatggctc ctggccagga tggcgtcgaa ctcctggggt gtgacattca tgaccgtcgc
     2581 cagggcactg ccatcgatgg gggaggccac cgcctgggcc ttgccgcttc cagtccacgc
     2641 gcccgcgaac ccgcccggat tcacctctga aatacccagg gatttcagga cttcctgcat
     2701 ggcccacctc caggatccat ttgtatcttt ttttgcatca attacacaac tcattcgatt
     2761 cacacccagc atgaatatga ttcatgaaca tggatgccaa cctcgacctc tcccagctgc
     2821 gcaccttctt caccctggcc caggccggga gcttcaccgc ctgcgcccgc cgcctgaacc
     2881 gcacccagtc cgccgtcagc catgccatgg ccaagctgga aagcctcgcg ggggtgcccc
     2941 tgctggaccg ccggggccgc tccctctccc tgacggagga gggacggcgc ctctaccagg
     3001 cctgcgagca ggccttcgcc acccttgatg ccgcggcgga ggatctgaaa cgccaccaga
     3061 cccaggcccg cgggcgactc cgggtggggg ccacggtcga gttcggcagc agcatcctca
     3121 tgcggcacat gcagcccttc ctggccgccc acccggacct ggagatcgac ttcaccctga
     3181 gccaggatct gctcagcccc ctgctccgcg acgatctcga tctcatcatc gactgccagg
     3241 agcaccccct tcccgccctg cggaaatccc ccctcttccg ggagacctac gtggtgacct
     3301 gcgcccccgg gctgcggaag tcccatcgcc ttcgggtccc ggccgacctc acccgctgcc
     3361 cgatcctctc cctggacaag gccggcacct ggtggaaccg cttcctcatg gccgtgcccg
     3421 accgggagca gccccacctg gaccggttca tcgccgtgga ccacatccgg gccatgatcc
     3481 acgccgccgt ggagggcatg ggcgcggtgc tggtgccccg ctacagcgtg ctgggggagc
     3541 tggaacgggg cgacctcgtg gcgctcttcc ccgccatccg ccccgccgag gaccgcttct
     3601 ccatctacca gaagaaggtg aaggccgcgc aggagaagca gaagctgctc acgcggtacc
     3661 tgcagtcgtt gagtccggct gaattcggat cctaggctcc aaaccgcgtt gcggtttgga
     3721 gcatggctgc ccgcttcgcg ggcagcgtac aagccttcca aatgaccaca ggcc
//
